Animal Sciences Commons^™

An Assessment Of Night Time And Seasonal Electrofishing In The Lower Wabash River, Eric Christopher Hine

Masters Theses

Large rivers are highly important systems; being exploited both commercially and recreationally. Because of this usage by humans, close monitoring of the ecology of theses rivers is of the utmost importance. The Long-Term Electrofishing project (LTEF) monitors the fish communities of the Illinois, Mississippi, Wabash, and Ohio rivers using day time, pulsed-DC electrofishing during the late Spring through the early Fall each year. Given that previous studies have noted diel and seasonal changes in catch and composition of fish communities, the addition of night time electrofishing may be beneficial to the overarching goals of the LTEF. This study sought to …

Tiger Sharks Eat Songbirds: Scavenging A Windfall Of Nutrients From The Sky, J. Marcus Drymon, K. Feldheim, A. M.V. Fournier, E. A. Seubert, A. E. Jefferson, A. M. Kroetz, Sean P. Powers

University Faculty and Staff Publications

No abstract provided.

Growing South Dakota (Winter 2019), College Of Agriculture, Food And Environmental Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

This is issue contains the South Dakota Agricultural Experiment Station 2018 Annual Report, and the SDSU Extension 2018 Annual Report.

[Page] 2 Setting Into role as Dean
[Page] 4 Raven Precision Ag Center Groundbreaking Ceremony
[Page] 10 Collaborating for Research-Based Solutions
[Page] 12 From the SDSU Extension Director
[Page] 14 Empowering South Dakotans Through Training and Certifications
[Page] 18 Mental Health and Opioid Education
[Page] 21 Science of Agriculture
[Page] 23 Community Gardens Bring Hope to Pine Ridge Indian Reservation
[Page] 26 Energize! Conference
[Page} 28 Disaster Preparedness Training
[Page] 30 Bush Foundation Change Network
[Page] 32 SDSU to Participate …

A Multi-Scale Analysis Of Jaguar (Panthera Onca) And Puma (Puma Concolor) Habitat Selection And Conservation In The Narrowest Section Of Panama., Kimberly A. Craighead

Antioch University Dissertations & Theses

Over the past two centuries, large terrestrial carnivores have suffered extreme population declines and range contractions resulting from the synergistic anthropogenic threats of land-use change and indirect effects of climate change. In Panama, rapid land use conversion coupled with climate change is predicted to negatively impact jaguar (Panthera onca) and puma (Puma concolor). This dissertation examined the environmental variables and scales influencing jaguar and puma habitat selection by season (annual, wet, and dry), using multi-scale optimized habitat suitability models and a machine-learning algorithm (Random Forests), in the narrowest section of Panama. The models derived from the data of an intensive …

Effects Of Various Toxeat$^{®}$ Concentrations On Growth Performance, Immune Response, Cecal Microflora, And Gut Morphology In Broilers Fed With Aflatoxin Contaminated Diets, Soheila Sarrami, Parvaneh Jafari, Maryam Tajabadi Ebrahimi, Seyed Naser Mousavi, Seyed Abdollah Hosseini

Turkish Journal of Veterinary & Animal Sciences

This study was conducted to investigate the effects of Toxeat$^{®}$, a mycotoxin binder, on functional indices, immune response, intestinal microflora, and gut morphology in broiler chickens fed aflatoxin-contaminated diets. Three hundred Cobb 500 broilers were randomly divided into 6 treatments with 5 replicates, each with 10 birds. The treatments included T1: negative control (NC), T$_{2:}$ T1 + 1 g/ton aflatoxin (positive control: PC), T$_{3:}$ PC + 1 kg/ton Toxeat$^{®}$, T$_{4:}$ PC + 2 kg/ton Toxeat$^{®}$, T$_{5:}$ PC + 3 kg/ton Toxeat$^{®}$, T$_{6:}$ PC + 1 kg/ton Toxeat$^{®}$ without hydrated sodium calcium aluminosilicate. Growth performance, immune system response, and lactic acid …

Quality Characteristics And Fatty Acid Profiles Of Bafra, Akkaraman, Andbafra × Akkaraman F$_{1}$ Lamb Meat, Büşra Yaranoğlu, Ceyhan Özbeyaz

Turkish Journal of Veterinary & Animal Sciences

The meat quality of Akkaraman, Bafra, and Bafra × Akkaraman F$_{1}$ (BAF$_{1}$) lamb genotypes was determined and then compared at slaughter weights of 34 and 42 kg. At the beginning of the study, 36 male lambs were fed intensively after weaning at approximately 3 months of age. Six animals of each genotype were slaughtered at each slaughter weight and certain meat quality characteristics, namely meat color, pH, cooking loss, tenderness, water holding capacity, and fatty acid profile, were investigated. The pH values of the M. longissimus dorsi (MLD) for the Bafra, Akkaraman, and BAF$_{1}$ genotypes at 24 h after slaughter …

Evaluation Of The Attitudes Of Veterinary Students Towards Cancer In Animals Using A Cancer Attitude Scale For Animals, İbrahi̇m Kiliç, İbrahi̇m Demi̇rkan, Aysun Çevi̇k Demi̇rkan, Si̇nan Saraçli

Turkish Journal of Veterinary & Animal Sciences

The aim of this descriptive study was to examine the attitudes of veterinary undergraduate students towards cancer in animals with cognitive, affective, and behavioral dimensions by a new cancer attitude scale for animals approach. Questionnaires, as data collection tools, were applied to 205 students training to be veterinary surgeons at Afyon Kocatepe University, Faculty of Veterinary Medicine, who were selected by systematic random sampling method. Validity-reliability analysis and t-test as well as ANOVA were used in addition to descriptive statistics for the data analysis. The students? general attitudes to cancer were (X = 3.65) greater than the midscore, 3, according …

Determination Of The Causal Relationship Between Beef Prices And The Consumer Price Index In Turkey, Ahmet Cumhur Akin, Mustafa Bahadir Çevri̇mli̇, Mehmet Saltuk Arikan, Mustafa Agah Teki̇ndal

Turkish Journal of Veterinary & Animal Sciences

The rising prices of beef meat have recently restricted its accessibility for consumers who need to consume it for a balanced and healthy diet. Speculations have been made about the increase in beef meat prices being one of the major factors underlying the increase in the consumer price index (CPI). In this scope, the causal relationship between the monthly average prices of beef and the rate of year-on-year change in the CPI for the period between January 2005 and February 2018 was analyzed in the study. Since time series data were used, the augmented Dickey?Fuller and Phillips-Perron tests were conducted …

The Coexistence Of Heart Murmurs And Arrhythmias In An Equine Hospital Population ? A Retrospective Study, Ali̇ Cesur Onmaz, Vehbi̇ Güneş, Alexandra Pavaloiu, René Van Den Hoven

Turkish Journal of Veterinary & Animal Sciences

This study was performed to characterize the coexistence of valvar insufficiencies of the mitral, tricuspid, aortic, and pulmonary valves and their possible association with atrial fibrillation in an equine clinic population. During an 11-year period, 348 horses had been examined for cardiac arrhythmias and suspected defects of the cardiac valves at the Vetmeduni Vienna, Austria. The study population included 256 male and 92 female horses. A subpopulation of 197 (57%) horses was identified with at least one valvular disorder. In these horses, mitral valve regurgitation (MR) was reported in 124 animals (63%), aortic valve regurgitation (AR) in 101 (51%), tricuspid …

Productive Response To Two Concentrate Allocation Strategies In Dairy Cows Grazing With Restricted Pasture Allowance, Gustavo Bretschneider, Eloy Salado, Alejandra Cuatrin, Juan Mattera, Mariela Pece, Dario Arias, Maira Cuffia, Virginia Dieguez

Turkish Journal of Veterinary & Animal Sciences

The objective of this study was to compare the effects of two concentrate allotment strategies on the performance of dairy cows grazing on restricted pasture and supplemented with conserved forage. Dairy cows fed equal amounts of concentrate (fixed daily rate: 5.5 kg DM/cow) were compared to cows supplemented with concentrate according to their lactation stage as follows: 10.0, 5.0, and 1.5 kg DM/cow daily during early, mid, and late lactation, respectively (average daily dose: 5.5 kg DM/cow). There was a supplementation strategy × lactation stage interaction (P < 0.05) for energy-corrected milk (ECM). For early lactation cows, supplementation at a variable rate increased ECM yield by 14.61% (P < 0.05). There was a supplementation strategy × lactation stage interaction (P < 0.05) for body weight change. At late lactation stage, cows supplemented at a fixed rate gained weight (+ 0.16 kg/day), whereas those supplemented at a variable rate lost weight (- 0.08 kg/day; P < 0.05). No significant effect was found for body condition score. The prioritization of milk production rather than the attenuation of body reserve mobilization suggests that concentrate allowance based on lactation stage may be unsuitable for minimizing the negative energy balance in early lactation cows.

Microsatellite Panels For Parentage Testing Of Kilis Goats Reared In Turkey, Mahmut Keski̇n, Onur Yilmaz, Zühal Gündüz, Nezi̇h Ata, Sabri̇ Gül, İbrahi̇m Cemal, Orhan Karaca, Süleyman Ercüment Önel

Turkish Journal of Veterinary & Animal Sciences

The aim of this study was to develop PCR-based suitable microsatellite marker panels for paternity testing and to define pedigree errors in Kilis goats. A total of 137 head of goats were used, consisting of 118 head of kids and 19 head of possible candidate sires. A total of 392 alleles were observed in 22 microsatellite markers. Allele numbers ranged between 12 (SRCRSP7) and 24 (BM1818, INRA0023, and SRCRSP15) with an average of 17.82. The mean value of the effective allele numbers was obtained as 9.44. The overall polymorphic information content value was quite high (0.88). The overall observed (Ho) …

Phylogenetic Relationships Of Native Turkish Cattle Breeds Using Microsatellite Markers, Yusuf Özşensoy, Ercan Kurar, Müge Doğan, Zafer Bulut, Mehmet Ni̇zamlioğlu, Ayşe Işik, Aysun Çamlidağ, Vahdetti̇n Altunok

Turkish Journal of Veterinary & Animal Sciences

A total of 20 microsatellite DNA markers were used for genetic characterization and determination of phylogenetic relationships of native cattle breeds of Turkey, including the Anatolian Grey (AG), Anatolian Black (AB), South Anatolian Red (SAR), East Anatolian Red (EAR), Southern Anatolian Yellow (SAY), and Zavot (ZAV). DNA samples were isolated from 271 blood samples using an organic method. Amplified polymerase chain reaction products were separated by capillary electrophoresis and genotypes were determined for 20 microsatellites. A total of 269 different alleles were determined. The lowest (7.80) and highest (10.80) mean allele numbers were observed for the ZAV and SAY populations, …

A Case Of Ex Vivo Boosted Immune Cell Therapy For Chronic Ulcerative Dermatitis In A Dog, Seulgi Bae

Turkish Journal of Veterinary & Animal Sciences

A 13-year-old castrated male Shih Tzu was presented with recurrent otitis externa and ulcerative dermatitis. Previous investigations had failed to identify the cause, and the lesion was resistant to treatment. According to the histopathological examination, a tentative diagnosis of chronic ulcerative dermatitis with bacterial infection was made. To treat the patient, immune cell therapy with antibiotics was conducted every 2 weeks, for a total of six sessions. After treatment, the skin lesion resolved. No side effects were observed during therapy. To the best of our knowledge, this is the first case report of the use of immune cell therapy for …

Influence Of Rearing Conditions And Birth Season On Calf Welfare In The First Month Of Life, Ljiljana Samolovac, Slavca Hristov, Branislav Stankovic, Radojka Maletic, Renata Relic, Zvonko Zlatanovic

Turkish Journal of Veterinary & Animal Sciences

The aim of this study was to analyze the influence of farm conditions and season of birth on body mass, respiratory system diseases and diarrhea occurrence, and mortality during the first month of calves? life. The study was conducted on two tie-stall-system farms with intensive milk production and similar nutrition of dairy cows, but with differences in rearing conditions of calves in the first week of life. The calves were tied on lying area with straw as bedding material (farm A) or free in individual boxes with straw bedding (farm B). In the first consumption, they take 1-2 L of …

Management Of A Coxiella Burnetii-Infected Sheep Flock After An Outbreak Of Q Fever In Humans, Jana Avbersek, Mateja Pate, Andrej Skibin, Matjaz Ocepek, Brane Krt

Turkish Journal of Veterinary & Animal Sciences

Following an outbreak of Q fever in a group of students who contracted the infection during a training course on a sheep farm, a detailed investigation of the sheep flock involved was conducted. Of 478 flock animals, 60 Coxiella burnetii ELISA-positive and 60 ELISA-negative ewes were selected for the trial and divided into four groups. A month after the initial ELISA screening, all ewes in the flock (except the control group) were vaccinated. Sequentially collected blood samples were tested with ELISA and PCR; feces, milk, manure, bedding, and soil were tested with PCR. The immune response to the vaccination was …

Formation Of Local Protection Of The Respiratory Tract In Holstein Calves, Yuriy Alekhin, Maksim Zhukov, Valentina Morgunova, Galina Chusova, Irina Klementeva

Turkish Journal of Veterinary & Animal Sciences

The processes of formation of the local protection of the respiratory tract in nasal secretion samples of Holstein calves from birth to 6 months of age that were born from clinically healthy cows were examined. Only clinically healthy animals were involved in the experiment. Nasal secretion samples were collected with the help of a sterile foam tampon with a fixing thread in order to assess local immunity in animals at the age of 1, 5, 10, 30, 60, 90, 120, 150, and 180 days. Total protein, mucin, lysozyme activity, and alkaline phosphatase (ALP) were determined using commercially available methods. The …

The Effect Of Laying Period On Egg Quality Traits And Chemical Composition Of Lindovskaya (Linda) Geese Reared Under Breeder Conditions, Mehmet Sari, Kadi̇r Emre Buğdayci, Aykut Asim Akbaş, Mustafa Saatci, Mustafa Numan Oğuz

Turkish Journal of Veterinary & Animal Sciences

The study was conducted to determine the effect of laying period on egg quality traits as well as the chemical composition of Lindovskaya geese. The egg quality traits were examined by randomly taking a total of 90 eggs on the 45th ± 5, 60th ± 5, and 75th ± 5 days of the laying period from 3-year-old female Lindovskaya geese. It was determined that the effect of the laying period on external quality traits of eggs was statistically nonsignificant (P > 0.05). The effect of laying period on internal quality traits including height, diameter, and index of the yolk and albumen …

Histomorphological And Histochemical Structure Of The Midgut And Hindgut Of The Caucasian Honey Bee (Apis Mellifera Caucasia), Ahmet Ceylan, Sedat Sevi̇n, Özge Özgenç

Turkish Journal of Veterinary & Animal Sciences

The Caucasian honey bee (Apis mellifera caucasia subspecies of Apis mellifera L.) is one of the most common and prominent honey bee breeds in Turkey. The morphometry of endemic honey bee breeds has been extensively studied, but little attention has been given to the microscopic morphology of these bees. The aim of the current study was to describe for the first time the histomorphology of the midgut and hindgut of the Caucasian honey bee in Turkey. A total of 20 local Caucasian adult honey bee workers were sampled for histomorphological and histochemical analysis. The midgut epithelium consisted of epithelial cells …

Development Of Spermatogonial Stem Cell Niche And Immunoexpression Of Vimentin Filaments In The Testes Of Prenatal And Postnatal Indian Buffalo (Bubalus Bubalis), Ashritha Quanisha Carlo, Devendra Pathak, Opinder Singh, Neelam Bansal

Turkish Journal of Veterinary & Animal Sciences

In this study, we established the components of the buffalo spermatogonial stem cell (SSC) niche in prenatal (38.5-280 days of gestation), neonatal, prepubertal, and adult testes histochemically and immunohistochemically. Immunohistochemically, the changes in vimentin expression were evaluated. During prenatal life, the niche of primordial germ cells was formed by the surrounding mesenchymal cells and fibroblasts. The basement membrane (BM) was not organized at this stage. At 7.6 cm crown-rump length, testicular cords with a thin BM were seen. At the late gestational period, testicular cords with well-organized BM were seen. At the neonatal stage, the testicular cords were lined with …

Shade Trees Preserve Avian Insectivore Biodiversity On Coffee Farms In A Warming Climate, Sarah L. Schooler

Cal Poly Humboldt theses and projects

Coffee is an important export in many developing countries, with a global annual trade value of $100 billion. Climate change is projected to drastically reduce the area where coffee is able to be grown. Shade trees may mitigate the effects of climate change through temperature regulation for coffee growth, temperature regulation for pest control, and increase in pest-eating bird diversity. The impact of shade on bird diversity and microclimate on coffee farms has been studied extensively in the Neotropics, but there is a dearth of research in the Paleotropics. I examined the local effects of shade on bird presence and …

Relationship Between Habitat And Barn Owl Prey Delivery Rate And Composition In A Napa Valley Vineyard Agroecosystem, Dane A. R. St. George

Cal Poly Humboldt theses and projects

The provision of habitat for natural enemies of agricultural pests is common in integrated pest management approaches globally but has rarely been examined for vertebrate predators controlling vertebrate pests. To mitigate the economic and environmental costs of treating for rodent pests, winegrape producers in Napa Valley, California, have installed nest boxes to attract barn owls (Tyto alba) to their properties, but their effectiveness to control rodent pests in vineyards has not been thoroughly tested. A rigorous estimate of the number of rodents barn owls remove from the landscape is a necessary first step, and this study aimed to …

A Comparative Study Of Equine Gut Microbiomes Using 16s And 18s Rrna Sequencing, Jillian Jorgenson

Undergraduate Honors Thesis Projects

The gut microbiome of domestic horses (Equus ferus caballus) can be broken down into two primary divisions of interest: (1) prokaryotic composition, consisting of bacteria and archaea and (2) fungal composition. Within the gut, there are also eukaryotic parasite communities that may interact with the microbiome. While each has been the subject of various scientific explorations, in this study we analyze the potential interconnectedness of these categories. To determine the extent to which each component of the gut microbiome/parasitic communities influences the other, DNA was extracted and amplified from the fecal samples of eight horses. A combination of …

Demographic, Spatial, And Epigenetic Response Of The Louisiana Waterthrush (Parkesia Motacilla) To Shale Gas Development, Mack W. Frantz

Graduate Theses, Dissertations, and Problem Reports (ETD)

My study centered on a bioindicator songbird, the Louisiana Waterthrush (Parkesia motacilla), hereafter waterthrush, an organism that co-occurs in both forested and aquatic habitat across the aquatic-terrestrial interface. This enabled the opportunity to quantify demographic, spatial, and epigenetic (i.e., DNA methylation) responses in a highly forested watershed of the Central Appalachians, the areas that have undergone the most rapid transformations over the last decade from unconventional shale gas development and activities. I organized my dissertation into 4 parts (Part 1: Introduction, Part 2: Louisiana Waterthrush Demography, Part 3: Spatial Assessment of Louisiana Waterthrush Foraging, Part 4: Louisiana Waterthrush …

Tree Squirrels And Fishers In Northern California: The Effects Of Masting Hardwoods On Stand Use, Andria M. Townsend

Cal Poly Humboldt theses and projects

In western North America, tree squirrels such as western gray (Sciurus griseus) and Douglas squirrels (Tamiasciurus douglasii) are potentially important prey for fishers (Pekania pennanti). Western gray squirrels in particular may be highly ranked due to their large body size. Masting trees including black oak (Quercus kelloggii) and tanoak (Notholithocarpus densiflorus) produce an important food source for tree squirrels; therefore, forest stands containing these trees may be useful to foraging fishers. I hypothesized that; 1) the abundance of western gray and Douglas squirrels in a stand is influenced by the …

A Time- And State-Based Approach To Estimate Winter Movement And Survival Of Juvenile Coho Salmon (Oncorhynchus Kisutch) In Freshwater Creek, California, Nicholas Paul Van Vleet

Cal Poly Humboldt theses and projects

Accounting for life history diversity and overwinter survival of juvenile Coho Salmon is important to inform restoration and recovery efforts for this threatened species. Multiple seaward migration patterns of Coho Salmon have been identified, including spring fry migrants, fall and winter parr migrants, and spring smolt migrants. Previous studies have indicated that spring smolt migrants have low overwinter survival rates while they are rearing in upstream habitats, suggesting that freshwater overwinter survival may be one factor that limits smolt production. However, previous research did not account for the early emigration of fall and winter parr migrants from the study area, …

Contribution Of Juvenile Estuarine Residency In A Bar-Built Estuary To Recruitment Of Chinook Salmon (Oncorhynchus Tshawytscha), Emily Katherine Chen

Cal Poly Humboldt theses and projects

Estuaries are commonly touted as nurseries for out-migrating salmonids, providing higher prey availability than streams, a physiological transition zone, and refugee from marine predators. Yet the diversity of estuaries makes it difficult to generalize the effect they have on salmonid recruitment. In bar-built estuaries, sandbars form at the mouth of rivers during periods of low flow, closing access to the ocean and disrupting outmigration. In this thesis, I evaluated how residency in a bar-built estuary affects the growth, survival, and ultimately recruitment of Chinook salmon (Oncorhynchus tshawytscha) in Redwood Creek, California. I conducted a mark-recapture experiment on out-migrating …

Lead Exposure Of North American Raptors, Vincent A. Slabe

Graduate Theses, Dissertations, and Problem Reports (ETD)

Lead is an anthropogenic threat to terrestrial wildlife, has no physiological benefits, and is considered a neurotoxin. Legislation adopted in many developed countries restricts the uses of lead in consumer and industrial products such as pipe fittings, petrol, paint, and shot for use in waterfowl hunting. However, lead is currently categorized by the United States (US) government as a critical metal and common uses of lead still persist in North America. These include the use of rifle ammunition, shot in upland gamebird hunting, and fishing sinkers. Lead is also a by-product of multiple industrial operations including smelters, coal power plants, …

Validation Of Reference Genes For Quantitative Expression Analysis By Qpcr In Various Tissues Of Date Mussel (Lithophaga Lithophaga), Urska Sivka

Turkish Journal of Zoology

qPCR is a very popular method for identifying nucleotide sequences as a result of its sensitivity and relatively low cost and technical simplicity. Normalization is one of the most important steps in analyzing qPCR data and the use of reference genes is the most common normalization strategy. In the present study five commonly used reference genes (18S, 28S, ef1a, ß-act, and ?-tub) were evaluated for their stability in the mantle, gill, foot, and pallial gland of date mussel (L. lithophaga) in different seasons. Four different software packages were used for evaluation: geNorm, NormFinder, BestKeeper, and RefFinder. Although these programs contain …

All Aspects Of The Toxic Effects Of Lipopolysaccharide On Rat Liver And The Protective Effect Of Vitamin E And Sodium Selenite, Di̇lek Pandir, Sedat Per, Züleyha Doğanyi̇ği̇t, Fati̇h Oğuz Bekdemi̇r, Gülşi̇fe Gök, Ali̇ Demi̇rbağ

Turkish Journal of Zoology

This work was planned to research the effects of lipopolysaccharide (LPS) and/or vitamin E (VE) and sodium selenite (SS), which have antioxidant properties, administered to the liver tissue of male rats. For this purpose, histopathology, immunohistochemistry, antioxidant capacity, terminal deoxynucleotidyl transferase (TdT) dUTP nick-end labeling assay, liver function, and DNA structure tests were performed. The lipid profile was also evaluated in this study. Rats that were administered LPS were treated with VE and/or SS. The liver function tests and lipid profile parameters showed statistically significant changes and histological alterations in the LPS treated groups. The number of cells entering apoptosis …

Two New Species Of Dipoena Thorell, 1869 (Araneae, Theridiidae) From Wuling Mountains, China, Su Fang Yang, Muhammad Irfan, Ping Liu, Xianjin Peng

Turkish Journal of Zoology

Dipoena crescenta sp. nov. and D. lirata sp. nov., both represented by males and females, are described and illustrated from the Wuling Mountains of China. Detailed morphological descriptions of both new species are given. The body and the copulatory organs are photographed and illustrated. A distribution map is provided.