Animal Sciences Commons^™

Landscape Genetics Reveal Broad And Fine‐Scale Population Structure Due To Landscape Features And Climate History In The Northern Leopard Frog (Rana Pipiens) In North Dakota, Justin M. Waraniak, Justin D.L. Fisher, Kevin Purcell, David M. Mushet, Craig A. Stockwell

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Prehistoric climate and landscape features play large roles structuring wildlife populations. The amphibians of the northern Great Plains of North America present an opportunity to investigate how these factors affect colonization, migration, and current population genetic structure. This study used 11 microsatellite loci to genotype 1,230 northern leopard frogs (Rana pipiens) from 41 wetlands (30 samples/wetland) across North Dakota. Genetic structure of the sampled frogs was evaluated using Bayesian and multivariate clustering methods. All analyses produced concordant results, identifying a major east–west split between two R. pipiens population clusters separated by the Missouri River. Substructuring within the two major identified …

An Investigation Of Habitat Suitability Factors And Their Interactions For Predicting Gopher Tortoise Habitat, Abigail V. Lavallin

USF Tampa Graduate Theses and Dissertations

This thesis evaluates the interaction between four habitat factors vital to the gopher tortoise in Florida. Federally and state listed as threatened throughout its entire range, the gopher tortoise is vital to protect, not only for itself individually but its burrows provide an essential habitat to over 300 species making it a key stone species within its environment. Historic habitat modeling methods are reviewed for the gopher tortoise to highlight the gap on this topic. This research expanded on the methods utilized by Baskaran et al. (2006) evaluating the soil, landcover, percentage of canopy cover and the depth to water …

Integrating Multiple Genetic Detection Methods To Estimate Population Density Of Social And Territorial Carnivores, Sean M. Murphy, Ben C. Augustine, Jennifer R. Adams, Lisette P. Waits, John J. Cox

Forestry and Natural Resources Faculty Publications

Spatial capture–recapture models can produce unbiased estimates of population density, but sparse detection data often plague studies of social and territorial carnivores. Integrating multiple types of detection data can improve estimation of the spatial scale parameter (σ), activity center locations, and density. Noninvasive genetic sampling is effective for detecting carnivores, but social structure and territoriality could cause differential detectability among population cohorts for different detection methods. Using three observation models, we evaluated the integration of genetic detection data from noninvasive hair and scat sampling of the social and territorial coyote (Canis latrans). Although precision of estimated density was …

Multi-Element Fingerprinting Of Waters To Evaluate Connectivity Among Depressional Wetlands, Yuxiang Yuan, Xiaoyan Zhu, David M. Mushet, Marinus L. Otte

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Establishing the connectivity among depressional wetlands is important for their proper management, conservation and restoration. In this study, the concentrations of 38 elements in surface water and porewater of depressional wetlands were investigated to determine chemical and hydrological connectivity of three hydrological types: recharge, flow-through, and discharge, in the Prairie Pothole Region of North America. Most element concentrations of porewater varied significantly by wetland hydrologic type (p < 0.05), and increased along a recharge to discharge hydrologic gradient. Significant spatial variation of element concentrations in surface water was observed in discharge wetlands. Generally, higher element concentrations occurred in natural wetlands compared to wetlands with known disturbances (previous drainage and grazing). Electrical conductivity explained 42.3% and 30.5% of the variation of all element concentrations in porewater and surface water. Non-metric multidimensional scaling analysis showed that the similarity decreased from recharge to flowthrough to discharge wetland in each sampling site. Cluster analysis confirmed that element compositions in porewater of interconnected wetlands were more similar to each other than to those of wetlands located farther away. Porewater and surface water in a restored wetland showed similar multi-element characteristics to natural wetlands. In contrast, depressional wetlands connected by seeps along a deactivated drain-tile path and a grazed wetland showed distinctly different multi-element characteristics compared to other wetlands sampled. Our findings confirm that the multi-element fingerprinting method can be useful for assessing hydro-chemical connectivity across the landscape, and indicate that element concentrations are not only affected by land use, but also by hydrological characteristics.

A Time-Delayed Model Of Apis Mellifera, Jun Chen

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Demographics Regarding Belief In Non-Human Animal Sentience And Emotional Empathy With Animals: A Pilot Study Among Attendees Of An Animal Welfare Symposium, Amelia Cornish, Bethany Wilson, David Raubenheimer, Paul Mcgreevy

Societal Attitudes Toward Animals Collection

Attitudes to animals are linked to beliefs about their ability to experience pain and suffering, their cognition, and their sentience. Education and awareness-raising play a pivotal role in increasing society’s consideration of non-human animal welfare. The current pilot study explores the attitudes towards animal welfare among a unique population of people who attended an animal welfare symposium at the University of Sydney. It involved administration of a validated questionnaire that assessed attitudes to animals; specifically exploring participants’ (n = 41) beliefs about the sentience of animals and their emotional empathy with animals. The resultant data revealed significant associations between participants’ …

The Influence Of Habitat Preference On Longitudinal Population Composition And Distribution Of Groupers (Serranidae) In Chumbe Island Coral Park, Zanzibar Tanzania, Caroline Daley

Independent Study Project (ISP) Collection

A survey of six common grouper (Serranidae) species was conducted on both the western protected and eastern unprotected reefs around Chumbe Island. Species, estimated maturity, and fundamental niche and general habitat preference was extrapolated based on observed realized niche and qualified according to substrate, depth, slope position, and general reef region. Abundance, biomass density, and biodiversity of Serranid populations were compared among locations on the reef with habitat preference in mind in order to best assess how habitat influences population composition, distribution, and health. The results of this study provide depth to previous research on the protected reef and indicate …

Andean Condor Nesting And Behavior: A Study Of A Free-Living Pair And Chick As Well As Population Behavior Near Antisana Ecological Reserve, Ecuador, Ian Handler

Independent Study Project (ISP) Collection

The behavior of the Andean condor (Vultur gryphus), especially nest behavior, is little known outside of captivity. More information on chick-parent interactions and parenting dynamics of successful condor pairs is needed in order to help create an effective conservation plan for a species in peril of extinction. Study of nest home used by a free-living pair of condors and home to a five-month old juvenile began on November 11, 2018 and continued through November 29, 2018. The nest is located in Antisanilla Biological Reserve and nearby Antisana Ecological Reserve. The chick was also tagged with numbers and a tracking device …

Large Mammals Of The High Andes A Survey Of Community Composition And Habitat Usage In The Highlands Of Angochagua, Sage Fox

Independent Study Project (ISP) Collection

The large mammal community of the high Andes may be the least understood in South America. It contains multiple threatened and charismatic species including the Andean Bear, Mountain Tapir, Red Brocket Deer, Northern Pudu, and Puma. Many of these species are lacking in distribution and population data. The highlands of the Parroquia de Angochagua were once overgrazed by livestock, but have been mostly restored over the last 20 years through conservation efforts by the local community. These highlands are thought to have populations of all the previously mentioned species, though they had not been surveyed before this study. Transect surveys …

Demography And Behavior Of Critically Endangered Alouatta Coibensis Trabeata Troops In Forest Fragments In And Around Mata Oscura, Veraguas On The Azuero Peninsula Of Panamá, Billy Allen

Independent Study Project (ISP) Collection

The endemic Azuero howler monkey, Alouatta coibensis trabeata, was studied in three sites in and around the Mata Oscura community in Veraguas, Panamá in the western region of the Azuero Peninsula. A. coibensis trabeata is a critically endangered subspecies of A. coibensis that is threatened by continued habitat destruction and human encroachment throughout its entire distribution on the Azuero Peninsula. Sites included the Mata Oscura community (site 1), the Arenas community periphery (site 2), and the Cerro Hoya National Park (site 3). Demography, behavior, and habitat were assessed over 9 days of study in November. Troops were encountered in sites …

Differences In Temporal And Territorial Feeding Patterns Of Various Tropical Trochilidae Species As Observed At Two Different Ecosystems In Soberanía National Park, Delaney Vorwick

Independent Study Project (ISP) Collection

This study aims to illustrate differences in feeding patterns and displays of territorialism at two artificial feeding sites, located in two ecosystems; one site in a secondary forest of Soberanía National Park, the other in a residential area in the nearby town of Gamboa. Four 1-hour observation periods were recorded each day for four days at both sites. During each period of observation, the allocation of time to the three activities of perching, flying, and feeding was recorded, along with the number of visits the feeders. Notes were taken on patterns of territoriality as connected to species and sex. Significance …

Fish Diversity And Distribution In The Seagrass-Coral Reef Continuum At Two Sites Off The Western Coast Of Isla Bastimentos, Bocas Del Toro, Panama, Kathy Liu

Independent Study Project (ISP) Collection

Coral reefs are the most diverse marine ecosystem and the largest biogenic structure on Earth. They serve as shelter for many reef fishes and are a food source for resident and visiting fish species. In the tropics, coral reefs are often in close proximity to seagrass beds and the two contiguous marine habitats are not only highly interconnected but also highly understudied. The seagrass-coral reef continuum offers a wide array of services to human society as well as to various life stages of reef fishes resulting in diel, temporal, or yearly migrations of fish between the two habitats. Tropical reef …

Searching Images And The Meaning Of Alarm Calls, Alan B. Bond

Alan Bond Publications

The snake alarm call of Japanese tits prompts nesting adults to search for and mob the reptile until it is driven away. From playback experiments, Suzuki (2018) has inferred that the call provides an associative cue, evoking a searching image of the salient visual features of the predator—a novel approach to exploring visual attention and vocal communication in the wild.

Looking On The Bright Side Of Livestock Emotions—The Potential Of Their Transmission To Promote Positive Welfare, Luigi Baciadonna, Sandra Duepjan, Elodie Briefer, Mónica Padilla De La Torre, Christian Nawroth

Emotion Collection

Emotions can be defined as an individual’s affective reaction to an external and/or internal event that, in turn, generates a simultaneous cascade of behavioral, physiological, and cognitive changes. Those changes that can be perceived by conspecifics have the potential to also affect other’s emotional states, a process labeled as “emotional contagion.” Especially in the case of gregarious species, such as livestock, emotional contagion can have an impact on the whole group by, for instance, improving group coordination and strengthening social bonds. We noticed that the current trend of research on emotions in livestock, i.e., investigating affective states as a tool …

Welfare-Adjusted Life Years (Waly): A Novel Metric Of Animal Welfare That Combines The Impacts Of Impaired Welfare And Abbreviated Lifespan, Kendy Tzu-Yun Teng, Brecht Devleesschauwer, Charline Maerten De Noordhout, Peter Bennett, Paul Mcgreevy, Po-Yu Chiu, Jenny-Ann L.M.L. Toribio, Navneet Dhand

Assessment of Animal Welfare Collection

Currently, separate measures are used to estimate the impact of animal diseases on mortality and animal welfare. This article introduces a novel metric, the Welfare-Adjusted Life Year (WALY), to estimate disease impact by combining welfare compromise and premature death components. Adapting the Disability-Adjusted Life Year approach used in human health audits, we propose WALY as the sum of a) the years lived with impaired welfare due to a particular cause and b) the years of life lost due to the premature death from the same cause. The years lived with impaired welfare are the product of the average duration of …

Human-Directed Behaviour In Goats Is Not Affected By Short-Term Positive Handling, Jan Langbein, Annika Krause, Christian Nawroth

Social Cognition Collection

In addition to domestication, interactions with humans or task-specific training during ontogeny have been proposed to play a key role in explaining differences in human–animal communication across species. In livestock, even short-term positive interactions with caretakers or other reference persons can influence human–animal interaction at different levels and over different periods of time. In this study, we investigated human-directed behaviour in the ‘unsolvable task’ paradigm in two groups of domestic goats (Capra aegagrus hircus). One group was positively handled and habituated to a plastic box by the experimenter to retrieve a food reward, while the other group only received standard …

Draft Management Plan For The Southern Demersal Gillnet And Demersal Longline Managed Fishery, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

Ecosystem-Based Fisheries Management (Ebfm) Risk Assessment Of The Marine Aquarium Fish Managed Fishery 2014, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

Marine Aquarium Fish Resource Of Western Australia Harvest Strategy : 2018 – 2022 : Version 1.0, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

Work-Type Influences Perceived Livestock Herding Success In Australian Working Kelpies, Jonathan B. Early, Elizabeth R. Arnott, Lisa J. Mascord, Diane Van Rooy, Paul Mcgreevy, Claire M. Wade

Genetics Collection

Background

Working dog handlers and breeders have very different behavioural requirements in the animals that they employ for managing livestock. The Australian Working Kelpie breed may be used in several working contexts, notably yards, paddocks and a combination of both. The working context influences the skillsets required and gives rise to three corresponding work-types: Yard, Paddock and Utility Kelpies. In particular, dogs used for working stock in the confines of yards and trucks interact with stock more forcefully than those mustering in larger areas (paddocks) where they can herd stock effectively from a greater distance. This article explores owner assessments …

An Investigation Of Vocal Learning Propensity In Zebra Finch (Taeniopygia Guttata), Tatsuya Hayashi

Theses and Dissertations

The investigator attempted to predict the vocal learning propensity from either family pedigree or early vocal babbling (subsong). Pedigree trees suggest the possibility that vocal learning ability may depend on family. We failed to predict vocal learning propensity from subsong, but suggested that subsong may influence vocal learning outcome.

Bubble Stream Production By Belugas (Delphinapterus Leucas), Megan Slack

Theses

Bubble stream production in belugas has been poorly characterized and its function is not well understood. I examined behavioral states when producing bubble streams (“bubbling”), and when bubbling calls, to determine whether bubbling was significantly associated with a particular call category or behavioral state. Using 19 hours of video and audio recordings collected over a two-day period, I quantified bubble streams of a 4-month old calf and an unrelated adult female housed together. Based on the overall activity budgets and pool of vocalizations for both animals, I calculated the expected counts of bubble streams with and without vocalizations, assuming that …

Bird Hazard Mitigation Training For General Aviation Pilots - A Prospective Research Study, Flavio A. C. Mendonca, Thomas Q. Carney

Publications

• General aviation industry
• 446,000 aircraft worldwide
• 211,000 in the U.S.
• Supports $219 billion in total economic output and 1.1 million jobs in the U.S
• Flies approximately 25 million flight hours (U.S.)
• Flies to more than 5,000 public airports
• Primary training ground for most commercial airline pilots

Investigation Of Bacterial Taxa As Biomarkers Of Fescue Toxicosis And Heat Stress In Grazing Beef Cows, Sarah Katherine Chewning

Graduate Theses and Dissertations

Fescue toxicosis in grazing beef cattle is caused by consumption of Ergot alkaloids associated with tall fescue (toxic fescue) and is responsible for substantial economic loss to the U.S. beef industry. Cattle consuming toxic fescue suffer adverse physiological responses, such as: hyperthermia, increased respiration rate (RR), poor reproduction and growth performance. Other adverse responses to fescue toxins include the retention of a winter hair coat and vasoconstriction in the extremities, which can lead to tissue necrosis. Identifying cattle with reduced susceptibility to fescue toxins would allow for efficient use of fescue pastures; thus, the objectives of this thesis was to: …

Assessment Of A Nutritional Rehabilitation Model In Two Modern Broilers And Their Jungle Fowl Ancestor: A Model For Better Understanding Childhood Undernutrition, Mikayla Baxter

Graduate Theses and Dissertations

The World Health Organization, estimated that 22.9% of children under the age of 5 are stunted. The etiology of stunting is multifactorial and is associated with poor linear growth, villous atrophy, dysbiosis, and increased intestinal permeability. Inclusion of rye in poultry diets induces nutrient deficiencies and increases intestinal permeability, dysbiosis and decreases growth rates. The objective of this dissertation was to determine if chickens consuming a rye based diet exhibited a similar pathophysiology of stunted children to develop a relevant animal model. Therefore, early or late phase malnutrition was induced determine the effects of malnutrition on performance, bone mineralization, intestinal …

Effects Of Toxic Fescue Exposure On Vaginal Microbial Communities Of Crossbred Beef Cows, Abby Ratton

Animal Science Undergraduate Honors Theses

The consumption of toxic fescue by beef cattle results in several adverse physiological effects such as reduced reproductive success, severe vasoconstriction resulting in hoof sloughing, low body condition scores, hyperthermia, decreased prolactin levels, and reduced hair shedding. The purpose of this study is to characterize bacterial community of the reproductive tract as a potential predictor for toxin exposure. One-hundred fall-calving crossbred cows were allocated to graze Toxic (Toxic: n=50) or Novel (Novel: n= 50) fescue pastures for five months (March-August). Treatments were blocked by sire breed (Charolais or Hereford) and by parity (first, second, third). Animals rotated pastures biweekly and …

Subjective Measures Of Temperament In Beef Heifers Are Reliable Indicators Of Physiological Stress And Indicate Acclimation To Repeated Handling, Jamie T. Parham

Department of Animal Science: Dissertations, Theses, and Student Research

Associations between excitable temperament and many economically relevant traits have been established. In being heritable, temperament can be augmented through selection. Current methods to evaluate temperament in a production setting include numerous subjective and objective measurements, which some producers may find cumbersome to navigate. Those who utilize these methods may not do so efficiently if selection criteria are not indicative of an animal's response to stress, or initial evaluations are not strong indicators of future temperament. The objectives of this research were to develop a procedure for evaluation of calf behavior, indicative of physiological stress, and then determine whether stress …

The Usefulness Of Gps Telemetry To Study Wolf Circadian And Social Activity, Samuel B. Merrill, L. David Mech

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

This study describes circadian and social movement patterns of 9 wolves and illustrates capabilities and limitations of Global Positioning System (GPS) telemetry for analysis of animal activity patterns. Wolves were studied at the Camp Ripley National Guard Training Site in Little Falls, Minnesota, and were captured via helicopter net-gunning. All study wolves showed nocturnal movement patterns regardless of time of year. One wolf's movement pattern switched to diurnal when he conducted an extraterritorial foray from his natal territory. All data sets with GPS intervals <1 hour (n=4) showed crepuscular movement peaks. We identified patterns of den visitation and attendance, estimated minimum distances traveled and minimum rates of movement, and observed that GPS location intervals may affect perceived rates of wolf travel. Global Positioning System telemetry was useful in determining when pack members were traveling together or apart and how long a breeding female wolf spent near her pups (e.g., 0-month-old pups were left unattended by their mother for as long as 17 days).

Goats Prefer Positive Human Emotional Facial Expressions, Christian Nawroth, Natalia Albuquerque, Carine Savalli, Marie-Sophie Single, Alan G. Mcelligott

Social Cognition Collection

Domestication has shaped the physiology and the behaviour of animals to better adapt to human environments. Therefore, human facial expressions may be highly informative for animals domesticated for working closely with people, such as dogs and horses. However, it is not known whether other animals, and particularly those domesticated primarily for production, such as goats, are capable of perceiving human emotional cues. In this study, we investigated whether goats can distinguish human facial expressions when simultaneously shown two images of an unfamiliar human with different emotional valences (positive/ happy or negative/angry). Both images were vertically attached to a wall on …

Use Of On-Farm Emergency Slaughter For Dairy Cows In British Columbia, Katherine E. Koralesky, David Fraser

Slaughter and Slaughtering Practices Collection

On-farm emergency slaughter (OFES), whereby inspection, stunning, and bleeding occur on the farm before the carcass is transported to a slaughterhouse, is permitted in some jurisdictions as a means to avoid inhumane transportation while salvaging meat from injured animals. However, OFES is controversial and its use for dairy cows has been little studied. Inspection documents for 812 dairy cows were examined to identify how OFES was used for dairy cows in British Columbia, Canada, over 16.5 mo. Producers used OFES for dairy cows aged 1 to 13 yr (median of 4 yr). Leg, hip, nerve, spinal, foot, and hind-end injuries …