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Articles 631 - 660 of 13248
Full-Text Articles in Life Sciences
Environmental Light Controls The Daily Organization Of Breathing By Activating Brn3b-Expressing Intrinsically Photosensitive Retinal Ganglion Cells In Mice, Aaron A. Jones, Allison R. Spears, Deanna M. Arble
Environmental Light Controls The Daily Organization Of Breathing By Activating Brn3b-Expressing Intrinsically Photosensitive Retinal Ganglion Cells In Mice, Aaron A. Jones, Allison R. Spears, Deanna M. Arble
Biological Sciences Faculty Research and Publications
Rhythmic, daily fluctuations in minute ventilation are controlled by the endogenous circadian clock located in the suprachiasmatic nucleus (SCN). While light serves as a potent synchronizer for the SCN, it also influences physiology and behavior by activating Brn3b-expressing, intrinsically photosensitive retinal ganglion cells (ipRGCs). It is currently unclear the extent to which the external light environment shapes daily ventilatory patterns independent of the SCN. To determine the relative influence of environmental light versus circadian timing on the organization of daily rhythms in minute ventilation, we used whole-body plethysmography to measure the breathing of mice housed on a non-entraining T28 cycle …
The Neural Mechanisms Of Visual Art Expertise During Different Stages Of The Creative Process: An Eeg Study, Kim N. Awa
The Neural Mechanisms Of Visual Art Expertise During Different Stages Of The Creative Process: An Eeg Study, Kim N. Awa
Graduate Theses and Dissertations
Generating and drafting ideas are creative processes linked to internal neural mechanisms, such as directed attentional states, reflected in alpha band synchronization patterns. Previous research has demonstrated that these mechanisms vary based on levels of expertise during creative tasks. However, few studies have examined the multifaceted nature of ideation and externalization across multiple stages of the creative process, particularly when accounting for domain-specific expertise in imagery and figural tasks. The present study investigates alpha band synchronicity (lower and upper) across visual art backgrounds, specifically among artists, intermediates, and non-artists, during three distinct stages of the creative process: thinking of ideas, …
Analyzing Milled Rice Breakage Patterns Under Diverse Environmental Settings, Devisree Chukkapalli
Analyzing Milled Rice Breakage Patterns Under Diverse Environmental Settings, Devisree Chukkapalli
Graduate Theses and Dissertations
This study comprehensively evaluates the effects of environmental conditions, transportation, and storage practices on the quality of milled rice using three cultivars: CLL16 (long grain pureline), XP753 (long grain hybrid), and Titan (medium grain pureline). Three distinct objectives guided the research: (1) assessing the impact of relative humidity (RH), temperature, and exposure duration on rice quality post-milling and post-storage; (2) analyzing seasonal and locational influences on rice quality during transportation and storage; and (3) investigating the effects of subfreezing storage on key quality attributes.
Under controlled environmental conditions, post-milling exposure (PME) caused significant quality degradation at higher RH (75% and …
Integrating Sustainability And Food Safety Through Quantitative Microbial Risk Assessment And Life Cycle Assessment Of Low-Moisture Foods, Jessica Bain
Graduate Theses and Dissertations
Food safety and sustainability are critical concerns in the food industry. However, these areas are often evaluated separately, leading to an incomplete understanding of the overall impact of food production on human health. This dissertation aims to integrate food safety with sustainability to provide a comprehensive assessment of the impact of low-moisture foods on human health, using the almond processing supply chain as a case study.
In addition to conducting life cycle assessments (LCA) of almond processing, wheat flour production, and dried apple processing, this dissertation aims to create a framework to bridge the gap between sustainability and food safety. …
Use Of Hatchery-Raised Fish In Validation Of Daily Age Estimates For Juvenile Common Snook, Philip W. Stevens, Kyle L. Williams, Meredith B. Pfennig, Ryan W. Schloesser, Alexis A. Trotter, Derek P. Crane
Use Of Hatchery-Raised Fish In Validation Of Daily Age Estimates For Juvenile Common Snook, Philip W. Stevens, Kyle L. Williams, Meredith B. Pfennig, Ryan W. Schloesser, Alexis A. Trotter, Derek P. Crane
Biology
Objective: We investigated the validity of daily age estimates for juvenile Common Snook Centropomus undecimalis by using sectioned and sanded sagittal otoliths. Methods: Common Snook have a protracted spawning season, which is problematic for validation of daily ages because a hatch date—needed to calculate age—cannot be reasonably assigned like it can for species with a short spawning period (<30 days). To help overcome this, two readers independently counted presumed daily increments in otoliths collected from hatchery-reared Common Snook of known age (100–240 days; n = 91). Result: Differences between known ages and those estimated from otoliths were small (mean absolute difference = 3.4 days) for individuals aged 100 days, but these differences increased after 100 days, mainly due to the crowding of increments along the otolith margin. Underestimation of ages was 8% at 120 days, 29% at 180 days, and 36% at 240 days. Conclusion: Ideally, analyses based on counts of daily increments in Common Snook otoliths should be limited to fish with an age of 100 days or younger.
Recreational Fishing For Western Rock Lobster: Estimates Of Participation, Effort And Catch In 2023/24, Claire B. Smallwood, Karina L. Ryan, Alissa C. Tate
Recreational Fishing For Western Rock Lobster: Estimates Of Participation, Effort And Catch In 2023/24, Claire B. Smallwood, Karina L. Ryan, Alissa C. Tate
Fisheries Research Reports
The Western Rock Lobster (WRL) (Panulirus cygnus) is the most commonly caught Rock Lobster (RL) species in Western Australia. Catches from the commercial and recreational sectors are required to determine and monitor Total Allowable Commercial Catch (TACC), Total Allowable Recreational Catch (TARC) and the proportion of Allowable Harvest Level (AHL) achieved. The TARC is set at 5% of the AHL and evaluated in the harvest strategy based on a 5-year average.
Data for the recreational sector are obtained using phone-recall surveys to provide annual estimates of participation, fishing effort and retained catch (by numbers) from recreational fishers who hold a …
Evaluation Of Industrial Hemp Cultivar And Biochar Rate To Remediate Heavy-Metal-Contaminated Soil From The Tar Creek Superfund Site, Usa, Dietrich V. Thurston, Kristofor R. Brye, David M. Miller, Philip A. Moore Jr., Donald M. Johnson, Mike Richardson
Evaluation Of Industrial Hemp Cultivar And Biochar Rate To Remediate Heavy-Metal-Contaminated Soil From The Tar Creek Superfund Site, Usa, Dietrich V. Thurston, Kristofor R. Brye, David M. Miller, Philip A. Moore Jr., Donald M. Johnson, Mike Richardson
Crop, Soil and Environmental Sciences Faculty Publications and Presentations
Soil contamination by cadmium (Cd), lead (Pb), and zinc (Zn) at the Tar Creek superfund site in northeast Oklahoma, United States, remains a threat to the environment and local ecosystem. Phytoremediation with industrial hemp (Cannabis sativa L.) and the use of biochar (BC) have been independently shown to be effective methods to remediate heavy-metal-contaminated soils. The objective of this greenhouse study was to evaluate the effects of industrial hemp cultivar (‘Carmagnola’ and ‘Jinma’), biochar rate (0, 2, 5, and 10% by volume), soil contamination level (low, medium, and high), and their interactions on above- (AG) and belowground dry matter …
Rice Response To Struvite And Other Phosphorus Fertilizers In A Phosphorus-Deficient Soil Under Simulated Furrow-Irrigation, Jonathan B. Brye, Diego Della Lunga, Kristofor R. Brye
Rice Response To Struvite And Other Phosphorus Fertilizers In A Phosphorus-Deficient Soil Under Simulated Furrow-Irrigation, Jonathan B. Brye, Diego Della Lunga, Kristofor R. Brye
Crop, Soil and Environmental Sciences Faculty Publications and Presentations
Wastewater-recovered phosphorus (P), in the form of the mineral struvite (MgNH4PO4⋅6H2O), may provide a sustainable alternative to decreasing rock-phosphate reserves. Struvite can be generated via precipitation methods, potentially reducing the amount of P runoff to aquatic ecosystems. The objective of this greenhouse tub study was to evaluate the effects of chemically- and electrochemically precipitated struvite (CPST and ECST, respectively) on above- and belowground plant response in a hybrid rice (Oryza sativa) cultivar grown using furrow-irrigation compared to other common fertilizer-P sources [i.e., triple super phosphate (TSP) and diammonium phosphate (DAP)]. Rice was …
Interpreting The Spatial Distribution Of Soil Properties With A Physically-Based Distributed Hydrological Model, Zamir Libohova, Marcelo Mancini, Hans Edwin Winzeler, Quentin D. Read, Ning Sun, Dylan Beaudette, Candiss Williams, Joshua Michael Blackstock, Sergio H.G. Silva, Nilton Curi, Kabindra Adhikari, Amanda Ashworth, Joshua O. Minai, Phillip R. Owens
Interpreting The Spatial Distribution Of Soil Properties With A Physically-Based Distributed Hydrological Model, Zamir Libohova, Marcelo Mancini, Hans Edwin Winzeler, Quentin D. Read, Ning Sun, Dylan Beaudette, Candiss Williams, Joshua Michael Blackstock, Sergio H.G. Silva, Nilton Curi, Kabindra Adhikari, Amanda Ashworth, Joshua O. Minai, Phillip R. Owens
Crop, Soil and Environmental Sciences Faculty Publications and Presentations
Digital soil maps are commonly data-driven as the development of physically-based models for soil mapping is difficult due to the complexity of soils. However, physically-based hydrologic models have been successful in simulating water dynamics. Since water movement is a major driver of pedogenesis, the physical rules that govern water movement might help explain and predict the spatial variation of soil properties. Here, we demonstrate the novel use of a physically-based, distributed hydrologic model to inform the spatial distribution of soil properties. The Distributed Hydrology Soil Vegetation Model (DHSVM) was utilized to simulate soil moisture content (SM) and water table …
Draft Assembly And Annotation Of The Cuban Crocodile (Crocodylus Rhombifer) Genome, Robert W. Meredith, Yoamel Milián-García, John Gatesy, Michael A. Russello, George Amato
Draft Assembly And Annotation Of The Cuban Crocodile (Crocodylus Rhombifer) Genome, Robert W. Meredith, Yoamel Milián-García, John Gatesy, Michael A. Russello, George Amato
Department of Biology Faculty Scholarship and Creative Works
Objectives: The new data provide an important genomic resource for the Critically Endangered Cuban crocodile (Crocodylus rhombifer). Cuban crocodiles are restricted to the Zapata Swamp in southern Matanzas Province, Cuba, and readily hybridize with the widespread American crocodile (Crocodylus acutus) in areas of sympatry. The reported de novo assembly will contribute to studies of crocodylian evolutionary history and provide a resource for informing Cuban crocodile conservation. Data description: The final 2.2 Gb draft genome for C. rhombifer consists of 41,387 scaffolds (contigs: N50 = 104.67 Kb; scaffold: N50-518.55 Kb). Benchmarking Universal Single-Copy Orthologs (BUSCO) identified 92.3% of the 3,354 genes …
The Effects Of Mosaicism On Biological And Clinical Markers Of Alzheimer's Disease In Adults With Down Syndrome, Laura Xicota, Lam-Ha T. Dang, Alice Lee, Sharon Krinsky-Mchale, Deborah Pang, Lisa Melilli, Sid E. O’Bryant, Rachel L. Henson, Charles Laymon, Florence Lai, H. Diana Rosas, Beau Ances, Ira Lott, Christy Hom, Bradley Christian, Sigan Hartley, Shahid Zaman, Elizabeth Head, Mark Mapstone, Zhezhen Jin, Wayne Silverman, Nicole Schupf, Benjamin Handen, Joseph H. Lee, Alzheimer’S Biomarker Consortium – Down Syndrome (Abc-Ds)
The Effects Of Mosaicism On Biological And Clinical Markers Of Alzheimer's Disease In Adults With Down Syndrome, Laura Xicota, Lam-Ha T. Dang, Alice Lee, Sharon Krinsky-Mchale, Deborah Pang, Lisa Melilli, Sid E. O’Bryant, Rachel L. Henson, Charles Laymon, Florence Lai, H. Diana Rosas, Beau Ances, Ira Lott, Christy Hom, Bradley Christian, Sigan Hartley, Shahid Zaman, Elizabeth Head, Mark Mapstone, Zhezhen Jin, Wayne Silverman, Nicole Schupf, Benjamin Handen, Joseph H. Lee, Alzheimer’S Biomarker Consortium – Down Syndrome (Abc-Ds)
Neurology Faculty Publications
Background Individuals with Down syndrome (DS) are at high risk of early-onset Alzheimer’s disease (AD); yet, some 20 percent do not develop any signs of dementia until after 65 years or in their lifetime. Mosaicism could contribute to this phenotypic variation, where some disomic cells could lead to lower levels of gene products from chromosome 21.
Methods We examined longitudinal neuropsychological and biomarker data from two large studies of DS: the Alzheimer Biomarker Consortium–Down syndrome study (ABC-DS) (n = 357); and a legacy study (n = 468). We assessed mosaicism using karyotyping or GWAS data. Participants had data on plasma …
Targeted Long-Read Sequencing To Quantify Methylation Of The C9orf72 Repeat Expansion, Evan Udine, Nicole Finch, Mariely Dejesus-Hernandez, Jazmyne L. Jackson, Matthew C. Baker, Siva Arumugam Saravanaperumal, Eric Wieben, Mark T. W. Ebbert, Jaimin Shah, Leonard Petrucelli, Rosa Rademakers, Björn Oskarsson, Marka Van Blitterswijk
Targeted Long-Read Sequencing To Quantify Methylation Of The C9orf72 Repeat Expansion, Evan Udine, Nicole Finch, Mariely Dejesus-Hernandez, Jazmyne L. Jackson, Matthew C. Baker, Siva Arumugam Saravanaperumal, Eric Wieben, Mark T. W. Ebbert, Jaimin Shah, Leonard Petrucelli, Rosa Rademakers, Björn Oskarsson, Marka Van Blitterswijk
Neurology Faculty Publications
Background The gene C9orf72 harbors a non-coding hexanucleotide repeat expansion known to cause amyotrophic lateral sclerosis and frontotemporal dementia. While previous studies have estimated the length of this repeat expansion in multiple tissues, technological limitations have impeded researchers from exploring additional features, such as methylation levels.
Methods We aimed to characterize C9orf72 repeat expansions using a targeted, amplification-free long-read sequencing method. Our primary goal was to determine the presence and subsequent quantification of observed methylation in the C9orf72 repeat expansion. In addition, we measured the repeat length and purity of the expansion. To do this, we sequenced DNA extracted from …
Understanding And Intervening In Children's Tick Risk Perceptions And Protective Behaviors: A Grounded Theory, Ariel Dawdy
Understanding And Intervening In Children's Tick Risk Perceptions And Protective Behaviors: A Grounded Theory, Ariel Dawdy
Department of Entomology: Dissertations, Theses, and Student Research
Children, ages 8 years and younger, are at a particularly high risk of contracting a tick-borne disease. This is partially due to the misconceptions spread about tick protective behavior and a poor understanding of how antibiotic treatment can help. Because most communities and families believe that tick control is the individual’s responsibility, looking at the interaction between ticks and human children is essential to understanding the individual’s motivations to protect themselves. To help alleviate the number of individuals contracting tick-borne diseases, misconceptions must be addressed, intervention programs implemented, and a behavioral change must occur. This study used a qualitative research …
Soybean Cyst Nematode (Heterodera Glycines Ichinohe) Virulence Assay Against Resistance Sources In Nebraska, Pratibha Karki
Soybean Cyst Nematode (Heterodera Glycines Ichinohe) Virulence Assay Against Resistance Sources In Nebraska, Pratibha Karki
Department of Plant Pathology: Dissertations, Theses, and Student Research
Soybean cyst nematode (SCN, Heterodera glycines Ichinohe), one of the major yield-limiting pathogens of soybean, is currently found in 60 counties of Nebraska that produce more than 90% of the state’s soybean. Often, yield loss occurs without any above-ground symptoms, which makes it difficult to manage. The primary management option is the use of SCN-resistant varieties. Several soybean plant introductions serve as resistance sources against SCN. Unfortunately, the single source, PI 88788, is used in approximately 90% of resistant varieties and its prolonged use has increased the virulence status of SCN in the U.S. A study was conducted to assess …
Characterization Of The Final Enzyme In The Coenzyme M Biosynthesis Pathway In Methanosarcina, Connor John Hines
Characterization Of The Final Enzyme In The Coenzyme M Biosynthesis Pathway In Methanosarcina, Connor John Hines
Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–
Methanogenesis is known to be one of the oldest forms of energy generation on our planet. Methanogens rely on this method of energy conservation and have evolved to metabolize a variety of substrates, including the waste products of other organisms. This feature has made methanogens beneficial to both wastewater treatment and landfill-to-energy projects. Methane itself is a greenhouse gas twenty times more potent than carbon dioxide, viewed as a particularly influential contributor to global greenhouse emissions. Climate change was known to be on the horizon throughout the 20th century but has made itself known vocally during this 21st …
Spatial Ecology Of American Bison On Vermejo Park Ranch, New Mexico, Kate Ann Asmus
Spatial Ecology Of American Bison On Vermejo Park Ranch, New Mexico, Kate Ann Asmus
School of Natural Resources: Dissertations, Theses, and Student Research
American bison (Bison bison) are a keystone species that impact grassland productivity, plant diversity, and landscape heterogeneity. We used GPS telemetry and a replicate herbivore grazing experiment on Vermejo Park Ranch in northeastern New Mexico to advance understanding of bison spatial ecology and grazing dynamics. First, we evaluated the potentially disparate influences of forage productivity and site fidelity on the size and selection of home ranges of bison. Home range size was strongly negatively influenced by forage productivity. However, home range selection was influenced more strongly by site fidelity than spatial variation in forage, as bison selected home …
The Endocrine And Body Composition Responses To Accentuated Eccentric Loading Performed In Cluster Sets During A Strength–Endurance Training Block, Kurt W. Mcdowell, Alex Long, Daniel Gahreman, D. Andrew Nelson, Nicholas J. Goode, Ryan P. Lis, Sungwon Chae, Satoshi Mizuguchi, Marten Baur, Kevin F. Breuel, Marco Duca, John P. Wagle, Andy C. Fry, Michael H. Stone
The Endocrine And Body Composition Responses To Accentuated Eccentric Loading Performed In Cluster Sets During A Strength–Endurance Training Block, Kurt W. Mcdowell, Alex Long, Daniel Gahreman, D. Andrew Nelson, Nicholas J. Goode, Ryan P. Lis, Sungwon Chae, Satoshi Mizuguchi, Marten Baur, Kevin F. Breuel, Marco Duca, John P. Wagle, Andy C. Fry, Michael H. Stone
Kinesiology
Featured Application: Research on the endocrine changes from AEL training is limited, especially for long-term effects. This study suggests that combining AEL with CS might offer similar or slightly better results compared to traditional training. However, the practical challenges, such as increased training monotony and strain, may outweigh the minimal benefits. The extra cost, time, and effort required for AEL, especially in large team settings, might not be justified. Additionally, individual differences in optimal loading prescriptions could complicate its use, making traditional methods more efficient. This study investigated the endocrine responses to accentuated eccentric loading (AEL) paired with cluster sets …
An Extensive Exploration Of Generalist Microbotryum Species Through Host Interactions., Emilee Walters
An Extensive Exploration Of Generalist Microbotryum Species Through Host Interactions., Emilee Walters
College of Arts & Sciences Senior Theses
The Microbotryum species complex is a group of fungi, commonly known as anther smuts. Anther smuts are plant parasites that must invade a host plant in order to fulfill their life cycle. As the Microbotryum fungus grows, it sterilizes the host plant, such that infected plants produce fungal teliospores instead of pollen on the male reproductive organs and female reproductive structures do not mature. Microbotryum usually exists as a specialist species, however, there is evidence that several species of anther smuts can exist as generalist species. Comparisons of the infection process and the resulting response of both parasite and host …
Induced Systemic Resistance Against Nematodes By Plant Growth-Promoting Microbes In Potatoes, Cole Grannan
Induced Systemic Resistance Against Nematodes By Plant Growth-Promoting Microbes In Potatoes, Cole Grannan
Master's Theses
Biofertilizers consist of plant growth-promoting microorganisms that establish symbiotic relationships with plant roots and stems. These beneficial microbes play a crucial role in enhancing plant defenses against various threats including insects, nematodes, and microbial pathogens. The purpose of this study was to investigate the effectiveness of two fungal biofertilizers (an endophytic strain of Beauveria bassiana (BA) and a mixture of arbuscular mycorrhizal (AM) fungi), specifically their ability to induce systemic resistance against plant- parasitic nematodes (PPNs) in potatoes (Solanum tuberosum cv. Masquerade) under controlled greenhouse conditions. The study utilized soil collected from Colorado State University’s San Luis Valley (SLV) Research …
Soil Data From Spring Run Conservation Area, Dayton, Ohio, Madelaine Gregory, Valerie N. Thurston, Michaela J. Woods, Ryan W. Mcewan
Soil Data From Spring Run Conservation Area, Dayton, Ohio, Madelaine Gregory, Valerie N. Thurston, Michaela J. Woods, Ryan W. Mcewan
Data Files: Ecosystem Restoration Following Industrial Agriculture
This spreadsheet contains soil data from an experiment in the Spring Run Conservation Area in Dayton, Ohio, USA (39° 46 '42.2"N, 84° 20' 52.5"W). Details of the data collection can be found in the master's thesis "The State of Soil Streamlines Secondary Succession: Remediating Degraded Soils in a Post-Agricultural Field."
Short-Term Soil Fungal Community Dynamics Following Fire In Mediterranean Climate-Type Banksia Woodlands, Aaron J. Brace, Katinka X. Ruthrof, Ben P. Miller, Joseph B. Fontaine, Anna J.M. Hopkins
Short-Term Soil Fungal Community Dynamics Following Fire In Mediterranean Climate-Type Banksia Woodlands, Aaron J. Brace, Katinka X. Ruthrof, Ben P. Miller, Joseph B. Fontaine, Anna J.M. Hopkins
Research outputs 2022 to 2026
Fire is a dominant ecosystem process in many Mediterranean climate type ecosystems, and is predicted to increase in severity and frequency, shifting away from previous regimes in many regions. Responses of flora and fauna to fire are relatively well studied, but less is known about the responses of belowground microbiota. We quantified soil fungal dynamics over the first 12–15 months after fire, focusing on attributes of the fire regime (season, interval, severity). Soil samples were collected from three sites in a threatened woodland ecosystem in southwestern Australia, a Mediterranean-type climate region. Fungal taxa were identified via high throughput sequencing of …
Development Of An In Vitro Squamous Metaplasia Model Using Airway Basal Stem Cells, Arash Tahmasbi
Development Of An In Vitro Squamous Metaplasia Model Using Airway Basal Stem Cells, Arash Tahmasbi
Electronic Theses, Projects, and Dissertations
Squamous metaplasia (SM) of the airway epithelium is an abnormal condition that is caused by exposure to airborne toxicants, cigarette smoke, pollutants, and pathogens. Since SM of the airway was first documented in the 1970s, data on this epithelial disease remain limited. More research is needed to fully understand this epithelial disorder and to prevent its progression into severe illnesses such as chronic bronchitis (CB), COPD, and squamous cell carcinoma. We developed 3D models of SM using airway basal stem cells (ABSCs) isolated from lung obtained from postmortem human donors. The ABSCs were cultured at the air-liquid interface (ALI) for …
The Effects Of Wildfires On Predation Risk, Perch Selection, And Background-Matching In Western Fence Lizards, Elmer Ernesto Gutierrez
The Effects Of Wildfires On Predation Risk, Perch Selection, And Background-Matching In Western Fence Lizards, Elmer Ernesto Gutierrez
Electronic Theses, Projects, and Dissertations
Fires are a naturally occurring phenomenon, driving a range of behavioral, reproductive, and morphological adaptations in wildlife. However, we are now living in a new geological epoch—the Pyrocene—characterized by human-induced extreme fire behavior. This shift results in a need to understand how animals survive and adapt in post-fire environments. In this study, we investigated the following questions: (1) Does predation risk increase in burned habitats after a fire? (2) How does dorsal darkness morphology vary between burned and unburned habitats? and (3) Do animals select perches that enhance their background-matching in post-fire environments? We used the Western Fence Lizard ( …
Random C-Peptide And Islet Antibodies At Onset Predict Β Cell Function Trajectory And Insulin Dependence In Pediatric Diabetes, Mustafa Tosur, Saima Deen, Xiaofan Huang, Serife Uysal, Marcela Astudillo, Richard A Oram, Maria J Redondo, Farook Jahoor, Ashok Balasubramanyam
Random C-Peptide And Islet Antibodies At Onset Predict Β Cell Function Trajectory And Insulin Dependence In Pediatric Diabetes, Mustafa Tosur, Saima Deen, Xiaofan Huang, Serife Uysal, Marcela Astudillo, Richard A Oram, Maria J Redondo, Farook Jahoor, Ashok Balasubramanyam
Children’s Nutrition Research Center Staff Publications
Objective: Identification of prognostic biomarkers in pediatric diabetes is important for precision medicine. We assessed whether C-peptide and islet autoantibodies are useful to predict the natural history of children with new-onset diabetes.
Methods: We prospectively studied 72 children with new-onset diabetes (median follow-up: 8 months) by applying the Aβ classification system ("A+": islet autoantibody positive, "β+": random serum C-peptide ≥1.3 ng/mL at diagnosis). Beta-cell function was assessed longitudinally with 2 hours postprandial/stimulated urinary C-peptide-to-creatinine ratio (UCPCR) 3-12 weeks (V1) and 6 to 12 months after diagnosis (V2). We obtained a type 1 diabetes genetic risk score for each participant, and …
Unravelling Large-Scale Patterns And Drivers Of Biodiversity In Dry Rivers, Arnaud Foulquier, Thibault Datry, Roland Corti, Daniel Von Schiller, Klement Tockner, Rachel Stubbington, Mark O. Gessner, Frédéric Boyer, Marc Ohlmann, Wilfried Thuiller, Delphine Rioux, Christian Miquel, Ricardo Albariño, Daniel C. Allen, Florian Altermatt, Maria Isabel Arce, Shai Arnon, Damien Banas, Andy Banegas-Medina, Erin Beller, Melanie L. Blanchette, Joanna Blessing, Iola Gonçalves Boëchat, Kate Boersma, Michael Bogan, Núria Bonada
Unravelling Large-Scale Patterns And Drivers Of Biodiversity In Dry Rivers, Arnaud Foulquier, Thibault Datry, Roland Corti, Daniel Von Schiller, Klement Tockner, Rachel Stubbington, Mark O. Gessner, Frédéric Boyer, Marc Ohlmann, Wilfried Thuiller, Delphine Rioux, Christian Miquel, Ricardo Albariño, Daniel C. Allen, Florian Altermatt, Maria Isabel Arce, Shai Arnon, Damien Banas, Andy Banegas-Medina, Erin Beller, Melanie L. Blanchette, Joanna Blessing, Iola Gonçalves Boëchat, Kate Boersma, Michael Bogan, Núria Bonada
Research outputs 2022 to 2026
More than half of the world’s rivers dry up periodically, but our understanding of the biological communities in dry riverbeds remains limited. Specifically, the roles of dispersal, environmental filtering and biotic interactions in driving biodiversity in dry rivers are poorly understood. Here, we conduct a large-scale coordinated survey of patterns and drivers of biodiversity in dry riverbeds. We focus on eight major taxa, including microorganisms, invertebrates and plants: Algae, Archaea, Bacteria, Fungi, Protozoa, Arthropods, Nematodes and Streptophyta. We use environmental DNA metabarcoding to assess biodiversity in dry sediments collected over a 1-year period from 84 non-perennial rivers across 19 countries …
Predation Rates On Flatback Turtle Natator Depressus Eggs And Hatchlings At An Island Rookery, Casper Avenant, Sabrina Fossette, Scott Whiting, Glenn A. Hyndes
Predation Rates On Flatback Turtle Natator Depressus Eggs And Hatchlings At An Island Rookery, Casper Avenant, Sabrina Fossette, Scott Whiting, Glenn A. Hyndes
Research outputs 2022 to 2026
Predation can significantly threaten the vulnerable egg and hatchling stages of sea turtles, yet for most populations this remains poorly quantified for use in conservation. We provided the first quantified predation rates of flatback turtle eggs and hatchlings at Thevenard Island, a medium-sized rookery on the northwest coast of Australia, with a focus on ghost crabs as potential predators. Burrow densities were used as proxy for ghost crab densities, while start- and end-of-season nest inventories and infrared videography were used to quantify egg and hatchling predation, respectively. Inventories of 27 nests suggested a mean hatching success of 74.2 ± 4.6% …
2024 Personal-Sized Seedless Watermelon Cultivar Evaluation In Indiana, Wenjing Guan
2024 Personal-Sized Seedless Watermelon Cultivar Evaluation In Indiana, Wenjing Guan
Midwest Vegetable Trial Reports
The annual watermelon cultivar evaluation trial is conducted at Southwest Purdue Agricultural Center (SWPAC) in Vincennes, Indiana. It evaluates yield, fruit quality, and overall plant performance of commercial watermelon cultivars and advanced breeding lines. Purdue Extension and seed companies financially support the trial. The 2024 personal-sized triploid watermelon cultivar trial evaluated 18 cultivars.
Anthocyanin Extraction Methods: Synthesis Of Morpho-Anatomical Knowledge For Decision-Making Based On Decision-Tree, Gabriel Laquete De Barros, F.T.S. Silva, R.S. Teixeira, J.G. Wagner, C.V. Rombaldi, M. Vizzotto, A. Ubeyitogullari, L. Nora
Anthocyanin Extraction Methods: Synthesis Of Morpho-Anatomical Knowledge For Decision-Making Based On Decision-Tree, Gabriel Laquete De Barros, F.T.S. Silva, R.S. Teixeira, J.G. Wagner, C.V. Rombaldi, M. Vizzotto, A. Ubeyitogullari, L. Nora
Biological and Agricultural Engineering Faculty Publications and Presentations
Efficient anthocyanin extraction from emerging food matrices is essential in food technology and requires a precise, consistent, and clear extraction method. This study aimed to develop a decision-tree tool for selecting the optimal anthocyanin extraction technique. A comprehensive data synthesis covering the years 2018 to 2023 was conducted using leading academic databases, including Web of Science, Scopus, Medline, and SciELO. A combination of systematic and non-systematic approaches was employed to guide the decision-making process. The keywords used included “anthocyanin extraction methods,” and studies with more than 10 citations were prioritized, along with recent and relevant publications. Thirty-six articles were analyzed …
Individual Dynamic Prediction For Cure And Survival Based On Longitudinal Biomarkers, Can Xie, Xuelin Huang, Ruosha Li, Alexander Tsodikov, Kapil Bhalla
Individual Dynamic Prediction For Cure And Survival Based On Longitudinal Biomarkers, Can Xie, Xuelin Huang, Ruosha Li, Alexander Tsodikov, Kapil Bhalla
Faculty, Staff and Student Publications
To optimize personalized treatment strategies and extend patients' survival times, it is critical to accurately predict patients' prognoses at all stages, from disease diagnosis to follow-up visits. The longitudinal biomarker measurements during visits are essential for this prediction purpose. Patients' ultimate concerns are cure and survival. However, in many situations, there is no clear biomarker indicator for cure. We propose a comprehensive joint model of longitudinal and survival data and a landmark cure model, incorporating proportions of potentially cured patients. The survival distributions in the joint and landmark models are specified through flexible hazard functions with the proportional hazards as …
Investigation Of Magnesium-Potassium Phosphates As Potential Nuclear Waste Form For The Immobilization Of Minor Actinides, Hans Conrad Zur Loye, Petr Vecernik, Monika Kiselova, Vlastislav Kašpar, Hana Korenkova, Vlastimil Miller, Petr Bezdicka, Jan Šubrt, Natalija Murafa, Volodymyr Shkuropatenko, Sergey Sayenko
Investigation Of Magnesium-Potassium Phosphates As Potential Nuclear Waste Form For The Immobilization Of Minor Actinides, Hans Conrad Zur Loye, Petr Vecernik, Monika Kiselova, Vlastislav Kašpar, Hana Korenkova, Vlastimil Miller, Petr Bezdicka, Jan Šubrt, Natalija Murafa, Volodymyr Shkuropatenko, Sergey Sayenko
Faculty Publications
Several recent studies have evaluated technologies of spent nuclear fuel processing specifically for solidifying transuranic (TRU) waste as a by-product of fission. Of the TRU group, plutonium and the minor actinides will be responsible for the bulk of the radiotoxicity and heat generation of spent nuclear fuel in the long term (300 to 20,000 years). In this study, we investigated magnesium potassium phosphate (MKP)-based compounds as host waste forms for the encapsulation of inactive trivalent Nd and Sm as analogues of the minor trivalent actinides, Am and Cm. Waste forms were fabricated under ambient atmospheric conditions by adding 5 wt.% …