Animal Sciences Commons^™

Quantitative Microbial Risk Assessment For Parts, Ground, And Msc Poultry Product Including Intervention Analysis And Exploration Of Enterobacteriaceae As An Indicator Organism In Poultry Processing, Leigh Ann Parette

Graduate Theses and Dissertations

Samples collected at five different large bird poultry processing facilities over a period of 7 months from prescald to post debone locations were enumerated for Enterobacteriaceae, Salmonella spp., and Campylobacter spp. and the results were used to create Quantitative Microbial Risk Analyses (QMRA) models for parts, ground, and mechanically separated chicken (MSC) products. Sensitivity analyses indicated the points in the process at which reductions would be most advantageous to the endpoint and simulation models were run to test reductions required to meet the current USDA performance standards.

These data were analyzed to determine the reductions from one node (location) to …

Responsiveness Of Cobb Mv × 700 Broilers To Dietary Amino Acid And Energy Density, Craig William Maynard

Graduate Theses and Dissertations

As new broiler crosses are introduced to the industry, it is of paramount importance to understand their nutritional digressions from previous and other modern broilers. In particular, amino acids (AA) and dietary energy have been identified as key drivers of live performance and carcass composition. In addition, increased nutrient density in broiler diets have been linked to an increase in breast muscle myopathies such as white striping and woody breast. Therefore, a series of trials were conducted to determine the responsiveness of live performance, carcass characteristics, and breast muscle myopathies of Cobb MV × 700 broilers to dietary AA and …

Fall Migration And Winter Habitat Use Of Northern Saw-Whet Owls (Aegolius Acadicus) In The Ozark Highlands, Mitchell L. Pruitt

Graduate Theses and Dissertations

Studying movement ecology is important not only in understanding the distribution of a species, but in understanding the magnitude of migration through certain regions, as well as explaining regional differences in demographics. The Northern Saw-whet Owl (Aegolius acadicus) is a small, migratory forest owl found throughout much of North America. Despite being captured widely during fall migration, the species’ movement ecology is poorly understood. Exploratory studies outside the saw-whet owl’s normal range have successfully captured the species during fall migration. In the Ozark Highlands ecoregion of the central United States, their status has been considered vagrant during fall and winter. …

Effect Of Macrograzers (Campostoma Spp. And Faxonius Spp.) On Periphyton In Ozark Streams With Considerations Given To Macrograzer Biomass, Phosphorus, And Season: Mensurative And Manipulative Studies, Kayla R. Sayre

Graduate Theses and Dissertations

Nutrient and benthic algal biomass relationships can guide numeric nutrient criteria development in lotic systems. However, herbivorous macrograzers may confound this relationship by reducing the slope of the positive relationship between nutrients and periphyton biomass in streams. I conducted a mensurative field study to determine if stoneroller and crayfish abundance related to algal biomass at varying nutrient concentrations and manipulated macrograzer presence with electrical exclosures in streams to examine macrograzer effects on algal biomass and understand whether these effects on periphyton varied with total phosphorus (TP) or season. Macrograzer density was quantified across a TP gradient (n=15 streams; range = …

Effect Of Cooking Method On Meat Texture In Normal And Woody Broiler Breast Fillets Using Instrumental Analysis And Descriptive Sensory Analysis, Lynda D. Combs

Graduate Theses and Dissertations

Over the past few decades, broiler breast meat has changed in terms of meat quality. Meat quality has deteriorated with the rise in the occurrence of muscle myopathies. Conditions such as woody breast, which is described as pale and bulging areas of distinct hardness, compromise both the textural and technological traits that have been associated with breast meat. The Meullenet-Owens Razor Shear (MORS) method is a common method for indirectly assessing poultry meat tenderness. A blunt version of the MORS (BMORS) has been shown to be a more sensitive method at higher degrees of toughness. A slightly larger stainless steel …

The Evaluation Of Genetic And Phenotypic Differences Associated With Short Term Selection Of Four Different Feed Efficiency Strategies In Japanese Quail, Alex David Gilley

Graduate Theses and Dissertations

The concept of feed efficiency (FE), one unit of feed required to improve one unit of desired output, is relatively simple. However multiple outputs are desired in a commercial poultry breeding program, resulting in the need for nutrients to be partitioned in a particular manner. At the broadest level, nutrients are partitioned between production and maintenance requirements. The requirements for production and maintenance varies between birds. It is the poultry breeder’s responsibility to select individuals most aligned with the breeding objective. Irrespective of the breeding objective, various related and non-related traits influence a bird’s FE. To effectively improve FE, the …

Optimizing Methods To Determine Metabolizable Energy Values Of Feed Ingredients For Broilers, Skyler P. West

Graduate Theses and Dissertations

Determination of metabolizable energy (ME) and amino acid (AA) digestibility values of single feed indigents continues to be two of the most important aspects for successful least-cost poultry feed formulation. It would be advantageous if a common diet type could be utilized to determine both ME and AA digestibility values of feed ingredients within a single assay. Two experiments were conducted to evaluate the effect of basal diet type and excreta collection method on the ME value of single feed ingredients determined in broiler chicks using the regression method. In experiment 1, the objective was to investigate the influence of …

Efficacy Of Natural Compounds With Novel Carrier Systems For Controlling Campylobacter Jejuni In Post-Harvest Poultry, Sandip Shrestha

Graduate Theses and Dissertations

Campylobacter jejuni, a leading cause of bacterial gastroenteritis worldwide, is strongly associated with the consumption and/or mishandling of raw contaminated poultry products. Thus, interventions aiming to reduce C. jejuni counts on poultry products could greatly reduce the incidence of human campylobacteriosis. In the first study, the efficacy of a generally recongnized as safe (GRAS) compound, carvacrol (CR; derived from oregano oil), as an antimicrobial wash treatment to reduce C. jejuni on chicken skin was evaluated. Three delivery systems of CR: suspension, emulsion and nanoemulsion were used. C. jejuni counts were reduced up to 4 log10 cfu/sample by 2% dose of …

Assessment Of A Nutritional Rehabilitation Model In Two Modern Broilers And Their Jungle Fowl Ancestor: A Model For Better Understanding Childhood Undernutrition, Mikayla Baxter

Graduate Theses and Dissertations

The World Health Organization, estimated that 22.9% of children under the age of 5 are stunted. The etiology of stunting is multifactorial and is associated with poor linear growth, villous atrophy, dysbiosis, and increased intestinal permeability. Inclusion of rye in poultry diets induces nutrient deficiencies and increases intestinal permeability, dysbiosis and decreases growth rates. The objective of this dissertation was to determine if chickens consuming a rye based diet exhibited a similar pathophysiology of stunted children to develop a relevant animal model. Therefore, early or late phase malnutrition was induced determine the effects of malnutrition on performance, bone mineralization, intestinal …

Investigating The Potential Of Plant-Derived Antimicrobials For Controlling Campylobacter Jejuni In Poultry And Poultry Products, Basanta Raj Wagle

Graduate Theses and Dissertations

Campylobacter jejuni infection in humans is strongly associated with the handling and consumption of contaminated poultry products. Interventions reducing C. jejuni contamination in poultry would reduce the risk of subsequent human infections. In the first study, the efficacy of a Generally Recognized as Safe (GRAS) compound, eugenol (EG; derived from cloves), as an antimicrobial dip treatment to reduce C. jejuni in postharvest poultry was evaluated. The antimicrobial efficacy of EG was studied in suspension, emulsion and nanoemulsion delivery systems. EG suspension reduced C. jejuni counts with the greatest reduction of >2.0 Log CFU/sample for the 2% dose of EG (P

Effect Of Morinda Citrifolia (Noni)-Enriched Diet On Hepatic Heat Shock Protein And Lipid Metabolism-Related Genes In Heat Stressed Broiler Chickens, Joshua Flees

Graduate Theses and Dissertations

Heat stress (HS) has been reported to alter fat deposition in broilers, however the underlying molecular mechanisms are not well-defined; therefore, the objectives of the current study were to: (1) determine the effects of acute (2 h) and chronic (3 wk) HS on the expression of key molecular signatures involved in hepatic lipogenic and lipolytic programs; and (2) assess if diet supplementation with dried Noni medicinal plant (0.2% of the diet) modulates these effects. Broilers (n=480 males, 1 d) were randomly assigned to 12 environmental chambers, subjected to two environmental conditions (HS at 35°C vs. thermoneutral condition [TN] at 24°C) …

Genomic Approaches To Identify Important Traits In Avian Species, Bhuwan Khatri

Graduate Theses and Dissertations

This dissertation focusses on identifying different molecular markers that have impact on overall poultry production. Chapter one reviews microRNA (miRNA), copy number variation (CNV) and single nucleotide polymorphism (SNP) as markers suggested in different avian species by various studies. It reviews modern genomic approaches that are employed for next generation sequencing data analysis and verification.

Chapter two seeks to identify and validate the muscle specific miRNAs in the breast muscle of modern broilers and its foundational chicken line. Small RNA sequencing was performed to identify differentially expressed mature miRNAs in the breast muscles of these two chicken lines. Results showed …

Effect Of Yeast Supplementation During Various Stages Of Beef Production, Elizabeth Palmer

Graduate Theses and Dissertations

Supplemental dietary yeast products are beneficial during times of stress. Calves experience increased levels of stress during birth, weaning, and the post-weaning receiving period. Therefore, 3 experiments were conducted to determine how yeast supplementation affects growth performance and health during this time. In experiment 1, 2 truckloads of highly stressed calves (n = 175; initial body weight [BW] = 226 ± 24.5 kg) were assigned randomly to 1 of 3 treatments; unsupplemented control, or supplementation with 2 commercial yeast products (Y1 and Y2). Average daily gain (ADG) was not different (P = 0.99) during the 28 d receiving period; nor …

Investigation Of Bacterial Taxa As Biomarkers Of Fescue Toxicosis And Heat Stress In Grazing Beef Cows, Sarah Katherine Chewning

Graduate Theses and Dissertations

Fescue toxicosis in grazing beef cattle is caused by consumption of Ergot alkaloids associated with tall fescue (toxic fescue) and is responsible for substantial economic loss to the U.S. beef industry. Cattle consuming toxic fescue suffer adverse physiological responses, such as: hyperthermia, increased respiration rate (RR), poor reproduction and growth performance. Other adverse responses to fescue toxins include the retention of a winter hair coat and vasoconstriction in the extremities, which can lead to tissue necrosis. Identifying cattle with reduced susceptibility to fescue toxins would allow for efficient use of fescue pastures; thus, the objectives of this thesis was to: …

Microbiome Of Commercial Broilers Through Evisceration And Immersion Chilling, John A. Handley

Graduate Theses and Dissertations

The United States poultry industry generated 38.6 billion pounds (17,500 metric ton) of meat in 2014 which averaged to 121 pounds (55 kg) per individual of the U.S that same year. Of that meat generated by the poultry industry, an estimated 1 million cases of Salmonellosis will occur. Out of the 1 million cases approximately 40, 000 to 50,000 will be confirmed cases by the CDC. Recently, the USDA has requested changes in the inspection process and are currently allowing processors more freedom to utilize innovation to drive the increase in safer and more desirable foods. The new standards set …

Zinc Injection As A Novel Castration Method And Carry-Over Effects Of Growth-Promoting Implants In Beef Cattle, Jase Joseph Ball

Graduate Theses and Dissertations

In experiment 1, crossbred bull calves (n = 31; body weight (BW) = 114.3 ± 26.3 kg; age = 119 ± 18.4 d) were allocated to treatments by BW and birthdate. Twenty-seven bull calves were allocated to 3 injectable castration treatments (n = 9 calves/injectable castration treatment) to reflect 3 dosage levels of zinc. Intact bulls had greater (P < 0.001) serum testosterone concentrations compared to bulls injected with zinc. In experiment 2, crossbred beef bulls (n = 180) were blocked by initial BW (337 ± 10.9 kg; 6 blocks) and assigned randomly to 1 of 3 treatments on d 0: 1) INJ; received 1 mL (100 mg Zn) of a Zn solution in each testis, 2) BAN; banded, 3) BUL; intact. Final BW was greater (P < 0.01) for INJ (672 kg) and BUL (686 kg) compared to BAN (611 kg). Serum haptoglobin concentration was greater (P < 0.01) in INJ compared to BUL and BAN on d 1, 3, 5, and 7. Zinc injection resulted in sterilization but not castration in feedlot bulls although it was efficacious in castration of young bulls at branding. In experiment 3, crossbred beef steers (n = 106; BW = 96 ± 3.9 kg; age = 74 ± 2.0 d) were blocked by parity of dam (≤ 2 or > 2 parities), stratified by BW, calf age, calf sire, cow BW and body condition score to 1 of 4 treatments: 1) RALG, Ralgro, Ralgro, Revalor XS, at branding (D 0), weaning (D 156), and feedlot processing (D 325), 2) COMP, Component …

Towards Quantifying Relevant Land Cover Change: A Case Study In The Central Flyway Of The Monarch Butterfly, Hanna Lenee Ford

Graduate Theses and Dissertations

Over the past 20 years notable decreases in monarch butterfly populations have led researchers to begin evaluating the landscape for changes and seeking out opportunities for enacting conservation programs to better support their survival. The monarch butterfly has recently come under consideration for listing under the Endangered Species Act which has created a need for a more informed view of the landscape through which the migrate and breed, the central United States. In this research three spatially-explicit models are explored using the most applicable datasets currently available to address pressing policy and land manager decisions regarding monarch butterfly and pollinator …

Evaluation Of The Efficacy Of A Candidate Turkey Dermatitis/Cellulitis Oil Emulsion Vaccine On Immune Response, Morbidity, And Mortality Under Laboratory And Commercial Conditions, Brittany Danielle Graham

Graduate Theses and Dissertations

Alpha-toxigenic Clostridium septicum (CS), the cause of turkey cellulitis, results in devastating mortality with high costs for the industry. Various vaccinations have been evaluated to prevent this disease with moderate success. Ability of a CS bacterin-toxoid, in conjunction with adjuvants such as aluminum hydroxide, mannoslyated chitosan, or a water-in-oil Seppic Montanide 71 R VG adjuvant (OE) to induce immunity was evaluated in a 7-week study (Experiment 1). Poults (20/group) were vaccinated day-of-hatch, boosted at 5 weeks-of-age and compared to unvaccinated controls. Antibody titers were determined by ELISA for all experiments. In experiment 1, initial vaccination with OE resulted in significantly …

Evaluation Of The Effects Of Formaldehyde On Growth Parameters Of Broiler Chicks, Paula Johnson

Graduate Theses and Dissertations

Formaldehyde has been used as a disinfectant in poultry hatching cabinets to aid in controlling key pathogenic organisms, such as Salmonella and Escherichia coli (E.coli). There is some evidence that prolonged exposure of chicks to formaldehyde can reduce tracheal ciliary function and thus reasons to believe that exposure to formaldehyde, in the absence of pathogen challenge, may reduce chick vitality. It has been found that elevated temperatures during incubation may adversely affect body weights of broiler chicks, as well as post-hatch environmental heat stress on performance in poultry. Post-hatch environmental heat stress has been shown to impact performance in poultry. …

The Effects Of Super-Dosing Phytase On Nursery And Grower Pigs, Joshua Paul Knapp

Graduate Theses and Dissertations

To determine the effects of super-dosing on pigs fed phosphorous and calcium adequate or deficient diets (Experiment 1); the optimum level of corn express phytase (CEP, Experiment 2); and the effects of xylanase/phytase on growth performance (Experiment 3) in pigs fed reduce nutrient diets, weaned pigs were blocked with initial body weight (BW) and allotted to dietary treatments. Treatments were: Positive control (PC), P/Ca adequate diets (NRC 2012); Negative Control (NC), low P (-0.15%) and Ca (-0.12%), +0, 1000, and 4000 FTU/kg of CEP in both PC and NC (Experiment 1); PC, P/Ca adequate diets; NC, decreased P (0.15%) and …

Defending Wild Dogs: Population Dynamics And Disease In Endangered African Wild Dogs, Elizabeth Claire Arredondo

Graduate Theses and Dissertations

African wild dogs (Lycaon pictus) are endangered carnivores whose population is decreasing from habitat loss and fragmentation, interspecific competition, and disease. Survival rates are especially low in Kruger National Park (KNP), though it is unclear why. I estimated the abundance in KNP and survival rates over different time spans, six years and nine months, using public photographic survey data. In 2015, there were 298 (SE=12.1) individuals. Using a mark-recapture analysis in program R, I found that the survival rate between 2009-2015 was only 3.2%, and within the 9-month survey period (September 2014 – June 2015), monthly survival rates for the …

Time Series Forecast Analysis In Wholesale Broiler Markets, Christopher R. Sims

Graduate Theses and Dissertations

In 2016 the chicken industry provided nearly 1.2 million jobs, 68 billion dollars in wages, 313 billion dollars in economic activity and 24 billion dollars in government revenue (John Dunham & Associates, Inc., 2016). Broiler production has changed dramatically from the early 90’s to the turn of the 21st century. Technological advancements, continuous improvements, production efficiencies and industry changes have made the industry the global market it is today. The poultry industry is an extremely volatile market with prices constantly fluctuating in response to input price volatility and demand and supply changes. These changes are often driven by world economic …

Identifying Genetic Factors Influencing Sperm Mobility Phenotype In Chicken Using Genome Wide Association Studies, Primordial Germ Cell Transplantation, And Rnaseq., Sohita Ojha

Graduate Theses and Dissertations

Sperm mobility is a major determinant of male fertility in chicken. In spite of low heritability of reproductive traits, sperm mobility has high heritability index which suggests presence of quantitative trait loci (QTLs) governing the trait. Our research focused on three objectives: i) to identify the QTLs affecting low mobility phenotype in chicken, ii) to understand the impact of Sertoli-cells and germ cells interactions in influencing the mobility phenotype and iii) to identify the genes and gene networks differentially expressed in male and female PGCs. To detect the QTLs, genome wide association studies (GWAS) was conducted which revealed the presence …

A Study Of The Prevalence Of Gastrointestinal Nematodes In Goats Obtained From Northwest Arkansas, Christine Rose Weingartz

Graduate Theses and Dissertations

Parasitic helminths have always been an issue in small ruminant production; pathogens that pose great negative impact on goat health and productivity. Insufficient work has been done to document the prevalence of parasitic helminths in the United States, especially in the south and southeast, where the largest goat populations are found.

The aim of this study was to survey the prevalence of infections by gastrointestinal nematodes in goats in Northwestern Arkansas. Gastrointestinal tracts were examined from 41 goats of various locations around Northwest Arkansas. Worm species were identified and population burdens were determined. Coprology was correlated with the actual worm …

Experimental Approaches To Understand And Control Salmonella Infection In Poultry, Yichao Yang

Graduate Theses and Dissertations

Salmonella is a major foodborne pathogen around the world and chickens are the major reservoir to transmit Salmonella into the human food chain. For decreasing the infection of Salmonella, we developed six attenuated live vaccines based on Salmonella Enteritidis (SE) and Typhimurium (ST) for testing the cross-serovar and cross-serogroup protection from the challenge of Salmonella Heidelberg and Campylobacter jejuni. One of the constructed vaccine strain showed ability to protect against challenge from Salmonella Heidelberg. Even though some preventive approaches are able to decrease Salmonella colonization in the gastrointestinal tract of chickens or other farm animals, Salmonella transmission mechanisms remain unclear. …

A Comparative Life Cycle Assessment Of Nutritionally Equivalent Meals With And Without Pork, Kelli Young

Graduate Theses and Dissertations

The following report details a life cycle assessment of several dietary and meal scenarios with and without pork. The goal of the LCA was to identify the impacts of greenhouse gas emissions, water use, and land use of pork containing and porkless diets and meal plans in a field-to-fork analysis. The dietary and meal plan scenarios are iso-caloric meaning they contain the same number of calories. The first set of diets is based on a USDA consumption pattern, 2000 kcal per day. This diet was used to create three other dietary scenarios with and without pork. The USDA recommended food …

Effect Of Endophyte-Infected Tall Fescue Toxins On Growth Performance And The Microbial Community In The Rumen And Feces In Pregnant Ewes, Saleh Alrashedi

Graduate Theses and Dissertations

Fifty pregnant Katahdin ewes grazed pastures with high (HE) and moderate (MI) levels of Neotyphodium coenophialum-infected tall fescue between February 1 and May 24 to determine the impacts of tall fescue toxins on body weight (BW), body condition scores, FAMACHA scores, fecal egg counts (FEC), and serum Cu, Zn, prolactin, and non-esterified fatty acids (NEFA). Within those 50 ewes, 15 were selected randomly for fecal and rumen sampling to assess the impacts of HE and MI on the microbiome community. Total bacterial DNA was extracted from rumen and fecal samples, and alpha and beta diversities were used to relate microbiome …

Characterization Of The Thermal Environment During Transport Of Commercial Broiler Chickens, Douglas J. Aldridge

Graduate Theses and Dissertations

Transport of commercial broiler chickens from the farm to the processing plant is perceived to compromise welfare under some circumstances. Research has been conducted using European standard equipment to characterize the environment experienced by poultry during broiler transport. In contrast no studies have been reported on the environment experienced by broilers under United States standard industry practices during transport. Moreover, microenvironment temperatures within industry trailers have not been reported.

The present study characterized the thermal micro-environment experienced by broiler chickens during transport across different seasons. The temperatures were influenced by temperature mitigation practices (plastic wrap, double side board, single side …

Improvement In Simple Artificial Insemination In Sheep Using Chilled Extended Semen And Consideration Of Fertility In Ewes, Mohan Acharya

Graduate Theses and Dissertations

Three studies were conducted to improve simple artificial insemination in sheep using chilled extended semen and evaluate methods to predict fertility in ewes. The first study evaluated the effect of semen extenders and storage temperature on motility parameters of ram semen stored for up to 72 h. Single semen collected from each ram was divided into four parts and extended using four extenders: milk, TRIS, TEST, and CJ-2, diluted to 600 million sperm/ml and loaded into 0.25 ml straws for storage at 4 and 15° C. Most of the CASA motility parameters were higher after extension and storage at 4 …

Evaluating The Impact Of An All-Vegetable Protein Supplement Containing Fat Emulsifiers And Probiotics On Broiler Performance, Jordan Weil

Graduate Theses and Dissertations

Currently, several niche markets, such as organic and “all natural”, are marketed within the poultry industry. However, little research has been undertaken to determine the cost-effectiveness of poultry diets used to produce chicken within these markets. Specifically, the economics and resulting profits associated with raising chicken with antibiotic-free, all-vegetable (AV) diets are not evaluated. As national chain restaurants such as Chick-fil-A and Panera Bread begin to mandate poultry suppliers raise chicken without antibiotics and use AV diets, it becomes increasingly important to evaluate the economics for integrators. Given the rapidly changing feeding strategies necessary to respond to consumers’ and wholesalers’ …