Animal Sciences Commons^™

Genome Editing Using Crispr-Cas9 In Annual Killifish Species, Keria Moritsugu-Vandehey

University Honors Theses

CRISPR-Cas9 genome editing has been used successfully to knock out genes in model organisms such as zebrafish, turquoise killifish, and cichlid fish. CRISPR-Cas9 genome editing has not been verified in the annual killifish, Austrofundulus limnaeus. We hypothesize that targeted editing of the tyrosinase gene in embryos of A. limnaeus will lead to fish without the ability to produce black pigment. Embryos at the 1-cell stage were injected with a Cas9 cocktail containing a mix of guide RNA molecules that target the genomic sequence of the tyrosinase gene and either an mRNA coding for the Cas9 protein or Cas9 protein. …

Supply Is Not Limulus: Research Review Of Horseshoe Crab Conservation In The Face Of Intense Pharmaceutical Demand, Zoya Galeev

University Honors Theses

Horseshoe crabs are being used by the pharmaceutical industry to conduct endotoxin tests using LAL derived from the organism’s blood to ensure safe medical practice. Their annual collection and bleeding, while not always leading to mortality, affects horseshoe crab behavior and health. This research seeks to understand how the American horseshoe crab, L. polyphemus, is being used by pharmaceutical agencies and the implications that their harvesting has on the industry and the conservation of the species. Studies were collected from the past decade across two databases, Web of Science (WOS) and PubMed, to assess present conservation techniques to reduce …

Assessment Of Avian Community Structure And Habitat Connectivity In The Fanno Creek Corridor Bird Surveys, Habitat Assessment, And Management Recommendations, Grace Hall

Environmental Science and Management Professional Master's Project Reports

Urbanization can significantly impact habitat quality and connectivity for avian communities, decreasing species richness and diversity. However, in highly fragmented habitats, urban parks and riparian zones can provide important habitat corridors for birds that facilitate movement and access to essential resources. On the west side of greater Portland, Oregon, Fanno Creek may serve as a habitat corridor for birds and other local wildlife.

Fanno Creek is a 25-kilometer tributary of the Tualatin River that runs through the cities of Portland, Beaverton, Tigard, and Durham in northwestern Oregon. The land surrounding the creek includes residential, commercial, and industrial properties as well …

Oregon State Rank Assessment For Pit Roach (Hesperoleucus Mitrulus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for pit roach (Hesperoleucus mitrulus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Margined Sculpin (Cottus Marginatus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for margined sculpin (Cottus marginatus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Oregon Lakes Tui Chub (Siphateles Bicolor Oregonensis), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Oregon Lakes tui chub (Siphateles bicolor oregonensis) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Malheur Mottled Sculpin (Cottus Bendirei), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Malheur mottled sculpin (Cottus bendirei) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Klamath Lake Sculpin (Cottus Princeps), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Klamath Lake sculpin (Cottus princeps) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Reticulate Sculpin (Cottus Perplexus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for reticulate sculpin (Cottus perplexus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Shorthead Sculpin (Cottus Confusus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Shorthead sculpin (Cottus confusus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Torrent Sculpin (Cottus Rhotheus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for torrent sculpin (Cottus rhotheus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Pistol River Pocket Gopher (Thomomys Bottae Detumidus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Pistol River pocket gopher (Thomomys bottae detumidus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Gold Beach Pocket Gopher (Thomomys Mazama Helleri), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Gold Beach pocket gopher (Thomomys mazama helleri) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Yellow Bumblebee (Bombus Fervidus), Eleanor P. Gaines, Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for yellow bumblebee (Bombus fervidus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Columbia Gorge Oregonian (Cryptomastix Hendersoni), Misty Nelson, Eleanor P. Gaines

Institute for Natural Resources Publications

Oregon state conservation status assessment for Columbia Gorge oregonian (Cryptomastix hendersoni) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Suckley's Cuckoo Bumblebee (Bombus Suckleyi), Eleanor P. Gaines, Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Suckley's cuckoo bumblebee (Bombus suckleyi) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Yellow Bumblebee (Bombus Fervidus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Yellow bumblebee (Bombus fervidus) using NatureServe methodology, 2023.

Oregon State Ranking Assessment For Morrison Bumblebee (Bombus Morrisoni), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Morrison bumblebee (Bombus morrisoni) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Bonneville Redside Shiner (Richardsonius Balteatus Hydrophlox), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Bonnevile redside shiner (Richardsonius balteatus hydrophlox) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Klamath Smallscale Sucker (Catostomus Rimiculus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Klamath smallscale sucker (Catostomus rimiculus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Jenny Creek Sucker (Catostomus Rimiculus Pop. 1), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Jenny Creek sucker (Catostomus rimiculus pop. 1) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Northern Leopard Frog (Lithobates Pipiens), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Northern leopard frog (Lithobates pipiens) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Oak Titmouse (Baeolophus Inornatus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Oak Titmouse (Baeolophus inornatus) using NatureServe methodology, 2024.

The Distribution And Reproductive Success Of The Western Snowy Plover Along The Central And Southern Oregon Coast - 2023, David J. Lauten, Kathleen A. Castelein, Mary Lee, Jacey Corrente, Marty R. Mccamant, Eleanor P. Gaines

Institute for Natural Resources Publications

We monitored the distribution, abundance and productivity of the federally threatened Western Snowy Plover (Anarhynchus nivosus nivosus) along the central and south coast of Oregon from 4 April – 15 September 2023. We surveyed and monitored plover activity in a project area that included, from north to south, Sutton Beach, Siltcoos River estuary, the Dunes Overlook, North Tahkenitch Creek, Tenmile Creek, Coos Bay North Spit, Bandon Snowy Plover Management Area, New River Habitat Restoration Area (HRA) and adjacent lands, and Floras Lake. Our objectives for the project area in 2023 were to: 1) estimate the size of the adult Snowy …

How Beavers (Castor Canadensis) Affect Habitat Availability For Two Native Oregon Turtles: Actinemys Marmorata And Chrysemys Picta Bellii, Rodé Krige

University Honors Theses

Oregon is home to two native freshwater turtle species: the northwestern pond turtle and the western painted turtle. Both turtles are Oregon conservation strategy species with a status rating of sensitive, indicating declining populations. Oregon's decline in these turtle's populations is thought to be predominantly due to loss and degradation of habitat that results from development and urbanization. Beavers' ability to dam streams and create ponds may be creating habitat usable by turtles, but the relationship is under-studied. This study assessed water temperature, basking habitat, and overall turtle habitat suitability at beaver-dammed and control ponds in Portland, Oregon. Average basking …

Oregon State Rank Assessment For Stumptown Scud (Ramellogammarus Similimanus), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for stumptown scud (Ramellogammarus similimanus) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Oregon Plant Bug (Lygus Oregonae), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Oregon plant bug (Lygus oregonae) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Haddock's Rhyacophilan Caddisfly (Rhyacophila Haddocki), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Haddock's rhyacophilan caddisfly (Rhyacophila haddocki) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Wahkeena Falls Flightless Stonefly (Nanonemoura Wahkeena), Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Wahkeena Falls flightless stonefly (Nanonemoura wahkeena) using NatureServe methodology, 2023.

Oregon State Rank Assessment For Roth's Blind Ground Beetle (Pterostichus Rothi), Eleanor P. Gaines, Misty Nelson

Institute for Natural Resources Publications

Oregon state conservation status assessment for Roth's blind ground beetle (Pterostichus rothi) using NatureServe methodology, 2023.