Life Sciences Commons^™

Table Of Contents, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

Business Meeting Report (Secretary's And Treasurer's Report), Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

Journal Acknowledgements And Editorial Board, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

Academy Presidents And Institutional Members, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

Journal Of The Arkansas Academy Of Science Volume 78, Academy Editors

Journal of the Arkansas Academy of Science

No abstract provided.

Grass Rejection By Capybaras Can Be Used As A Possible Strategy To Mitigate Road Accidents, André Luiz Gama Nogueira, Sérgio Luiz Gama Nogueira-Filho, Selene Siqueira Da Cunha Nogueira, Denis Sato, Natasha Camilo Maximiano Da Silva, Lilian Elgalise Techio Pereira, Michael Mendl, Adroaldo José Zanella

Human–Wildlife Interactions

Feeding management can be a good strategy for avoiding wildlife–vehicle collisions (WVCs), which are a worldwide concern. In this study, we aimed to identify grass species that capybaras (Hydrochoerus hydrochaeris) reject as feeding material. These species could be planted to make roadsides less attractive to capybaras and, consequently, decrease WVCs involving this species. We planted 3 grass species (Brachiaria decumbens cv. Basilisk, B. hybrid Mavuno, and Zoysia japonica) in 4 blocks, applying a randomized-complete blocks design. The first 2 species we assumed would be rejected, since some animals do not consume them due to their high …

How Do Daily Survival Rates Of Nests Change During The Incubation Period For Ducks Nesting On Great Salt Lake Marshes?, Mark E. Bell, Michael R. Conover

Human–Wildlife Interactions

We examined how daily survival rates (DSRs) of duck nests change over the course of the incubation period using cinnamon teal (Spatula cyanoptera), mallards (Anas platyrhynchos), and gadwalls (Mareca strepera) nesting in the marshes around Great Salt Lake, Utah, USA. Cameras observed 138 nests, allowing us to know the exact day when chicks hatched or nests were depredated. We measured the course of the incubation period based on 3 different time scales: (1) days since we first located the nest, (2) embryo age, and (3) ordinal day. We tested 3 hypotheses about the relationship …

Survival Of Translocated Coyotes In The Chicago Metropolitan Area, Usa, Charlotte R. Milling, Chris Anchor, Stanley D. Gehrt

Human–Wildlife Interactions

For nuisance animals, the general public perceives translocation to be a humane alternative to lethal control measures, but survival of translocated wildlife is often quite low due in part to increased movement post-release. Thus, for common species whose relocation generally serves a social rather than conservation purpose, translocation might not be correctly characterized when presented as nonlethal. We quantified release site fidelity and survival of coyotes (Canis latrans) fitted with very high frequency radio-collars and translocated within the Chicago Metropolitan Area, Illinois, USA, from 2000 to 2006. We also compared survival for 14 weeks post-collaring for our translocated …

Table Of Contents

Human–Wildlife Interactions

This is the table of contents.

Dust Management At An Active Construction Area Affects Monarch Distribution, Amy W. O'Donnell, Jeffery D. Sullivan, Carl R. Callahan, Peter C. Mcgowan, Diann J. Prosser

Human–Wildlife Interactions

The North American population of monarch butterflies (Danaus plexippus) is experiencing dramatic declines, necessitating investigations into challenges facing this species that can be resolved through management actions. For instance, dust made airborne by heavy equipment driving along a dirt road can settle on roadside vegetation, resulting in reduced use by monarchs. Dust accumulation on areas where floral nectaries such as leaves, stems, and flowers may be present could reduce the ability of pollinators, such as monarchs, to access nectar from flowering plants needed during migration. One such challenge was observed on Poplar Island, an island restoration project located in …

That’S Not In My Position Description: A Discourse Analysis Of Sbae Migratory Context, Becky Haddad, Jonathan Velez, Josh Stewart, Haden Botkin

Department of Agricultural Leadership, Education, and Communication: Faculty Publications

While the choice to move to a new school is personal, many play a role in justifying that choice for the mobile teacher. These justifiers—or influencers—make up the socializing network for teachers (in this case, SBAE teachers) in new settings. Our study outlined how mobile SBAE teachers rationalize the choice to change schools and validate career moves. We used a positioning theory approach to discourse to give migrators (teachers who change schools) and influencers a voice. Positioning theory allowed us to situate migrators as they reflected on their choice to change school districts, and influencers as they recounted their …

Mangroves Of The Warm Temperate Northwest Atlantic, Daniel A. Friess, Ena L. Suárez, Anna R. Armitage, Cheryl Doughty, Laura C. Feher, Ilka C. Feller, Alejandro Fierro, Kara R. Radabaugh, Lorae T. Simpson, William C. V Vervaeke, Carlos Zamora-Tovar

School of Earth, Environmental, & Marine Sciences Faculty Publications

The ‘Mangroves of the Warm Temperate Northwest Atlantic’ province is a regional ecosystem subgroup (level 4 unit of the IUCN Global Ecosystem Typology). It includes the marine ecoregions of Carolinian and Northern Gulf of Mexico. The biota is characterized by 3 species of mangroves: Avicennia germinans, Laguncularia racemosa, and Rhizophora mangle, and 1 mangrove associate Conocarpus erectus, though not all species are equally distributed throughout the province. Mangroves in this province cross the USA and Mexico and are quite unique, as they exist at the latitudinal range limit of the mangrove ecosystem. The majority of mangroves in this province are …

The Development And Evaluation Of A Method For Complete Collagenase I Digestion Of Bos Taurus Bone Samples, Reilly Price

Master of Science in Forensic Science Directed Research Projects

Current methods for processing aged forensic bone samples for DNA analysis involve pulverization and organic extraction, which further destroys already degraded DNA and uses large amounts of limited samples. Additionally, the success rates for this type of analysis vary widely as homogenization incorporates PCR inhibitors into the sample. Little research has explored how pulverization results in DNA damage in profiles obtained from skeletal remains. This study proposes an enzymatic digestion method to separate osteocytes from PCR inhibitors in the extracellular bone matrix to improve the quality and quantity of DNA isolated from aged bone samples. The technique described here used …

Further Optimization Of A Simplified Protocol For Tooth Sample Preparation For Analysis Using The Applied Biosystems™ Rapidhit™ Id Instrument, Yen H. Dang

Master of Science in Forensic Science Directed Research Projects

Due to the destructive nature of mass casualty incidents (MCIs) or mass fatality events (MFEs), tooth samples are often one of the only viable sources for Disaster Victim Identification (DVI) because of the incredible integrity of the enamel layer surrounding the tooth. However, the resilient structure of the tooth requires harsh chemicals and a labor-intensive sample preparation protocol to ensure successful STR profile development. Considering this difficulty, one of the promising resolutions is the Applied Biosystems RapidHIT™ ID ID platform, which is a fully automated system that is designed to perform cell lysis, DNA isolation, polymerase chain reaction (PCR) amplification, …

Facilitative And Competitive Interactions Among Dune Grass Species In Monoculture And Polyculture Communities, Anne M. Sciolino

Theses and Dissertations

Coastal dunes are natural barriers between land and sea and are imperative to the protection and preservation of inland ecosystems and human infrastructure. However, due to global warming, seal level rise, and coastal development, coastal dunes are under constant threat of destruction. Restoration efforts have been implemented to rebuild the protective function of dunes through the planting of dune building grasses. Dune grasses build and maintain these vital sand dunes. However, little is known about facilitative and competitive relationships among the grasses. In order to maximize restoration efforts, research is needed to better understand the biotic interactions among restorative grass …

Evaluation Of Alternative Methods For Dna Recovery Of Compromised Skeletal Remains, Ciara N. Rhodes

Theses and Dissertations

Skeletal remains frequently serve as the sole source of genetic material available for developing a profile in cases concerning unidentified human remains or mass casualties. Nevertheless, as unidentified skeletal remains age and are exposed to uncontrolled environmental conditions, the success rates of conventional methods of bone analysis diminish significantly. The physical and mechanical processing of skeletal remains into fine powder for DNA isolation and downstream analysis can substantially impact the quality and quantity of recoverable genetic information. This concern may be exacerbated when dealing with degraded forensic skeletal remains. Few studies have explored whether pulverization of bone samples contributes to …

Opossums And Pathogens: A Survey Of Vector-Borne And Zoonotic Pathogens From Didelphis Virginiana In The Midwest, Usa, Cassandra C. P. Strehl

Masters Theses

Didelphis virginiana are at elevated risk of exposure to many zoonotic and vector-borne pathogens (ZVBP) as a result of their unfastidious diets, large geographic ranges, and diverse habitat types. Didelphis virginiana are synanthropic animals, which is concerning considering the spillover risk of pathogens D. virginiana present as a result. 81 D. virginiana from Ohio and Illinois were screened for Rickettsia spp., Mycoplasma spp., Borrelia burgdorferi, Trypanosoma cruzi, and apicomplexan pathogens. Live D. virginiana were trapped in wire cage traps to perform venipuncture for blood collection. Samples collected as roadkill or from animal control companies were dissected and spleen …

The Sewage Microbiome Dynamics Of Different Serving Neighborhoods In Charleston, Illinois, Sandra Chiamaka Okoye

Masters Theses

The complex microbial ecosystem within sewage systems holds significant implications for environmental and public health. Unlike studies on wastewater treatment plant microbiomes, upstream sewage systems have not been studied widely. This research investigated the dynamic sewage microbiome across diverse serving neighborhoods in Charleston, Illinois, encompassing residential, hospital, industrial, and university areas. Drawing upon recent advancements in microbiome research, the study aimed to unravel the spatial and temporal variations in microbial structures. Three times between June to December 2023 sewage samples were collected from manholes in the areas mentioned above. Community DNA was extracted and sequenced for the V4-V5 region of …

Molecular Understanding And Design Of Deep Eutectic Solvents And Proteins Using Computer Simulations And Machine Learning, Usman Lame Abbas

Theses and Dissertations--Chemical and Materials Engineering

Hydrophobic deep eutectic solvents (DESs) have emerged as excellent extractants. A major challenge is the lack of an efficient tool to discover DES candidates. Currently, the search relies heavily on the researchers’ intuition or a trial-and-error process, which leads to a low success rate or bypassing of promising candidates. DES performance depends on the heterogeneous hydrogen bond environment formed by multiple hydrogen bond donors and acceptors. Understanding this heterogeneous hydrogen bond environment can help develop principles for designing high performance DESs for extraction and other separation applications. This work investigates the structure and dynamics of hydrogen bonds in hydrophobic DESs …

Myokine Probdnf-P75ntr Signaling In Skeletal Muscle Injury And Sterile Inflammation, Katherine Aby

Dissertations and Theses

Originally discovered in the brain, brain-derived neurotrophic factor (BDNF) has been shown to be expressed and released from skeletal muscle as a myokine. However, the function of myokine BDNF is not fully understood. Of interest to this study is the function of the BDNF precursor proBDNF in skeletal muscle. We first show that skeletal muscle expresses unique BDNF splice variants compared to the brain, and at the protein level, skeletal muscle expresses significantly more proBDNF than mature BDNF under basal conditions. Consistent with this, expression of major protein convertases in skeletal muscle were significantly lower. The role of myokine proBDNF …

Simultaneous Evaluation Of Tibiofemoral And Patellofemoral Mechanics In Total Knee Arthroplasty: A Combined Experimental And Computational Approach, Yashar A. Behnam, Ahilan Anantha Krishnan, Hayden Wilson, Chadd W. Clary

Center for Orthopaedic Biomechanics: Faculty Scholarship

Contemporary total knee arthroplasty (TKA) has not fully restored natural patellofemoral (P-F) mechanics across the patient population. Previous experimental simulations have been limited in their ability to create dynamic, unconstrained, muscle-driven P-F articulation while simultaneously controlling tibiofemoral (T-F) contact mechanics. The purpose of this study was to develop a novel experimental simulation and validate a corresponding finite element model to evaluate T-F and P-F mechanics. A commercially available wear simulator was retrofitted with custom fixturing to evaluate whole-knee TKA mechanics with varying patella heights during a simulated deep knee bend. A corresponding dynamic finite element model was developed to validate …

Sediment Carbon Storage In Subtidal Beds Of The Invasive Seagrass Halophila Stipulacea Along An Extreme Water Depth Gradient, St. Thomas, U.S. Virgin Islands, Demian A. Willette, Kelsey M. Vaughn, Allie Durdall, Marilyn Brandt, Sophia Costa, Kristin Wilson Grimes

Biology Faculty Works

Blue carbon ecosystems such as mangroves, salt marshes, and seagrass beds are found globally and are fundamental to fisheries production, storm surge protection, and carbon sequestration. The contribution of seagrass ecosystems to global carbon stocks is still not well understood, including in the United States Virgin Islands (USVI). No study has been published to-date assessing the sediment carbon density (SCD) in seagrass beds in the USVI. This study focused on the carbon storage ability of the invasive species, Halophila stipulacea, which is compact in size compared to common native seagrasses and has spread rapidly to become a dominant seagrass in …

Early Season Biomass And Weather Enable Robust Cereal Rye Cover Crop Biomass Predictions, Alexandra M. Huddell, Brian Needleman, Eugene P. Law, Victoria J. Ackroyd, Muthukumar V. Bagavathiannan, Kevin Bradley, Adam S. Davis, Jeffrey A. Evans, Wesley Jay Everman, Michael Flessner, Nicholas Jordan, Lauren M. Schwartz-Lazaro, Ramon G. Leon, John L. Lindquist, Jason K. Norsworthy, Lovreet S. Shergill, Mark Vangessel, Steven B. Mirsky

Department of Agronomy and Horticulture: Faculty Publications

Farmers need accurate estimates of winter cover crop biomass to make informed decisions on termination timing or to estimate potential release of nitrogen from cover crop residues to subsequent cash crops. Utilizing data from an extensive experiment across 11 states from 2016 to 2020, this study explores the most reliable predictors for determining cereal rye cover crop biomass at the time of termination. Our findings demonstrate a strong relationship between early-season and late-season cover crop biomass. Employing a random forest model, we predicted late-season cereal rye biomass with a margin of error of approximately 1,000 kg ha⁻¹ based on …

Gamma Sigma Delta, Nebraska Chapter Newsletter, Issue #63 January 2024

Gamma Sigma Delta, Nebraska Chapter: Newsletters

President's message, Paul E. Read

Gamma Sigma Delta committees 2024

2022 chapter awards: The Honor Society of Agriculture, Gamma Sigma Delta

New members inducted

Annual dues notice, Robert J. Wright, membership Coordinator

Membership list

Membership renewal form

Gamma Sigma Delta, Nebraska Chapter Outstanding Graduate & Undergraduate Student Award Fund

In memoriam: Dennis Lee Kahl (February 8, 1950-August 12, 2020); Col. Warder L. Shires (March 23, 1932-March 6, 2021); Dr. Leland "Lee" Julius Albert Volker (October 24, 1942-March 11, 2022); Richard "Dick" Dam (September 17, 1929-September 17, 2022); John W. Doran (November 12, 1945-November 30, 2022); Donald H. Steinegger (January 1, …

Training The Concept Of Innovate In Dolphins (Tursiops Truncatus) Is Both Creative And Cognitively Stimulating, Deirdre Yeater, Kathleen M. Dudzinski, Dawn Melzer, Andrew R. Magee, Michaela Robinett, Gonzalo Guerra, Kimberly Salazar, Terri Bolton, Heather Manitzas Hill

Psychology Faculty Publications

Creative or novel behaviors in bottlenose dolphins (Tursiops truncatus) can be indicators of flexible thinking and problem solving. Over 50 years ago, two rough-tooth dolphins demonstrated creative novel behaviors acquired through reinforcement training in human care. Since this novel training, a variety of species have been trained to respond to this conceptual cue. The current study assessed the creativity of 12 bottlenose dolphins (5 females, 7 males) housed at the Roatan Institute for Marine Sciences (RIMS) in Roatan, Honduras. Individual differences were found across four constructs measured for creativity: fluency, flexibility, elaboration, and originality. Variability in performance occurred across test …

Alopecia As An Early Clinical Marker For Azathioprine Induced Myelosuppression: A Case Report, Nilanjana Dutta , Final Year Mbbs, Dr. M Suresh Babu , Professor, Dr. Subramanian Ramaswamy , Professor, Dr. Mahabaleshwar Mamadapur , Assistant Professor

Digital Journal of Clinical Medicine

Azathioprine is a pro-drug and is metabolized by the TPMT enzyme in the body. In South Asians, Azathioprine is known to cause alopecia and bone marrow suppression in patients with TPMT enzyme deficiency. In India, the prevalence of TPMT mutation varies from 1.2- 10%. A new mutation was detected in 2014, NUDT15 whose incidence varies from 8.5-16%. Patients with mutation in both TPMT and NUDT15 develop myelosuppression faster. In our case, alopecia manifested as the first clinical feature of Azathioprine myelosuppression. Physicians need to recognize early clinical clues (alopecia) to avoid the impending development of myelosuppression and to look for …

Investigations Of A Nox2 Activator, P47phox, Px Domain Membrane Anchoring Interactions And Inhibition, Angela Develin

Theses and Dissertations

The regulation of cellular signaling across plasma membranes is a well-organized process through cross-talk of biomolecules such as proteins and membranes. Peripheral membrane proteins (PMPs) are a class of water soluble, membrane associated, proteins that play a critical role in transducing such signals. Due to the dynamic nature of their membrane interactions, relatively smooth surfaces, and general lack of deep ligand binding pockets, PMPs are commonly associated with an approximate 85% of the human proteome that is classified as ‘undruggable’ by current drug discovery methodologies. One such PMP, p47^phox, contains a PX domain which is essential in activation …

Dynamic Mathematical Approaches To Understanding Pain In Sickle Cell Disease, Quindel Jones

Theses and Dissertations

In the last 50 years, pain in Sickle Cell Disease (SCD) has become more widely studied thanks to advancements in technology and awareness. Clinical studies, population surveys, pharmaceutical trials, and computational models have been created and conducted to elucidate the mechanisms, treatments, and prediction of Sickle Cell disease pain episodes. Computational models have become quite useful in unraveling disease pathology with the rise in data collection accessibility and advanced computational power. In particular, dynamic mathematical models have been used to investigate Sickle Cell disease pathology and treatment. In this work we conduct a literature review of mathematical models used in …

Investigating The Protein Interactome Of Escherichia Coli To Understand Metabolic Regulation When Proteins Bind: A Systems Biology Study., Shomeek Chowdhury

Theses and Dissertations

Proteins bind other proteins and work together as machines to perform many biological functions. Metabolic enzymes governing the life-sustaining metabolic reactions and therefore, metabolism are proteins which also binds other proteins. In this dissertation work, I have explored proteins when they interact with metabolic enzymes, play any role in regulating the cell’s metabolism. I study this phenomenon in Escherichia coli whose protein-protein interaction data is readily available in public databases with proper reference to the experimental study. Another good reason is the predictions we make in this computational study can be tested and validated in E. coli as it is …

Single-Molecule Pulldown (Simpull) For Detection Of Gpcr Complexes In Mammalian Cells, Julie M. Kraft

Theses and Dissertations

G protein-coupled receptors (GPCRs) constitute the most numerous and diverse superfamily of cell membrane receptors. While GPCRs can perform signal transduction as monomers, evidence suggests they also function as homo- and hetero- dimers and oligomers. These diverse quaternary structures can affect GPCRs’ downstream cellular signaling, pharmacological properties, and regulation of internalization.

The single-molecule pulldown (SiMPull) assay combines a co-immunoprecipitation assay with single-molecule total internal reflection fluorescence (TIRF) microscopy and can be used to probe the stoichiometry of GPCR oligomers in mammalian cells.

This project replicates the SiMPull assay by confirming the quaternary structure of mGluR2 homodimers. Plasmid constructs SNAP-mGluR2-HA and …