Aquaculture and Fisheries Commons^™

Evaluating The Effectiveness Of Grassbed Treatments As Habitat For Juvenile Black Bass In A Drawdown Reservoir, D. R. Ratcliff, Wayne A. Wurtsbaugh, J. Zustak

Watershed Sciences Faculty Publications

Many reservoirs in arid regions experience highly variable water levels caused by seasonal inflow fluctuations and designated outflow requirements. At Shasta Lake, California, managers plant cereal-grain grassbeds on exposed drawdown shorelines to increase juvenile fish habitat, localize productivity, and increase invertebrate fish prey. To determine the efficacy of these plantings, the abundance of juvenile black basses Micropterus spp. (20–55 mm standard length) and the amount of periphyton and macroinvertebrate prey were compared among three treatment types: (1) planted grassbeds of cereal barley Hordeum vulgare; (2) artificial rope grassbeds, which eliminated physical deterioration and nutrient release; and (3) nonplanted control sites …

Rethinking Western Water Law: Instream Flows, Reed D. Benson

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Reed D. Benson, University of New Mexico School of Law

1 page.

Sustainable Water Policies In The Rocky Mountain West: An Action Agenda, Sarah Bates

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Sarah Bates, Western Progress

10 pages.

Includes bibliographical references

"Review Draft, May 15, 2008"

Community Response To Habitat Restoration In Sickle And Bear Creeks, With Emphasis On Mottled Sculpin In Sickle Creek, Jason Andrew Deboer

Masters Theses

Habitat restoration is employed by biologists and managers to improve the natural functionality and value of aquatic resources. Systems suffer impairment from many sources, including excessive fine sediment, which negatively affects substrate composition, channel morphology, aquatic invertebrate habitat, and fish reproduction and recruitment. Primary objectives included monitoring the biophysical response to sediment abatement in the Big Manistee River watershed. Secondary objectives included (1) placing the biophysical response to the restoration in the context of a much larger watershed plan, (2) quantifying seasonal mottled sculpin movement and habitat use in Sickle Creek for 1-year, and (3) determining habitat variables which may …

Optimal Data Partitioning And A Test Case For Ray-Finned Fishes (Actinopterygii) Based On Ten Nuclear Loci, Chenhong Li, Guoqing Lu, Guillermo Orti

Biology Faculty Publications

Data partitioning, the combined phylogenetic analysis of homogeneous blocks of data, is a common strategy used to accommodate heterogeneities in complex multilocus data sets. Variation in evolutionary rates and substitution patterns among sites are typically addressed by partitioning data by gene, codon position, or both. Excessive partitioning of the data, however, could lead to overparameterization; therefore, it seems critical to define the minimum numbers of partitions necessary to improve the overall fit of the model. We propose a new method, based on cluster analysis, to find an optimal partitioning strategy for multilocus protein-coding data sets. A heuristic exploration of alternative …

A Practical Approach To Phylogenomics: The Phylogeny Of Ray-Finned Fish (Actinopterygii) As A Case Study, Chenhong Li, Guillermo Orti, Gong Zhang, Guoqing Lu

Biology Faculty Publications

Background: Molecular systematics occupies one of the central stages in biology in the genomic era, ushered in by unprecedented progress in DNA technology. The inference of organismal phylogeny is now based on many independent genetic loci, a widely accepted approach to assemble the tree of life. Surprisingly, this approach is hindered by lack of appropriate nuclear gene markers for many taxonomic groups especially at high taxonomic level, partially due to the lack of tools for efficiently developing new phylogenetic makers. We report here a genome-comparison strategy to identifying nuclear gene markers for phylogenetic inference and apply it to the …

Anadromous Rainbow Smelt And Tomcod In Connecticut: Assessment Of Populations, Conservation Status, And Need For Restoration Plan, Heather A. Fried, Eric T. Schultz

EEB Articles

(beginning of rainbow smelt executive summary)

Evidence indicates that anadromous rainbow smelt (Osmerus mordax) populations in Connecticut and elsewhere in the northeast United States have severely declined. Several sampling programs have documented declines in Connecticut’s smelt populations over the last three decades (Marcy 1976a, Marcy 1976b, Millstone Environmental Laboratory 2005). Similar declines have also been documented in the Hudson River (ASA Analysis & Communication 2005) and in Massachusetts (personal communication, Brad Chase, MA Division of Marine Fisheries 2004). Recreational and commercial fisheries in the region for this species have virtually ceased (Blake and Smith 1984). The Connecticut Fish Advisory Committee …

Assessment Of Anadromous Alewife And Blueback Herring Populations In Connecticut Coastal Streams And Connecticut River Tributaries, Justin P. Davis, Eric T. Schultz

EEB Articles

Alewife (Alosa pseudoharengus) and blueback herring (A. aestivalis) occur in anadromous populations that have a largely overlapping distribution from Florida to Newfoundland (Loesch 1987). Anadromous populations of these species are commonly collectively referred to as “river herring”. Adults inhabit coastal shelf waters until sexual maturity is reached at age 3-5 (Neves 1981). Sexually mature individuals make spawning migrations, commonly referred to as “runs”, into freshwater systems during spring months (Loesch 1987). Spawners can survive and return to spawn in subsequent years (Mullen et al. 1986). Juveniles reside in freshwater for 3-7 months, at which time they undertake a gradual migration …

Ecology Of The Missouri River. Progress Report, Dingell-Johnson Project F-75-R-24, Supplement I - Missouri River Creel Survey, Camp Creek To Kansas State Line, 1 April Through 13 October 2006., Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 29 March through 10 October 2003. This is the fourth of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 30,000 hours fishing the Missouri River from Camp Creek (rk 883.5) to the Kansas state line (rk 790.2) during the survey period. Effort peaked during the …

Ecology Of The Missouri River: Missouri River Creel Survey, Bellevue Bridge To Camp Creek, 3 April Through 29 May 2004, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

The Nebraska Game and Parks Commission's strategic plan has stated the following management goal for the Missouri River: Restore, protect, and maintain the diversity of historic Missouri River habitats, resources, and ecosystem functions in order that present and future generations may enjoy consumptive and non-consumptive outdoor recreational opportunities (NGPC 1996). To accomplish this goal the Nebraska Game and Parks Commission identified the following five objectives: • To restore terrestrial and aquatic floodplain habitat types by 2008. This would include old oxbows, chutes, side channels, sand bars, backwaters, wetlands, and other shallow water habitats. To restore ftows that reflect the natural …

The Effect Of Changing Environmental Stimuli On Betta Splendens Behavior, Jessica Kingsley

Honors Capstones

Capstone submitted as a graduation requirement for the BSU Honors program.

Ecology Of The Missouri River. Progress Report, Dingell-Johnson Project F-75-R-23, Supplement I - Missouri River Creel Survey, Bellevue To Camp Creek, 2 April Through 14 October 2005, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 2 April through 14 October 2005. This is the sixth of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. We returned to the Bellevue to Camp Creek reach in 2005 because we had to cancel the creel on this reach in 2004 after the second creel period due to lack of personnel. Future reports will contain additional …

Ecology Of The Missouri River: Missouri River Creel Survey, Bellevue Bridge To Camp Creek, 30 March Through 11 October 2002. Supplement I, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 30 March through 11 October 2002. This is the third of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 42,000 hours fishing the Missouri River from Bellevue (rkm 967.7) to Camp Creek (rkm 883.5) during the survey period. Effort was steady from late spring (4/27 …

The Diversity And Abundance Of Parasites In Age Groups Of Yellow Perch In Lake Bemidji, Mn Applied To A Whittaker Curve, Kelly J. Main

Honors Capstones

Capstone submitted as a graduation requirement for the BSU Honors Program.

Ecology Of The Missouri River. Progress Report, Dingell-Johnson Project F-75-R-19, Supplement 1- Missouri River Creel Survey, Camp Creek To Kansas State Line, 31 March Through 12 October 2001, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 31 March through 12 October 2001. This is the second of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 22,000 hours fishing the Missouri River from Camp Creek (rkm 883.5) to the Kansas state line (rkm 790.2) during the survey period. Effort peaked during the …

Reproduction Of Black Drum, Pogonias Cromis, From The Chesapeake Bay Region, Brian K. Wells, Cynthia M. Jones

Virginia Journal of Science

Ovaries of black drum, Pogonias cromis, collected from the Chesapeake Bay region in 1992, were used to describe reproductive strategy and fecundity. Histological examination showed that black drum spawn in the Chesapeake Bay region from April through early June. Distributions of oocyte diameter showed distinct oocyte-developmental groups indicating that Chesapeake Bay black drum are group-synchronous batch spawners. Female black drum are extremely fecund ranging from 414,000 to 3,736,000 hydrated oocytes (mean = 1,389,000) per batch with a spawning periodicity of 3.8 days. Estimates of spawning strategy, spawning periodicity, and batch fecundity for black drum from the Chesapeake Bay region …

Fisheries Occasional Publication No. 31 - Feeding Lupins To Fish: A Review Of The Nutritional And Biological Value Of Lupins In Aquaculture Feeds, Brett Glencross

Fisheries Occasional Publications

Lupins are the harvested seed of species from the Lupinus genus, a group within the leguminous bean and pea family Fabaceae. Legumes are particularly valuable agricultural crops because of their capacity to provide a grain crop and also fix and return nitrogen to soils and improve the soil value for further cropping. The oilseeds, soybeans and peanuts are also leguminous plants, though traditionally they have been cropped for their oil value, whereas lupins, are cropped for both their protein and nitrogen fixing value (Gladstones, 1998; Perry et al., 1998).

The three key commercial species of lupins are L. angustifolius (Narrow-leafed …

Comparison Of Larval Myomere Counts Among Species Of Nocomis In Virginia (Actinopterygii: Cyprinidae), Terre D. Green, Eugene G. Maurakis

Virginia Journal of Science

Larval myomere counts of Nocomis platyrhynchus were made using a dissecting light microscope equipped with polarizing filters, and then compared to those of the three other species of Nocomis (Nocomis leptocephalus, Nocomis micropogon, and Nocomis raneyi) found in Virginia. Average preanal myomere counts for N. platyrhynchus (26.9) were significantly different from those of the other three species (N. raneyi =28.7; N. micropogon =26.0; and N. leptocephalus =25.9). This is especially important as larvae of N. leptocephalus, the only other species of Nocomis syntopic with N. platyrhynchus in the upper New River drainage, can now …

Feeding Habits Of Young-Of-Year Striped Bass, Morone Saxatilis, And White Perch, Morone Americana, In Lower James River, Va, Paul J. Rudershausen, Joseph G. Loesch

Virginia Journal of Science

A total of 188 young-of-year (YOY) striped bass, Morone saxatilis, and 199 YOY white perch, Morone americana, were collected by pushnet, seine and trawl during 24-hour periods from June through August, 1992 in lower James River, Virginia. The purpose was to identify prey and temporal and spatial feeding habits. Copepods were the most numerous prey of both species. Fishes and mysids comprised the largest volumetric percentage of diets of striped bass and white perch, respectively. Using an index of relative importance, leptodorids and copepods were the most important prey of striped bass and white perch, respectively. Both species …

Fish Health For Fish Farmers - 2nd Edition, Tina Thorne

Fisheries Published Reports

2nd edition.

Disease is a departure from the normal state of health of a fish or any other animal. Diseases have no doubt occurred among fishes since these animals have occupied a place on the earth. Scientific efforts to understand the causes of disease in fishes, and to attempt to control them however, have only been made during the last sixty years.

Fishes, crustaceans and molluscs, as with other animals are subject to a wide spectrum of diseases, that can be classified as infectious or non-infectious. The vast majority of disease problems in the intensive farming of aquatic animals can …

A Spatial And Temporal Analysis Of Riparian Vegetation Along Satus Creek On The Yakama Indian Reservation, Kathryn Gellenbeck

All Master's Theses

Satus Creek provides critical habitat for the Yakima River Basin steelhead. A diverse community of riparian vegetation is important for healthy fish habitat; vegetation changes can affect shade, cover, channel structure, water quality, and food availability. The purpose of this thesis is to analyze and illustrate riparian vegetation change, both temporally and spatially, along three separate reaches of Satus Creek. A Geographic Information Systems approach was applied to assess the vegetation change by comparing plant species composition and density on 1949 and 1995 aerial photographs. The GIS approach allowed patterns and trends in the vegetation to be identified. In less …

Reproductive Biology Of Chesapeake Bay Black Drum, Pogonias Cromis, With An Assessment Of Fixatives And Stains For Histological Examination Of Teleost Ovaries, Brian K. Wells

Biological Sciences Theses & Dissertations

Based on three years of data collection on the periodicity of the spawning run, the gonadosomatic index (GSI), and gonad histology, the spawning season for Chesapeake Bay black drum was found to be significantly shorter and later compared to populations from Florida and the Gulf of Mexico. The GSI is maximal in early April when black drum first enter the Chesapeake Bay region in contrast to data from Florida where GSI peaks during February and March. I confirm that black drum from the Chesapeake Bay are batch spawners. These results match those found for populations of black drum in the …

Age, Growth, And Mortality Of Atlantic Croaker, Micropogonias Undulatus, In The Chesapeake Bay Region, With A Discussion Of Apparent Geographic Changes In Population Dynamics, Luiz R. Barbieri, Mark E. Chittenden Jr., Cynthia M. Jones

OES Faculty Publications

Atlantic croaker, Micropogonias undulatus, collected from commercial catches in Chesapeake Bay and in Virginia and North Carolina coastal waters during 1988-1991 (n=1,967) were aged from transverse otolith sections. Ages 1-8 were recorded, but eight-year-old fish were rare. Marginal increment analysis showed that for ages 1-7, annuli are formed once a year during the period April-May. Otolith age readings were precise: >99% agreement within and between readers. Observed lengths-at-age were highly variable and growth rate decreased after the first year. Despite the high variability in sizes-at-age, observed lengths for ages 1-7 fit the von Bertalanffy growth model (r2=0.99; n=753) well. …

Comparison Of Predicted And Observed Dioxin Levels In Fish: Implications For Risk Assessment, Judy S. Lakind, Daniel Q. Naiman

RISK: Health, Safety & Environment (1990-2002)

After comparing sampled and modelled dioxin levels in the tissue of fish near pulp and paper mill discharges, the authors argue that, until an improved bioaccumulation model is incorporated into EPA's Risk assessment process, determination of human health Risks associated with consuming dioxin-contaminated fish should be based on sampling.

An Empirical Model Of Gastric Evacuation Rates For Fish And An Analysis Of Digestion In Piscivorous Brown Trout, E. He, Wayne A. Wurtsbaugh

Watershed Sciences Faculty Publications

The gastric evacuation rates of brown trout Salmo trutta (0.9–1.6 kg) feeding on fingerling rainbow trout Oncorhynchus mykiss (3.5–7.6 g) were measured in the laboratory at five temperatures (4.5, 9.0, 14.0, 19.0, and 22.5°C). Instantaneous gut evacuation rates (Re) increased exponentially with temperature (T): Re = 0.053se^0.073T, r^2 = 0.98; they varyied from 7%sh^–1 at 4.5°C to 29%sh^–1 at 22.5°C. Linear regressions described the relationship between time and qualitative measures of fish digestion, thus allowing investigators to determine how long an ingested fish would be identifiable at different temperatures. An analysis of published evacuation rates (N = 121) of 22 …

A Study Of The Summer Steelhead, Oncorhynchus Mykiss In Several Intermittent Tributaries Of The Satus Creek Basin, Washington, Joel Denney Hubble

All Master's Theses

The summer steelhead, Oncorhynchus mykiss population was studied in three intermittent tributaries in the Satus Creek Basin. There was a strong tendency for post emergent fry, resulting from redds located in intermittent reaches to move downstream. However, survival to perennial flow conditions was very low. Steelhead production in Dry Creek appears to be lower than in Logy Creek, because of elevated water temperatures and minimal spring and summer stream flow.

Investigations Of Forage Fish And Lake Trout Salvelinus Namaycush Interactions In Flaming Gorge Reservoir, Wyoming-Utah, Daniel L. Yule

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

I investigated the interaction of lake trout (Salvelinus namaycush) and their dominant forage fish populations, Utah chub (Gila atraria) and kokanee salmon (Oncorhynchus nerka), in Flaming Gorge Reservoir, Wyoming-Utah. Through bioenergetics modeling, I quantified the consumption dynamics of the lake trout population. From hydroacoustics analyses, I quantified the density and biomass of the two dominant forage fish populations.

In Chapter II, I report the results of the energetics analysis. The objective of this chapter was to understand the role of lake trout predation in recent changes in fish assemblage structure of the reservoir. Through …

Studies Of The Ichthyofauna Of Connecticut, Paul M. Jacobson

Storrs Agricultural Experiment Station

No abstract provided.

Mass Marking Of Mosquitofish: Preliminary Results, Bruce Vondracek, Wayne A. Wurtsbaugh, Joseph J. Cech Jr.

Watershed Sciences Faculty Publications

Three marking techniques were tested to determine their applicability for mosquitofish. Tetracycline drugs and DC Ar administered in the diet successfully marked laboratory-cultured mosquitofish, but exposure to direct sunlight in outdoor tanks resulted in the rapid disappearance of the marks. Preliminary data on fluorescent marks from a polystyrene pigment in a melamine-sulfonamide-formaldehyde resin forced into the dermal ,tissue with compressed air are more promising.

A t an optimal deliver pressure of 7.3 m Hg (140 p.s.i.) and spraying time of 15 sec., marking percentage is maximized and fish mortality is minimized. Mark retention time was up to 80 days in …

Morphological Variation Among 14 Species Of Callogobius Bleeker (Pisces: Gobiidae), James Francis Mckinney

Biological Sciences Theses & Dissertations

A survey of the variation among the species of the Callogobius complex has been accomplished in order to determine if recognition of more than one genus is warranted for this assemblage of species. Emphasis has been placed on the osteological variation. Relationships among certain species within the Callogobius complex have been exposed. Although there are two well defined species groups within the complex, it is felt that inclusion of all of the examined species within the single genus Callogobius is the most parsimonious course of action.