Animal Sciences Commons^™

Habitat Partitioning And Associated Morphological Differences Among Three Species Of Catostomidae (Teleostei: Actinopterygii) In The South Fork Roanoke River, Virginia, Steven L. Powers, Dakota R. Spruill

Virginia Journal of Science

The upper Roanoke River has 11 species of Catostomidae including Thoburnia rhothoeca, Torrent Sucker; Moxostoma cervinum, Blacktip Jumprock; and Moxostoma ariommum, Bigeye Jumprock. Resource partitioning appears to be a key component of maintaining diverse fish assemblages with habitat and food partitioning cited as especially important in communities containing members of the same family. The diets of these species have been documented in previous work revealing only modest differences among them. Snorkeling observations and subsequent quantification of microhabitat were conducted to illuminate habitat partitioning among these morphologically and ecologically similar species. Thoburnia rhothoeca inhabited the shallowest, fastest water, over the …

Evaluation Of Lake Sturgeon (Acipenser Fulvescens) Spawning Success On An Artificial Reef Constructed In The Kalamazoo River, Michigan, Jason P. Lorenz

Masters Theses

Since lake sturgeon Acipenser fulvescens monitoring began on the Kalamazoo River in 2009, there has been no documentation of survival past the egg stage. Spawning has occurred directly below Calkins Dam and, in 2016, an artificial spawning reef was constructed 275-m downstream to improve habitat and increase survival to the larval stage. The site was monitored with egg mats and larval drift nets to document evidence of successful natural reproduction of lake sturgeon one year prior to construction (2016) and three years post-construction of the artificial reef (2017-2019). Fertilized lake sturgeon eggs were captured all four years of the study …

Fishing For Food: Values And Benefits Associated With Coastal Infrastructure, Cassandra M. Nieman, Alexie N. Rudman, Margaret L. Chory, Grant D. Murray, Luke Fairbanks, Lisa M. Campbell

Faculty Publications

While there is substantial literature about the socio-cultural characteristics and values associated with recreational and commercial fisheries in the U.S., studies directed at those who ‘fish for food’—those who depend on consuming their catch to various degrees—are relatively sparse. Using qualitative data collected through 80 semi-structured interviews with fishers in the summer and fall of 2018 in Carteret County, North Carolina, this study aims to better understand the group of recreational fishers who consume their catch by describing social and cultural dimensions and values associated with fishing for food, examining the role of infrastructure in facilitating access to benefits associated …

Shark Diversity And Relative Abundance At Myrtle Beach, Sc Fishing Piers, Lynsey E. Isner

Honors Theses

Sharks are frequently observed at fishing piers (Barwick et al. 2004; Martin et al. 2019). These piers offer structural habitats for shark prey items, such as smaller fish and invertebrates, which can attract sharks to piers (Barwick et al. 2004; Heupel 2005). Additionally, fishers often clean their catch and discard entrails at the pier, which also may attract sharks (Martin et al. 2019). Moreover, other factors could play a role in attracting sharks to piers. These include water quality parameters, like salinity and temperature, and the physical characteristics of the pier (Ulrich et al. 2007; Castro 1996; Heupel 2005).

Checklist Of The Inland Fishes Of Louisiana, Michael H. Doosey, Henry L. Bart Jr., Kyle R. Piller

Southeastern Fishes Council Proceedings

Since the publication of Freshwater Fishes of Louisiana (Douglas, 1974) and a revised checklist (Douglas and Jordan, 2002), much has changed regarding knowledge of inland fishes in the state. An updated reference on Louisiana’s inland and coastal fishes is long overdue. Inland waters of Louisiana are home to at least 224 species (165 primarily freshwater, 28 primarily marine, and 31 euryhaline or diadromous) in 45 families. This checklist is based on a compilation of fish collections records in Louisiana from 19 data providers in the Fishnet2 network (www.fishnet2.net). The checklist has grown because of descriptions of three new species, new …

Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey

Fisheries Research Articles

Offshore decommissioning activities are expected to increase as oil and gas subsea infrastructure becomes obsolete. Decisions on decommissioning alternatives will benefit from quantifying and understanding the marine communities associated with these structures. As a case study, fish assemblages associated with an inshore network of subsea pipelines located on the North West shelf of Western Australia were compared to those in surrounding natural reef and soft sediment habitats using remotely operated vehicles fitted with a stereo-video system (stereo-ROVs). The number of species, the abundance, biomass, feeding guild composition and the economic value of fishes were compared among habitats. The community composition …

Fish Associations With Shallow Water Subsea Pipelines Compared To Surrounding Reef And Soft Sediment Habitats, Karl D. Schramm, Michael J. Marnane, Travis S. Elsdon, Christopher M. Jones, Benjamin J. Saunders, Stephen J. Newman, Euan S. Harvey

Fisheries Research Articles

Offshore decommissioning activities are expected to increase as oil and gas subsea infrastructure becomes obsolete. Decisions on decommissioning alternatives will benefit from quantifying and understanding the marine communities associated with these structures. As a case study, fish assemblages associated with an inshore network of subsea pipelines located on the North West shelf of Western Australia were compared to those in surrounding natural reef and soft sediment habitats using remotely operated vehicles fitted with a stereo-video system (stereo-ROVs). The number of species, the abundance, biomass, feeding guild composition and the economic value of fishes were compared among habitats. The community composition …

Isolated Reefs Support Stable Fish Communities With High Abundances Of Regionally Fished Species, Matthew J. Birt, Katherine Cure, Shaun Wilson, Stephen J. Newman, Euan S. Harvey, Mark G. Meekan, Conrad W. Speed, Andrew Heyward, Jordan Goetze, James Gilmour

Fisheries Research Articles

Anthropogenic impacts at isolated and inaccessible reefs are often minimal, offering rare opportunities to observe fish assemblages in a relatively undisturbed state. The remote Rowley Shoals are regarded as one of the healthiest reef systems in the Indian Ocean with demonstrated resilience to natural disturbance, no permanent human population nearby, low visitation rates, and large protected areas where fishing prohibitions are enforced. We used baited remote underwater video systems (BRUVS) to quantify fish assemblages and the relative abundance of regionally fished species within the lagoon, on the slope and in the mesophotic habitat at the Rowley Shoals at three times …

Resource Assessment Report Abrolhos Islands And Mid-West Trawl Managed Fishery Resource, Mervi Kangas, A Chandrapavan, Anne Wilkins, E. A. Fisher, S. Evans

WA Marine Stewardship Council report series

This document provides a cumulative description and assessment of the Abrolhos Islands and Mid-West Trawl Managed Fishery (AIMWTMF) and all of the fishing activities (i.e. fisheries / fishing sectors) affecting this resource in Western Australia (WA). This resource comprises of a single species of scallop, Ylistrum balloti which occurs in inshore waters to around 40 m depth at the Abrolhos Islands. This species is captured exclusively by demersal otter trawl gear in the West Coast Bioregion.

Using Acoustic Telemetry To Analyze The Impacts Of Common Carp On Wild Rice Restoration, Franklin Zomer

All NMU Master's Theses

Wild rice (Zizania palustris) is an important cultural, spiritual, and dietary resource to Lake Superior Ojibwe. Common Carp (Cyprinus carpio) are an introduced species that negatively impact aquatic vegetation through changes in water quality, uprooting of plants, and consumption of seed. Acoustic telemetry was used to document Common Carp movements in Waishkey Bay in the upper St. Marys River, MI where wild rice habitat is present. Exclosures were established to measure the influence of carp presence on wild rice seeding success. Common Carp were observed to spend much of their time in Waishkey Bay but also …

Protocol For Monitoring Aquatic Invertebrates Of Small Streams In The Heartland Inventory & Monitoring Network, Version 2.1, David E. Bowles, Michael H. Williams, Hope R. Dodd, Lloyd W. Morrison, Janice A. Hinsey, J. Tyler Cribbs, Gareth A. Rowell, Michael D. Debecker, Jennifer L. Haack-Gaynor, Jeffrey M. Williams

United States National Park Service: Publications

Executive Summary

The Heartland Inventory and Monitoring Network (HTLN) is a component of the National Park Service’s (NPS) strategy to improve park management through greater reliance on scientific information. The purposes of this program are to design and implement long-term ecological monitoring and provide information for park managers to evaluate the integrity of park ecosystems and better understand ecosystem processes. Concerns over declining surface water quality have led to the development of various monitoring approaches to assess stream water quality. Freshwater streams in network parks are threatened by numerous stressors, most of which originate outside park boundaries. Stream condition and …

The Effects Of Temperature And Body Size On The Metabolism And Hypoxia Tolerance Of White Abalone (Haliotis Sorenseni) And Red Abalone (H. Rufescens), Stephanie Fan

Theses

In 2001, white abalone, Haliotis sorenseni, became the first marine invertebrate to be listed under the U.S. Endangered Species Act. Allee effects due primarily to overharvesting and disease resulted in individuals being too far apart for successful fertilization. Despite the fishery closure in 1996, H. sorenseni still shows no signs of recovery. Today, the White Abalone Recovery Consortium (WARC), a group that includes federal and state agencies, aquaculture organizations, academic institutions, and public aquaria, is working to recover this endangered species back from the brink of extinction.

In order to better understand the metabolic demands and hypoxia tolerance of the …

Atlantic Sailfish (Istiophorus Albicans) Distribution Off The East Coast Of Florida From 2003 To 2018 In Response To Sea Surface Temperature, Meredith M. Pratt

Mako: NSU Undergraduate Student Journal

The Atlantic sailfish (Istiophorus albicans) ranges from 40°N to 40°S in the Western Atlantic Ocean and has great economic and recreational value for sport fishers. Off the east coast of Florida, recreational fishing boats often target this species due to its size, speed and strength. This project aimed to determine the relationship between sea surface temperature (SST) and the distribution of Atlantic sailfish caught and released over a fifteen-year period (2003 to 2018). Tagging information was collected from The Billfish Foundation and NOAA who have the most extensive programs for billfish. Using the time and location of each …

Fishing And Rural Livelihood: A Philippine Context, Rosalina Palanca-Tan, Sheila Bongat-Bayog

Economics Department Faculty Publications

The Municipality of Lake Sebu in Mindanao; Philippines offers various opportunities for income-generating fishing activities with its abundant surface water bodies. Lake Sebu is particularly known for good quality tilapia; farmed in fish cages. This study employed primary data collection methods; namely key informant interview; focus group discussion and a comprehensive livelihood household survey to assess the conditions and problems constraining fishing households in Lake Sebu. The study found that fishing-related benefits were mainly derived from aquaculture. Capture fisheries are essentially very small-scale; low gear open fishing done by local fisher folk that generates only subsistence income. Local residents are …

Large-Scale Edna Metabarcoding Survey Reveals Marine Biogeographic Break And Transitions Over Tropical North-Western Australia, Katrina M. West, Michael J. Travers, Michael Stat, Euan S. Harvey, Zoe T. Richards, Joseph D. Dibattista, Stephen J. Newman, Alastair V. Harry, Craig L. Skepper, Matthew Heydenrych, Michael Bunce

Fisheries Research Articles

Environmental DNA (eDNA) metabarcoding has demonstrated its applicability as a highly sensitive biomonitoring tool across small spatial and temporal scales in marine ecosystems. However, it has rarely been tested across large spatial scales or biogeographical barriers. Here, we scale up marine eDNA metabarcoding, test its ability to detect a major marine biogeographic break and evaluate its use as a regional biomonitoring tool in Australia.

Assessment Of Monochloramine Toxicity On Three Small Coastal Organisms, Ashley K. Le

All HCAS Student Capstones, Theses, and Dissertations

Monochloramine ( is a secondary disinfectant used by water treatment facilities to eliminate lingering bacteria in basins, filters, and pipelines. While an effective disinfectant, monochloramine can have negative effects on aquatic organisms. Organis ms affected by the chemical can include species whose environment is near to effluent sites and aquaculture facilities that use tap water lines or has water intake pipes near to effluent sites. Three species commonly found in south Florida that are lik ely exposed to MCA by effluent sites or aquaculture facilities are mosquitofish Gambusia affinis pink shrimp Farfantepenaeus duorarum and the hard clam Mercenaria mercenaria These …

Ontogenetic Variation In Sciaenid Otolith Morphometry With Fish Size From The Northern Gulf Of Mexico, Thomas C. Ingalls

All HCAS Student Capstones, Theses, and Dissertations

Sciaenids are a diverse family of coastal fishes and their fisheries are an important industry in the United States. In the northern Gulf of Mexico this industry is dominated by six species, specifically, red drum (Sciaenops ocellatus), black drum (Pogonias cromis), spotted seatrout (Cynoscion nebulosus), sand seatrout (C. arenarius), Atlantic croaker (Micropogonias undulatus), and spot (Leiostomus xathurus). Sagittal otoliths of all species were evaluated for changes in size and shape in relation to changes in fish total length and age across a variety of seasons and habitats. Evaluation …

Assessing The Toxicity Of A Reconstituted Water Simulating Streams Influenced By Mountaintop Mining In Central Appalachia, Benjamin David Browning

Theses, Dissertations and Capstones

Freshwater ecosystems in Central Appalachia experience increased concentrations of manganese (Mn) and total dissolved solids from the runoff of surface mines and valley fills. Biological communities have been impacted by these surface mining operations and it has been suggested that the increase in total dissolved solids may contribute to these negative effects, but standard laboratory toxicity tests have not found increased concentrations of total dissolved solids to have such negative effects as seen in the field. The elevated total dissolved solids in mining influenced streams may only be toxic in conjunction with another toxicant that is presence in these systems …

An Exceptionally Small New Polycotylid Plesiosaur (Reptilia: Sauropterygia) With Raptorial Eyes From The Western Interior Seaway Of North America, Robert O’Brien Clark

Theses, Dissertations and Capstones

Polycotylidae is a family of plesiosaurian marine reptiles that evolved during the Early Cretaceous and radiated into multiple genera during the Late Cretaceous, achieving a worldwide distribution. Derived polycotylids of the subclade Polycotylinae have a gracile and elongated rostrum, homodont dentition, an extended mandibular symphysis, and foreshortened temporal fenestrae. In this thesis, I describe a small and highly derived new polycotylid taxon based on three specimens from the Campanian of the Western Interior Seaway in North America. A high number of maxillary teeth, fused neural arches, propodials with well-defined facets, and heavily remodeled cortical bone indicate the specimens are adults, …

Comparing The Condition Of Deformed And Non-Deformed Walleyes In Long Lake, Mn, Clayton Beck

Journal of Earth and Life Science

Walleye Sander vitreus is a popular game fish in Minnesota. Walleye’s have become such a popular game fish for anglers that it has led agencies to raise Walleye in rearing ponds. Farm raised fish can show deformities due to environmental, genetic, nutritional, infectious, and toxic factors. Due to this phenomenon, the purpose of this study was to determine if the condition of the Walleye differed between those with and without deformities in Long Lake, MN. Angling was the method of capture during the months of September 2020 through July 2021. There was no evidence to suggest condition differed between non-deformed …

Temporal Invariance Of Social-Ecological Catchments, Mark A. Kaemingk, Christine N. Bender, Chris Chizinski, Aaron J. Bunch, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Natural resources such as waterbodies, public parks, and wildlife refuges attract people from varying distances on the landscape, creating “social-ecological catchments.” Catchments have provided great utility for understanding physical and social relationships within specific disciplines. Yet, catchments are rarely used across disciplines, such as its application to understand complex spatiotemporal dynamics between mobile human users and patchily distributed natural resources. We collected residence ZIP codes from 19,983 angler parties during 2014–2017 to construct seven angler–waterbody catchments in Nebraska, USA. We predicted that sizes of dense (10% utilization distribution) and dispersed (95% utilization distribution) angler–waterbody catchments would change across seasons and …

Roost Use And Movements Of Northern Long-Eared Bats In A Southeast Nebraska Agricultural Landscape, Christopher Fill, Craig R. Allen, John F. Benson, Dirac Twidwell

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Bats are important bio-indicators of ecosystem health and provide a number of ecosystem services. White-nose Syndrome and habitat loss have led to the decline of many bat species in eastern North America, including the federally threatened northern long-eared bat, Myotis septentrionalis. White-nose Syndrome was only recently found in Nebraska, which lies on the western extent of this species geographic range. To better understand how this forest-dependent species persists in an agriculturally dominated landscape amid a growing number of pressures, we investigated the roosting habits of this bat at the Homestead National Monument of America, located in southeast Nebraska. We …

Phylogenomics Reveals Ancient And Contemporary Gene Flow Contributing To The Evolutionary History Of Sea Ducks (Tribe Mergini), Philip Lavretsky, Robert E. Wilson, Sandra L. Talbot, Sarah A. Sonsthagen

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Insight into complex evolutionary histories continues to build through broad comparative phylogenomic and population genomic studies. In particular, there is a need to understand the extent and scale that gene flow contributes to standing genomic diversity and the role introgression has played in evolutionary processes such as hybrid speciation. Here, we investigate the evolutionary history of the Mergini tribe (sea ducks) by coupling multi-species comparisons with phylogenomic analyses of thousands of nuclear ddRAD-seq loci, including Z-sex chromosome and autosomal linked loci, and the mitogenome assayed across all extant sea duck species in North America. All sea duck species are strongly …

Progress On Research Regarding Ecology And Biodiversity Of Coastal Fisheries And Nektonic Species And Their Habitats Within Coastal Landscapes, Mark S. Peterson, Michael J. Andres

Faculty Publications

This paper aims to highlight the new research and significant advances in our understanding of links between coastal habitat quality/quantity/diversity and the diversity of fisheries species and other mobile aquatic species (hereafter nekton) that use them within coastal landscapes. This topic is quite diverse owing to the myriad of habitat types found in coastal marine waters and the va-riety of life history strategies fisheries species and nekton use in these environments. Thus, we focus our mini-review on five selective but relevant topics, habitat templates, essential fish habitat, habitat mosaics/habitat connectivity, transitory/ephemeral habitat, and the emerging/maturing approaches to the study of …

Resolving Variability In Size Structure In An Individual-Based Model For The North Pacific Krill, Euphausia Pacifica, Roxanne Robertson

Cal Poly Humboldt theses and projects

Individual-based models (IBMs) have emerged as a powerful tool for ecological research and are particularly well suited to studies of plankton ecology. In this thesis, I develop an IBM for the North Pacific krill, Euphausia pacifica, with the goal of replicating observed variability in size-structure in the northern California Current Ecosystem. Krill, and E. pacifica in particular, are central to the structure and function of the California Current Ecosystem. Their response to environmental forcing translates climate variability to higher trophic levels and underpins broader ecosystem responses. Recent observations indicate environmental and climate-related shifts in E. pacifica size distributions, which …

Prevalence Of Cymothoidae (Isopoda) Infestation In Bigeye Scad (Selar Crumenophtalmus) From Batangas, Philippines, Tanya Faye S. Muji, Joaquin R. Sorreta, Janice A. Ragaza

Biology Faculty Publications

Cymothoid isopod research is relatively scarce in the Philippines, despite the local economic significance of bigeye scad as an inexpensive source of protein and other nutrients. Isopod parasitism has also been shown to have detrimental effects on their fish hosts. The current study aimed to define the host-parasite relationship between cymothoid isopod and bigeye scad by determining cymothoid isopod prevalence, intensity, and host-parasite length correlations in bigeye scad (Selar crumenophthalmus) hosts sourced from Batangas, Philippines. Fish samples were sampled from the Tagaytay City Market in Cavite, which sources fish directly from Batangas. Fish samples were immediately measured and …

Stress Response Of Largemouth And Smallmouth Bass: Barbless Hooks Versus Barbed Hooks C & R, Wesley Steinmetz, Carson Tembrock

Journal of Earth and Life Science

Largemouth Bass Micropterus salmoides and Smallmouth Bass Micropterus dolomieu are two of the most popular species of fish for anglers to target in Minnesota. In this study, Largemouth Bass and Smallmouth Bass stress was characterized by handling time and recovery time. This study compares handling time and recovery time between barbed and barbless hooks. For Largemouth Bass, there was a significant relationship between recovery time and time out of the water for barbed (P = 0.02, R² = 0.86) and barbless hooks (P < 0.01, R² = 0.74). For Smallmouth Bass, there was no significant relationship between recovery time and time …

Effects Of Salt Runoff On Aquatic Macroinvertebrate Colonies, Kendra Fink

Journal of Earth and Life Science

Aquatic macroinvertebrates bridge the gap in part between primary and secondary consumers, making them ecologically important for most aquatic systems. They are used as biotic indicators for water quality due to their sensitivity to pollutants and may be affected, specifically, by chloride ion concentrations in the water. Water quality can be evaluated by looking at species compositions and their respective tolerance values. To determine long-term effects of road salt on macroinvertebrate colonies, a total of 338 identified macroinvertebrates of 10 families (two generalized to class) at 9 sites were collected from before, after, and between three bridges on Turtle River …

Modelling Climatic And Temporal Influences On Boating Traffic With Relevance To Digital Camera Monitoring Of Recreational Fisheries, Ebenezer Afrifa-Yamoah, Stephen M. Taylor, Ute A. Mueller

Research outputs 2014 to 2021

Digital camera monitoring data on recreational boating traffic are often manually interpreted and the reading cost can be expensive. Typically, these data are used along with other periodic survey information and camera data between these surveys may not be read, creating gaps in the time series. We predicted recreational boating traffic during these ‘gap’ periods using historical camera data and covariates to complete the time series data. Predictive models were built in a Bayesian regression modelling framework to determine the daily distribution of recreational boating traffic at two ramps in Western Australia based on climatic variables (temperature, humidity, wind speed, …

Effects Of Wastewater Effluent On Fish Fin Morphology Of Larval Fathead Minnows (Pimephales Promelas) And Swimming Performance Of Smallmouth Buffalo (Ictiobus Bubalus), Seth Michael Bogue

Masters Theses

The Sangamon River flows across central Illinois and is mostly free flowing except in the city of Decatur where it is impounded to form Lake Decatur. The Sanitary District of Decatur (SDD) is located approximately three miles downstream of the Lake Decatur dam. For a significant portion of the year, the stretch of the Sangamon River downstream of SDD is dominated by effluent due to limited discharge from the Lake Decatur dam. This has resulted in heavy nutrient loading, most notably phosphorus, and elevated levels of nickel and other compounds in the downstream section of the river. Smallmouth buffalo ( …