Life Sciences Commons^™

Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal

Electronic Theses, Projects, and Dissertations

Studies on population genetics examine the relationship and effects of population structure, migration, gene flow and demographic history, and are therefore important in the conservation of endangered species. Astragalus jaegerianus, a critically federally endangered species found in a geographically restricted range is investigated to determine population structure and genetic variation. Previous research on A. jaegerianus focused on DNA sequence data for cpDNA and nrDNA showed no variation. Further research on A. jaegerianus utilizing AFLP’s on the whole genome indicated substantial gene diversity and population structure consistent with geographically widespread species. AFLP research is a cost-effective process to identify levels …

Global Conservation Status Of Croaker And Drum (Family: Sciaenidae) And Role Of The Maw Trade, Claire E. Gorman

Biological Sciences Theses & Dissertations

Understanding threats and drivers of extinction risk is critical to conserving marine biodiversity. Although marine bony fishes are some of the most diverse and abundant vertebrates in the world, overexploitation is the major threat to these taxa. Species in the family Sciaenidae are important marine resources in many parts of the world, supporting small- and large-scale fisheries for consumption and the international maw (dried swimbladder) trade. Sciaenids exhibit a diverse array of life history characteristics, such as high fecundity, large body size, formation of spawning aggregations, and longevity. Some characteristics increase their susceptibility to anthropogenic stressors. Despite being ecologically and …

Degree Of Conservation Of Methionines Found To Be Oxidized In The Human Urinary Proteome, Alexis Hall

Graduate Theses and Dissertations

In previous work from this laboratory, methionine containing peptides from the human urinary proteome were examined by mass spectrometry for the degree of methionine oxidation to the sulfoxide form. While this demonstrated that many of the methionines detected were capable of being oxidized, the question of whether these methionines are important in the structure and/or function of the parent proteins came about. In some proteins, methionine oxidation has been linked to conformational changes and alteration of function and thus can serve as a mechanism for reversible regulation of activity. It is hypothesized that methionines which might serve a regulatory purpose …

Development And Use Of An Environmental Dna Tool To Monitor Recovery Of The Critically Endangered Smalltooth Sawfish, Pristis Pectinata, In The Northwest Atlantic, Ryan N. Lehman

Master's Theses

The Critically Endangered Smalltooth Sawfish, Pristis pectinata, was once common in the tropical and subtropical waters of the Atlantic Ocean; however, following global declines in range and abundance over the past century, individuals were restricted to the waters of south and southwest Florida (SWFL) by about the 1980’s. Recently, public encounter reports have emerged in historically occupied habitats in United States waters, suggesting individuals are present in, or re-occupying, these areas, although the status of P. pectinata outside of SWFL is not currently well understood. Targeted environmental DNA (eDNA) surveys were chosen to assess the occurrence of P …

A Review On Ecosystem Services And Their Threats In The Conservation Of Nyando Wetland, Kisumu County, Kenya, Joseph K. Maithya, Felix L .M. Ming’Ate, Sammy C. Letema

Tanzania Journal of Science

Wetlands are vital ecosystems as they are essential to human health, wellbeing, ecological integrity and national development as well as in the attainment of the Sustainable Development Goals. However, despite their contributions to human wellbeing, they have been destroyed and degraded over years. The aim of this paper is to review literature on the ecosystem services in Nyando wetland ecosystem and how they have been helpful to the well-being of its residents and also to determine the threats to the Nyando ecosystem services. A total of 88 documents were reviewed out of 20,400 documents from the Google engine search. It …

Suitability Of Native Milkweed (Asclepias) Species Versus Cultivars For Supporting Monarch Butterflies And Bees In Urban Gardens [Research Data], Daniel A. Potter

Entomology Research Data

Public interest in ecological landscaping and gardening is fueling a robust market for native plants. Most plants available to consumers through the horticulture trade are cultivated forms that have been selected for modified flowers or foliage, compactness, or other ornamental characteristics. Depending on their traits, some native plant cultivars seem to support pollinators, specialist insect folivores, and insect-based vertebrate food webs as effectively as native plant species, whereas others do not. There is particular need for information on whether native cultivars can be as effective as true or “wild-type” native species for supporting specialist native insects of conservation concern. Herein …

Spatial And Temporal Dynamics Of Human–Wildlife Conflicts In The Kenya Greater Tsavo Ecosystem, Joseph M. Mukeka, Joseph O. Ogutu, Erustus Kanga, Eivin Røskaft

Human–Wildlife Interactions

Biodiversity conservation in developing countries is faced with many and mounting challenges, including increasing human–wildlife conflicts (HWCs). In Africa and other developing countries, increasing HWCs, particularly those adjacent to protected areas, can adversely affect local stakeholder perceptions and support for conservation. We analyzed HWC reports for multiple wildlife species compiled >23 years (1995–2017) from the Greater Tsavo Ecosystem (GTE) in Kenya to determine HWC trends. The GTE is the largest protected area in Kenya, covering 22,681 km². Overall, 39,022 HWC incidents were reported in 6 GTE regions (i.e., Taveta, Mutomo, Kibwezi, Rombo, Galana, Bachuma). The 5 wildlife species …

Suitability Of Native Milkweed (Asclepias) Species Versus Cultivars For Supporting Monarch Butterflies And Bees In Urban Gardens, Adam M. Baker, Carl T. Redmond, Stephen B. Malcolm, Daniel A. Potter

Entomology Faculty Publications

Public interest in ecological landscaping and gardening is fueling a robust market for native plants. Most plants available to consumers through the horticulture trade are cultivated forms that have been selected for modified flowers or foliage, compactness, or other ornamental characteristics. Depending on their traits, some native plant cultivars seem to support pollinators, specialist insect folivores, and insect-based vertebrate food webs as effectively as native plant species, whereas others do not. There is particular need for information on whether native cultivars can be as effective as true or “wild-type” native species for supporting specialist native insects of conservation concern. Herein …

Seasonal Movements And Habitat Use Of Juvenile Smooth Hammerhead Sharks In The Western North Atlantic Ocean And Significance For Management, Ryan K. Logan, Jeremy Vaudo, Lara L. Sousa, Mark Sampson, Bradley M. Wetherbee, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Articles

Upper trophic level predators dramatically impacted by fisheries include the large-bodied hammerhead sharks, which have become species of conservation concern worldwide. Implementing spatial management for conservation of hammerhead populations requires knowledge of temporal distribution patterns and habitat use, identification of essential habitat for protection, and quantification of interactions with human activities. There is little such information for the smooth hammerhead shark, Sphyrna zygaena. We used fin-mounted satellite tags to examine the movements and habitat use of juvenile smooth hammerheads, a demographic segment particularly threatened by exploitation. Six sharks were tagged off the US mid-Atlantic and tracked for 49–441 days …

Ecology And Evolution, David J. Lohman

Open Educational Resources

Introduction to the basic principles of ecology and evolutionary biology emphasizing quantitative approaches and hypothesis testing. Scientific reasoning, computer literacy, and writing skills are developed in the laboratory.

Limitations On Inferring Shark Vulnerability From Spatial Habitat Protection. Response To Shark Conservation Hindered By Lack Of Habitat Protection, Matias Braccini, Stephen J. Newman

Fisheries Research Articles

Birkmanis et al. (2020a) used occurrence data obtained from commercial fisheries to infer the suitable habitat for eight shark species within the Exclusive Economic Zone (EEZ) of Australia, and quantify the amount of suitable habitat contained within existing no-fishing Marine Protected Areas (MPAs). The authors state that shark conservation is hindered because suitable habitat is mostly unprotected from commercial fishing, therefore increasing the vulnerability of the assessed species. In doing so, the authors imply that shark conservation depends predominantly on establishing MPAs in highly suitable habitats; this, unfortunately, would disregard the broad range of other measures available in the fisheries …

Assessment Of Wild Ring-Tailed Lemur (Lemur Catta) Populations In Southwestern Madagascar With Implications For The Illegal Pet Trade, Samantha D. Calkins

Theses and Dissertations

Accurate population estimates are critical to inform conservation management of species. Incomplete sampling can lead to population underestimates and lacking conservation efforts. Population surveys are important for assessing human and animal welfare to allow for targeted conservation action. Recent ring-tailed lemur (Lemur catta) surveys have led researchers to conclude that L. catta populations are crashing. This has generated much attention and alarm, but may also be based on incomplete information. To better understand population dynamics, more thorough sampling is needed. Here, we survey five such sites to reassess the presence and abundance of L. catta in these locations. …

A Shark Conservationists Toolbox: Current Dna Methods And Techniques Aiding In The Conservation Of Sharks, Arianna N. Nixon

All HCAS Student Capstones, Theses, and Dissertations

Elasmobranchs are important members of their community. Many sharks are important apex predators that help maintain the health of their ecosystem. However, shark populations are globally declining. This is partially due to the fact that sharks are highly targeted for their fins, meat, liver oil, teeth, and skin. However, they are also killed from anthropogenic effects such as habitat destruction and pollution. Most shark species have life history characteristics that also make them more vulnerable to overfishing. Sharks are also difficult to study due to their elusive nature and identification issues. That is why molecular tools are increasingly becoming important …

To Feed Or Not To Feed: Examining The Effects Of Provisioning Tourism On Nurse Sharks In Caye Caulker, Belize, Carlee Jackson

All HCAS Student Capstones, Theses, and Dissertations

Wildlife tourism is increasing in popularity around the world, creating the need to understand alterations in animal behavior and spatial distributions that may occur due to associated anthropogenic disturbances. Nurse sharks (Ginglymostoma cirratum, Bonnaterre 1788) are commonly used for wildlife tourism within the Caye Caulker Marine Reserve in Belize. Shark and Ray Village (SRV) is a site within the reserve where nurse sharks are consistently fed by tour/snorkel boats to create an interactive experience with tourists, termed provisioning tourism. Prior to this experiment, no studies had been conducted in SRV to evaluate the impact of provisioning tourism (tourism …

Mammals Of Cedar Breaks National Monument, S. Nicole Frey, Natalie D'Souza, Ethan Hammer, Bryan Larsen, Jake Nielson

All Current Publications

This document is the result of a study of the terrestrial mammals found at Cedar Breaks National Monument from 2017-2019. During this time, we conducted a survey of mammals using a series of trail cameras. We used survey results to provide an index of terrestrial mammals (excluding bats) within the park. Our goal is to provide a beginner’s guide to the mammals at Cedar Breaks National Monument. We include information regarding appearance, diet, habitat, and population status according to the International Union for the Conservation of Nature (IUCN). The guide represents the species a visitor to Cedar Breaks National Monument …

Impacts Of Tourism On The Ecophysiology Of The Endangered Northern Bahamian Rock Iguana (Cyclura Cychlura), Alison C. Webb

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Increased interest in ecotourism over recent years has led to more direct human-animal interactions and a striking concomitant increase in the provisioning of non-natural food, that may have unintended consequences for the wildlife involved. The critically endangered Northern Bahamian Rock Iguana provides a valuable model to address the potential impact of food provisioning on health as there are populations that represent a graded variation in human presence, with sites experiencing high, low, or no tourism. To assess the potential impacts of tourism on iguana physiology I first reviewed the relevant literature on iguana physiology and then performed three investigations focusing …

Population Status, Threats, And Conservation Of Preuss's Red Colobus (Piliocolobus Preussi) And Other Diurnal Primates In The Ndokbou Forest, Littoral Region, Cameroon, Ruth Bowers-Sword

Masters Theses, 2020-current

The Ebo-Makombe-Ndokbou forest block in southwest Cameroon lies within the Gulf of Guinea biodiversity hotspot, characterized by extremely high levels of species richness and endemism, including those of primates. These forests may contain one of the last populations of the Critically Endangered Preuss’s red colobus monkey (Piliocolobus preussi; PRC), which is found only in southeastern Nigeria and western Cameroon. Gun hunting for bushmeat and habitat loss and degradation from logging and agriculture are the main threats to PRC. The conservation status of PRC and other primates in the Ndokbou forest are largely unknown, with most regional research efforts occurring in …

The Role Of Plasticity In Bumble Bee Responses To Environmental Variability, Matthew Austin

Dissertations

An aim of contemporary biology is elucidating the causes and consequences of phenotypic plasticity. Here, I approach this aim by exploring the eco-evolutionary dynamics of phenotypic plasticity and environmental variability in bumble bees (Apidae: Bombus), a congeneric clade of eusocial pollinating insects. Throughout their evolution, bumble bees have encountered spatiotemporal variability imposed by dynamic floral environments. Today, bumble bees additionally encounter spatiotemporal variability imposed by anthropogenic environmental change. In this dissertation, I explore how phenotypic plasticity affects how successfully bumble bees respond to environmental variability imposed by anthropogenic global change (Chapters 1 and 2) and their floral resources (Chapters …

Western Bumble Bee: Declines In The Continental United States And Range-Wide Information Gaps, Tabitha A. Graves, William M. Janousek, Sarah M. Gaulke, Amy C. Nicholas, Douglas A. Keinath, Christine M. Bell, Syd Cannings, Richard G. Hatfield, Jennifer M. Heron, Jonathan B. Koch, Helen L. Loffland, Leif L. Richardson, Ashley T. Rohde, Jessica Rykken, James P. Strange, Et Al.

Wildland Resources Student Research

In recent decades, many bumble bee species have declined due to changes in habitat, climate, and pressures from pathogens, pesticides, and introduced species. The western bumble bee (Bombus occidentalis), once common throughout western North America, is a species of concern and will be considered for listing by the U.S. Fish and Wildlife Service (USFWS) under the Endangered Species Act (ESA). We attempt to improve alignment of data collection and research with USFWS needs to consider redundancy, resiliency, and representation in the upcoming species status assessment. We reviewed existing data and literature on B. occidentalis, highlighting information gaps …

Potential Effects Of Climate Change On The Geographic Distribution Of The Endangered Plant Species Manihot Walkerae, Gisel Garza, Armida Rivera, Crystian Sadel Venegas Barrera, Jose Guadalupe Martinez-Avalos, Jon Dale, Teresa Patricia Feria-Arroyo

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Walker’s Manihot, Manihot walkerae, is an endangered plant that is endemic to the Tamaulipan thornscrub ecoregion of extreme southern Texas and northeastern Mexico. M. walkerae populations are highly fragmented and are found on both protected public lands and private property. Habitat loss and competition by invasive species are the most detrimental threats for M. walkerae; however, the effect of climate change on M. walkerae’s geographic distribution remains unexplored and could result in further range restrictions. Our objectives are to evaluate the potential effects of climate change on the distribution of M. walkerae and assess the usefulness of natural protected areas …

Vertebrates On The Brink As Indicators Of Biological Annihilation And The Sixth Mass Extinction, Gerardo Ceballos, Paul R. Ehrlich, Peter H. Raven

Harold W. Manter Laboratory of Parasitology: Library Materials

The ongoing sixth mass species extinction is the result of the destruction of component populations leading to eventual extirpation of entire species. Populations and species extinctions have severe implications for society through the degradation of ecosystem services. Here we assess the extinction crisis from a different perspective. We examine 29,400 species of terrestrial vertebrates, and determine which are on the brink of extinction because they have fewer than 1,000 individuals. There are 515 species on the brink (1.7% of the evaluated vertebrates). Around 94% of the populations of 77 mammal and bird species on the brink have been lost in …

Habitat Selection And Host Detection In The Salamander Mussel, Simpsonaias Ambigua, Eric A. Stegmann

Graduate Theses/Dissertations

The native freshwater mussels, Order Unionida, have suffered many species extinctions and loss of abundance. Two important threats to native mussels are loss of habitat and loss of access to the vertebrate hosts of the parasitic mussel larvae. The Salamander mussel, Simpsonaias ambigua, is a habitat specialist, living under flat rocks. It is often found in direct association with its only known host, the common mudpuppy, Necturus maculosus. This association could result from movement and habitat selection by the mussels themselves. Alternatively, it might result from the deposition of juveniles by a resident host. Habitat selection and host …

Characterization Of Microbial Communities Across Disease States And Environmental Conditions In Kemp’S Ridley (Lepidochelys Kempii) And Green Sea Turtles (Chelonia Mydas), Kerry L. Mcnally

Graduate Doctoral Dissertations

All species of sea turtles are threatened or endangered, with various diseases and conditions affecting populations around the world. Understanding healthy populations as well as populations beset by disease conditions, such as fibropapillomatosis and cold-stunning, could lead to helpful tools in the conservation management and medical treatment needed to protect these species. Microbial communities, or the microbiome, at different body sites of sea turtles likely play important roles in the health of these animals, from aiding in digestion to immune system regulation. Disruption of these communities, either through disease and/or environmental factors, may play a role in disease processes and …

The Australian Pastures Genebank, Steve Hughes

IGC Proceedings (1977-2023)

Australian grazing enterprises, including all food and fibre productions, as well as crop rotation, are worth $42 billion per annum to the Australian economy, employing around 693,000 Australian workers. Australia has been a major beneficiary from the introduction and utilization of genetic resources in pasture and forages. Assured access to plant genetic diversity underpins Australia’s ability to maintain agricultural productivity in the face of environmental and economic challenges.

Australia is custodian of potentially the world’s largest and globally significant collection of pasture and forage genetic resources. Much of this is unique and held in state-based collections and represents an invaluable …

The Effects Of Phosphate On Larval Western Barred Tiger Salamanders (Ambystoma Mavortium), Lexy Polivanov, Dennis Ferraro

UCARE: Research Products

This study seeks examine the effects of elevated phosphate levels on the larval stage of the Western Barred Tiger Salamander (Ambystoma mavortium). Hypothesis: Additional phosphate in the water will cause the larval salamanders to have a slower metamorphosis rate than the control group with no additional phosphates. This hypothesis is based off of research that showed that additional nitrogen in the water caused a slower growth rate in the Western Barred Tiger Salamander (Ambystoma mavortium) (Griffis-Kyle, 2007).

The hypothesis was rejected. The dates the larvae morphed alternated between treatment and control. The treatment metamorphosis was not …

Amritmahal: Need For Conserving The Living Pastoral Heritage Of Karnataka, Jahnavi G. Pai, Manohar Patel, Vinay K. Sreeniva

IGC Proceedings (1977-2023)

Karnataka is home to the biodiversity-rich Western Ghats with its range of habitats spanning from scrub forest in the lower elevations to the wet evergreen forests in the higher elevations. In stark visual contrast, the Deccan Plateau is blanketed by arid plains dominated by scrub jungles and dry grasslands. These plains are a melting pot of rich biodiversity, culture and associated traditional knowledge. They have also been important centres for breeding livestock and have supported local livelihoods. In spite of this cultural and ecological importance, these arid plains, especially grasslands with sparse woody vegetation, are increasingly being termed as wastelands. …

The Trichoptera Of Panama Xiv. New Species Of Microcaddisflies (Trichoptera: Hydroptilidae) From Omar Torrijos Herrera National Park, Brian J. Armitage, Steven C. Harris

Insecta Mundi

Abstract. In 2017, a new project was begun to assess the biodiversity of national parks and forest reserves in the Republic of Panama. Designated “Proyecto Sistema de Producción Sostenible Conservación de la Biodiversidad (PSPSCB)”, this project is managed by Panama’s Ministerio de Ambiente. The first park sampled in 2017 was Omar Torrijos Herrera National Park (OTHNP). Trichoptera (Insecta) were collected at four locations using both Malaise traps and UV light traps. The rugged terrain and lack of access in this remote park limited the sampled area. Sampling included streams in both the Caribbean and Pacific drainages. Seven new species of …

Using Expert Knowledge To Develop Management Actions For Tasmanian Lowland Native Grasslands Under Climate Change, Kerry L. Bridle, Louise Gilfedder, Nicholas Macgregor

IGC Proceedings (1977-2023)

Climate change projections for Tasmania suggest that the climate in 2070 will be warmer than present, with increasingly variable seasonal rainfall (Grose et al. 2010). Results from climate change modelling suggest that grassland communities may not exist over their current range in the future (Prober et al. 2012). Lowland temperate natural grasslands have been greatly reduced in areal extent since European settlement in the early 1800s. Two ‘Lowland temperate native grassland’ communities are listed as critically endangered under the Environment Protection and Biodiversity Conservation Act (1999): Themeda triandra grasslands and Poa labillardieri grasslands. Careful landscape planning for current …

Utah's Own Habitat Guidelines For Sage-Grouse, David K. Dahlgren, Michel Kohl, Eric Thacker, S. Nicole Frey, Terry Messmer

All Current Publications

Those living and working within western North America’s sagebrush landscapes have most likely been exposed to sage-grouse issues for many years now and may have felt anxiety concerning the potential impacts that could result from implementing conservation measures designed to help this iconic species persist. Society’s challenge to seek the delicate balance between the conservation of nature and the growth related to human endeavors exemplifies the need to use the best available science as we move forward. Representative information, especially at the landscape level related to sage-grouse, has been hard to come by. However, due to the vast amount of …

Expanding The Known Ranges Of The Phreatic Snails (Mollusca, Gastropoda, Cochliopidae) Of Texas, Usa, Dominique Alvear, Peter H. Diaz, J. Randy Gibson, Benjamin T. Hutchins, Benjamin Schwartz, Kathryn E. Perez

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

The Edwards-Trinity Aquifer System of Texas, USA, one of the world’s most ecologically diverse groundwater systems, contains 14 species (across seven genera) of small, poorly studied freshwater snails. Their underground habitat and microscopic size make them difficult to study and identify. Most published records are from original species descriptions, and some have not been seen since they were described more than 100 years ago. Here we use ~150 new collections, including spring and hyporheic zone sampling from across the Texas portions of the Edwards-Trinity Aquifer System, to update the ranges of these species. Two species were very uncommon, if encountered …