Zoology Commons^™

If Insects Have Phenomenal Consciousness, Could They Suffer?, Elizabeth S. Paul, Michael T. Mendl

Animal Sentience

Klein & Barron’s (K & B’s) suggestion that insects have the capacity for phenomenal consciousness is a refreshing and challenging departure from the cautious and agnostic stance that is taken by many researchers when considering this possibility. It is impossible to falsify the sceptic’s view that neural and behavioural parallels between humans and insects need not imply either similar conscious experience or even any phenomenal consciousness in insects at all. But if K & B are right, it is important to consider the possible contents of insect consciousness. Here we discuss whether affective consciousness, with its implications for potential suffering, …

Rare, Threatened And Endangered Species Of Oregon (2016), James S. Kagan, Sue Vrilakas, John A. Christy, Eleanor P. Gaines, Lindsey Wise, Cameron Pahl, Kathy Howell

Institute for Natural Resources Publications

Extinction is a natural process. Today, however, plant and animal species are disappearing world-wide at an accelerated pace. Based on current trends, half of the species on earth will be extinct within the next 100 years. The major reasons for this are human caused changes to the environment, which continue to increase - in Oregon and throughout the world.

Once lost, a species can never be recovered, and there is no way of knowing how useful it may have been. We do know that human beings and many of their industries depend on plant and animal products. About 50% of …

A Contribution To The Tardigrade Fauna Of Georgia, Usa, Juliana G. Hinton, Harry A. Meyer, Brad Peet

Georgia Journal of Science

Tardigrada (water bears) is a phylum of microscopic animals commonly found in mosses, lichens, leaf litter, and freshwater. There are no published records of marine tardigrades from Georgia. Twelve species have been reported from four counties in the state of Georgia, USA. Eighteen species of water bear were present in lichen, moss, and leaf litter samples from eight additional counties in northern and central Georgia. Ten species – Pseudechiniscus suillus, Milnesium bohleberi, Hypsibius convergens, Astatumen trinacriae, Macrobiotus anemone, Macrobiotus cf. echinogenitus, Macrobiotus cf. islandicus, Macrobiotus spectabilis, Paramacrobiotus cf. areolatus, and Paramacrobiotus …

Walking Behavior Of Zoo Elephants: Associations Between Gps-Measured Daily Walking Distances And Environmental Factors, Social Factors, And Welfare Indicators, Matthew Robert Holdgate, Cheryl L. Meehan, Jennifer N. Hogan, Lance J. Miller, Josesph Soltis, Jeff Andrews, David J. Shepherdson

Biology Faculty Publications and Presentations

Research with humans and other animals suggests that walking benefits physical health. Perhaps because these links have been demonstrated in other species, it has been suggested that walking is important to elephant welfare, and that zoo elephant exhibits should be designed to allow for more walking. Our study is the first to address this suggestion empirically by measuring the mean daily walking distance of elephants in North American zoos, determining the factors that are associated with variations in walking distance, and testing for associations between walking and welfare indicators. We used anklets equipped with GPS data loggers to measure outdoor …

Recumbence Behavior In Zoo Elephants: Determination Of Patterns And Frequency Of Recumbent Rest And Associated Environmental And Social Factors, Matthew Robert Holdgate, Cheryl L. Meehan, Jennifer N. Hogan, Lance J. Miller, Jeff Rushen, Anne-Marie De Passillé, Josesph Soltis, Jeff Andrews, David J. Shepherdson

Biology Faculty Publications and Presentations

Resting behaviors are an essential component of animal welfare but have received little attention in zoological research. African savanna elephant (Loxodonta africana) and Asian elephant (Elephas maximus) rest includes recumbent postures, but no large-scale investigation of African and Asian zoo elephant recumbence has been previously conducted. We used anklets equipped with accelerometers to measure recumbence in 72 adult female African (n = 44) and Asian (n = 28)elephants housed in 40 North American zoos. We collected 344 days of data and determined associations between recumbence and social, housing, management, and demographic factors. African elephants were recumbent less (2.1 hours/day, S.D. …

Range-Wide Patterns Of Geographic Variation In Songs Of Golden-Crowned Sparrows (Zonotrichia Atricapilla), Daizaburo Shizuka, M Ross Lein, Glen Chilton

School of Biological Sciences: Faculty Publications

Discrete geographic variation, or dialects, in songs of songbirds arise as a consequence of complex interactions between ecology and song learning. Four of the five species of Zonotrichia sparrows, including the model species White-crowned Sparrow (Z. leucophrys), have been studied with respect to the causes and consequences of geographic variation in song. Within White-crowned Sparrows, subspecies that migrate farther have larger range size of dialects. Here, we assessed geographic patterns of song variation in the fifth species of this genus, the Golden-crowned Sparrow (Z. atricapilla). We analyzed field-recorded songs from 2 sampling periods (1996–1998 and 2006–2013) …

Rescuing Perishable Neuroanatomical Information From A Threatened Biodiversity Hotspot: Remote Field Methods For Brain Tissue Preservation Validated By Cytoarchitectonic Analysis, Immunohistochemistry, And X-Ray Microcomputed Tomography, Daniel Hughes, Ellen Walker, Paul Gignac, Anais Martinez, Kenichiro Negishi, Carl Lieb, Eli Greenbaum, Arshad Khan

Selected Works Temporary Series

Biodiversity hotspots, which harbor more endemic species than elsewhere on Earth, areincreasingly threatened. There is a need to accelerate collection efforts in these regionsbefore threatened or endangered species become extinct. The diverse geographical, ecological,genetic, morphological, and behavioral data generated from the on-site collection ofan individual specimen are useful for many scientific purposes. However, traditional methodsfor specimen preparation in the field do not permit researchers to retrieve neuroanatomicaldata, disregarding potentially useful data for increasing our understanding of braindiversity. These data have helped clarify brain evolution, deciphered relationships betweenstructure and function, and revealed constraints and selective pressures that provide contextabout the evolution …

Rescuing Perishable Neuroanatomical Information From A Threatened Biodiversity Hotspot: Remote Field Methods For Brain Tissue Preservation Validated By Cytoarchitectonic Analysis, Immunohistochemistry, And X-Ray Microcomputed Tomography, Hughes, Ellen Walker, Paul Gignac, Anais Martinez, Kenichiro Negishi, Carl Lieb, Eli Greenbaum, Arshad Khan

Departmental Papers (Biology)

Biodiversity hotspots, which harbor more endemic species than elsewhere on Earth, areincreasingly threatened. There is a need to accelerate collection efforts in these regionsbefore threatened or endangered species become extinct. The diverse geographical, ecological,genetic, morphological, and behavioral data generated from the on-site collection ofan individual specimen are useful for many scientific purposes. However, traditional methodsfor specimen preparation in the field do not permit researchers to retrieve neuroanatomicaldata, disregarding potentially useful data for increasing our understanding of braindiversity. These data have helped clarify brain evolution, deciphered relationships betweenstructure and function, and revealed constraints and selective pressures that provide contextabout the evolution …

Assessment Of Behavior And Social Dynamics In A Newly-Forming Group Of Captive Western Lowland Gorillas, Sarah Murphey Huskisson

Graduate Theses

This study presents behavioral data of a recently-formed western lowland gorilla (Gorilla gorilla gorilla) group at Riverbanks Zoo and Garden in Columbia, South Carolina, from the initial stages of group formation through the first several months after introduction. The group consists of a male (19 years), two half-sisters (both 10 years), and an unrelated female (20 years). I collected 15-minute focal animal samples for three hours twice a week in two observation blocks, the first lasting from 7/17/15 to 9/11/15, and the second lasting from 10/30/15 to 1/3/16. A total of 99.25 observation hours were collected. It was predicted that …

The Mayfly Newsletter, Peter M. Grant

The Mayfly Newsletter

The Mayfly Newsletter is the official newsletter of the Permanent Committee of the International Conferences on Ephemeroptera.

Elevational Variation In Body-Temperature Response To Immune Challenge In A Lizard, Francisco Javier Zamora-Camacho, Senda Reguera, Gregorio Moreno-Rueda

Dartmouth Scholarship

Immunocompetence benefits animal fitness by combating pathogens, but also entails some costs. One of its main components is fever, which in ectotherms involves two main types of costs: energy expenditure and predation risk. Whenever those costs of fever outweigh its benefits, ectotherms are expected not to develop fever, or even to show hypothermia, reducing costs of thermoregulation and diverting the energy saved to other components of the immune system. Environmental thermal quality, and therefore the thermoregulation cost/benefit balance, varies geographically. Hence, we hypothesize that, in alpine habitats, immune-challenged ectotherms should show no thermal response, given that (1) hypothermia would be …

Global Phylogeny Of The Water Penny Beetles Using Both Molecular And Morphological Evidence (Co, Mathew Vincent Wood

Masters Theses & Specialist Projects

The Psephenidae is a family of freshwater beetles usually found in swift streams worldwide. Their unique disc shaped and flattened larvae have made this a group of interest for scientists for centuries. Morphologically, this family has been relatively well researched, and systematically the family is fairly well known and supported as monophyletic. One issue with Psephenidae, and with many other insect groups, is the lack of the molecular phylogenetic analyses to test morphology hypothesizes.

After successfully sequencing these two genes from species representing nearly all of the known genera, the data were analyzed using both Bayesian and parsimony methods. Analyses …

Molecular Analysis Confirming The Introduction Of Nile Crocodiles, Crocodylus Niloticus Laurenti 1768 (Crocodylidae), In Southern Florida, With An Assessment Of Potential For Establishment, Spread, And Impacts., Michael R. Rochford, Kenneth L. Krysko, Frank J. Mazzotti, Matthew W. Shirley, Mark W. Parry, Joseph A. Wasilewski, Jeffrey S. Beauchamp, Christpher R. Gillette, Edward F. Metzger Iii, Michiko A. Squires, Louis A. Somma

Papers in Herpetology

The state of Florida, USA, has more introduced herpetofauna than any other governmental region on Earth. Four species of nonnative crocodilians have been introduced to Florida (all since 1960), one of which is established. Between 2000–2014 we field-collected three nonnative crocodilians in Miami-Dade County, Florida, and one in Hendry County, Florida. We used DNA barcoding and molecular phylogenetics to determine species identification and native range origin. Also, we described diet, movement, and growth for one crocodile. Our molecular analyses illustrated that two of the crocodiles we collected are most closely related to Nile Crocodiles (Crocodylus niloticus) from South Africa, suggesting …

Interactions Of A Captive Maturing Female Hamadryas Baboon, Jordyn Kessler, Janice L. Chism Ph.D.

The Winthrop McNair Research Bulletin

In the wild, hamadryas baboons (Papio hamadryas hamadryas) typically practice male philopatry, where females transfer out of natal units to avoid inbreeding (Swedell et al. 2011). However, little is known about hamadryas female transfer in captivity. In this study, we used focal animal sampling (Altmann 1974) to observe female transfer in a captive group comprised of two one-male units. The group includes a subadult female, whom we expected to transfer to the non-natal unit soon after reaching sexual maturity. We recorded the proximity between the subadult female and all other individuals, as well as affiliative and agonistic behavior …

Life Line March 2016, Otterbein Biology And Earth Science Department

Life Line - The Biology Department Newsletter

Department welcomes Dr. Elizabeth Berkeley - Ben Titus '08 - Panama Research - Fracing in Toga County, PA. - Students Intern in China - Faculty Partnerships in Africa

Skeletal Muscle Mass And Composition During Mammalian Hibernation, Clark J. Cotton

Biology Faculty Publications

Hibernation is characterized by prolonged periods of inactivity with concomitantly low nutrient intake, conditions that would typically result in muscle atrophy combined with a loss of oxidative fibers. Yet, hibernators consistently emerge from winter with very little atrophy, frequently accompanied by a slight shift in fiber ratios to more oxidative fiber types. Preservation of muscle morphology is combined with down-regulation of glycolytic pathways and increased reliance on lipid metabolism instead. Furthermore, while rates of protein synthesis are reduced during hibernation, balance is maintained by correspondingly low rates of protein degradation. Proposed mechanisms include a number of signaling pathways and transcription …

The Small Mammals Of Southeastern Virginia As Revealed By Pitfall Trapping, Robert K. Rose

Biological Sciences Faculty Publications

Pitfall trapping is a poor method to catch small mammals but the only way to catch and study the Southeastern Shrew (Sorex longirostris), the primary mammal of interest in the field studies reported here. While learning much about its distribution and abundance, still more was learned about the other small mammals present in forests and fields of eastern Virginia. A total of 15 species was captured at 19 locations during the 1990-2013 period, including five shrews, two moles, and eight rodents, representing all but one of the common small mammals in eastern Virginia.

New Verified Nonindigenous Amphibians And Reptiles In Florida Through 2015, With A Summary Of More Than 152 Years Of Introductions, Kenneth L. Krysko, Louis A. Somma, Dustin C. Smith, Christopher R. Gillette, Daniel Cueva, Joseph A. Wasilewski, Kevin M. Enge, Steve A. Johnson, Todd S. Campbell, Jake R. Edwards, Michael R. Rochford, Ryan Tompkins, Jeffrey L. Fobb, Scott Mullin, Christopher J. Lechowicz, Dallas Hazelton, Alície Warren

Papers in Herpetology

More nonindigenous species occur in Florida, USA, than any other region worldwide and may threaten many of Florida’s natural resources. The frequency of new reports mandates the need for regular updates. Herein, we use photographic and specimen vouchers in addition to literature records to provide updated information on verified nonindigenous amphibians and reptiles in Florida. Between our most recent summary in 2012 and the end of 2015, 38 additional species are known to have been intercepted (n = 2) or introduced (n = 36). We also update the invasion stage of seven species previously reported from Florida and …

Diet And Foraging Behaviors Of Timber Rattlesnakes, Crotalus Horridus, In Eastern Virginia, Scott M. Goetz, Christopher E. Petersen, Robert K. Rose, John D. Kleopfer, Alan H. Savitzky

Biological Sciences Faculty Publications

During a 17-yr telemetry study, we examined the diet and ambush behavior of a population of Crotalus horridus in southeastern Virginia. Forty dietary items were identified from 37 fecal samples. We documented 722 instances of snakes in an ambush posture, 61 of which were in a vertical-tree posture, as if hunting arboreal prey at the base of a tree. The most common prey items were Eastern Gray Squirrels (Sciurus carolinensis), which accounted for 45 of all dietary items and represented an estimated 78 of total biomass consumed by C. horridus. Prey was not consumed in proportion to availability, …

A Missing Link In The Ionoregulatory Strategy Of Larval Sea Lamprey (Petromyzon Marinus) And African Lungfish (Protopterus Annectens): A Closer Look Into The Role Of The Non-Gastric H+/K+-Atpase, Justine E. Doherty

Theses and Dissertations (Comprehensive)

Fishes living in freshwater need to actively compensate for the diffusive loss of ions and osmotic gain of water. The gill is the primary organ of ion regulation and contains an array of ion transport proteins to help maintain homeostasis. Two of the more well studied ion pumps are the Na⁺/K⁺-ATPase (NKA) and vacuolar type proton ATPase (V-ATPase). This thesis focuses on another ion pump known as the non-gastric H⁺/K⁺-ATPase (ngHKA). The ngHKA (gene: atp12a) has not been found in any of the teleost fishes, indicating loss from that lineage. In …

Exploration Of The Range Overlap Between Cynomys Leucurus And Cynomys Ludovicianus, Kenneth D. Choi

Honors Theses

The ranges of two species of prairie dogs, Cynomys leucurus and Cynomys ludovicianus, overlap in a narrow area in the western Great Plains in Wyoming. We used GIS software to map their distributions and infer land cover preferences within and on either side of the zone of overlap. In general, both species used habitats in proportion to their availability and did not display strong selection of their expected vegetation types (based on the literature). However, both species of prairie dogs were overrepresented in areas of human settlements and crops, which may indicate that these species prefer human-modified habitats, or perhaps …

Predicting Toucan Locations In Panama Using Arcgis, Daniel J. Herrera

Geography: Student Scholarship & Creative Works

Toucans are omnivorous birds native to southern Latin America and South America. They are non-migratory, and their range is disputed among experts. In an attempt to develop a better understanding of the range and behavior of toucans, correlations between toucan presence and geographic features of the area were analyzed to create a location probability map.

The Examination Of Enrichment Using Space And Food For African Elephants (Loxodonta Africana) At The San Diego Zoo Safari Park, Charlotte Hacker

Masters Theses & Specialist Projects

Concern for elephant welfare in zoological facilities has prompted a number of exhibit and management modifications, including those involving enrichment. Knowledge of how these changes impact measures of health and wellbeing, such as elephant movement and behavior, is crucial as the effects of multiple enrichment types and their interactions are largely understudied. The present study used observations and GPS unit collected data to determine the effects of space and food on the walking distance and behavior of thirteen African elephants, whose dominance structure was ascertained by the handlers at the San Diego Zoo Safari Park (SDZSP). This facility has two …

Taxonomy Of The Bitentaculate Cirratulidae (Polychaeta), Stacy A. Tewari

Graduate Masters Theses

The bitentaculate cirratulid polychaetes are an important faunal element of both near shore and deep-sea benthic faunal communities. The true diversity of the family is currently unknown due to a large number of undescribed species and erroneously applied “cospmopolitan” names being applied to local species. Cirratulids have been misidentified even in the local waters near the University of Massachusetts Boston. The current study presents six new species from North America. Caulleriella venefica, Chaetozone anasimus, Chaetozone diodonta, and Chaetozone hystricosus are described from Boston Harbor and Massachusetts Bay where only two species had previously been reported. Aphelochaeta bullata …

Seasonal Dynamics And Micro-Climatic Preference Of Two Alpine Endemic Hypogean Beetles, Stefano Mammola, Elena Piano, Pier Mauro Giachino, Marco Isaia

International Journal of Speleology

Hypogean beetles generally live in stable environments, characterized by constant temperature and high relative humidity. Changes in the underground microclimatic conditions generally induce local migrations of the beetles through the hypogean environment in search of suitable microhabitats. We studied the seasonal dynamics and the micro-climatic preference of two Alpine endemic hypogean beetles - Sphodropsis ghilianii (Coleoptera, Carabidae) and Dellabeffaella roccae (Coleoptera, Cholevidae) - in the hypogean complex of Pugnetto (Graian Alps, Italy). We surveyed the two species for one year, using baited pitfall traps and measuring temperature and humidity along the two main caves. We used logistic regression mixed models …

Phylogeography Of Southeast Asian Flying Foxes (Chiroptera: Pteropodidae: Pteropus), Susan Man Shu Tsang

Dissertations, Theses, and Capstone Projects

Flying foxes (Pteropus) are a genus of Old World fruit bats that are important seed dispersers and pollinators for plants native to the 200,000+ islands in Southeast Asia, yet they are some of the most poorly known bats in the world. They comprise some of the largest known bat species, and are morphologically relatively conserved on the genus level. Pteropus is the most species-rich genus within Pteropodidae, though the origin for this diversity remains incompletely understood. In Chapter 1, I discuss the importance of Pteropus to the ecosystem and as reservoir hosts. In Chapter 2, a molecular phylogeny is presented …

Habituation To Auditory Stimuli By Captive African Elephants (Loxodonta Africana), Sarah Elizabeth Goodyear

Masters Theses & Specialist Projects

Elephants are cognitive species that exhibit many types of learning. Associative, social, and insight learning have been investigated with elephants, but one of the simplest forms, habituation, has not. As an individual learns that a stimulus is neither harmful nor beneficial, it will decrease its response to the stimulus through the process of habituation. Elephants possess a well-developed sensory system and may habituate to stimuli that could be used for enrichment and/or management. The aim of this study was to examine the habituation process of elephants in response to repeated presentations of two auditory stimuli –buzzing by a disturbed beehive …

Comparison Of Microwear On Rodent Molars From Differing Species And A Wide Range Of Environments, Mikko Joiner

Anthropology Undergraduate Honors Theses

Dental microwear analysis is a very useful tool when trying to infer the diet of a particular organism. By studying the use-wear scars left on the enamel of the tooth due to eaten objects, one can infer the diet of the organism because certain types of food leave certain types of scars. For example, the consumption of tree parts produces pits, while the consumption of grasses produces striated scratches (Ungar et al., 2007). Thus, based on the type of microwear, the diet of the organism in question can be deduced, which indicates the type of environment that it lives in. …

Isotopic Incorporation Rates And Discrimination Factors In Mantis Shrimp Crustaceans., Maya Devries, Carlos Del Rio, Tate Tunstall, Todd Dawson

Faculty Publications, Biological Sciences

Stable isotope analysis has provided insights into the trophic ecology of a wide diversity of animals. Knowledge about isotopic incorporation rates and isotopic discrimination between the consumer and its diet for different tissue types is essential for interpreting stable isotope data, but these parameters remain understudied in many animal taxa and particularly in aquatic invertebrates. We performed a 292-day diet shift experiment on 92 individuals of the predatory mantis shrimp, Neogonodactylus bredini, to quantify carbon and nitrogen incorporation rates and isotope discrimination factors in muscle and hemolymph tissues. Average isotopic discrimination factors between mantis shrimp muscle and the new diet …

The Mayfly Newsletter, Peter M. Grant

The Mayfly Newsletter

The Mayfly Newsletter is the official newsletter of the Permanent Committee of the International Conferences on Ephemeroptera.