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2013

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Articles 631 - 660 of 742

Full-Text Articles in Agriculture

Chitosan Coating Improves The Shelf Life And Postharvest Quality Of Table Grape (Vitis Vinifera) Cultivar Shahroudi, Mohammad Ali Shiri, Davood Bakhshi, Mahmood Ghasemnezhad, Monad Dadi, Alexandros Papachatzis, Helen Kalorizou Jan 2013

Chitosan Coating Improves The Shelf Life And Postharvest Quality Of Table Grape (Vitis Vinifera) Cultivar Shahroudi, Mohammad Ali Shiri, Davood Bakhshi, Mahmood Ghasemnezhad, Monad Dadi, Alexandros Papachatzis, Helen Kalorizou

Turkish Journal of Agriculture and Forestry

Table grapes (Vitis vinifera) of the cultivar Shahroudi were coated with 0.5% or 1% chitosan and then stored at 0 °C for 60 days. Shelf-life qualitative traits including rachis and berry appearance and berry cracking, shattering, decay, browning, acceptability, and flavor were evaluated. Treated berries showed less weight loss, decay, browning, shattering, and cracking. Flavor-related factors such as total soluble solids (TSS), titratable acidity (TA), and TSS/TA ratio levels were higher in treated fruits; however, there was no significant difference between the fruits treated with 0.5% and 1% chitosan. Changes of the total phenolics, catechin, and antioxidant capacity of the …

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An Efficient Multiplex Pcr Assay For Early Detection Of Agrobacterium Tumefaciens In Transgenic Plant Materials, Li Yang, Changchun Wang, Lihuan Wang, Changjie Xu, Kunsong Chen Jan 2013

An Efficient Multiplex Pcr Assay For Early Detection Of Agrobacterium Tumefaciens In Transgenic Plant Materials, Li Yang, Changchun Wang, Lihuan Wang, Changjie Xu, Kunsong Chen

Turkish Journal of Agriculture and Forestry

The multiplex polymerase chain reaction (MPCR) is a variant of conventional PCR in which 2 or more target sequences are amplified by more than 1 pair of primers in a single reaction mixture. In this study, an efficient MPCR assay was established and optimized for the quick detection of Agrobacterium-derived plant transformants. The neomycin phosphotransferase II gene fragment (nptII; target gene) and the chromosomal virulence gene ChvA fragment of Agrobacterium tumefaciens (external reference gene) were amplified simultaneously with 2 pairs of corresponding primers. The MPCR results showed that 9 out of 10 kanamycin-resistant lines tested were transformed with the foreign …

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Selection Of Potential Autochthonous Starter Cultures From Shalgam, A Traditional Turkish Lactic Acid-Fermented Beverage, Hasan Tangüler, Hüseyi̇n Erten Jan 2013

Selection Of Potential Autochthonous Starter Cultures From Shalgam, A Traditional Turkish Lactic Acid-Fermented Beverage, Hasan Tangüler, Hüseyi̇n Erten

Turkish Journal of Agriculture and Forestry

The present study was done to select the potential autochthonous lactic acid bacteria (LAB) for the production of shalgam, which is a traditional Turkish lactic acid-fermented beverage. Eighteen LAB belonging to the genera Lactobacillus, Lactococcus, Pediococcus, and Leuconostoc isolated previously from shalgam samples produced in the university laboratory and by small- and large-scale producers in industry were used. Pasteurized black carrot juice was inoculated individually with these selected LAB strains and fermented for 10 days. The strains of Lb. plantarum gave the highest numbers during fermentations with a range of 9.40-9.16 log cfu mL^{-1}. Lb. plantarum^{bx} produced the highest total …

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Support Vector Machines In Wood Identification: The Case Of Three Salix Species From Turkey, Kemal Turhan, Bedri̇ Serdar Jan 2013

Support Vector Machines In Wood Identification: The Case Of Three Salix Species From Turkey, Kemal Turhan, Bedri̇ Serdar

Turkish Journal of Agriculture and Forestry

The aim of this study was to use a support vector machine (SVM) for the first time as a predictive method for differentiating species of Salix wood through the biometric analysis of their anatomy using wood taken from basal disks of 3 species. The purpose of a SVM is to construct optimal decision boundaries among classes in a decision plane. A decision plane separates a set of objects having different class memberships. In this study, the decision plane has 3 different wood species. Timely and accurate identification of tree species can be crucial in forestry. The similarity of structures in …

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Effects Of Winter Green Manuring On Organic Cucumber Production In Unheated Greenhouse Conditions, Yüksel Tüzel, Hale Duyar, Gölgen Bahar Özteki̇n, Özlem Kiliç, Di̇lek Anaç, Ni̇lgün Madanlar, Zeynep Yoldaş Jan 2013

Effects Of Winter Green Manuring On Organic Cucumber Production In Unheated Greenhouse Conditions, Yüksel Tüzel, Hale Duyar, Gölgen Bahar Özteki̇n, Özlem Kiliç, Di̇lek Anaç, Ni̇lgün Madanlar, Zeynep Yoldaş

Turkish Journal of Agriculture and Forestry

The effects of winter green manure crops on organic cucumber production were determined in unheated greenhouse conditions in order to integrate soil building and conservation practices, which are critically important in greenhouse production without crop rotation. The study was conducted between 2006 and 2008 to compare (1) pea (Pisum sativum L.), (2) Italian rye-grass (Lolium multiflorum L.), and (3) common vetch (Vicia sativa L.) as winter green manure plants. These treatments were compared with a control without green manuring (4). All of the plots were divided into halves, and poultry manure was applied as 0 (-PM) and 0.75 kg m^{-2} …

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Interactive Effects Of Seed Size And Drought Stress On Growth And Allocation Of Quercus Brantii Lindl. Seedlings From Two Provenances, Roghayeh Zolfaghari, Payam Fayyaz, Mona Nazari, Fernando Valladares Jan 2013

Interactive Effects Of Seed Size And Drought Stress On Growth And Allocation Of Quercus Brantii Lindl. Seedlings From Two Provenances, Roghayeh Zolfaghari, Payam Fayyaz, Mona Nazari, Fernando Valladares

Turkish Journal of Agriculture and Forestry

Quercus brantii is an important tree species in Zagros forests. Summer drought imposes severe limitations in Q. brantii forests, making reforestation with this species in general very difficult. This is further complicated by the limited ecophysiological information for this species. To improve our understanding of factors affecting the drought tolerance of Q. brantii at early critical life stages, we explored the influence of seed size and provenance on growth and survival of Q. brantii seedlings under drought. As expected, drought reduced growth and survival and increased the root-to-shoot ratio, with larger acorns rendering more vigorous growth than small ones. There …

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Withdrawal Force Capacity Of Mortise And Loose Tenon T-Type Furniture Joints, Mohammad Derikvand, Jerzy Smardzewski, Ghanbar Ebrahimi, Mosayeb Dalvand, Sadegh Maleki Jan 2013

Withdrawal Force Capacity Of Mortise And Loose Tenon T-Type Furniture Joints, Mohammad Derikvand, Jerzy Smardzewski, Ghanbar Ebrahimi, Mosayeb Dalvand, Sadegh Maleki

Turkish Journal of Agriculture and Forestry

The main goal of this study was to determine the effect of wood species and loose tenon length on the withdrawal force capacity of mortise and loose tenon (M<) T-type furniture joints. The specimens were manufactured from oak (Quercus alba), beech (Fagus orientalis L.), poplar (Populus deltoides), sycamore (Platanus orientalis), fir (Abies alba), and white walnut (Juglans cinerea), and the tenon species selected was oriental beech (Fagus orientalis L.). The length of the tenon was determined on the basis of the length glued into the horizontal member of the joint. The lengths in the present study were 10, 20, and …

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The Determination Of Indicator Plant Species For Steppe Rangelands Of Nevşehir Province In Turkey, Sabahaddi̇n Ünal, Zi̇ya Mutlu, Özteki̇n Urla, Bi̇lal Şahi̇n, Ali̇ Koç Jan 2013

The Determination Of Indicator Plant Species For Steppe Rangelands Of Nevşehir Province In Turkey, Sabahaddi̇n Ünal, Zi̇ya Mutlu, Özteki̇n Urla, Bi̇lal Şahi̇n, Ali̇ Koç

Turkish Journal of Agriculture and Forestry

Monitoring and interpretation of the changes to the vegetation of rangelands are key functions for ecological models and sustainable management. Field work was well organized to generally represent the rangelands in the province of Nevşehir, in Central Anatolia, Turkey, in the year 2008. A modified wheel-point method with a loop was used to detect the basal cover of species of vegetation. There were 185 species in 31 sample sites throughout Nevşehir Province. Ordination analysis was performed with the Integrated System for Plant Dynamics software package, which includes detrended correspondence analysis and sample-centered principal components analysis. A gradient analysis showed that …

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Role Of Foliar Feeding Of Micronutrients In Yield Maximization Of Cotton In Punjab, Muhammad Yaseen, Wazir Ahmed, Muhammad Shahbaz Jan 2013

Role Of Foliar Feeding Of Micronutrients In Yield Maximization Of Cotton In Punjab, Muhammad Yaseen, Wazir Ahmed, Muhammad Shahbaz

Turkish Journal of Agriculture and Forestry

Deficiency of micronutrients, particularly of zinc, boron, and iron, in calcareous soils is of great concern. Results indicate a reduction in yield of seed-cotton due to an imbalance of nutrients, particularly micronutrients, on calcareous soils in the last decade. About 90% of Pakistani soils are deficient in micronutrients, particularly zinc, boron, and iron. This paper highlights efforts to overcome these deficiencies in cotton through foliar feeding of micronutrients. The results of this study indicated a marked improvement in seed-cotton yield with foliar application of a spray containing Zn, B, Mn, Cu, and Fe on cotton crops grown on calcareous soils …

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Phytochemical Characteristics Of Grafted Watermelon On Different Bottle Gourds (Lagenaria Siceraria) Collected From Mediterranean Region Of Turkey, Eli̇f Çandir, Hali̇t Yeti̇şi̇r, Fati̇h Karaca, Durmuş Üstün Jan 2013

Phytochemical Characteristics Of Grafted Watermelon On Different Bottle Gourds (Lagenaria Siceraria) Collected From Mediterranean Region Of Turkey, Eli̇f Çandir, Hali̇t Yeti̇şi̇r, Fati̇h Karaca, Durmuş Üstün

Turkish Journal of Agriculture and Forestry

The objective of this study is to determine the sugar, organic acid, and carotenoid content of Crimson Tide watermelons grafted onto bottle gourd genotypes collected from the Mediterranean region of Turkey. The experiment was carried out during the 2008 and 2009 growing season. Grafting on the local bottle gourd rootstocks improved the total soluble solid (TSS), titratable acidity (TA), TSS/TA ratio, sugar, organic acid, and carotenoid (beta-carotene and lycopene) contents of Crimson Tide fruits. Grafting also altered the ratios among the sugars of Crimson Tide watermelon fruits. Among the Crimson Tide/rootstock (CT/rootstock) combinations, the CT/09-01 and CT/07-06 graft combinations with …

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Pcr Detection Of Fusarium Oxysporum F. Sp. Radicis-Lycopersici And Races Of F. Oxysporum F. Sp. Lycopersici Of Tomato In Protected Tomato-Growing Areas Of The Eastern Mediterranean Region Of Turkey, Ayşegül Çolak, Mehmet Bi̇çi̇ci̇ Jan 2013

Pcr Detection Of Fusarium Oxysporum F. Sp. Radicis-Lycopersici And Races Of F. Oxysporum F. Sp. Lycopersici Of Tomato In Protected Tomato-Growing Areas Of The Eastern Mediterranean Region Of Turkey, Ayşegül Çolak, Mehmet Bi̇çi̇ci̇

Turkish Journal of Agriculture and Forestry

Fusarium crown and root rot (caused by Fusarium oxysporum f. sp. radicis-lycopersici, FORL) and Fusarium wilt (caused by Fusarium oxysporum f. sp. lycopersici, FOL) are the most important diseases to affect tomatoes in protected growing conditions in the eastern Mediterranean region of Turkey. These diseases cause significant yield losses in this region. Polymerase chain reaction (PCR) studies were used to characterize 87 isolates from Adana and Mersin provinces, representative of different locations. Among them, 60% and 40% of the plants were determined to have FORL and FOL, respectively. FORL and FOL race 3 are the dominant pathogens in this region. …

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Assessment Of Community Level Physiological Profiles And Molecular Diversity Of Soil Bacteria Under Different Cropping Systems, Biswapriya Das, Kalyan Chakrabarti Jan 2013

Assessment Of Community Level Physiological Profiles And Molecular Diversity Of Soil Bacteria Under Different Cropping Systems, Biswapriya Das, Kalyan Chakrabarti

Turkish Journal of Agriculture and Forestry

Community level physiological profiles (CLPP) and molecular diversity of bacteria in soil under rice–rice (RR), rice-fallow (RF), rice-wheat (RW), legume (LG), mango orchard (MO), and grass land (GL) cropping systems occurring in South West Bengal, India (22^°22'N latitude and 86^°26^'E longitude) were studied. The soils were mostly acidic (pH 5.4 to 6.85). The GL soil recorded the highest organic carbon (20.23 g kg^{-1}) and total nitrogen (1.96 g kg^{-1}). The RF soil was the most acidic and had the poorest nutrient contents. The CLPP, as studied by carbon source utilization in BIOLOG Ecoplates, revealed that the bacteria in soils under …

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Site Index Conversion Equations For Mixed Stands Of Scots Pine (Pinus Sylvestris L.) And Oriental Beech (Fagus Orientalis Lipsky) In The Black Sea Region, Turkey, Aydin Kahri̇man, Hakki Yavuz, İlker Ercanli Jan 2013

Site Index Conversion Equations For Mixed Stands Of Scots Pine (Pinus Sylvestris L.) And Oriental Beech (Fagus Orientalis Lipsky) In The Black Sea Region, Turkey, Aydin Kahri̇man, Hakki Yavuz, İlker Ercanli

Turkish Journal of Agriculture and Forestry

The site index conversion equations are important for estimating the site index of one tree species from the site index of another tree species in mixed stands. In this study, data were obtained from 162 sample plots in mixed stands of Scots pine (Pinus sylvestris L.) and Oriental beech (Fagus orientalis Lipsky) from the Black Sea Region in the north of Turkey. The breast height ages and height of the site trees were measured and the site index was estimated by these data. Geometric linear regression was used to estimate the parameters of a linear model relating to site indices …

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Physicochemical And Rheological Characteristics Of Alcohol Free Probiotic Boza Produced Using Lactobacillus Casei Shirota: Estimation Of Apparent Viscosity Of Boza Using Non-Linear Modeling Techniques, İsmet Öztürk, Safa Karaman, Fati̇h Törnük, Osman Sağdiç Jan 2013

Physicochemical And Rheological Characteristics Of Alcohol Free Probiotic Boza Produced Using Lactobacillus Casei Shirota: Estimation Of Apparent Viscosity Of Boza Using Non-Linear Modeling Techniques, İsmet Öztürk, Safa Karaman, Fati̇h Törnük, Osman Sağdiç

Turkish Journal of Agriculture and Forestry

The effects of fermentation with 2 different starter culture mixtures composed of lactic acid bacteria (LAB) on some physicochemical, microbiological, sensorial, and rheological characteristics of boza, a traditional fermented Turkish beverage, during storage for 10 days at 8 ^°C were investigated. Lb. casei Shirota adapted in boza well and provided the boza with a probiotic property. At the beginning of storage, the Lb. casei Shirota count of boza was 6.83 log cfu mL^{-1}, while total LAB counts were 8.01 and 8.11 log cfu mL-1 for S1 and S2 samples, respectively. A decrease in pH values was observed when the counts …

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Intercepted Rainfall In Abies Fabri Forest With Different-Aged Stands In Southwestern China, Xiangyang Sun, Genxu Wang, Yun Lin, Linan Liu, Yang Gao Jan 2013

Intercepted Rainfall In Abies Fabri Forest With Different-Aged Stands In Southwestern China, Xiangyang Sun, Genxu Wang, Yun Lin, Linan Liu, Yang Gao

Turkish Journal of Agriculture and Forestry

Interception is one of the most important hydrological processes. Most investigations merely focus on canopy interception, but forest floor interception should also be considered. The stand age also influences interception. To explore the interception characteristics of Abies fabri with different stand ages, canopy, stem, and forest floor, interceptions were evaluated during the rainy season of 2009 (from May to October 2009). The total interception rates were found to be 28.8%, 25.5%, and 31.3% for young, middle-aged, and mature forest stands, respectively. Forest floor interception accounted for 19.1%, 18.1%, and 10.0% of the total interception, respectively. We concluded that the differences …

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Effects Of Posttreatment With Alkaline Copper Quat And Copper Azole On The Mechanical Properties Of Wood-Based Composites, Ci̇hat Taşçioğlu Jan 2013

Effects Of Posttreatment With Alkaline Copper Quat And Copper Azole On The Mechanical Properties Of Wood-Based Composites, Ci̇hat Taşçioğlu

Turkish Journal of Agriculture and Forestry

The static bending strengths, modulus of rupture, and modulus of elasticity of 5 commercial wood-based composites [softwood plywood (SWP), hardwood plywood (HWP), medium density fiber-board (MDF), oriented strand board (OSB), and particleboard (PB)] were measured after a postmanufacture treatment of vacuum-impregnation with alkaline copper quat (ACQ) and copper azole (CA) (target retentions: 0.65, 1.30, and 2.60 kg^{ m-3} for ACQ; 0.25, 0.50, and 1.0 kg ^{m-3} for CA). Of the composites tested, SWP exceptionally sustained no damage to its bending strengths, regardless of preservative types and retentions. Others (HWP, MDF, OSB, and PB) were necessarily affected to some degree by …

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The Efficacy Of Crude Aqueous Extracts Of Some Plants As Grain Protectants Against The Stored Grain Mite, Rhizoglyphus Tritici, Muhammad Bashir, Muhammad Dildar Gogi, Muhammad Ashfaq, Dr. Muhammad Afzal, Muhammad Ahsan Khan, Muhammad Ihsan Jan 2013

The Efficacy Of Crude Aqueous Extracts Of Some Plants As Grain Protectants Against The Stored Grain Mite, Rhizoglyphus Tritici, Muhammad Bashir, Muhammad Dildar Gogi, Muhammad Ashfaq, Dr. Muhammad Afzal, Muhammad Ahsan Khan, Muhammad Ihsan

Turkish Journal of Agriculture and Forestry

Mites are one of the most notorious and destructive pests affecting stored grains, contaminating stored grain with toxins and reducing germination rates. Applying synthetic miticides is the sole method for providing knockdown control of mites; however, the continuous application of miticides results in the contamination of grain with highly persistent toxic residues, which pose a health hazard to humans. The present research evaluates the efficacy of crude aqueous extracts of Azadirachta indica, Melia azedarach, Eucalyptus sp., Datura stramonium, and Citrullus colocynthis under laboratory conditions at 5 concentrations (6.25%, 12.5%, 25%, 50%, and 100%) and 4 exposure periods (7, 14, 21, …

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Utilization Of Color Parameters To Estimate Moisture Content And Nutrient Levels Of Peanut Leaves, Muharrem Keski̇n, Sema Karanlik, Serap Görücü Keski̇n, Yurtsever Soysal Jan 2013

Utilization Of Color Parameters To Estimate Moisture Content And Nutrient Levels Of Peanut Leaves, Muharrem Keski̇n, Sema Karanlik, Serap Görücü Keski̇n, Yurtsever Soysal

Turkish Journal of Agriculture and Forestry

Leaf nutrient levels are traditionally quantified by laboratory chemical analysis, which is time-consuming and requires intensive labor and investment. The objective of this study was to predict the moisture content (MC) and nutrient content of peanut leaves from color parameters (CIE Lab) using a chromameter. This method is faster and requires less labor and investment compared to laboratory chemical analysis. Fifty peanut leaf samples were collected from a commercial peanut field. The samples were analyzed for MC, N, P, K, Ca, Mg, Fe, Mn, Zn, and Cu concentrations after color parameters were acquired by chromameter. A positive and high correlation …

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Is Quercus Virgiliana A Distinct Morphological And Genetic Entity Among European White Oaks?, Cristian Mihai Enescu, Alexandru Lucian Curtu, Neculae Şofletea Jan 2013

Is Quercus Virgiliana A Distinct Morphological And Genetic Entity Among European White Oaks?, Cristian Mihai Enescu, Alexandru Lucian Curtu, Neculae Şofletea

Turkish Journal of Agriculture and Forestry

The existence of Quercus virgiliana Ten. is a subject of debate among botanists and silviculturists. It was considered a distinct species, sometimes as an intraspecific taxonomic unit of Q. pubescens L., or was not even recognized as a taxon or infrataxon. This disagreement with regard to the taxonomic classification is explained by the morphological similarities between Q. virgiliana and Q. pubescens, with a small overlap between particular leaf and fruit traits. The main objective of this study was to evaluate the macromorphological fruit and leaf descriptors in Romanian populations of pubescent oaks. We wanted to find which traits discriminate between …

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Yield Gap Analysis—Rationale, Methods And Applications—Introduction To The Special Issue, M.K. Van Ittersum, Kenneth Cassman Jan 2013

Yield Gap Analysis—Rationale, Methods And Applications—Introduction To The Special Issue, M.K. Van Ittersum, Kenneth Cassman

Department of Agronomy and Horticulture: Faculty Publications

Yield gap analysis is an increasingly popular concept. It is a powerful method to reveal and understand the biophysical opportunities to meet the projected increase in demand for agricultural products towards 2050, and to support decision making on research, policies, development and investment that is needed. This Special Issue presents the state-of-the-art about concepts, methods and applications of yield gap analysis. The methodological papers emphasize the need for agronomically sound and relevant analyses, from local to global scales. The fourteen papers provide examples of applications to different crops, climate zones and production conditions, at various spatial extents and with different …

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Distinguishing Between Yield Advances And Yield Plateaus In Historical Crop Production Trends, Patricio Grassini, Kent M. Eskridge, Kenneth Cassman Jan 2013

Distinguishing Between Yield Advances And Yield Plateaus In Historical Crop Production Trends, Patricio Grassini, Kent M. Eskridge, Kenneth Cassman

Department of Agronomy and Horticulture: Faculty Publications

Food security and land required for food production largely depend on rate of yield gain of major cereal crops. Previous projections of food security are often more optimistic than what historical yield trends would support. Many econometric projections of future food production assume compound rates of yield gain, which are not consistent with historical yield trends. Here we provide a framework to characterize past yield trends and show that linear trajectories adequately describe past yield trends, which means the relative rate of gain decreases over time. Furthermore, there is evidence of yield plateaus or abrupt decreases in rate of yield …

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Agricultural Innovation To Protect The Environment, Jeffrey Sayer, Kenneth Cassman Jan 2013

Agricultural Innovation To Protect The Environment, Jeffrey Sayer, Kenneth Cassman

Department of Agronomy and Horticulture: Faculty Publications

In a world of 9.5 billion people, global demand for food, fiber, and biofuels has to be met with minimal possible increases in land, water, fossil fuels, and the minerals used to produce fertilizers (1–4). The problem is debated at three levels: first, that agriculture will not be able to produce enough because it will come up against both biophysical and environmental limits that restrict yields (3, 5, 6); second, that the need to expand and intensify agriculture will destroy the broader environmental values of forests, wetlands, marine systems, and their associated biodiversity (7–9); and third, that there are institutional …

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New Technologies Reduce Greenhouse Gas Emissions From Nitrogenous Fertilizer In China, Wei-Feng Feng, Zheng-Xia Dou, Pan He, Xiao-Tang Ju, David Powlson, Dave Chadwick, David Norse, Yue-Lai Lu, Ying Zhang, Liang Wu, Xin-Ping Chen, Kenneth Cassman, Fu-Suo Zhang Jan 2013

New Technologies Reduce Greenhouse Gas Emissions From Nitrogenous Fertilizer In China, Wei-Feng Feng, Zheng-Xia Dou, Pan He, Xiao-Tang Ju, David Powlson, Dave Chadwick, David Norse, Yue-Lai Lu, Ying Zhang, Liang Wu, Xin-Ping Chen, Kenneth Cassman, Fu-Suo Zhang

Department of Agronomy and Horticulture: Faculty Publications

Synthetic nitrogen (N) fertilizer has played a key role in enhancing food production and keeping half of the world’s population adequately fed. However, decades of N fertilizer overuse in many parts of the world have contributed to soil, water, and air pollution; reducing excessive N losses and emissions is a central environmental challenge in the 21st century. China’s participation is essential to global efforts in reducing N-related greenhouse gas (GHG) emissions because China is the largest producer and consumer of fertilizer N. To evaluate the impact of China’s use of N fertilizer, we quantify the carbon footprint of China’s N …

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The Clubroot Pathogen (Plasmodiophora Brassicae) Influences Auxin Signaling To Regulate Auxin Homeostasis In Arabidopsis, Linda Jahn, Stefanie Mucha, Sabine Bergmann, Cornelia Horn, Paul E. Staswick, Bianka Steffens, Johannes Siemens, Jutta Ludwig-Müller Jan 2013

The Clubroot Pathogen (Plasmodiophora Brassicae) Influences Auxin Signaling To Regulate Auxin Homeostasis In Arabidopsis, Linda Jahn, Stefanie Mucha, Sabine Bergmann, Cornelia Horn, Paul E. Staswick, Bianka Steffens, Johannes Siemens, Jutta Ludwig-Müller

Department of Agronomy and Horticulture: Faculty Publications

The clubroot disease, caused by the obligate biotrophic protist Plasmodiophora brassicae, affects cruciferous crops worldwide. It is characterized by root swellings as symptoms, which are dependent on the alteration of auxin and cytokinin metabolism. Here, we describe that two different classes of auxin receptors, the TIR family and the auxin binding protein 1 (ABP1) in Arabidopsis thaliana are transcriptionally upregulated upon gall formation. Mutations in the TIR family resulted in more susceptible reactions to the root pathogen. As target genes for the different pathways we have investigated the transcriptional regulation of selected transcriptional repressors (Aux/IAA) and transcription …

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Maternal Environment Effects On Phenolic Defenses In Abutilon Theophrasti Seeds, Brian J. Schutte, Sam E. Wortman, John L. Lindquist, Adam S. Davis Jan 2013

Maternal Environment Effects On Phenolic Defenses In Abutilon Theophrasti Seeds, Brian J. Schutte, Sam E. Wortman, John L. Lindquist, Adam S. Davis

Department of Agronomy and Horticulture: Faculty Publications

A class of phenolic compounds, ortho-dihydroxyphenols (hereafter “o-DHP”), has been implicated with seed survival. Based on expectations of the growth-differentiation balance hypothesis, we predicted that seed o-DHP concentration exhibits a curvilinear response to increasing resource availability in the maternal environment, with maximum o-DHP occurring at moderate resource levels. To test this hypothesis, Abutilon theophrasti seeds were produced under field conditions at two locations. Each location included twelve maternal environments established through factorial combinations of soil compost (+/−), species assemblage (A. theophrasti with and without maize), and soil nitrogen fertilizer (0, 0.5× or 1× local …

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Dna Fingerprinting And Anastomosis Grouping Reveal Similar Genetic Diversity In Rhizoctonia Species Infecting Turfgrasses In The Transition Zone Of Usa, B. S. Amaradasa, B. J. Horvath, D. K. Lakshman, S. E. Warnke Jan 2013

Dna Fingerprinting And Anastomosis Grouping Reveal Similar Genetic Diversity In Rhizoctonia Species Infecting Turfgrasses In The Transition Zone Of Usa, B. S. Amaradasa, B. J. Horvath, D. K. Lakshman, S. E. Warnke

Department of Agronomy and Horticulture: Faculty Publications

Rhizoctonia blight is a common and serious disease of many turfgrass species. The most widespread causal agent, Thanatephorus cucumeris (anamorph: R. solani), consists of several genetically different subpopulations. In addition, Waitea circinata varieties zeae, oryzae and circinata (anamorph: Rhizoctonia spp.) also can cause the disease. Accurate identification of the causal pathogen is important for effective management of the disease. It is challenging to distinguish the specific causal pathogen based on disease symptoms or macroscopic and microscopic morphology. Traditional methods such as anastomosis reactions with tester isolates are time consuming and sometimes difficult to interpret. In the present study universally …

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The Plant Science Decadal Vision: Response To The Martin Commentary, David Stern, Sally Ann Mackenzie Jan 2013

The Plant Science Decadal Vision: Response To The Martin Commentary, David Stern, Sally Ann Mackenzie

Department of Agronomy and Horticulture: Faculty Publications

The plant science community is being called upon as never before to carry out research that addresses challenges in food, climate, and health, to educate a populace inundated with science misinformation, and to excite and recruit a new generation of scientists from among that populace, all while investments in basic research are stagnant or even declining in many countries. The Decadal Vision (Plant Science Research Summit, 2013) represents a response from that community, one that launches a meaningful and ongoing dialogue about how best to accomplish these goals. In that spirit, we welcome this thoughtful commentary by Cathie Martin (Martin, …

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Chloroplast Division Protein Arc3 Regulates Chloroplast Ftsz-Ring Assembly And Positioning In Arabidopsis Through Interaction With Ftsz2, Min Zhang, Aaron J. Schmitz, Deena K. Kadirjan-Kalbach, Allan D. Terbush, Katherine W. Osteryoung Jan 2013

Chloroplast Division Protein Arc3 Regulates Chloroplast Ftsz-Ring Assembly And Positioning In Arabidopsis Through Interaction With Ftsz2, Min Zhang, Aaron J. Schmitz, Deena K. Kadirjan-Kalbach, Allan D. Terbush, Katherine W. Osteryoung

Department of Agronomy and Horticulture: Faculty Publications

Chloroplast division is initiated by assembly of a mid-chloroplast FtsZ (Z) ring comprising two cytoskeletal proteins, FtsZ1 and FtsZ2. The division-site regulators ACCUMULATION AND REPLICATION OF CHLOROPLASTS3 (ARC3), MinD1, and MinE1 restrict division to the mid-plastid, but their roles are poorly understood. Using genetic analyses in Arabidopsis thaliana, we show that ARC3 mediates division-site placement by inhibiting Z-ring assembly, and MinD1 and MinE1 function through ARC3. ftsZ1 null mutants exhibited some mid-plastid FtsZ2 rings and constrictions, whereas neither constrictions nor FtsZ1 rings were observed in mutants lacking FtsZ2, suggesting FtsZ2 is the primary determinant of Z-ring assembly in vivo. arc3 …

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Resource Allocation For Maximizing Prediction Accuracy And Genetic Gain Of Genomic Selection In Plant Breeding: A Simulation Experiment, Aaron Lorenz Jan 2013

Resource Allocation For Maximizing Prediction Accuracy And Genetic Gain Of Genomic Selection In Plant Breeding: A Simulation Experiment, Aaron Lorenz

Department of Agronomy and Horticulture: Faculty Publications

Allocating resources between population size and replication affects both genetic gain through phenotypic selection and quantitative trait loci detection power and effect estimation accuracy for marker-assisted selection (MAS). It is well known that because alleles are replicated across individuals in quantitative trait loci mapping and MAS, more resources should be allocated to increasing population size compared with phenotypic selection. Genomic selection is a form of MAS using all marker information simultaneously to predict individual genetic values for complex traits and has widely been found superior to MAS. No studies have explicitly investigated how resource allocation decisions affect success of genomic …

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Evaluation Of Public Sweet Sorghum A-Lines For Use In Hybrid Production, Jeffrey F. Pedersen, Scott E. Sattler, William F. Anderson Jan 2013

Evaluation Of Public Sweet Sorghum A-Lines For Use In Hybrid Production, Jeffrey F. Pedersen, Scott E. Sattler, William F. Anderson

Department of Agronomy and Horticulture: Faculty Publications

A fundamental need for commercialization of sweet sorghum [Sorghum bicolor (L.) Moench] as a bioenergy crop is an adequate seed supply, which will require development of hybrid varieties using dwarf seed-parent lines. A set of six public sweet sorghum A-lines (Dwarf Kansas Sourless, KS9, N36, N38, N39, and N4692) were crossed with a set of six public sweet sorghum cultivars (Brawley, Kansas Collier, Dale, Sugar Drip, Waconia, and Wray). Grain, fiber, and sugar yields were determined, and conversion formulas were applied to estimate ethanol yields. Hybrids were grown in fields at Ithaca, NE, USA, in 1983– 1984 fertilized with …

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