Life Sciences Commons^™

Potential Interactions Between Diatoms And Bacteria Are Shaped By Trace Element Gradients In The Southern Ocean, Alexa R. Sterling, Laura Z. Holland, Randelle M. Bundy, Shannon M. Burns, Kristen N. Buck, P. Dreux Chappell, Bethany D. Jenkins

OES Faculty Publications

The growth of diatoms in the Southern Ocean, especially the region surrounding the West Antarctic Peninsula, is frequently constrained by low dissolved iron and other trace metal concentrations. This challenge may be overcome by mutualisms between diatoms and co-occurring associated bacteria, in which diatoms produce organic carbon as a substrate for bacterial growth, and bacteria produce siderophores, metal-binding ligands that can supply diatoms with metals upon uptake as well as other useful secondary compounds for diatom growth like vitamins. To examine the relationships between diatoms and bacteria in the plankton (diatom) size class (> 3 mu m), we sampled both …

Phytoplankton Thermal Trait Parameterization Alters Community Structure And Biogeochemical Processes In A Modeled Ocean, Stephanie I. Anderson, Clara Fronda, Andrew D. Barton, Sophie Clayton, Tatiana A. Rynearson, Stephanie Dutkiewicz

OES Faculty Publications

Phytoplankton exhibit diverse physiological responses to temperature which influence their fitness in the environment and consequently alter their community structure. Here, we explored the sensitivity of phytoplankton community structure to thermal response parameterization in a modelled marine phytoplankton community. Using published empirical data, we evaluated the maximum thermal growth rates (μ_max) and temperature coefficients (Q₁₀; the rate at which growth scales with temperature) of six key Phytoplankton Functional Types (PFTs): coccolithophores, cyanobacteria, diatoms, diazotrophs, dinoflagellates, and green algae. Following three well-documented methods, PFTs were either assumed to have (1) the same μ_max and …

What Kills The Virtually Immortal Palms Of The Florida Scrub?, Warren G. Abrahamson Ii

Faculty Journal Articles

Premise: Life span varies greatly across plants, with some species being capable of extreme longevity. Yet even long‐lived individuals are susceptible to climatic events, fire, and other challenges. We examined rare mortality events and their causes in two long‐lived palmettos over four decades. Methods: We monitored the survival of the clonal Serenoa repens and non‐clonal, Florida‐endemic Sabal etonia from 1981 to 2022 in four habitats along an elevational gradient within the globally imperiled Florida scrub ecosystem. We considered several challenges to palmetto survival, including extreme fires, shading due to lack of fire, droughts, periods of high precipitation, and possible pathogens. …

Exploring The Evolution Of Trypanosoma Cruzi And The Emergence Of Chagas Disease In The Context Of Environmental Change: Applying The Stockholm Paradigm To Archaeoparasitology, Part I, Aida Romera Barbera, Daniel R. Brooks, T. Michael Fink, Karl J. Reinhard

Karl Reinhard Publications

The Stockholm Paradigm is an evolutionary synthesis that explains the emergence of novel pathogens in the context of environmental disturbances. Considering the urgent climate change situation, anticipation stands as key to prevent and mitigate the effects that climate change can have in the emergence of pathogens. However, the success of preventive measures is hindered by a limited knowledge of the interplaying dynamics between biology, environment, and culture leading to emerging infectious diseases. For many decades, bioarchaeologists have been gathering data on past human-environment interactions, therefore contributing to the conversation. Archaeoparasitology, at the intersection between pathology, bioarchaeology, and biology, is uniquely …

Rapidly Changing Range Limits In A Warming World: Critical Data Limitations And Knowledge Gaps For Advancing Understanding Of Mangrove Range Dynamics In The Southeastern Usa, Rémi Bardou, Michael J. Osland, Steven Scyphers, Christine Shepard, Karen E. Aerni, Jahson B. Alemu I, Robert Crimian, Richard H. Day, Nicholas M. Enwright, Laura C. Feher, Sarah L. Gibbs, Kiera O'Donnell, Savannah H. Swinea, Kalaina Thorne, Sarit Truskey, Anna R. Armitage, Ronald Baker, Josh L. Breithaupt, Kyle C. Cavanaugh, Erik S. Yando, A. Randall Hughes, Et Al.

Biological Sciences Faculty Publications

Climate change is altering species’ range limits and transforming ecosystems. For example, warming temperatures are leading to the range expansion of tropical, cold-sensitive species at the expense of their cold-tolerant counterparts. In some temperate and subtropical coastal wetlands, warming winters are enabling mangrove forest encroachment into salt marsh, which is a major regime shift that has significant ecological and societal ramifications. Here, we synthesized existing data and expert knowledge to assess the distribution of mangroves near rapidly changing range limits in the southeastern USA. We used expert elicitation to identify data limitations and highlight knowledge gaps for advancing understanding of …

Disparate Population And Holobiont Structure Of Pocilloporid Corals Across The Red Sea Gradient Demonstrate Species-Specific Evolutionary Trajectories, Carol Buitrago-López, Anny Cárdenas, Benjamin C.C. Hume, Thierry Gosselin, Fabian Staubach, Manuel Aranda, Daniel J. Barshis, Yvonne Sawall, Christian R. Voolstra

Biological Sciences Faculty Publications

Global habitat degradation heightens the need to better understand patterns of genetic connectivity and diversity of marine biota across geographical ranges to guide conservation efforts. Corals across the Red Sea are subject to pronounced environmental differences, but studies so far suggest that animal populations are largely connected, excepting evidence for a genetic break between the northern-central and southern regions. Here, we investigated population structure and holobiont assemblage of two common pocilloporid corals, Pocillopora verrucosa and Stylophora pistillata, across the Red Sea. We found little evidence for population differentiation in P. verrucosa, except for the southernmost site. Conversely, S. …

Otoliths Through Time: A Multidecadal Characterization Of Fish Otoliths In A Changing Climate, Jordan M. Waldron

UNF Graduate Theses and Dissertations

There is a lack of research describing how widespread environmental changes in marine ecosystems affect wild adult teleost otoliths, limiting our ability to understand the impacts that alterations to otoliths can have on fish physiology and ecology. In this study, morphological and microstructural changes in wild adult fish otoliths were traced over 3 decades among species common in Tampa Bay, Florida – red drum Sciaenops ocellatus and common snook Centropomus undecimalis. Optical microscopy and scanning electron microscopy were used to characterize otolith morphology and microstructure, respectively, to then pair with fluctuations in environmental variables – water temperature, pH, dissolved …

A Biophysical Approach To Modeling Elevational Range Shifts In Colorado Mammal Communities, Ryan T. Mahar

Graduate Student Theses, Dissertations, & Professional Papers

Species geographic ranges are shifting in the face of contemporary climate warming, and documenting range shifts is crucial to our understanding of the underlying drivers mediating movement in geographic range limits. Studies on elevational range shifts with climate change are beginning to accrue within the literature, though observed shifts are idiosyncratic and difficult to predict. Some species may respond to warming temperatures by shifting their range limits upslope, where temperatures are cooler owing to the adiabatic lapse rate. However, species may also respond to warming temperatures in an elevation-dependent manner: if changes in snow depth expose overwintering organisms to colder …

Impacts Of Climate And Wildfire On Western Larch Regeneration, Spencer T. Vieira

Graduate Student Theses, Dissertations, & Professional Papers

Fire plays a critical role in forests of the western United States (US), but as wildfire and climate deviate from historical patterns, increasing fire activity may significantly alter forest ecosystems. To understand the impacts of changing climate and wildfire activity on conifer forests, we studied the impact of wildfire and annual post-fire climate on western larch (Larix occidentalis) regeneration. We destructively sampled 1651 seedlings from 57 sites within 32 fires that burned at moderate or high severity from 2000-2015 in the northwestern US. Using dendrochronological methods, we estimated germination years of seedlings to calculate annual recruitment rates. We …

Individual And Population Responses To Hydrologic Variability In A Headwater Stream Salamander, Madaline Cochrane

Graduate Student Theses, Dissertations, & Professional Papers

Understanding how organisms respond to environmental variability is a central goal in ecology – a goal made even more pressing by the herculean challenge global climate change presents to all organisms. Climate change is increasing the frequency and intensity of floods and droughts, which will likely have disproportionate effects on freshwater organisms. Many stream-associated species have multi-stage life histories. However, we lack an empirical understanding of life history and movement responses of these organisms to hydrologic disturbances, and how these responses may influence demographic rates. In my dissertation, I used a combination of growth, developmental, movement, and demographic data to …

How Aquatic Insects Mitigate Temperature-Oxygen Challenges Via Behavioral, Morphological, And Physiological Plasticity, Jackson H. Birrell

Graduate Student Theses, Dissertations, & Professional Papers

How do organisms respond to environmental challenges and to environmental change? These questions occupy a central place in ecology and answering them will help us to understand why species live where they do, how organisms are affected by human activities, and, ultimately, how to choose among alternative conservation strategies. These questions are difficult, however, for two reasons. First, environmental challenges often involve multiple, interacting stressors. Second, individual responses can be modified by behavioral, morphological, and physiological plasticity. My dissertation investigates how interactions between temperature and oxygen influence the performance and survival of aquatic insects and how plasticity allows individuals to …

The Role Of Interspecific Competition In The Range Collapse Of A Songbird After Rapid Range Expansion, Zachary H. Vickers

Graduate Theses/Dissertations

There is a wealth of evidence demonstrating interspecific competition in birds, but often this evidence is localized and may or may not entirely explain range dynamics over large geographic extents. Bewick’s Wrens (Thrymanes bewickii) and House Wrens (Troglodytes aedon) are small passerine birds of the family Troglodytidae. Previous experimental evidence has demonstrated that Bewick’s Wrens suffer from asymmetric interference competition from House Wrens in Kansas, and this evidence has been cited as the likely reason for the historically recent range collapse of the Bewick’s Wren. However, I argue that localized experimental evidence is insufficient to explain abundance trends over large …

Natural Variation In Temperature-Modulated Immunity To Pseudomonas Syringae Pv. Tomato (Pst Dc3000) In Arabidopsis Thaliana Plants, Christina A. M. Rossi

Theses and Dissertations (Comprehensive)

Studies conducted on the model plant-pathogen system Arabidopsis thaliana-Pseudomonas syringae pv. tomato (Pst) showed that elevated temperature suppresses the pathogen-induced production of salicylic acid (SA), which is a key plant defence hormone. This increased host vulnerability at higher temperatures is due to downregulated expression of CALMODULIN BINDING PROTEIN 60-LIKE G (CBP60g) and SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1), which encode master regulators of SA production. Collectively, these previous studies only focused on one natural accession of Arabidopsis called Columbia-0 (Col-0). However, the intraspecific variation in Arabidopsis immunity phenotypes under elevated temperature remains unknown. To fill this critical knowledge gap, my …

High Winds And Melting Sea Ice Trigger Landward Movement In A Polar Bear Population Of Concern, Annie Kellner, Todd C. Atwood, David C. Douglas, Stewart W. Breck, Colorado State University - Fort Collins

United States Department of Agriculture Wildlife Services: Staff Publications

Some animal species are responding to climate change by altering the timing of events like mating and migration. Such behavioral plasticity can be adaptive, but it is not always. Polar bears (Ursus maritimus) from the southern Beaufort Sea subpopulation have mostly remained on ice year-round, but as the climate warms and summer sea ice declines, a growing proportion of the subpopulation is summering ashore. The triggers of this novel behavior are not well understood. Our study uses a parametric time-to-event model to test whether biological and/or time-varying environmental variables thought to influence polar bear movement and habitat selection …

Decline Of Seagrass (Posidonia Oceanica) Production Over Two Decades In The Face Of Warming Of The Eastern Mediterranean Sea, Victoria Litsi-Mizan, Pavlos T. Efthymiadis, Vasilis Gerakaris, Oscar Serrano, Manolis Tsapakis, Eugenia T. Apostolaki

Research outputs 2022 to 2026

* The response of Posidonia oceanica meadows to global warming of the Eastern Mediterranean Sea, where the increase in sea surface temperature (SST) is particularly severe, is poorly investigated. * Here, we reconstructed the long-term P. oceanica production in 60 meadows along the Greek Seas over two decades (1997–2018), using lepidochronology. We determined the effect of warming on production by reconstructing the annual and maximum (i.e. August) SST, considering the role of other production drivers related to water quality (i.e. Chla, suspended particulate matter, Secchi depth). * Grand mean (±SE) production across all sites and the study period was 48 …

Quantifying Life History Energetics Of An Oviparous Elasmobranch Subject To Future Warming Water, Carolyn R. Wheeler

Graduate Doctoral Dissertations

Marine ectothermic fishes – fishes that do not regulate internal body temperature independent from the water temperature – are some of the most vulnerable organisms to rapid and alarming increases in environmental temperature occurring due to climate change mediated-ocean warming. For tropical fish species that live near their thermal maxima, this warming could be of grave consequence to individuals, populations, and whole marine ecosystems. Certain key life stages such as embryos and reproducing adults may be particularly vulnerable to warming given the excess energetic costs of these life stages, which may disallow compensation for extreme changes in temperature. One taxonomic …

Impacts Of Climate Change On Small Pelagic Fish Catches In The Coastal Artisanal Fishers Communities Of Tanzania, Lyidia Kapapa, Paul Onyango Onyango, Nibedita Mukherjee, Prosper Mfilinge

Tanzania Journal of Science

Climate-related effects occur across all regions in Tanzania, affecting primary sectors such as agriculture and fishing. This study investigated the impacts of climatic change on small pelagic catches in fishers in Kilindoni, Kipumbwi and Kilwa Kivinje villages along the Tanzanian coast. We studied how changes in rainfall, sea surface temperature, wind speed and chlorophyll a affect small pelagic fisheries using primary and secondary data. Qualitative and quantitative methods were applied. Primary data collection involved questionnaires, focus group discussions and key informant interviews. Secondary data was obtained from Tanzania Meteorological Agency and remote sensing from Modi's sensor. Results showed an increase …

Modeling Plant Migration In A Varying Landscape, Seth Corbridge

Fall Student Research Symposium 2022

It is important to predict how plants will migrate under the changing conditions associated with climate change. In particular, finding instances where plants migrate quickly will help in predicting which plant species are in danger of being outpaced by climate change. Many existing models for plant migration assume a homogeneous landscape, however this is not always fully realistic. This project considers a model incorporating landscape heterogeneity for modeling plant migration. By forming a landscape of varying patches of high and low motilities, it is shown how a varying landscape can lead to increased migration rates in some cases when compared …

Atlantic Surfclam (Spisula Solidissima) Population Demographics And Distribution Along The Middle Atlantic Bight, Mauricio González Díaz

OES Theses and Dissertations

The Atlantic surfclam (Spisula solidissima) is a long-lived benthic biomass dominant organism that occurs on the Middle Atlantic Bight (MAB) continental shelf between 10 m and 50 m. Trends in Atlantic surfclam population specific growth and mortality rates were analyzed using four decades of age and length observations obtained from NOAA stock surveys from the 1980s to 2010s in six regions distributed along the MAB. Atlantic surfclam specific growth rates and asymptotic lengths were estimated from the age and length observations using the von Bertalanffy growth model. The analysis showed that the Atlantic surfclam median asymptotic length in …

Landscape Genomics Of The Tussock Cottongrass (Eriophorum Vaginatum) And The Dwarf Birch (Betula Nana) In North Central Alaska, Elizabeth Stunz

Open Access Theses & Dissertations

Global climate change has resulted in geographic range shifts of flora and fauna at a global scale. Extreme environments, like the Arctic, are seeing some of the most pronounced changes. This region covers 14% of the Earthâ??s land area, and while many arctic species are widespread, understanding ecotypic variation at the genomic level will be important for elucidating how range shifts will affect ecological processes. Increase in shrub cover is a major effect of ongoing climate change in arctic tundra ecosystems. The relative increases in abundance and cover of shrub species such as birch, willow, and alder (Betula, Salix, and …

How Will Climate Change Affect The Future, Ashanti K. Belone, Farrukh Zia

Publications and Research

Climate Change has played a massive role in the habitat of us earth dwellers and the animals that co-exists with us. I believe that essentially climate change plays a massive role because this can dictate whether or not the earth is habitable and if a need for evacuation is necessary. Many might believe that climate change only refers to the rising temperature but that’s just the icing on the cake. Earth is a system that is very much connected, this means that changes in one area will set off a chain reaction allowing these changes to happen in many other …

Editorial: Tropicalization In Seagrasses: Shifts In Ecosystem Function, Glenn A. Hyndes, Jessie C. Jarvis, Kenneth L. Heck

Research outputs 2022 to 2026

Seagrass meadows form highly productive and diverse ecosystems that provide a range of ecosystem services along coasts of most continents (Barbier et al., 2011; Nordlund et al., 2016), yet they continue to experience large losses through direct and indirect human disturbances (Waycott et al., 2009; Duarte et al., 2018). Like other coastal ecosystems, including coral reefs and kelp forests, seagrasses are showing strong negative responses to elevated ocean temperatures and heatwaves, in which rising temperatures exceed their thresholds for survival [...].

Bison Movements Change With Weather: Implications For Their Continued Conservation In The Anthropocene, Nicholas A. Mcmillan, Samuel D. Fuhlendorf, Barney Luttbeg, Laura E. Goodman, Craig A. Davis, Brady W. Allred, Robert G. Hamilton

Department of Agronomy and Horticulture: Faculty Publications

Animal movement patterns are affected by complex interactions between biotic and abiotic landscape conditions, and these patterns are being altered by weather variability associated with a changing climate. Some animals, like the American plains bison (Bison bison L.; hereafter, plains bison), are considered keystone species, thus their response to weather variability may alter ecosystem structure and biodiversity patterns. Many movement studies of plains bison and other ungulates have focused on point-pattern analyses (e.g., resource-selection) that have provided information about where these animals move, but information about when or why these animals move is limited. For example, information surrounding the …

I-Climate: A “Clinical Climate Informatics” Action Framework To Reduce Environmental Pollution From Healthcare, Hardeep Singh

Faculty, Staff and Student Publications

Addressing environmental pollution and climate change is one of the biggest sociotechnical challenges of our time. While information technology has led to improvements in healthcare, it has also contributed to increased energy usage, destructive natural resource extraction, piles of e-waste, and increased greenhouse gases. We introduce a framework "Information technology-enabled Clinical cLimate InforMAtics acTions for the Environment" (i-CLIMATE) to illustrate how clinical informatics can help reduce healthcare's environmental pollution and climate-related impacts using 5 actionable components: (1) create a circular economy for health IT, (2) reduce energy consumption through smarter use of health IT, (3) support more environmentally friendly decision-making …

The Stockholm Paradigm: Lessons For The Emerging Infectious Disease Crisis, Daniel R. Brooks, Walter A. Boeger, Eric P. Hoberg

MANTER: Journal of Parasite Biodiversity

The emerging infectious disease (EID) crisis represents an immediate existential threat to modern humanity. Current policies aimed at coping with the EID crisis are ineffective and unsustainably expensive. They have failed because they are based on a scientific paradigm that produced the parasite paradox. The Stockholm paradigm (SP) resolves the paradox by integrating four elements of evolutionary biology: ecological fitting, sloppy fitness space, coevolution, and responses to environmental perturbations. It explains why and how the EID crisis occurs and is expanding and what happens after an EID emerges that sets the stage for future EIDs. The SP provides a number …

Striving To Be Resilient: The Role Of Crop-Poultry Integrated System As A Climate Change Adaptation Strategy In Semiarid Eastern Kenya, Kelvin Mulungu, Daniel Kangogo

All Peer-Reviewed Publications

Climate change continues to pose significant challenges to food security and livelihoods of smallholder farmers specifically in semi-arid regions. One approach that holds prospects for climate risk management is climate-smart agriculture (CSA). CSA has concentrated on crop practices with little attention to livestock especially indigenous (village) chickens as a potential practice that can be combined with crop agriculture. This study considers the adoption of three CSA practices: improved maize seeds (IS), soil management (SM), indigenous chicken (IC) enterprise and their various combinations. Using survey data collected from 300 farming households in semiarid Kenya, we estimate the impact of integrated crop-poultry …

Disturbances In North American Boreal Forest And Arctic Tundra: Impacts, Interactions, And Responses, Adrianna C. Foster, Jonathan A. Wang, Gerald V. Frost, Scott J. Davidson, Elizabeth Hoy, Kevin W. Turner, Oliver Sonnentag, Howard Epstein, Logan T. Berner, Amanda H. Armstrong, Mary Kang, Brendan M. Rogers, Elizabeth Campbell, Kimberley R. Miner, Kathleen M. Orndahl, Laura Bourgeau-Chavez, David A. Lutz, Nancy H. F. French, Dong Chen, Jinyang Du, Tatiana A. Shestakova, Jacquelyn K. Shuman, Ken Tape, Anna Maria Virkkala, Christopher Potter, Scott Goetz

Michigan Tech Publications, Part 1

Ecosystems in the North American Arctic-Boreal Zone (ABZ) experience a diverse set of disturbances associated with wildfire, permafrost dynamics, geomorphic processes, insect outbreaks and pathogens, extreme weather events, and human activity. Climate warming in the ABZ is occurring at over twice the rate of the global average, and as a result the extent, frequency, and severity of these disturbances are increasing rapidly. Disturbances in the ABZ span a wide gradient of spatiotemporal scales and have varying impacts on ecosystem properties and function. However, many ABZ disturbances are relatively understudied and have different sensitivities to climate and trajectories of recovery, resulting …

Fresh Air For The Mire-Breathing Hypothesis: Sphagnum Moss And Peat Structure Regulate The Response Of Co2 Exchange To Altered Hydrology In A Northern Peatland Ecosystem, Ally O’Neill, Colin Tucker, Evan S. Kane

Michigan Tech Publications, Part 1

Sphagnum-dominated peatlands store more carbon than all of Earth’s forests, playing a large role in the balance of carbon dioxide. However, these carbon sinks face an uncertain future as the changing climate is likely to cause water stress, potentially reducing Sphagnum productivity and transitioning peatlands to carbon sources. A mesocosm experiment was performed on thirty-two peat cores collected from two peatland landforms: elevated mounds (hummocks) and lower, flat areas of the peatland (hollows). Both rainfall treatments and water tables were manipulated, and CO2 fluxes were measured. Other studies have observed peat subsiding and tracking the water table downward when experiencing …

Meta-Analysis Reveals Challenges And Gaps For Genome-To-Phenome Research Underpinning Plant Drought Response, Anthony E. Melton, Stephanie J. Galla, Carlos Dave C. Dumaguit, John M.A. Wojahn, Stephen Novak, Marcelo Serpe, Peggy Martinez, Sven Buerki

Biology Faculty Publications and Presentations

Severe drought conditions and extreme weather events are increasing worldwide with climate change, threatening the persistence of native plant communities and ecosystems. Many studies have investigated the genomic basis of plant responses to drought. However, the extent of this research throughout the plant kingdom is unclear, particularly among species critical for the sustainability of natural ecosystems. This study aimed to broaden our understanding of genome-to-phenome (G2P) connections in drought-stressed plants and identify focal taxa for future research. Bioinformatics pipelines were developed to mine and link information from databases and abstracts from 7730 publications. This approach identified 1634 genes involved in …

Regenerative Agriculture Framework For Island Ecosystems Using São Miguel As A Case Study, Mya Hunter

Independent Study Project (ISP) Collection

Context: Regenerative agriculture is a farming approach that uses soil health as the entry point to contribute to multiple objectives, such as improved nutrient cycling and climate regulation. Farmers can apply different practices to reach these objectives. The objectives and practices, however, are not equally relevant or applicable for farming systems on island ecosystems and the local context.

Objectives: The main objective of this paper, therefore, is to find out how solutions towards regenerative agriculture can be identified and evaluated as such that they result in meaningful advice for farmers on island ecosystems in order to mitigate the …