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Ecology and Evolutionary Biology

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Articles 2101 - 2130 of 2981

Full-Text Articles in Zoology

Integrating Resource Selection Into Spatial Capture-Recapture Models For Large Carnivores, K. M. Proffitt, Joshua F. Goldberg, Mark Hebblewhite, R. Russell, B. S. Jimenez, H. S. Robinson, K. Pilgrim, M. K. Schwartz Nov 2015

Integrating Resource Selection Into Spatial Capture-Recapture Models For Large Carnivores, K. M. Proffitt, Joshua F. Goldberg, Mark Hebblewhite, R. Russell, B. S. Jimenez, H. S. Robinson, K. Pilgrim, M. K. Schwartz

Wildlife Biology Faculty Publications

Wildlife managers need reliable methods to estimate large carnivore densities and population trends; yet large carnivores are elusive, difficult to detect, and occur at low densities making traditional approaches intractable. Recent advances in spatial capture-recapture (SCR) models have provided new approaches for monitoring trends in wildlife abundance and these methods are particularly applicable to large carnivores. We applied SCR models in a Bayesian framework to estimate mountain lion densities in the Bitterroot Mountains of west central Montana. We incorporate an existing resource selection function (RSF) as a density co-variate to account for heterogeneity in habitat use across the study area …


Métodos Cuantitativos Para La Conservación De Los Vertebrados, Michael J. Conroy, John P. Carroll, Juan Carlos Senar, Jeffrey J. Thompson Oct 2015

Métodos Cuantitativos Para La Conservación De Los Vertebrados, Michael J. Conroy, John P. Carroll, Juan Carlos Senar, Jeffrey J. Thompson

School of Natural Resources: Faculty Publications

Este libro es destinado para el uso por biólogos del campo y otras personas, incluso biólogos de campo en el futuro que podrían estar en un curso de la universidad y trabajando en estudios y conservación de animales. Nuestro objetivo es que los biólogos usen este libro como (haciendo apología a nuestro colega Evan Cooch) una “introducción suave” al campo de la ecología cuantitativa. Esperamos convencer a los lectores que los métodos y aproximaciones del libro no son solo para los matemáticos, estadísticos y programadores de computadoras, sino que de hecho son herramientas esenciales para practicar la conservación en el …


Spreading Holiday Spirit And Northwestern Salamanders, Ambystoma Gracile (Baird 1859) (Caudata: Ambystomatidae), Across The Usa, Michael R. Rochford, Jeffrey M. Lemm, Kenneth Krysko, Louis A. Somma, Robert W. Hansen, Frank J. Mazzotti Sep 2015

Spreading Holiday Spirit And Northwestern Salamanders, Ambystoma Gracile (Baird 1859) (Caudata: Ambystomatidae), Across The Usa, Michael R. Rochford, Jeffrey M. Lemm, Kenneth Krysko, Louis A. Somma, Robert W. Hansen, Frank J. Mazzotti

Papers in Herpetology

Introduced species of amphibians and reptiles are of growing conservation concern (Bury and Luckenbach 1976; Krysko et al. 2011; Meshaka 2011). Unintentional introductions result largely from individuals escaping from enclosures or hitch-hiking in cargo or on vehicles, whereas intentional introductions occur primarily because a species is perceived to be of value to humans or from deliberately releasing sick or unwanted animals, including pets (Kraus 2009; Krysko et al. 2011). In Florida, most known introductions are directly related to the pet trade, but about 12% are related to the cargo pathway (Krysko et al. 2011). In this paper, we report the …


At Home And At Large In The Great Plains: Essays And Memories, Paul A. Johnsgard Jul 2015

At Home And At Large In The Great Plains: Essays And Memories, Paul A. Johnsgard

Zea E-Books Collection

This volume presents fourteen essays (some updated) that originally appeared in Prairie Fire, a monthly free newspaper that for seven years (as of 2015) has carried important messages of social, environmental, and economic issues in a mature and nonpartisan manner to tens of thousands of residents of Nebraska, western Iowa, eastern Colorado, and southern South Dakota, and by mail to subscribers in the rest of the world. These essays discuss the North American east-west ecological boundaries, spring migration events, birds at the bird feeder, feathered survivors of a glacial past, the threatened sharp-tailed grouse of Nebraska and South Dakota, and …


Seasonal Dynamics And Micro-Climatic Preference Of Two Alpine Endemic Hypogean Beetles, Stefano Mammola, Elena Piano, Pier Mauro Giachino, Marco Isaia Jun 2015

Seasonal Dynamics And Micro-Climatic Preference Of Two Alpine Endemic Hypogean Beetles, Stefano Mammola, Elena Piano, Pier Mauro Giachino, Marco Isaia

International Journal of Speleology

Hypogean beetles generally live in stable environments, characterized by constant temperature and high relative humidity. Changes in the underground microclimatic conditions generally induce local migrations of the beetles through the hypogean environment in search of suitable microhabitats. We studied the seasonal dynamics and the micro-climatic preference of two Alpine endemic hypogean beetles - Sphodropsis ghilianii (Coleoptera, Carabidae) and Dellabeffaella roccae (Coleoptera, Cholevidae) - in the hypogean complex of Pugnetto (Graian Alps, Italy). We surveyed the two species for one year, using baited pitfall traps and measuring temperature and humidity along the two main caves. We used logistic regression mixed models …


Distributional Expansion Of The Hispid Cotton Rat (Sigmodon Hispidus) Into Dawson County, Nebraska, Jennifer D. Frisch, Keith Geluso, Joseph T. Springer May 2015

Distributional Expansion Of The Hispid Cotton Rat (Sigmodon Hispidus) Into Dawson County, Nebraska, Jennifer D. Frisch, Keith Geluso, Joseph T. Springer

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

In the last century, the Hispid Cotton Rat (Sigmodon hispidus) has moved northward in central parts of the United States, reaching Nebraska in the late 1950s. Recent surveys demonstrate Hispid Cotton Rats inhabit counties across southern parts of Nebraska south of the Platte River. Herein, we report on captures of S. hispidus from a new county (Dawson County), its seasonal occurrence at our study site, and the first known record of the Hispid Cotton Rat north of channels of the Platte River. Our captures represent one of the northern-most records in Nebraska.


Effects Of Pre-Release Physical Stressors On Post-Release Success Of Hatchery-Reared Spotted Seatrout, Taylor Westbrook Guest May 2015

Effects Of Pre-Release Physical Stressors On Post-Release Success Of Hatchery-Reared Spotted Seatrout, Taylor Westbrook Guest

Master's Theses

Alteration of habitat associated with coastal development and increased demand for food and recreation can result in the depletion of fisheries resources such as the Spotted Seatrout (Cynoscion nebulosus), the Gulf of Mexico’s most popular recreational fish. Stock enhancement, or the release of cultured fish to supplement wild populations, is one potential tool for managing important fisheries resources. Although much effort has gone into marine stock enhancement, the effectiveness of stocking is not well established, and techniques for ensuring success have not been developed. Although the basic biology of the Spotted Seatrout is well known, comparatively little is known about …


A Systematic Review Of The Soricimorph Eulipotyphla (Soricidae: Mammalia) From The Gray Fossil Site (Hemphillian), Tennessee, Joshua Doby May 2015

A Systematic Review Of The Soricimorph Eulipotyphla (Soricidae: Mammalia) From The Gray Fossil Site (Hemphillian), Tennessee, Joshua Doby

Electronic Theses and Dissertations

Due in part to the incompleteness of the Cenozoic fossil record in the eastern U.S., the evolution and immigration of shrews (Soricidae) is not well understood. A rich soricid fauna from the Gray Fossil Site (GFS), Washington County, TN, has enabled many new inferences to be made. There are 7 new species in 6 genera: Paenelimnoecus, “Blarinella”, Petenyia, Tregosorex, Crusafontina, and Gen et sp. nov. GFS species of the genera Paenelimnoecus, “Blarinella”, and Petenyia are the first occurrence of each genus in the New World. Tregosorex, Crusafontina, and the N.A. taxon Limnoecus all have their latest documented occurrence at the …


Two New Euscorpius Species From Central-Western Greece (Scorpiones: Euscorpiidae), Gioele Tropea, Victor Fet Apr 2015

Two New Euscorpius Species From Central-Western Greece (Scorpiones: Euscorpiidae), Gioele Tropea, Victor Fet

Euscorpius

Two new Euscorpius species are described, based on specimens collected by P.M. Giachino & D. Vailati in central-western Greece in neighboring Aitoloakarnania (Western Greece) and Fokida (Central Greece) regional units. No Euscorpius specimens were previously available from this area. The first new species, Euscorpius giachinoi sp. n., is very similar to a recently described E. birulai Fet et al., 2014 from Euboea Island, and is also characterized by a low trichobothrial count (Pv = 7, et = 5), a low pectinal teeth count (Dp = 7 in males, 6 in females), and long-limbed features. The second species, …


Manipulation Of Same Sex Social Pair Bonds In Budgerigars, Melopsittacus Undulatus, Amanda M. Stilwell Apr 2015

Manipulation Of Same Sex Social Pair Bonds In Budgerigars, Melopsittacus Undulatus, Amanda M. Stilwell

Undergraduate Distinction Papers

Same sex pair bonding can be found throughout various animal species. These relationships can be common in monogamous species, especially when there is a lack of members of the opposite sex. Budgerigars, Melopsittacus undulatus, are a socially monogamous species, which create strong pair bonds but are also known to engage in extra pair copulations. When looking at an all-male flock of budgerigars, the question arises, are these bonds easily broken or disrupted by a third party individual. After determining seven pair bonds in a flock of 32 males, these pairs were removed from an aviary and placed in separate …


Isotopic Incorporation Rates And Discrimination Factors In Mantis Shrimp Crustaceans., Maya Devries, Carlos Del Rio, Tate Tunstall, Todd Dawson Apr 2015

Isotopic Incorporation Rates And Discrimination Factors In Mantis Shrimp Crustaceans., Maya Devries, Carlos Del Rio, Tate Tunstall, Todd Dawson

Faculty Publications, Biological Sciences

Stable isotope analysis has provided insights into the trophic ecology of a wide diversity of animals. Knowledge about isotopic incorporation rates and isotopic discrimination between the consumer and its diet for different tissue types is essential for interpreting stable isotope data, but these parameters remain understudied in many animal taxa and particularly in aquatic invertebrates. We performed a 292-day diet shift experiment on 92 individuals of the predatory mantis shrimp, Neogonodactylus bredini, to quantify carbon and nitrogen incorporation rates and isotope discrimination factors in muscle and hemolymph tissues. Average isotopic discrimination factors between mantis shrimp muscle and the new diet …


Fauna Census Of Intertidal Cliffs, Mangapwani, Zanzibar, Emily Jankowski Apr 2015

Fauna Census Of Intertidal Cliffs, Mangapwani, Zanzibar, Emily Jankowski

Independent Study Project (ISP) Collection

Due to their extreme variations in condition over the course of a day, intertidal zones are challenging environments. Organisms that live there must be prepared to cope with both exposure and submersion, not to mention the temperature variations that accompany these conditions. The differing tolerances and adaptations of various organisms to these conditions generally cause patterns of vertical zonation to occur in the intertidal zone, especially when the shore is steep and rocky. Understanding the ecology of shore environments is important to future conservation and management efforts. This study was conducted on a beach in Mangapwani, Zanzibar at at 6˚ …


The Behavioral Causes Of Reproductive Skew In Cooperatively Polygynandrous Acorn Woodpeckers (Melanerpes Formicivorus), Anna C. Brownson Apr 2015

The Behavioral Causes Of Reproductive Skew In Cooperatively Polygynandrous Acorn Woodpeckers (Melanerpes Formicivorus), Anna C. Brownson

Biological Sciences Theses & Dissertations

Reproductive skew, the degree to which reproduction is shared among same-sex individuals in a social group, is a pattern affected by ecological conditions, sociality, cooperation, and the inter- and intrasexual behavior of individuals in complex animal societies. Transactional and compromise skew models assume that high skew is the product of dominance hierarchies among cobreeders, yet this has rarely been tested. Both model types fail to incorporate the decisions of more than two individuals, generally overlooking the effect of female behavior on male reproductive success in multi-male groups, and are ineffective at predicting skew in larger groups characterized by more than …


A Comparison Of The Genetic Diversity Of The Class Ii Major Histocompatibility Complex In Ex Situ And In Situ Populations Of African Penguins (Spheniscus Demersus), Emily Willmer Apr 2015

A Comparison Of The Genetic Diversity Of The Class Ii Major Histocompatibility Complex In Ex Situ And In Situ Populations Of African Penguins (Spheniscus Demersus), Emily Willmer

Undergraduate Honors Thesis Projects

As an endangered species, the African penguin (Spheniscus demersus) is at risk of becoming extinct in the wild due to destruction of their coastal habitat and reduction in food availability. The development of a genetically diverse and healthy captive population is important in helping to conserve the species. The goal of this project was to determine the genetic diversity of the class II major histocompatibility complex (MHC) of a wild population of African penguins and compare it to the diversity of the captive population at Mystic Aquarium in Mystic, Connecticut that has previously been studied. We found that …


Tallgrass Prairie Vegetation Response To Spring Fires And Bison Grazing, Stephen L. Winter, Brady W. Allred, Karen R. Hickman, Samuel D. Fuhlendorf Mar 2015

Tallgrass Prairie Vegetation Response To Spring Fires And Bison Grazing, Stephen L. Winter, Brady W. Allred, Karen R. Hickman, Samuel D. Fuhlendorf

School of Natural Resources: Faculty Publications

Spring fires in tallgrass prairie can create environmental conditions conducive to plant growth in the subsequent growing season. Following fires, burned areas can also be attractive to grazing animals such as bison (Bison bison). Sustained grazing activity within recently burned areas can alter vegetation structure relative to nearby landscape patches that haven’t burned recently. In 2007, we collected data on bison grazing activity, vegetation structure, and the growth and reproduction of a perennial forb, Arnoglossum plantagineum, in Oklahoma tallgrass prairie. We compared these variables in landscape patches that had burned in the spring of 2007 to measurements …


Observational Learning In The Jumping Spider Phidippus Audax, Robert M. Adams Mar 2015

Observational Learning In The Jumping Spider Phidippus Audax, Robert M. Adams

School of Biological Sciences: Dissertations, Theses, and Student Research

Observational learning is a complex form of learning most frequently studied in social vertebrates. However, evidence for social learning exists in several invertebrate species Evidence of invertebrate observational learning also exists, though to a lesser extent. This study addresses observational learning in a jumping spider (Phidippus audax) through video playback. My results suggest that while observational learning is occurring, the exact mechanism in use remains unclear. Spiders that saw a conspecific satiate itself on a prey item readily attacked a similar prey item when exposed to a live prey item. However, spiders exposed to a conspecific rejecting or …


Evolution Of Bat-Trypanosome Associations And The Origins Of Chagas Disease, Christian Miguel Pinto Feb 2015

Evolution Of Bat-Trypanosome Associations And The Origins Of Chagas Disease, Christian Miguel Pinto

Dissertations, Theses, and Capstone Projects

Trypanosoma cruzi is a genetically diverse parasite that causes Chagas disease, one of the most important zoonoses in the Americas. This generalist parasite of mammals belongs to a clade mostly comprised of bat parasites, the T. cruzi clade. The origins (i.e., biogeographic history and evolution of hosts associations) of this parasite are far from being understood, and the main areas that need further study are: species limits within T. cruzi sensu lato, further studies on the diversity of T. cruzi clade members and their hosts, and research on adaptations of the hosts to trypanosome infections. In this dissertation I explore …


A Long-Term Investigation Of The Federally Threatened Desert Tortoise (Gopherus Agassizii) At A Wind Energy Facility In Southern California, Mirza Mickey Agha Jan 2015

A Long-Term Investigation Of The Federally Threatened Desert Tortoise (Gopherus Agassizii) At A Wind Energy Facility In Southern California, Mirza Mickey Agha

Theses and Dissertations--Forestry and Natural Resources

With the recent increase in utility-scale wind energy development and current climate variation in the desert southwest US, researchers have become increasingly concerned with the reaction of wildlife and critical habitat. Understanding the relationships among monitoring efforts, climate, industrial landscapes and wildlife is critical to effective management. Given the need for information available on how these potential stressors affect terrestrial wildlife, my objective was to determine how climate variation, wind energy facilities (WEF) and monitoring efforts by researchers influence behavior and survivorship in a population of the federally threatened desert tortoise (Gopherus agassizii). Data were collected via surveys, …


Observations Of Hippopotamus H. Amphibius In The Little Scarcies River Of Sierra Leone And Arguments For Their Conservation Based On Roles They Play In Riverine Grasslands And Nutrient Loading, Lindsey R. Perry Jan 2015

Observations Of Hippopotamus H. Amphibius In The Little Scarcies River Of Sierra Leone And Arguments For Their Conservation Based On Roles They Play In Riverine Grasslands And Nutrient Loading, Lindsey R. Perry

Dissertations, Master's Theses and Master's Reports

A small population of Hippopotamus amphibius remains in Sierra Leone and conservation efforts may be needed to support the Hippos and their indirect benefits to fisheries and grassland production. The hippo is a known ecosystem engineer, and a potentially important contributor of nutrients to the river systems they inhabit supporting the food web and local fisheries. In this study I observed hippos in the Little Scarcies River and uplands of the Outamba-Kilimi National Park to estimate their numbers and ultimately their potential input of nutrients into the river. Hippos forage at night in grasslands neighboring rivers, removing up to 3.62 …


Hymenolepis Folkertsi N. Sp. (Eucestoda: Hymenolepididae) In The Oldfield Mouse Peromyscus Polionotus (Wagner) (Rodentia: Cricetidae: Neotominae) From The Southeastern Nearctic With Comments On Tapeworm Faunal Diversity Among Deer Mice, Arseny A. Makarikov, Todd N. Nims, Kurt E. Galbreath, Eric P. Hoberg Jan 2015

Hymenolepis Folkertsi N. Sp. (Eucestoda: Hymenolepididae) In The Oldfield Mouse Peromyscus Polionotus (Wagner) (Rodentia: Cricetidae: Neotominae) From The Southeastern Nearctic With Comments On Tapeworm Faunal Diversity Among Deer Mice, Arseny A. Makarikov, Todd N. Nims, Kurt E. Galbreath, Eric P. Hoberg

Harold W. Manter Laboratory of Parasitology: Faculty Publications

A previously unrecognized species of hymenolepidid cestode attributable to Hymenolepis is described based on specimens in Peromyscus polionotus, oldfield mouse, from Georgia, United States, near the southeastern coast of continental North America. Specimens of Hymenolepis folkertsi n. sp. differ from those attributed to most other species in the genus by having testes arranged in a triangle and a scolex with a prominent rostrum-like protrusion. The newly recognized species is further distinguished by the relative position and length of the cirrus sac, shape of seminal receptacle, and relative size of external seminal vesicle and seminal receptacle. Hymenolepidid cestodes have sporadically …


Trophic Interactions In A Semiaquatic Snake Community: Insights Into The Structure Of A Floodplain Food Web, Cynthia M. Carter Jan 2015

Trophic Interactions In A Semiaquatic Snake Community: Insights Into The Structure Of A Floodplain Food Web, Cynthia M. Carter

Masters Theses

Food webs provide a useful conceptual framework for evaluating the relationships that exist within ecological systems. Characterizing the interactions within these webs can improve our understanding of how communities are structured and what mechanisms stabilize them. Untangling these interactions can be an intractable problem in complex systems and insights gained from conventional methods are often accompanied by inherent sources of bias. This study used stable isotope analysis, an alternative to traditional methods, to investigate the roles and relative contributions of consumers at the top of a food web to community structure and stability. I compared the niche parameters of five …


Provisioning And Its Effects On The Social Interactions Of Tibetan Macaques (Macaca Thibetana) At Mt. Huangshan, China, Brianna I. Schnepel Jan 2015

Provisioning And Its Effects On The Social Interactions Of Tibetan Macaques (Macaca Thibetana) At Mt. Huangshan, China, Brianna I. Schnepel

All Master's Theses

The dispersal patterns of food resources has a significant effect on the composition of primate groups and social interactions within those groups. Humans often alter the dispersal of food. Non-humans often use affiliative behaviors to elicit tolerance or support from other group members. I investigated whether provisioned food resources alter the social interactions and group dynamics of Macaca thibetana. All-occurrence sampling and scan sampling were used for data recorded by camera traps. Trail-cameras were placed at six locations that contain natural and human food resources and recorded 60-second videos. Social behavior and proximity of the monkeys were recorded. I …


Fate Of Captive-Reared Bobwhite Quail Released In Central Kentucky, Adam Carter Jan 2015

Fate Of Captive-Reared Bobwhite Quail Released In Central Kentucky, Adam Carter

Online Theses and Dissertations

The fate of pen-raised bobwhite quail (Colinus virginianus) released onto two farms (Site 1 and 2) and a reclaimed coal surface mine (Site 3) in south-central Kentucky during the summers of 2008 and 2009 was assessed. Of the 57 bobwhite quail radio-tagged and released in this study, the fate of 26 (45%) was unknown because the telemetry signal was lost and the birds could not be located. Within 34 days after release, mortality of the remaining 31 radio-tagged birds was 100%. Raptors, coyotes, and mesomammal predators were responsible for most (84%) of the identified quail mortality; accounting for the deaths …


Offspring Retrieval Behaviors After Brood Loss In The Convict Cichlid, Heather Witherspoon Govert Jan 2015

Offspring Retrieval Behaviors After Brood Loss In The Convict Cichlid, Heather Witherspoon Govert

Online Theses and Dissertations

Parents provide care for their young in several different ways. One of these is searching for and retrieving any young that may become displaced from their nest. In monogamous biparental species, parents may share care of their young, including retrieval efforts. Convict cichlids (Amatitlania siquia) are an example of a monogamous biparental fish that show shared parental care of young. In the wild, these cichlids defend nests and search for missing young in response to complete or catastrophic brood loss. This retrieval behavior is important for both parents because parents, especially the males, have been observed to abandon their mate …


Ramapough/Ford The Impact And Survival Of An Indigenous Community In The Shadow Of Ford Motor Company’S Toxic Legacy, Chuck Stead Jan 2015

Ramapough/Ford The Impact And Survival Of An Indigenous Community In The Shadow Of Ford Motor Company’S Toxic Legacy, Chuck Stead

Antioch University Dissertations & Theses

The purpose of this study was to examine the history of the Ford Motor Company’s impact upon the Ramapo Watershed of New York and New Jersey, as well as upon the Ramapough Munsi Nation, an indigenous population living there. In a 25 year span the automaker produced a record number of vehicles and dumped a massive amount of lead paint, leaving behind a toxic legacy that continues to plaque the area and its residents. The Ramapough people are not unlike many native nations living in the United States who have experienced industrial excess. This study examines the mindset that allows …


The Non-Lethal Effects Of Climate Change On The Territoriality Of Lottia Gigantea, Tracey Gunanto, Christina Chavez, Jessica Martinez, William G. Wright Dec 2014

The Non-Lethal Effects Of Climate Change On The Territoriality Of Lottia Gigantea, Tracey Gunanto, Christina Chavez, Jessica Martinez, William G. Wright

Student Scholar Symposium Abstracts and Posters

The intertidal zone has been described as ground zero for global warming. Here, the owl limpet, Lottia gigantea, adapted to the cool ocean temperatures, must withstand a few hours of baking sun during day-time low tides. This hardship is predicted to increase in frequency and severity in the future as the globe warms. Our research hypothesized that heat events compromise territorial behavior of L. gigantea. All observations and experiments were performed at Inspiration Point near Newport Beach, California. We measured the natural radiant temperature of tagged limpets during day-time low tides using a field-calibrated infrared “thermogun”. We also …


New Observations Of The Andean Ibis (Theristicus Branickii, Threskiornithidae): Distribution, Movements, And Behavior Near Volcán Antisana, Benjamin West Dec 2014

New Observations Of The Andean Ibis (Theristicus Branickii, Threskiornithidae): Distribution, Movements, And Behavior Near Volcán Antisana, Benjamin West

Independent Study Project (ISP) Collection

The Andean Ibis (Theristicus branickii) of the highland grasslands of Ecuador, Peru, and Bolivia is listed globally as Near Threatened and Critically Endangered in Ecuador. The Ecuadorian population is estimated at 100 individuals and is restricted to the vicinities of Volcán Antisana and Volcán Cotopaxi. Knowledge of the nesting biology of the Andean Ibis in Ecuador consists of a single filming in 1989. Much of its general ecology and movements is also unknown. The purpose of this study was to find evidence of nesting ibis in Ecuador while also collecting data on behavior, population, movements and interspecific interactions. Data was …


Comparative Genomics Reveals Insights Into Avian Genome Evolution And Adaptation, Guojie Zhang, Cai Li, Qiye Li, Bo Li, Dennis M. Larkin, Chul Lee, Jay F. Storz, Agostinho Antunes, Matthew J. Greenwold, Robert W. Meredith, Anders Ödeen, Jie Cui, Qi Zhou, Luohao Xu, Hailin Pan, Zongji Wang, Lijun Jin, Pei Zhang, Haofu Hu, Wei Yang, Jiang Hu, Jin Xiao, Zhikai Yang, Yang Liu, Qiaolin Xie, Hao Yu, Jinmin Lian, Ping Wen, Fang Zhang, Hui Li, Yongli Zeng, Zijun Xiong, Shiping Liu, Long Zhou, Zhiyong Huang, Na An, Jie Wang, Quimei Zheng, Yingqi Xiong, Guangbiao Wang, Bo Wang, Jingjing Wang, Yu Fan, Rute R. Da Fonseca, Alonzo Alfaro-Núñez, Mikkel Schubert, Ludovic Orlando, Tobias Mourier, Jason T. Howard, Ganeshkumar Ganapathy, Andreas Pfenning, Osceola Whitney, Miriam V. Rivas, Erina Hara, Julia Smith, Marta Farré, Jitendra Narayan, Gancho Slavov, Michael N. Romanov, Rui Borges, João Paulo Machado, Imran Khan, Mark S. Springer, John Gatesy, Federico G. Hoffmann, Juan C. Opazo, Olle Håstad, Roger H. Sawyer, Heebal Kim, Kyu-Won Kim, Hyeon Jeong Kim, Seoae Cho, Ning Li, Yinhua Huang, Michael W. Bruford, Xiangjiang Zhan, Andrew Dixon, Mads F. Bertelsen, Elizabeth Derryberry, Wesley Warren, Richard K. Wilson, Shengbin Li, David A. Ray, Richard E. Green, Stephen J. O'Brien, Darren Griffin, Warren E. Johnson, David Haussler, Oliver A. Ryder, Eske Willerslev, Gary R. Graves, Per Alström, Jon Fjeldså, David P. Mindell, Scott V. Edwards, Edward L. Braun, Carsten Rahbek, David W. Burt, Peter Houde, Yong Zhang, Huanming Yang, Jian Wang, Avian Genome Consortium, Erich D. Jarvis, M. Thomas P. Gilbert, Jun Wang Dec 2014

Comparative Genomics Reveals Insights Into Avian Genome Evolution And Adaptation, Guojie Zhang, Cai Li, Qiye Li, Bo Li, Dennis M. Larkin, Chul Lee, Jay F. Storz, Agostinho Antunes, Matthew J. Greenwold, Robert W. Meredith, Anders Ödeen, Jie Cui, Qi Zhou, Luohao Xu, Hailin Pan, Zongji Wang, Lijun Jin, Pei Zhang, Haofu Hu, Wei Yang, Jiang Hu, Jin Xiao, Zhikai Yang, Yang Liu, Qiaolin Xie, Hao Yu, Jinmin Lian, Ping Wen, Fang Zhang, Hui Li, Yongli Zeng, Zijun Xiong, Shiping Liu, Long Zhou, Zhiyong Huang, Na An, Jie Wang, Quimei Zheng, Yingqi Xiong, Guangbiao Wang, Bo Wang, Jingjing Wang, Yu Fan, Rute R. Da Fonseca, Alonzo Alfaro-Núñez, Mikkel Schubert, Ludovic Orlando, Tobias Mourier, Jason T. Howard, Ganeshkumar Ganapathy, Andreas Pfenning, Osceola Whitney, Miriam V. Rivas, Erina Hara, Julia Smith, Marta Farré, Jitendra Narayan, Gancho Slavov, Michael N. Romanov, Rui Borges, João Paulo Machado, Imran Khan, Mark S. Springer, John Gatesy, Federico G. Hoffmann, Juan C. Opazo, Olle Håstad, Roger H. Sawyer, Heebal Kim, Kyu-Won Kim, Hyeon Jeong Kim, Seoae Cho, Ning Li, Yinhua Huang, Michael W. Bruford, Xiangjiang Zhan, Andrew Dixon, Mads F. Bertelsen, Elizabeth Derryberry, Wesley Warren, Richard K. Wilson, Shengbin Li, David A. Ray, Richard E. Green, Stephen J. O'Brien, Darren Griffin, Warren E. Johnson, David Haussler, Oliver A. Ryder, Eske Willerslev, Gary R. Graves, Per Alström, Jon Fjeldså, David P. Mindell, Scott V. Edwards, Edward L. Braun, Carsten Rahbek, David W. Burt, Peter Houde, Yong Zhang, Huanming Yang, Jian Wang, Avian Genome Consortium, Erich D. Jarvis, M. Thomas P. Gilbert, Jun Wang

Jay F. Storz Publications

Birds are the most species-rich class of tetrapod vertebrates and have wide relevance across many research fields. We explored bird macroevolution using full genomes from 48 avian species representing all major extant clades. The avian genome is principally characterized by its constrained size, which predominantly arose because of lineage-specific erosion of repetitive elements, large segmental deletions, and gene loss. Avian genomes furthermore show a remarkably high degree of evolutionary stasis at the levels of nucleotide sequence, gene synteny, and chromosomal structure. Despite this pattern of conservation, we detected many non-neutral evolutionary changes in protein-coding genes and noncoding regions. These analyses …


New Study Of Altitude And Butterfly Diversity Evaluation Of Butterfly Diversity In La Hesperia And Influence Of Altitude On Diversity, Savannah Artusi Dec 2014

New Study Of Altitude And Butterfly Diversity Evaluation Of Butterfly Diversity In La Hesperia And Influence Of Altitude On Diversity, Savannah Artusi

Independent Study Project (ISP) Collection

Due to the increasing effects of climate change, studies focusing on bioindicator species are becoming more necessary than ever. Additionally, knowledge about global biodiversity can be very useful to conservation organizations because it helps them determine what areas need to be conserved the most .Butterflies are useful as bioindicators due to their complex life cycles, importance in the food chain, and sensitivity to environmental changes. This project focused on studying the overall biodiversity of butterflies in the La Hesperia reserve. In addition, this study aimed to determine how butterfly diversity varies at different altitudes. To do this, the reserve was …


Natural Infections Of Tetrathyridia Of Mesocestoides Species In Deer Mice, Peromyscus Maniculatus, From New Mexico, John E. Ubelaker, Nora Abdullah, Aya Mouhaffel, Rashmi Ananadampillair, Caitlyn Emigh, Scott Lyell Gardner Sep 2014

Natural Infections Of Tetrathyridia Of Mesocestoides Species In Deer Mice, Peromyscus Maniculatus, From New Mexico, John E. Ubelaker, Nora Abdullah, Aya Mouhaffel, Rashmi Ananadampillair, Caitlyn Emigh, Scott Lyell Gardner

Papers in Parasitology

At Southern Methodist University campus about 6 miles south of Taos, New Mexico, we recovered tetrathyridia of Mesocestoides in five Peromyscus maniculatus in the summers of 2008 (3 of 129, 0.023%), 2009 (0 of 98, 0%), 2010 (1 of 112, 0.008%), 2011 (0 of 88, 0%), and 2012 (1 of 86, 0.011%). Tetrathyridia from the body cavity of one of the five infected mice were injected into the peritoneal cavity of laboratory white mice, Mus musculus. Our later examination of the laboratory mice revealed heavy infections of tetrathyridia continuing to reproduce asexually. Here we provide important new information on …