Life Sciences Commons^™

Towards Better Detection And Treatment Of Mycobacterial Disease., Laura O'Connell

ORBioM (Open Research BioSciences Meeting)

Background

Mycobacterial disease is a major cause of fatality, with 1.5 million deaths per 10 million infections annually. Due to the emergence of multi- and extensively-drug resistant clinical isolates, mycobacteriophage (MP) are being investigated as an alternative to antibiotics.

Objectives

The objectives of this study were: to characterise an emerging cohort of MP, to determine suitable in vivo modes of delivery for MP including encapsulation, to examine the application of a MP-based viability assay, and to examine the functionality of MP in raw milk.

Methods

The fast-growing Mycobacterium smegmatis was used as a host in all assays to demonstrate phage …

Population-Level Dna Study Of Stenotrema And Euchemotrema (Gastropoda: Polygyridae: Stenotrematini) Reveals Majority Of Species Are Poorly Circumscribed, Alexander C. Cooper, Elizabeth A. Bergey, Kathryn E. Perez

School of Integrative Biological & Chemical Sciences Faculty Publications

The North American land snail tribe Stenotrematini (Emberton, 1995) is composed of 40 taxa from the genera Stenotrema (Rafinesque, 1819) and Euchemotrema (Archer, 1939). We conducted the first thorough examination of this group since 1948 by sequencing 196 individuals representing 31 of 40 members of the tribe using a combination of cytochrome c oxidase subunit I (COI) and a portion of the 5.8S gene of the large ribosomal subunit (LSU) with the accompanying internal transcribed spacer (ITS-2) region. We reexamined the validity of this tribe by incorporating new sequences with previous DNA work on the …

Butterfly Classification And Species Discovery Using Genomics, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

Genomic sequencing of worldwide butterfly fauna followed by phylogenetic analysis of protein-coding genes informs butterfly classification throughout the taxonomic hierarchy, from families to species. As a rule, we attribute the same taxonomic rank to more prominent clades of comparable divergence (that is, at the same level in the tree). For species delimitation, we use criteria based on relative genetic differentiation and the extent of gene exchange between populations. We analyze the current taxonomic classification of butterflies in the light of genomic phylogenies and encounter clades that correspond to yet unnamed taxa. As a result, 11 tribes, 33 subtribes, 2 genera, …

Cyclocephala Kuijteni (Scarabaeidae: Dynastinae: Cyclocephalini), A New Species From Suriname, Meindert A. Hielkema

Insecta Mundi

Cyclocephala kuijteni, new species (Scarabaeidae: Dynastinae: Cyclocephalini), is described from Suriname. It is illustrated together with its aedeagus, and the characteristics differentiating it from the most similar species C. castanea (Olivier), C. hardyi Endrödi and C. pygidialis Joly are briefly discussed.

The New World genus Cyclocephala Dejean, 1821 contains about 360 described species, with most representatives occurring in the Neotropics (Ratcliffe and Cave 2015). While investigating the scarabaeoid fauna of Suriname with my son Auke, we collected a large number of Cyclocephala specimens with a so-called mothing sheet, including a single male specimen I was unable to identify. The …

Two New Species Of Tulostoma (Agaricales, Basidiomycota) From The Neotropics, Alexandro Lima, Gislaine Melanda, Paulo Marinho, T A, María Paz Martín, Iuri Baseia

Turkish Journal of Botany

Tulostoma catimbauense and T. deltaconcavum, both collected from Neotropical region, in the Vale do Catimbau National Park, Brazil, are proposed as new to science. Detailed macro- and micromorphological descriptions, including scanning electron microscopy of the basidiospores, are provided. ITS nrDNA sequence analyses were used to investigate the phylogenetic position of these taxa in the genus Tulostoma. Discussions about related species were carried out.

A New Scrophularia (Scrophulariaceae) Species Without Staminodes In The Enigmatic ?Canina Clade? From The Western Taurus (Türkiye), Candan Aykurt, Mertcan Gülben, Bariş Özüdoğru, Duygu Sari, İsmai̇l Gökhan Deni̇z, Burçi̇n Çingay

Turkish Journal of Botany

The new species of Scrophularia was discovered among the screes and stony slopes of the Alakır Valley (Antalya) located in the Western Taurus. The most remarkable morphological feature of the species is its flowers without staminodes. With this feature, the species is unique among the representatives of the ?Canina? clade in Türkiye. The new species is closely related to S. floribunda endemic to Türkiye and East Aegean Islands (Greece) according to our phylogenetic analyses based on the nuclear ITS and chloroplast trnL-F regions. Apart from its corollas without staminodes, the new species differs from its morphologically similar …

Newly Recorded Panus Lecomtei (Fr.) Corner (Basidiomycota: Panaceae) For Indonesia, Ivan Permana Putra, Rudy Hermawan, Ali Bin Abithalib Salman

Makara Journal of Science

Panus lecomtei (Polyporales) is reported for the first time from Indonesia at the IPB University Campus Forest (IPBUCF). This species has similar macroscopic features to P. strigellus and P. neostrigosus. This study aimed to confirm the taxonomic position of P. lecomtei found at IPBUCF based on morphological and molecular evidence. The specimens were described by their macroscopic and microscopic characteristics. A phylogenetic approach was used with the internal transcribed spacer 1/2 sequence data. The combination of morphological and molecular analyses confirmed the taxonomic position of our specimens as P. lecomtei. The recorded species was distinguished by gregarious basidiomata, an …

Taxonomic Revision And Phylogenetic Analysis Of The Philadelphicus Group In The Genus Proctacanthus (Insecta: Diptera: Asilidae), And Key To All Proctacanthus North Of Mexico, Teagan Marie Mulford

Theses and Dissertations

Proctacanthus (Macquart 1838), an elegant genus of robber flies within the Asilidae family, plays a significant ecological and economic role. However, the lack of a comprehensive taxonomic treatment hinders their identification and thus their use in evolutionary and behavioral research. This study focuses on the taxonomic revision of the Proctacanthus, identifying the features used in recognizing the philadelphicus Species Group and the rufiventris Species Group. By providing systematic and biological data, describing new species, and offering a key for identification, this research contributes to understanding the ecological significance and geographic distribution and history of Proctacanthus. This work will enhance future …

The Community Ecology Of Ants On The Cumberland Plateau And A Taxonomic Redescription Of The Genus Stenamma Westwood, 1839 (Hymenoptera: Formicidae: Myrmicinae) In A Southeastern Treatment, Zachary Brown

Theses and Dissertations

Grassland communities represent major biodiversity hotspots across the United States. Among these grassland types is the short-leaf pine savanna, a major historical habitat along the Cumberland Plateau. The Cumberland Plateau’s grasslands are under threat due to land use changes such as urbanization and land conversion to pasture and hardwood forests. This study seeks to better understand the community ecology of ants on the Cumberland Plateau using powerlines as a comparison to degraded and historic habitats. Ants have a preference between open sites and forested sites, a separation of 44.5% on a DCA. The Simpson diversity places the short-leaf pine savanna …

The Mealybugs (Hemiptera: Coccoidea: Pseudococcidae) Of Egypt, Gregory A. Evans, S. Abd-Rabou

Insecta Mundi

The Egyptian fauna of mealybugs (Hemiptera: Coccoidea: Pseudococcidae) is reviewed and an illustrated key to the 30 genera and 54 species is provided. Phenacoccus madeirensis Green is reported for the first time in Egypt. A new genus, Ezzatacoccus Evans and Abd-Rabou, is described and illustrated with Amonostherium arabicum Ezzat, 1960 designated as its type species. Octococcus salicicola Priesner and Hosny, 1935 is reinstated as a valid taxon and transferred to Misericoccus Ferris, new combination. Ripersia cressae Hall is transferred to Maconellicoccus Ezzat, new combination and Planococcus lindingeri (Bodenheimer) is transferred back to Formicococcus Takahashi, revised status.

Catalog Of The World Species Of Trichodesma Leconte, 1861 (Coleoptera: Ptinidae) And Associated Genera, Kyle E. Schnepp

Insecta Mundi

A catalog of the species of Trichodesma LeConte (Coleoptera: Ptinidae) for the world is provided, including synonyms and misspellings. Six additional genera, Anobiopsis Fall, Belemia Español, Nanodesma Zahradník, Nicobium LeConte, Trichobiopsis White, and Trichodesmina Español, are also cataloged for com­pleteness. The species name, author, year, and page number of description are given for each species, as well as references for combinations by different authors. The type depository is given when known, and followed by a “?” when unknown but suspected, and a general distribution is given by region of the world followed by country. Authorship of the genus Trichodesma in …

A Synopsis Of The New World Genera Of Phileurini (Coleoptera: Scarabaeidae: Dynastinae), With English And Spanish Keys To The Genera, Brett C. Ratcliffe, Ronald D. Cave

Department of Entomology: Faculty Publications

The 22 genera of New World Phileurini are briefly reviewed and characterized, and English and Spanish keys to all the genera are provided for the first time, thus facilitating generic identifications. Chiliphileurus Endrödi (a junior synonym of the Asian genus Eophileurus Arrow), Moraguesia Dechambre (transferred to Oxyligyrus Arrow in the tribe Pentodontini), and Platyphileurus Ohaus (transferred to the tribe Oryctini) are no longer part of the New World phileurine fauna. The monobasic Phileucourtus Dechambre is considered a junior synonym of Hemiphileurus Kolbe.

Description Of Three New Acanthocinini (Coleoptera: Cerambycidae: Lamiinae) Species From Ecuador, Josef Vlasak, Antonio Santos-Silva

Insecta Mundi

Three new species of Acanthocinini (Coleoptera: Cerambycidae: Lamiinae) are described from Napo province, Ecuador: Anisopodus micromaculatus new species; Parabaryssinus katerinae new species; and Paracleodoxus minutus new species. A key to species of Paracleodoxus Monné and Monné (2010) is provided.

The study of specimens collected by the first author during his stay in Ecuador in 2022 allows us to describe three new species of Acanthocinini (Coleoptera: Cerambycidae). The biodiversity of this relatively small country has been surprising due to the large number of species that were still unknown. Napo province, where the specimens of the new species were …

Two New Genera Of Enopliinae, Skelleyus And Divulgoatus (Coleoptera: Cleridae), Weston Opitz

Insecta Mundi

Two new genera, Skelleyus Opitz and Divulgoatus Opitz (Coleoptera: Cleridae: Enopliinae), show unusual antennal development. Funicular antennomeres become shorter as they approach an extensive ca­pitulum. This study involves three taxa, Skelleyus leavengoodi Opitz, new species, Divulgoatus kelleri Opitz, new species, and Divulgoatus discrepans (Gorham).

The two new genera of Cleridae presented in this work show a most unusual antennal development. The greatly extended antennal capitulum is not found in any other member of the Enopliinae. The complete illustrations of the antennae are depicted in the species descriptions.

A New Species Of Acmaeodera Eschscholtz, 1829 (Coleoptera: Buprestidae) From Southern Nevada, Usa, Richard L. Westcott

Insecta Mundi

A new species of Acmaeodera Eschscholtz, 1829, A. raschkoi Westcott (Coleoptera: Buprestidae), is described from southern Nevada, USA, and compared to four other species in the genus. Its habitat and means of capture are discussed in detail.

A new species of Acmaeodera Eschscholtz, 1829 from Nevada is described herein and figured. Its habitat and means of capture are described. According to Nelson et al. (2008), there were 145 valid species of Acmaeodera in the USA. Since that time, only one more has been added (MacRae 2014), and one has been synonymized (Hansen and Westcott 2023), leaving 146 species of the …

A New Genus And Sixteen New Species Of False Click Beetles (Coleoptera: Eucnemidae) Described From The Heredia Province Of Costa Rica With Several Additional Records From The Osa Peninsula And Panama, Robert L. Otto, Jyrki Muona, Jim Córdoba-Alfaro

Insecta Mundi

More than 1,300 specimens of Eucnemidae collected from Heredia Province in Costa Rica during the 1990s Arthropods of La Selva (ALAS) survey were studied from 2018 through 2022. One new genus of false click beetle, Absensiugum Otto, Muona and Córdoba-Alfaro, is described. Nematodes teres Horn, from the Ne­arctic and Caribbean regions, is transferred to this new genus to form Absensiugum teres, new combination. Sixteen new species of false click beetle (Coleoptera: Eucnemidae) are described from Costa Rica. These new species are: Adelothyreus brevis, Adelothyreus costaricensis, Adelothyreus totus, Quirsfeldia stethonoides, Lacus pectinatus, Maelodrus costaricensis, Onichodon …

A Taxonomic List Of The Old World Genera In The Subfamily Hesperiinae (Hesperiidae) Arranged Into Tribes, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

A taxonomic list of valid genera in the subfamily Hesperiinae from the Old World assigned to tribes is provided. This list is based on phylogenetic analysis of genomic sequence data complemented by morphological considerations. As a result, there are no incertae sedis non-fossil genera in the family Hesperiidae.

Phylogenetics And Integrative Taxonomy Of African Water Snakes (Squamata: Colubridae: Grayia), Teslin Chaney

Open Access Theses & Dissertations

Grayia is a genus of relatively large (1.5 - 2.5 m) aquatic Afrotropical snakes. Recent molecular phylogenies recovered Grayia in its own distinct subfamily (Grayiinae), which was strongly supported as the sister group to Colubrinae. Because tropical African snakes are generally understudied, the relationships within Grayia are poorly known. Due to high degrees of intra- and interspecies variation, identification is often difficult and previous studies involving Grayia included misidentified specimens in other genera. The goal of this study is to create a phylogenetic tree that can be used to understand the relationships and taxonomy of Grayia via an integrative taxonomic …

New Species, Synonymies And Transfers In Neotropical Lamiinae (Coleoptera: Cerambycidae), Larry G. Bezark, Antonio Santos-Silva

Insecta Mundi

Four new species and one new genus of Lamiinae (Coleoptera: Cerambycidae) are described: Nyssodrysilla humeralis new species (Acanthocinini), from Paraguay; Atrypanius schmidi new species (Acan­thocinini), from Paraguay; Chicanatonus hovorei, new genus, new species (Acanthocinini), from Mexico; Euryestola transversa new species (Calliini), from Ecuador. The following new combinations are established: Leiopus convexus Melzer, 1934 is transferred to Hyperplatys Haldeman, 1847; Leiopus floccidus Erichson, 1847 is transferred to Anisopodus White, 1855; Leiopus marcelamonneae Audureau and Demez, 2015 and L. pleuriticus White, 1855 are transferred to Atrypanius Bates, 1864. Leiopus histrionicus Gistel, 1848 is newly synonymized with Eutrypanus dorsalis (Germar, 1823). …

A New Synonym Of Acmaeodera Opacula Leconte, 1858 (Coleoptera: Buprestidae) And Lectotype Designations For Acmaeodera Amabilis Horn, 1878 And, Jason A. Hansen, Richard L. Westcott

Insecta Mundi

Lectotypes are designated for Acmaeodera amabilis Horn, 1878 and Acmaeodera disjuncta Fall, 1899 (Coleoptera: Buprestidae). The defining characters of Acmaeodera opacula LeConte, 1858 are compared with those of A. disjuncta Fall, 1899, as well as habitat and host plant. Acmaeodera disjuncta is synonymized with A. opacula. The distinguishing characters of congeners whose general appearance at times can resemble A. opacula are discussed, and a new state record for Mexico is provided for A. opacula.

Acmaeodera Eschscholtz, 1829 is a large and taxonomically difficult genus. For example, there are over 300 spe­cies known from the United States …

Taxonomic Notes On The Ototretinae, Photurinae, And Psilocladinae (Coleoptera: Lampyridae), Oliver Keller, Kevin R. Hinson

Insecta Mundi

We propose several nomenclatural changes for taxa in the lampyrid subfamilies Ototretinae, Pho­turinae, and Psilocladinae (Coleoptera: Lampyridae). Evidence for the correct year of description of Drilaster albicornis lateobscura (Pic, 1921) is presented. Spellings are corrected for Drilaster debilis holzi (Pic, 1914), Drilaster impustulata fukienensis (Pic, 1955), Drilaster moutoni (Pic, 1911), Drilaster pendleburyi (Pic, 1943) and Pyrogaster lunifera (Eschscholtz, 1822). We also explain the validity of the name Photuris flavicollis Fall, 1927. Fifty-eight taxa described as variations or aberrations in the subfamilies Ototretinae, Photurinae, and Psilocladinae by Delkeskamp (1977), McDermott (1966), Wittmer (1944), and Pic (1924c), are evaluated, with their availability …

Calceolaria Nivalis Subsp. Lanatifolia, A New Subspecies Of Calceolariaceae From Northern Peru, Pamela Puppo

Biological Sciences Faculty Research

A new subspecies of Calceolaria nivalis, C. nivalis subsp. lanatifolia is described and illustrated. The new subspecies was collected in Uchumarca district, department of La Libertad, Peru, between 2300–3850 m elevation. Calceolaria nivalis subsp. lanatifolia is characterized by the lanate indumentum in the lower surface of the leaves, villous petioles, peduncles, and pedicels, and sepals with a strigose margin internally.

Taxonomic Placement And Nomenclatural Revisions For Five Species Of Neotropical Buprestidae (Coleoptera), Norman E. Woodley

Insecta Mundi

Autarcontes lopezi Fisher, 1925 (Coleoptera: Buprestidae), is transferred to the genus Agrilus Curtis, 1825 (new combination). Colobogaster bella Kirsch, 1873, is transferred to the genus Chrysobothris Eschscholtz, 1829 (new combination). Ectinogonia isamarae Moore, 1994, is resurrected as the valid name for the species previously called E. obscuripennis Cobos, 1954, as the latter is unavailable as infrasubspecific. Conognatha jakobsoni Obenberger, 1928, is resurrected over C. germaini Théry in Hoscheck, 1934, as the for­mer name has priority. Callimicra lucida Waterhouse, 1889, is resurrected as the valid name over C. hoscheki Obenberger, 1922, which has been used due to …

Description Of A New Species Of Stenocrates Burmeister (Coleoptera: Scarabaeidae: Dynastinae: Cyclocephalini) From Peru And A Revised Catalog Of The Species Of Stenocrates., Brett C. Ratcliffe, Stephane Le Tirant

Department of Entomology: Faculty Publications

A new species of the South American genus Stenocrates Burmeister, 1847 (Coleoptera: Scarabaeidae: Dynastinae: Cyclocephalini) is described: Stenocrates theryi Ratcliffe & Le Tirant from western Peru. A description, diagnosis, distribution, and illustrations are provided for the new species. A revised catalog of the species of Stenocrates is presented.

A Monographic Revision Of The Jewel Scarabs Genus Chrysina From Panama, Colombia, And Ecuador (Coleoptera: Scarabaeidae: Rutelinae: Rutelini), Manuel D. Barria

Zea E-Books Collection

The work is a taxonomic revision of 28 species of the genus Chrysina Kirby (Scarabaeidae: Rutelinae: Rutelini) found in Panama (25), Colombia (2), and Ecuador (3). Chrysina tricolor (Ohaus), Chrysina chalcothea (Bates), and Chrysina cupreomarginata (F. Bates) are new re­cords for Panama. A new country record from northern Colombia is confirmed for Chrys­ina mercedesae Barria. Chrysina gaitalica Curoe and Hawks and Chrysina galbina Hawks are discovered at new localities in Panama; females of both species are discovered and described. Chrysina aurora (Bates) known from other localities in the west of the country, is rediscov­ered in Veraguas province 147 years after …

The Scarabaeoid Beetles Of Maryland (Coleoptera), Dana L. Price, Brett C. Ratcliffe

Zea E-Books Collection

This research recognizes 267 species of scarabaeoid beetles occurring in Maryland. We provide a brief overview of the geology, climate, and vegetation of the state. Keys to the families within Scarabaeoidea occurring in Maryland are provided. We also offer an introduction for each family, keys to all taxa, species descriptions, distributions, and distribution maps for all species, months that adults are observed, notes on their natural history, illustrations, and a glossary of terms. Maryland’s species are found in eight families: Lucanidae (7), Passalidae (1), Geotrupidae (17), Trogidae (18), Ochodaeidae (1), Hybosoridae (2), Glaphyridae (1), and Scarabaeidae (220).

Published as Bulletin …

Additional Taxonomic Refinements Suggested By Genomic Analysis Of Butterflies, Jing Zhang, Qian Cong, Jinhui Shen, Leina Song, Paul A. Opler, Nick V. Grishin

The Taxonomic Report of the International Lepidoptera Survey

Comparative analyses of genomic data reveal further insights into the phylogeny and taxonomic classification of butterflies presented here. As a result, 2 new subgenera and 2 new species of Hesperiidae are described: Borna Grishin, subgen. n. (type species Godmania borincona Watson, 1937) and Lilla Grishin, subgen. n. (type species Choranthus lilliae Bell, 1931) of Choranthus Scudder, 1872, Cecropterus (Murgaria) markwalkeri Grishin, sp. n. (type locality in Mexico: Sonora), and Hedone yunga Grishin, sp. n. (type locality in Bolivia: Yungas, La Paz). The lectotype is designated for Aethilla toxeus Plötz, 1882. The type locality of Dion uza (Hewitson, 1877) is likely …

Thirteen New Species Of Butterflies (Lepidoptera: Hesperiidae) From Texas, Jing Zhang, Qian Cong, Nick V. Grishin

Insecta Mundi

Analyses of whole genomic shotgun datasets, COI barcodes, morphology, and historical literature suggest that the following 13 butterfly species from the family Hesperiidae (Lepidoptera: Papilionoidea) in Texas, USA are distinct from their closest named relatives and therefore are described as new (type localities are given in parenthesis): Spicauda atelis Grishin, new species (Hidalgo Co., Mission), Urbanus (Urbanus) rickardi Grishin, new species (Hidalgo Co., nr. Madero), Urbanus (Urbanus) oplerorum Grishin, new spe­cies (Hidalgo Co., Mission/Madero), Telegonus tsongae Grishin, new species (Starr Co., Roma), Autochton caballo Grishin, new species (Hidalgo Co., 6 mi W of Hidalgo), Epargyreus fractigutta …

Taxonomic Notes On The Luciolinae (Coleoptera: Lampyridae), Oliver Keller, Lesley Ballantyne

Insecta Mundi

Several nomenclatural changes for taxa in the firefly subfamily Luciolinae (Coleoptera: Lampyri­dae) are proposed. Evidence is presented to correct the year of description for Luciola dregei Motschulsky 1853 to Motschulsky 1854 when the name was ratified. We correct the authorities and years of descriptions for type species designations for the genera Delopleurus Motschulsky, 1853, and Delopyrus Motschulsky, 1853 to Motschulsky 1854 for both. All remaining taxa described as variations in the subfamily Luciolinae by McDermott (1966), are evaluated to subspecies with their availability determined based on ICZN (1999) Article 45.6.

New Species And Taxonomical And Geographical Notes On Cerambycidae And Disteniidae (Coleoptera: Chrysomeloidea), Daniel Heffern, Juan Pablo Botero, Antonio Santos-Silva

Insecta Mundi

Four new species of Coleoptera are described: Pentanodes clavatus new species, from Ecuador; Pentanodes baldwini new species, from Panama (Cerambycidae: Cerambycinae: Tillomorphini); Elytrimita­trix (Grossifemora) dilatata new species, from Mexico (Disteniidae) and Novantinoe falsa new species, from Mexico (Disteniidae). Taxonomical notes on Euderces cribellatus (Bates, 1885) (Tillomorphini) and Oreodera Audinet-Serville, 1835 (Lamiinae: Acrocinini) are provided. Additionally, new records are provided for Oreo­dera noguerai McCarty, 2001 (new state record), Adetus croton Heffern, Santos-Silva and Botero, 2019 (new country record), Icimauna sarauaia Martins and Galileo, 1991 (new country record), and Phoebe mexicana Bates, 1881 (new state record).