Animal Sciences Commons^™

The Evolutionary Dynamics Of Infectious Diseases On An Unstable Planet: Insights From Modeling The Stockholm Paradigm, Angie T.C. Souza, Sabrina B.L. Araujo, Walter A. Boeger

MANTER: Journal of Parasite Biodiversity

Emerging infectious diseases (EIDs) are, besides a question of food safety and public health, an ecological and evolutionary issue. The recognition of this condition combined with the accumulation of evidence that pathogens are not specialists in their original hosts evidences the need for understanding how the dynamics of interaction between pathogens and hosts occurs. The Stockholm Paradigm (SP) provides the theoretical fundaments to understand the dynamics of diseases and design proactive measures to avoid the emergence and reemergence of infectious diseases. In this review, we revisit the models that evaluate several aspects of the proposed dynamics of the SP, including …

Reconstructing The Ecological Relationships Of Late Cretaceous Antarctic Dinosaurs And How Functional Tooth Morphology Influenced These Relationships, Ian D. Broxson

2022 Symposium

The Sandwich Bluff Formation of the James Ross Basin of Antarctica has recently yielded a group of five late Cretaceous dinosaurs that lived contemporaneously with each other, a first for Antarctica. These five dinosaurs include fragmentary remains of two differently sized elasmarian ornithopods, a possible megaraptor, a hadrosaur, and a nodosaur. In this study we will construct a model of the ecological relationships of late Cretaceous Antarctica. Additionally, we will look at what specific factors allowed this group of four herbivores and a carnivore to coexist in a restricted locality and what niches were filled by each species. Methods to …

Population Genomic Transformations Induced By Isolation Of Wild Bird Avian Influenza Viruses (Orthomyxoviridae) In Embryonated Chicken Eggs, Matthew W. Hopken, Antoinette J. Piaggio, K. L. Pabilonia, James Pierce, Theodore Anderson, Courtney Pierce, Zaid Abdo

USDA Wildlife Services: Staff Publications

Isolation and cultivation of wild-type viruses in model organism cells or tissues is standard practice in virology. Oftentimes, the virus host species is distantly related to the species from which the culture system was developed. Thus, virus culture in these tissues and cells basically constitutes a host jump, which can lead to genomic changes through genetic drift and/or adaptation to the culture system. We directly sequenced 70 avian influenza virus (Orthomyxoviridae) genomes from oropharyngeal/cloacal swabs collected from wild bird species and paired virus isolates propagated from the same samples following isolation in specific-pathogen-free embryonated chicken eggs. The data were analyzed …

Environmental Variability Supports Chimpanzee Behavioural Diversity, Ammie K. Kalan, Lars Kulik, Mimi Arandjelovic, Christophe Boesch, Fabian Haas, Paula Dieguez, Christopher D. Barratt, Ekwoge E. Abwe, Anthony Agbor, Samuel Angedakin, Floris Aubert, Emmanuel Ayuk Ayimisin, Emma Bailey, Mattia Bessone, Gregory Brazzola, Valentine Ebua Buh, Rebecca Chancellor, Heather Cohen, Charlotte Coupland, Bryan Curran, Emmanuel Danquah, Tobias Deschner, Dervla Dowd, Manasseh Eno-Nku, J. Michael Fay, Annemarie Goedmakers, Anne-Celine Granjon, Josephine Head, Daniela Hedwig, Veerle Hermans, Kathryn J. Jeffery, Sorrel Jones, Jessica Junker, Parag Kadam, Mohamed Kambi, Ivonne Kienast, Deo Kujirakwinja, Kevin E. Langergraber, Juan Lapuente, Bradley Larson, Kevin C. Lee, Vera Leinert, Manuel Llana, Sergio Marrocoli, Amelia C. Meier, Bethan Morgan, David Morgan, Emily Neil, Sonia Nicholl, Emmanuelle Normand, Lucy Jayne Ormsby, Liliana Pacheco, Alex Piel, Jodie Preece, Martha M. Robbins, Aaron S. Rundus, Crickette Sanz, Volker Sommer, Fiona Stewart, Nikki Tagg, Claudio Tennie, Virginie Vergnes, Adam Welsh, Erin G. Wessling, Jacob Willie, Roman M. Wittig, Yisa Ginath Yuh, Klaus Zuberbuhler, Hjalmar S. Kuehl

Anthropology & Sociology Faculty Publications

Large brains and behavioural innovation are positively correlated, species-specific traits, associated with the behavioural flexibility animals need for adapting to seasonal and unpredictable habitats. Similar ecological challenges would have been important drivers throughout human evolution. However, studies examining the influence of environmental variability on within-species behavioural diversity are lacking despite the critical assumption that population diversification precedes genetic divergence and speciation. Here, using a dataset of 144 wild chimpanzee (Pan troglodytes) communities, we show that chimpanzees exhibit greater behavioural diversity in environments with more variability - in both recent and historical timescales. Notably, distance from Pleistocene forest refugia is associated …

Evolutionary Analyses Of Phylum Chaetognatha Based On Mitochondrial Cytochromeoxidase I Gene, Sam Peter, Manojkumar Bhaskaran Nair, Devika Pillai

Turkish Journal of Zoology

Chaetognaths (arrow worms) are an enigmatic group of transparent planktonic invertebrates and play an important role in the marine food web. Their morphological and developmental features have raised extensive debates since the discovery of the phylum in the 18th century. Uncertainty in the phylogenetic placement of certain chaetognath species still exists and is puzzling many scientists who have tried to clarify this task. Studies using a portion of both small subunit ribosomal ribonucleic acid (SSU rRNA) and large subunit ribosomal ribonucleic acid (LSU rRNA) genes when integrated with conventional taxonomy were contributed to resolve taxonomical issues in this group. Here …

The Evolution And Development Of Chiropteran Flight, Emmaline Willis

Honors Theses and Capstones

No abstract provided.

The Evolution Of Dragons, Laura J. Mayfield

Undergraduate Theses, Professional Papers, and Capstone Artifacts

Dragons have been depicted in human art as early as 4500 BCE. For centuries, these fantasy creatures have inspired countless folk and fantasy tales, as well as appearing in the art of different cultures around the world. Now there are thousands of different depictions of these huge, flying, fire-breathing lizards, but are any of them possible? In this study, I reference peer-reviewed scientific articles, phylogenetic analysis, and paleoart studies to create biologically-sound dragons. Basing the dragon lineage on a real branch of webbed-winged scansoriopterygids—an extinct family of climbing and gliding maniraptoran dinosaurs—I explored the possible wing-structure, fire-breathing abilities, and effects …

Octopi-Ing A Unique Niche In Comparative Psychology, Jennifer Vonk

Animal Sentience

Mather’s work has been fundamental in informing scientists of the relatively mysterious behavior and cognition of an understudied group of animals – the cephalopods. This work helps to fill a gap in the comparative literature that has historically sought evidence for complex behavior only in species that are closely related to humans or share important ecological features such as social complexity.

Our Brains Make Us Out To Be Unique In Ways We Are Not, Matthew J. Criscione, Julian Paul Keenan

Animal Sentience

Humans have long viewed themselves in a favorable light. This bias is consistent with a general pattern of self-enhancement. Neural systems in the medial prefrontal cortex underlie this way of thinking, which, even when false, may be beneficial for survival. It is hence not surprising that we often disregard contrary evidence in believing ourselves superior.

Digging Biomechanics In Geomyoid Rodents, Alexis Moore Crisp

UNLV Theses, Dissertations, Professional Papers, and Capstones

Subterranean digging behaviors provide opportunities for protection, access to prey, and predator avoidance for a diverse array of vertebrates, yet studies of the biomechanics of burrowing have been limited by the technical challenges of measuring kinetics and kinematics of animals moving within a substrate. Prior studies of burrowing have recorded a single axis of x-ray video and/or force. However, empirical observations show that burrowing is not restricted to a single axis or plane. I describe a new system called a ‘tunnel-tube’ for measuring 3D reaction force during burrowing. This tunnel-tube has two separate tubes, one ‘entry tube’ that has no …

Can They Suffer?, Todd K. Shackelford

Animal Sentience

We should treat sentient nonhuman animals as worthy of moral consideration, not because we share an evolutionary history with them, but because they can suffer. As Chapman & Huffman (2018) argue, humans are not uniquely disconnected from other species. We should minimize the suffering we inflict on sentient beings — whether human or nonhuman — not because they, too, are tool-makers or have sophisticated communication systems, but because they, too, can suffer, and suffering is bad.

Animal Suicide: An Account Worth Giving?, Irina Mikhalevich

Animal Sentience

Peña-Guzmán (2017) argues that empirical evidence and evolutionary theory compel us to treat the phenomenon of suicide as continuous in the animal kingdom. He defends a “continuist” account in which suicide is a multiply-realizable phenomenon characterized by self-injurious and self-annihilative behaviors. This view is problematic for several reasons. First, it appears to mischaracterize the Darwinian view that mind is continuous in nature. Second, by focusing only on surface-level features of behavior, it groups causally and etiologically disparate phenomena under a single conceptual umbrella, thereby reducing the account’s explanatory power. Third, it obscures existing analyses of suicide in biomedical ethics and …

The Evolutionary Trend Of Platform Denticulation In Middle Triassic Acuminate Gondolellidae (Conodonta), Pablo Plasencia, Ali̇ Murat Kiliç, Aymon Baud, Milan Sudar, Francis Hirsch

Turkish Journal of Zoology

Acuminate Middle-Late Triassic Gondolellidae are characterized by an ellipsoid platform with a central to posterior amygdaloid basal cavity and an octomembrate apparatus of gondolelloid affinity. Starting with a neospathodiform proteromorph during the Anisian, their anagenetic lineage developed during the Fassanian, Longobardian, and Julian, ending in another neospathodiform proteromorph. As the increase in complexity in the platform denticulation is an important evolutionary trend, three new genera are proposed: Guexispathodus n. gen., Marquezella n. gen., and Kirilella n. gen., which, together with Pseudofurnishius and Mosherella, represent the subfamily Marquezellinae n. subfam.

The Emotional Brain Of Fish, Sonia Rey Planellas

Animal Sentience

Woodruff (2017) analyzes structural homologies and functional equivalences between the brains of mammals and fish to understand where sentience and social cognition might reside in teleosts. He compares neuroanatomical, neurophysiological and behavioural correlates. I discuss current advances in the study of fish cognitive abilities and emotions, and advocate an evolutionary approach to the underlying basis of sentience in teleosts.

Consciousness Is Not Inherent In But Emergent From Life, Jon Mallatt, Todd E. Feinberg

Animal Sentience

Reber’s theory of the cellular basis of consciousness (CBC) is right to emphasize that we should study consciousness (sentience) in its simplest form, taking its evolution into account. However, not enough evidence is presented to support CBC’s unorthodox claim that even simple, one-celled organisms are conscious. As pointed out by other commentators, the CBC seems to be based on outdated ideas about evolution and does not acknowledge that consciousness could be an evolutionary novel feature. Such emergent features are abundant in living organisms. We review our own emergentist solution, in which consciousness evolved in the elaborating nervous systems of the …

Cognitive Continuity In Cognitive Dissonance, David R. Brodbeck, Madeleine I. R. Brodbeck

Animal Sentience

Zentall’s (2016) model of cognitive dissonance is compatible with cognitive continuity between humans and nonhumans. It may help explain cognitive dissonance-like behavior in many species, including humans. It is also consistent with Tinbergen’s (1963) ‘four whys’ in ethological explanation.

How Could Consciousness Emerge From Adaptive Functioning?, Max Velmans

Animal Sentience

The sudden appearance of consciousness that Reber posits in creatures with flexible cell walls and motility rather than non-flexible cells walls and no motility involves an evolutionary discontinuity. This kind of “miracle” is required by all “discontinuity” theories of consciousness. To avoid miraculous emergence, one may need to consider continuity theories, which accept that different forms of consciousness and material functioning co-evolve but assume the existence of consciousness to be primal in the way that matter and energy are assumed to be primal in physics.

“Cellular Basis Of Consciousness”: Not Just Radical But Wrong, Brian Key

Animal Sentience

Reber (2016) attempts to resuscitate an obscure and outdated hypothesis referred to as the “cellular basis of consciousness” that was originally formulated by the author nearly twenty years ago. This hypothesis proposes that any organism with flexible cell walls, a sensitivity to its surrounds, and the capacity for locomotion will possess the biological foundations of mind and consciousness. Reber seeks to reduce consciousness to a fundamental property inherent to individual cells rather than to centralised nervous systems. This commentary shows how this hypothesis is based on supposition, false premises and a misunderstanding of evolutionary theory. The cellular basis of consciousness …

Beginnings: Physics, Sentience And Luca, Carolyn A. Ristau

Animal Sentience

According to Reber’s model, Cellular Basis of Consciousness (CBC), sentience had its origins in a unicellular organism and is an inherent property of living, mobile organic forms. He argues by analogy to basic physical forces which he considers to be inherent properties of matter; I suggest that they are instead the stuff of scientific investigation in physics. I find no convincing argument that sentience had to begin in endogenously mobile cells, a criterial attribute of the originator cell(s)for sentience according to CBC. Non-endogenously mobile cells, (i.e., plants or precursors) in a moving environment would suffice. Despite my concerns and the …

Fish Pain: An Inconvenient Truth, Culum Brown

Culum Brown, PhD

Whether fish feel pain is a hot political topic. The consequences of our denial are huge given the billions of fish that are slaughtered annually for human consumption. The economic costs of changing our commercial fishery harvest practices are also likely to be great. Key outlines a structure-function analogy of pain in humans, tries to force that template on the rest of the vertebrate kingdom, and fails. His target article has so far elicited 34 commentaries from scientific experts from a broad range of disciplines; only three of these support his position. The broad consensus from the scientific community is …

Slavery, Welfare And The Sixth Extinction, Stephen R. Clark

Animal Sentience

Ng’s laudable concern for animal welfare would be welcome to any sensible slave-owner wishing to preserve his investment. What welfarism – for slave-owners and animal husbandmen – fails to call into question is whether we have the right to breed, hold captive and kill animals at all: If it matters, as the widely recognized slogan of ‘Five Freedoms’ suggests, that animals have the chance to live a ‘normal’ life, then more matters than keeping them ‘happy’ in subjection. Their lives – and also the lives of wild things – also deserve respect.

Fish Pain: An Inconvenient Truth, Culum Brown

Animal Sentience

Whether fish feel pain is a hot political topic. The consequences of our denial are huge given the billions of fish that are slaughtered annually for human consumption. The economic costs of changing our commercial fishery harvest practices are also likely to be great. Key outlines a structure-function analogy of pain in humans, tries to force that template on the rest of the vertebrate kingdom, and fails. His target article has so far elicited 34 commentaries from scientific experts from a broad range of disciplines; only three of these support his position. The broad consensus from the scientific community is …

Pain And Fish Welfare, Eliane Gonçalves-De-Freitas

Animal Sentience

The evolutionary approach of Key’s (2016) target article, generically comparing humans with fish of all kinds, is simplistic. The author ignores published research on structural and molecular aspects of pain in fish. The target article reads more like a selective polemic against fish welfare than an even-handed analysis.

Pain-Capable Neural Substrates May Be Widely Available In The Animal Kingdom, Edgar T. Walters

Animal Sentience

Neural and behavioral evidence from diverse species indicates that some forms of pain may be generated by coordinated activity in networks far smaller than the cortical pain matrix in mammals. Studies on responses to injury in squid suggest that simplification of the circuitry necessary for conscious pain might be achieved by restricting awareness to very limited information about a noxious event, possibly only to the fact that injury has occurred, ignoring information that is much less important for survival, such as the location of the injury. Some of the neural properties proposed to be critical for conscious pain in mammals …

The Evolutionary History Of Cetacean Brain And Body Size, Stephen H. Montgomery, Jonathan H. Geisler, Michael R. Mcgowen, Charlotte Fox, Lori Marino, John Gatesy

Lori Marino, PhD

Cetaceans rival primates in brain size relative to body size and include species with the largest brains and biggest bodies to have ever evolved. Cetaceans are remarkably diverse, varying in both phenotypes by several orders of magnitude, with notable differences between the two extant suborders, Mysticeti and Odontoceti.We analyzed the evolutionary history of brain and body mass, and relative brain size measured by the encephalization quotient (EQ), using a data set of extinct and extant taxa to capture temporal variation in the mode and direction of evolution. Our results suggest that cetacean brain and body mass evolved under strong directional …

Life History Evolution And Adaptive Radiation Of Hemidactyliine Salamanders, Travis Ryan, R. Bruce

Travis J. Ryan

T.J. Ryan and R.C. Bruce's contribution to: The Biology of Plethodontid Salamanders, R. C. Bruce, R. G. Jaeger, and L. D. Houck, eds. Kluwer Academic/Plenum Publishers, New York.

Carnivores From The Late Miocene Locality Of Hayranlı (Hayranlı, Sivas, Turkey), Şaki̇r Önder Özkurt, Erksi̇n Güleç, Ahmet Cem Erkman

Turkish Journal of Zoology

The locality of Hayranlı-Sivas is situated in the central Anatolian plateau (Sivas, Turkey) and includes many fossil remains, including carnivores collected from 2 different spots. The aim of this study is to contribute to knowledge of carnivore evolution in Turkey based on the fossil specimens in Hayranlı-Sivas. The studied collection indicates the presence of the following taxa: Hyaenictitherium wongii, Hyaenictitherium intuberculatum, Lycyaena dubia, and Machairodus giganteus. L. Dubia is the first record from Anatolia. The material of each taxon was described and determined by comparison with other materials from various Eurasian localities. During the Early or Middle Turolian 9-7 Ma. …

Integrating, Developing, And Testing Methods To Generate More Cohesive Approaches To Biogeographic Inference, Mallory Elizabeth Eckstut

UNLV Theses, Dissertations, Professional Papers, and Capstones

As a fundamental component of the developing discipline of conservation biogeography, broadscale analyses of biotic assembly and disassembly across multiple temporal and spatial scales provide an enhanced understanding of how geologic transformations and climate oscillations have shaped extant patterns of biodiversity. As with any scientific field, there are limitations in the case of biogeographic historical reconstructions. Historical reconstructions are only as robust as the theoretical underpinnings of the methods of reconstruction (including data collection, quality, analysis, and interpretation). Nevertheless, historical reconstructions of species distributions can help inform our understanding of how species respond to environmental change.

My dissertation takes a …

Determining The Composition Of The Dwelling Tubes Of Antarctic Pterobranchs, Lukasz J. Sewera

Honors Projects

Pterobranchs are a group of marine invertebrates within the Hemichordata, which share characteristics with both chordates and echinoderms. Pterobranchs live in colonies of secreted tubes, coenicia, which are composed of a gelatinous material of unknown composition. Visually, the tubes appear similar to the tunic of tunicates, a group of invertebrates within the Chordata. The nonproteinaceous tunic of tunicates is composed of cellulose, which is unusual. The goal of this study was to determine the composition of the pterobranch coenicium. Some aspects of pterobranch phylogeny are still unclear even after multiple molecular and morphological studies. Identification of any new shared characteristics …

Levels Of Biological Organization And The Origin Of Novelty, Brian Hall, Ryan Kerney

Ryan Kerney

The concept of novelty in evolutionary biology pertains to multiple tiers of biological organization from behavioral and morphological changes to changes at the molecular level. Identifying novel features requires assessments of similarity (homology and homoplasy) of relationships (phylogenetic history) and of shared developmental and genetic pathways or networks. After a brief discussion of how novelty is used in recent literature, we discuss whether the evolutionary approach to homology and homoplasy initially formulated by Lankester in the 19th century informs our understanding of novelty today. We then discuss six examples of morphological features described in the recent literature as novelties, and …