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Ecology and Evolutionary Biology

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Articles 1981 - 2010 of 2982

Full-Text Articles in Zoology

Long-Term Monitoring And Recovery Of A Population Of Alligator Snapping Turtles, Macrochelys Temminckii (Testudines: Chelydridae), From A Northeastern Arkansas Stream, S. E. Trauth, D. S. Siegel, M. L. Mccallum, D. H. Jamieson, A. Holt, J. B. Trauth, H. Hicks, J. W. Stanley, J. Elston, J. J. Kelly, J. D. Konvalina Jan 2016

Long-Term Monitoring And Recovery Of A Population Of Alligator Snapping Turtles, Macrochelys Temminckii (Testudines: Chelydridae), From A Northeastern Arkansas Stream, S. E. Trauth, D. S. Siegel, M. L. Mccallum, D. H. Jamieson, A. Holt, J. B. Trauth, H. Hicks, J. W. Stanley, J. Elston, J. J. Kelly, J. D. Konvalina

Journal of the Arkansas Academy of Science

We conducted a mark-recapture study of Alligator Snapping Turtles, Macrochelys temminckii, on Salado Creek (Independence Co., Arkansas) during 10 trapping seasons, which spanned a 20-year period (1995–2015). We trapped a total of 163 Alligator Snapping Turtles during 416 trap nights and recorded a total of 35 recaptures during this study. Both the catch per unit effort (CPUE) and Jolly-Seber approaches demonstrated that this population benefitted from removal of harvest pressure, thus leading to an increase in abundance of Alligator Snapping Turtles in the lower ~5 km of the creek. The CPUE averaged slightly greater than 0.24 (317 trap nights) during …

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Gastrointestinal Parasites Of The Northern River Otter, Lontra Canadensis (Carnivora: Mustelidae), From Arkansas, C. T. Mcallister, A. Surf, R. Tumlison, C. R. Bursey, T. J. Fayton Jan 2016

Gastrointestinal Parasites Of The Northern River Otter, Lontra Canadensis (Carnivora: Mustelidae), From Arkansas, C. T. Mcallister, A. Surf, R. Tumlison, C. R. Bursey, T. J. Fayton

Journal of the Arkansas Academy of Science

No abstract provided.

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Genetic Structure And Connectivity Of The Endangered Giant Kangaroo Rat (Dipodomys Ingens) In A Heterogeneous Environment, Nathan Alexander Jan 2016

Genetic Structure And Connectivity Of The Endangered Giant Kangaroo Rat (Dipodomys Ingens) In A Heterogeneous Environment, Nathan Alexander

Cal Poly Humboldt theses and projects

Movement ecology and dispersal are important aspects of species’ life histories that can inform conservation and management. Dispersal is often cryptic and difficult to detect, but recent advances genetic technology and applications have provided new approaches to identifying and describing dispersal patterns. Giant kangaroo rats (Dipodomys ingens) are an endangered heteromyid that appear to persist in small subpopulations in a heterogeneous environment of their northern range, the Ciervo-Panoche Natural Area, California. Previous work suggested high levels of genetic diversity between populations with genetic distances not being correlated to geographic distances. Here, I identified landscape population structure through clustering …

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Testing The Forage Preference Of The American Pika (Ochotona Princeps) For Use In Connectivity Corridors In The Washington Cascades, Carly Wickhem, Kristina Ernest Jan 2016

Testing The Forage Preference Of The American Pika (Ochotona Princeps) For Use In Connectivity Corridors In The Washington Cascades, Carly Wickhem, Kristina Ernest

All Master's Theses

One of the aims of the Snoqualmie Pass East Project (SPEP) in the Cascades of central Washington is to construct nearly 30 wildlife crossing structures along a 15-mile stretch of Interstate-90. American pikas (Ochotona princeps) are being monitored for the SPEP because they have specific habitat requirements and are poor dispersers. Making the crossing structures “pika-friendly” will encourage these low-mobility animals to use the structures. Recent research suggests that the presence of quality vegetation may help pika populations avoid declines and extirpations, so planting suitable forage within and adjacent to the crossings will be essential. During the summer …

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Animal Suffering Calls For More Than A Bigger Cage, Simon R. B. Leadbeater Jan 2016

Animal Suffering Calls For More Than A Bigger Cage, Simon R. B. Leadbeater

Animal Sentience

Ng (2016) argues for incremental welfare biology partly because it would be impossible to demonstrate conclusively that animals are sentient. He argues that low cost changes in industrial practices and working collaboratively may be more effective in advancing animal welfare than more adversarial approaches. There is merit in some of Ng’s recommendations but a number of his arguments are, in my view, misdirected. The fact that nonhuman animals feel has already been adequately demonstrated. Cruelty to animals is intrinsic to some industries, so the only way to oppose it is to oppose the industry.

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Ecology Of Two Reintroduced Black Bear Populations In The Central Appalachians, Sean Mccarthy Murphy Jan 2016

Ecology Of Two Reintroduced Black Bear Populations In The Central Appalachians, Sean Mccarthy Murphy

Theses and Dissertations--Animal and Food Sciences

Reintroduced populations are vulnerable to demographic and environmental stochasticity, deleterious genetic effects, and reduced population fitness, all of which can increase extinction probability. Population viability is principle to determining the status of reintroduced populations and for guiding management decisions. To attempt to reestablish black bear (Ursus americanus) populations in the central Appalachians, two reintroductions using small founder groups occurred during the 1990s in the Big South Fork area along the Kentucky-Tennessee border (BSF) and in the Jefferson National Forest along the Kentucky-Virginia border (KVP). My objectives were to estimate demographic and genetic parameters, and to evaluate long-term viability …

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The Small Mammals Of Southeastern Virginia As Revealed By Pitfall Trapping, Robert K. Rose Jan 2016

The Small Mammals Of Southeastern Virginia As Revealed By Pitfall Trapping, Robert K. Rose

Biological Sciences Faculty Publications

Pitfall trapping is a poor method to catch small mammals but the only way to catch and study the Southeastern Shrew (Sorex longirostris), the primary mammal of interest in the field studies reported here. While learning much about its distribution and abundance, still more was learned about the other small mammals present in forests and fields of eastern Virginia. A total of 15 species was captured at 19 locations during the 1990-2013 period, including five shrews, two moles, and eight rodents, representing all but one of the common small mammals in eastern Virginia.

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Sentience And Animal Welfare: Affirming The Science And Addressing The Skepticism, Nancy Clarke Jan 2016

Sentience And Animal Welfare: Affirming The Science And Addressing The Skepticism, Nancy Clarke

Animal Sentience

Broom’s (2014) book is a well-researched and thoroughly written exploration and evaluation of the journey from the origins of animal welfare science to what we can say we now know and need to consider in relation to animal sentience and welfare. This book will help to counter any skepticism among academics and policy makers.

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Cognitive Evidence Of Fish Sentience, Jonathan Balcombe Jan 2016

Cognitive Evidence Of Fish Sentience, Jonathan Balcombe

Animal Sentience

I present a little-known example of flexible, opportunistic behavior by a species of fish to undermine Key’s (2016) thesis that fish are unconscious and unable to feel. Lack of a cortex is flimsy grounds for denying pain to fish, for on that criterion we must also then deny it to all non-mammals, including birds, which goes against scientific consensus. Notwithstanding science’s fundamental inability to prove anything, the precautionary principal dictates that we should give the benefit of the doubt to fish, and the state of the oceans dictates that we act on it now.

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Mediating Claims Through Critical Anthropomorphism, Gordon Burghardt Jan 2016

Mediating Claims Through Critical Anthropomorphism, Gordon Burghardt

Animal Sentience

Key’s (2016) discussion of his claim that fish do not feel pain ignores the history of attempts to study the attribution of mental states to other species. Although willing to accept that mammals feel pain, Key claims that fish lack the mammalian neural mechanisms underlying pain and are unconscious of their experiences. Consequently, we do not need to be overly concerned about fishing practices that would otherwise be viewed as painful. Key uses a flawed anthropomorphic lens. All attributions of mental events to organisms other than oneself involve inferences derived from anthropomorphic processes through which we process physiological and behavioral …

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Population Genetic Structure Of Necturus Maculosus In Central And Eastern Kentucky, Mason Owen Murphy Jan 2016

Population Genetic Structure Of Necturus Maculosus In Central And Eastern Kentucky, Mason Owen Murphy

Theses and Dissertations--Biology

Population structure is influenced by extrinsic factors, such as landscape architecture and dispersal barriers. Lotic network architecture is known to constrain ecological, demographic and evolutionary processes, including population genetic structure. I assessed the population structure of a widespread aquatic salamander, Necturus maculosus, across three river basins in central and eastern Kentucky. I examined the role of network architecture, anthropogenic barriers, and spatial scale on patterns of population structure. I also provided a review of N. maculosus capture methods and offer an improved trap design. I identified significant structuring between the combined Licking/Kinniconick basin and the Kentucky River basin, with …

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New Verified Nonindigenous Amphibians And Reptiles In Florida Through 2015, With A Summary Of More Than 152 Years Of Introductions, Kenneth L. Krysko, Louis A. Somma, Dustin C. Smith, Christopher R. Gillette, Daniel Cueva, Joseph A. Wasilewski, Kevin M. Enge, Steve A. Johnson, Todd S. Campbell, Jake R. Edwards, Michael R. Rochford, Ryan Tompkins, Jeffrey L. Fobb, Scott Mullin, Christopher J. Lechowicz, Dallas Hazelton, Alície Warren Jan 2016

New Verified Nonindigenous Amphibians And Reptiles In Florida Through 2015, With A Summary Of More Than 152 Years Of Introductions, Kenneth L. Krysko, Louis A. Somma, Dustin C. Smith, Christopher R. Gillette, Daniel Cueva, Joseph A. Wasilewski, Kevin M. Enge, Steve A. Johnson, Todd S. Campbell, Jake R. Edwards, Michael R. Rochford, Ryan Tompkins, Jeffrey L. Fobb, Scott Mullin, Christopher J. Lechowicz, Dallas Hazelton, Alície Warren

Papers in Herpetology

More nonindigenous species occur in Florida, USA, than any other region worldwide and may threaten many of Florida’s natural resources. The frequency of new reports mandates the need for regular updates. Herein, we use photographic and specimen vouchers in addition to literature records to provide updated information on verified nonindigenous amphibians and reptiles in Florida. Between our most recent summary in 2012 and the end of 2015, 38 additional species are known to have been intercepted (n = 2) or introduced (n = 36). We also update the invasion stage of seven species previously reported from Florida and …

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Evidence Of Rock Kangaroo Seed Dispersal Via Faecal Seed Storage In A Tropical Monsoon Community, Chris Martine, Ally Boni, Elizabeth Capaldi, Gemma Lionheart, Ingrid E. Jordon-Thaden Jan 2016

Evidence Of Rock Kangaroo Seed Dispersal Via Faecal Seed Storage In A Tropical Monsoon Community, Chris Martine, Ally Boni, Elizabeth Capaldi, Gemma Lionheart, Ingrid E. Jordon-Thaden

Faculty Journal Articles

While some of the plant species of the ‘Sandstone Country’ along the escarpment of western Arnhem Land produce fleshy fruits and appear to rely on biotic methods of seed dispersal, little is known about the methods by which this is achieved – and few potential dispersers co-occur in the sandstone outcrop communities. For the present study, scat collections were made on outcrops in the northeastern area of Kakadu National Park with the hope of uncovering relationships between local frugivores and fruit-producers, and providing evidence for seasonal storage of mammal-dispersed seeds in scat prior to germination. The goals of the present …

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Fish Lack The Brains And The Psychology For Pain, Stuart W.G. Derbyshire Jan 2016

Fish Lack The Brains And The Psychology For Pain, Stuart W.G. Derbyshire

Animal Sentience

Debate about the possibility of fish pain focuses largely on the fish’s lack of the cortex considered necessary for generating pain. That view is appealing because it avoids relatively abstract debate about the nature of pain experience and subjectivity. Unfortunately, however, that debate cannot be entirely avoided. Subcortical circuits in the fish might support an immediate, raw, “pain” experience. The necessity of the cortex only becomes obvious when considering pain as an explicitly felt subjective experience. Attributing pain to fish only seems absurd when pain is considered as a state of explicit knowing.

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Quantifying Bat Detection Survey Methods And Activity Patterns, Tara C. Hohoff Jan 2016

Quantifying Bat Detection Survey Methods And Activity Patterns, Tara C. Hohoff

Masters Theses

Bats have an astonishing diversity and provide vital ecosystem services in an array of different niches. In North America, most species of bats are insectivores and tend to be frequently overlooked for their important ecosystem role providing insect control. As bat populations have declined in recent years, farmers, land managers, conservationists, and bat enthusiasts have wondered what we can do to protect our local bat populations. As a first step, we need to develop methods that more effectively survey for rare species of bats. By performing inefficient surveys, we are doing a disservice to our funding agencies providing misinformation that …

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Fish Pain: A Painful Topic, Carl Safina Jan 2016

Fish Pain: A Painful Topic, Carl Safina

Animal Sentience

If fish cannot feel pain, why do stingrays have purely defensive tail spines that deliver venom? Stingrays’ ancestral predators are fish. And why do many fishes possess defensive fin spines, some also with venom that produces pain in humans? These things did not evolve just in case sentient humans would evolve millions of years later and then invent scuba. If fish react purely unconsciously to “noxious” stimuli, why aren’t sharp jabbing spines enough? Why also stinging venom?

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Why Animal Welfarism Continues To Fail, Lori Marino Jan 2016

Why Animal Welfarism Continues To Fail, Lori Marino

Animal Sentience

Welfarism prioritizes human interests over the needs of nonhuman animals. Despite decades of welfare efforts other animals are mostly worse off than ever before, being subjected to increasingly invasive and harmful treatments, especially in the factory farming and biomedical research areas. A legal rights-based approach is essential in order for other animals to be protected from the varying ethical whims of our species.

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Why Fish Do Not Feel Pain, Brian Key Jan 2016

Why Fish Do Not Feel Pain, Brian Key

Animal Sentience

Only humans can report feeling pain. In contrast, pain in animals is typically inferred on the basis of nonverbal behaviour. Unfortunately, these behavioural data can be problematic when the reliability and validity of the behavioural tests are questionable. The thesis proposed here is based on the bioengineering principle that structure determines function. Basic functional homologies can be mapped to structural homologies across a broad spectrum of vertebrate species. For example, olfaction depends on olfactory glomeruli in the olfactory bulbs of the forebrain, visual orientation responses depend on the laminated optic tectum in the midbrain, and locomotion depends on pattern generators …

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An Invertebrate Perspective On Pain, Jennifer A. Mather Jan 2016

An Invertebrate Perspective On Pain, Jennifer A. Mather

Animal Sentience

Although Key (2016) argues that mammals feel pain and fish do not, from an invertebrate perspective, it is obvious that the pain experience is shared by animals from a number of different animal groups.

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Should Fish Feel Pain? A Plant Perspective, František Baluška Jan 2016

Should Fish Feel Pain? A Plant Perspective, František Baluška

Animal Sentience

Key (2016) claims fish that fish do not feel pain because they lack the necessary neuronal architecture: their responses to noxious stimuli, according to Key, are executed automatically without any feelings. However, as pointed out by many of his commentators, this conclusion is not convincing. Plants might provide some clues. Plants are not usually thought to be very active behaviorally, but the evidence suggests otherwise. Moreover, in stressful situations, plants produce numerous chemicals that have painkilling and anesthetic properties. Finally, plants, when treated with anesthetics, cannot execute active behaviors such as touch-induced leaf movements or rapid trap closures after localizing …

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A Single Strand Of Argument With Unfounded Conclusion, Robert W. Elwood Jan 2016

A Single Strand Of Argument With Unfounded Conclusion, Robert W. Elwood

Animal Sentience

Key (2016) describes the neural system involved in human pain experience in an excellent fashion but then suggests that only that complete system can generate the experience of pain. Thus animals without all components will not feel pain. This argument has been refuted in the past by analogy to vision where it is clear that a broad range of taxa, vertebrate and invertebrate, have good visual abilities albeit with completely different central nervous systems and receptors. This known counterargument to Key’s main idea is not mentioned in the target article. Further criteria that might indicate pain and studies examining these …

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What Would The Babel Fish Say?, Monica Gagliano Jan 2016

What Would The Babel Fish Say?, Monica Gagliano

Animal Sentience

Starting with its title, Key’s (2016) target article advocates the view that fish do not feel pain. The author describes the neuroanatomical, physiological and behavioural conditions involved in the experience of pain in humans and rodents and confidently applies analogical arguments as though they were established facts in support of the negative conclusion about the inability of fish to feel pain. The logical reasoning, unfortunately, becomes somewhat incoherent, with the arbitrary application of the designated human criteria for an analogical argument to one animal species (e.g., rodents) but not another (fish). Research findings are reported selectively, and questionable interpretations are …

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Leaving The Door Open For Fish Pain: Evolutionary Convergence And The Utility Of ‘Just-So Stories’, David B. Edelman Jan 2016

Leaving The Door Open For Fish Pain: Evolutionary Convergence And The Utility Of ‘Just-So Stories’, David B. Edelman

Animal Sentience

Key argues that fish do not experience pain because they lack the necessary (but not necessarily sufficient) brain structures and associated functional circuitry to engender such conscious percepts. I propose that fish pain may be dependent on neuroanatomical regions and pathways that are structurally and/or functionally analogous — but not strictly homologous — to well-characterized mammalian substrates of pain. An example is the convergent appearance of the complex, single-compartment eye across invertebrate and vertebrate phylogeny. Structural-functional convergence is ubiquitous in evolution. Comparative inferences and correlative lines of evidence play an important role in building evolutionary arguments. The dismissal of the …

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Pain-Capable Neural Substrates May Be Widely Available In The Animal Kingdom, Edgar T. Walters Jan 2016

Pain-Capable Neural Substrates May Be Widely Available In The Animal Kingdom, Edgar T. Walters

Animal Sentience

Neural and behavioral evidence from diverse species indicates that some forms of pain may be generated by coordinated activity in networks far smaller than the cortical pain matrix in mammals. Studies on responses to injury in squid suggest that simplification of the circuitry necessary for conscious pain might be achieved by restricting awareness to very limited information about a noxious event, possibly only to the fact that injury has occurred, ignoring information that is much less important for survival, such as the location of the injury. Some of the neural properties proposed to be critical for conscious pain in mammals …

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How Not To Move The Line Drawn On Pain, Bjorn H. Merker Jan 2016

How Not To Move The Line Drawn On Pain, Bjorn H. Merker

Animal Sentience

In this second commentary I outline the inadequacy of Key's responses to the many peer critiques of his thesis that have so far appeared in Animal Sentience. I illustrate with examples drawn from his response to my first commentary.

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Diet And Foraging Behaviors Of Timber Rattlesnakes, Crotalus Horridus, In Eastern Virginia, Scott M. Goetz, Christopher E. Petersen, Robert K. Rose, John D. Kleopfer, Alan H. Savitzky Jan 2016

Diet And Foraging Behaviors Of Timber Rattlesnakes, Crotalus Horridus, In Eastern Virginia, Scott M. Goetz, Christopher E. Petersen, Robert K. Rose, John D. Kleopfer, Alan H. Savitzky

Biological Sciences Faculty Publications

During a 17-yr telemetry study, we examined the diet and ambush behavior of a population of Crotalus horridus in southeastern Virginia. Forty dietary items were identified from 37 fecal samples. We documented 722 instances of snakes in an ambush posture, 61 of which were in a vertical-tree posture, as if hunting arboreal prey at the base of a tree. The most common prey items were Eastern Gray Squirrels (Sciurus carolinensis), which accounted for 45 of all dietary items and represented an estimated 78 of total biomass consumed by C. horridus. Prey was not consumed in proportion to availability, …

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What’S The Common Sense Of Just Some Improvement Of Some Welfare For Some Animals?, Liv Baker Jan 2016

What’S The Common Sense Of Just Some Improvement Of Some Welfare For Some Animals?, Liv Baker

Animal Sentience

The goal of Animal Welfare Science to reduce animal suffering is commendable but too modest: Suffering animals need and deserve far more.

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Animal Sentience: The Other-Minds Problem, Stevan Harnad Jan 2016

Animal Sentience: The Other-Minds Problem, Stevan Harnad

Animal Sentience

The only feelings we can feel are our own. When it comes to the feelings of others, we can only infer them, based on their behavior — unless they tell us. This is the “other-minds problem.” Within our own species, thanks to language, this problem arises only for states in which people cannot speak (infancy, aphasia, sleep, anaesthesia, coma). Our species also has a uniquely powerful empathic or “mind-reading” capacity: We can (sometimes) perceive from the behavior of others when they are in states like our own. Our inferences have also been systematized and operationalized in biobehavioral science …

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Nonhuman Mind-Reading Ability, Marthe Kiley-Worthington Jan 2016

Nonhuman Mind-Reading Ability, Marthe Kiley-Worthington

Animal Sentience

Harnad (2016) is mistaken that humans are better at mind-reading than other species. Humans have context-independent language, but nonhuman species, especially mammals, have context-dependent nonverbal skills – perceptual, communicative and social -- that can be much keener than our own.

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Comparative Evolutionary Approach To Pain Perception In Fishes, Culum Brown Jan 2016

Comparative Evolutionary Approach To Pain Perception In Fishes, Culum Brown

Animal Sentience

Arguments against the fact that fish feel pain repeatedly appear even in the face of growing evidence that they do. The standards used to judge pain perception keep moving as the hurdles are repeatedly cleared by novel research findings. There is undoubtedly a vested commercial interest in proving that fish do not feel pain, so the topic has a half-life well past its due date. Key (2016) reiterates previous perspectives on this topic characterised by a black-or-white view that is based on the proposed role of the human cortex in pain perception. I argue that this is incongruent with our …

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