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2014

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Articles 7261 - 7290 of 7603

Full-Text Articles in Life Sciences

Drought-Induced Woody Plant Mortality In An Encroached Semi-Arid Savanna Depends On Topoedaphic Factors And Land Management, Dirac L. Twidwell Jr, Carissa L. Wonkka, Charles A. Taylor, Chris B. Zou, Jeremiah J. Twidwell, William E. Rogers Jan 2014

Drought-Induced Woody Plant Mortality In An Encroached Semi-Arid Savanna Depends On Topoedaphic Factors And Land Management, Dirac L. Twidwell Jr, Carissa L. Wonkka, Charles A. Taylor, Chris B. Zou, Jeremiah J. Twidwell, William E. Rogers

Department of Agronomy and Horticulture: Faculty Publications

Questions: How do recent patterns of drought-induced woody plant mortality in Texas semi-arid savanna compare to the extended drought of the 1950s? Does the relative composition of the woody plant community shift ubiquitously across the landscape following woody plant mortality and dieback or are shifts dependent on differences among species, soils, land use and plant demography?

Location: Texas Agrilife Research Station, Sonora, Texas, USA (30.1° N 100.3° W).

Methods: Following an exceptional drought from 1951 to 1957, a study was conducted to quantify rates of mortality for various woody plant species. In 2011, we repeated this study within three long-term …


Switchgrass (Panicum Virgatum L) Flag Leaf Transcriptomes Reveal Molecular Signatures Of Leaf Development, Senescence, And Mineral Dynamics, Nathan A. Palmer, Teresa Donze-Reiner, David Horvath, Tiffany Heng-Moss, Brian M. Waters, Christian M. Tobias, Gautam Sarath Jan 2014

Switchgrass (Panicum Virgatum L) Flag Leaf Transcriptomes Reveal Molecular Signatures Of Leaf Development, Senescence, And Mineral Dynamics, Nathan A. Palmer, Teresa Donze-Reiner, David Horvath, Tiffany Heng-Moss, Brian M. Waters, Christian M. Tobias, Gautam Sarath

Department of Agronomy and Horticulture: Faculty Publications

Switchgrass flag leaves can be expected to be a source of carbon to the plant, and its senescence is likely to impact the remobilization of nutrients from the shoots to the rhizomes. However, many genes have not been assigned a function in specific stages of leaf development. Here, we characterized gene expression in flag leaves over their development. By merging changes in leaf chlorophyll and the expression of genes for chlorophyll biosynthesis and degradation, a four-phase molecular roadmap for switchgrass flag leaf ontogeny was developed. Genes associated with early leaf development were up-regulated in phase 1. Phase 2 leaves had …


Comparison Of Winter Strawberry Production In A Commercial Heated High Tunnel Versus A University Greenhouse, Ellen T. Paparozzi, Ryan Pekarek, George E. Meyer, Stacy A. Adams, M. Elizabeth Conley, David P. Lambe, Paul Read, Erin E. Blankenship Jan 2014

Comparison Of Winter Strawberry Production In A Commercial Heated High Tunnel Versus A University Greenhouse, Ellen T. Paparozzi, Ryan Pekarek, George E. Meyer, Stacy A. Adams, M. Elizabeth Conley, David P. Lambe, Paul Read, Erin E. Blankenship

Department of Agronomy and Horticulture: Faculty Publications

For the past 4 years, the University of Nebraska strawberry team has worked to develop low cost, sustainable methods for farmers and growers to produce strawberries in a double polyethylene greenhouse during the winter. This past year, this growing system was adapted to become a commercial grower’s heated high tunnel for the winter/spring of 2013-14. The idea was to scale up to a farm-size demonstration and compare it to the university greenhouse production system with a goal to expand marketing opportunities for strawberries into the winter season.


Fate Of C And N From Dung Pats Into Soil, Kenneth Evans, Ana Wingeyer, Martha Mamo, Pamela Sutton, Jeff Bradshaw, Kent M. Eskridge, Matt Judkins, Jenna Beckmann, Erin Hatch Jan 2014

Fate Of C And N From Dung Pats Into Soil, Kenneth Evans, Ana Wingeyer, Martha Mamo, Pamela Sutton, Jeff Bradshaw, Kent M. Eskridge, Matt Judkins, Jenna Beckmann, Erin Hatch

Department of Agronomy and Horticulture: Faculty Publications

No abstract provided.


Greenhouse Gas Emissions From Soil Treated With Dung Pats, Kenneth Evans, Ana Wingeyer, Martha Mamo, Walter H. Schacht, Pamela Sutton, Kent M. Eskridge Jan 2014

Greenhouse Gas Emissions From Soil Treated With Dung Pats, Kenneth Evans, Ana Wingeyer, Martha Mamo, Walter H. Schacht, Pamela Sutton, Kent M. Eskridge

Department of Agronomy and Horticulture: Faculty Publications

No abstract provided.


Concordant Phylogenetic Patterns Inferred From Mitochondrial And Microsatellite Dna In The Giant Clam Tridacna Crocea, Timery S. Deboer, Ma Rio Abdon Naguit, Mark V. Erdmann, Maria Carmen A. Ablan-Lagman, Ambariyanto, Kent E. Carpenter, Abdul Hamid A. Toba, Paul H. Barber Jan 2014

Concordant Phylogenetic Patterns Inferred From Mitochondrial And Microsatellite Dna In The Giant Clam Tridacna Crocea, Timery S. Deboer, Ma Rio Abdon Naguit, Mark V. Erdmann, Maria Carmen A. Ablan-Lagman, Ambariyanto, Kent E. Carpenter, Abdul Hamid A. Toba, Paul H. Barber

Biological Sciences Faculty Publications

The boring giant clam, Tridacna crocea Lamarck, 1819, is a CITES-listed bivalve that is declining due to overharvest and environmental degradation. Previous molecular studies in the Coral Triangle using mitochondrial DNA indicated the presence of deep phylogenetic divergence and strong phylogeographic structure across this region, suggesting the possibility of multiple cryptic species. In the present study, we compare data from non-recombining mitochondrial (mtDNA; cytochrome oxidase subunit 1, COI) and eight microsatellite loci to better understand patterns of genetic structure and species boundaries in T. crocea populations across Indonesia and the Philippines. Microsatellite loci and mtDNA data from 618 individuals representing …


Developing Important Marine Mammal Area Criteria: Learning From Ecologically Or Biologically Significant Areas And Key Biodiversity Areas, Collenn M. Corrigan, Jeff A. Ardron, Mia T. Comeros-Raynal, Erich Hoyt, Giuseppe Notarbartolo Di Sciara, Kent E. Carpenter Jan 2014

Developing Important Marine Mammal Area Criteria: Learning From Ecologically Or Biologically Significant Areas And Key Biodiversity Areas, Collenn M. Corrigan, Jeff A. Ardron, Mia T. Comeros-Raynal, Erich Hoyt, Giuseppe Notarbartolo Di Sciara, Kent E. Carpenter

Biological Sciences Faculty Publications

1. This paper explores how criteria to identify important marine mammal areas (IMMAs) could be developed, and nested in existing global criteria. This process would consider 134 species of marine mammals. 2. Particular attention is given to two suites of global criteria to identify areas important for the persistence of marine biodiversity: Ecologically or Biologically Significant Areas (EBSAs) developed through the Convention on Biological Diversity (CBD), and Key Biodiversity Areas (KBAs) in revision through the International Union for the Conservation of Nature (IUCN). They are seen as mutually complementary in the development of IMMAs. 3. The specificities necessary for identifying …


Ehrlichia And Spotted Fever Group Rickettsiae Surveillance In Amblyomma Americanum In Virginia Through Use Of A Novel Six-Plex Real-Time Pcr Assay, David N. Gaines, Darwin J. Operario, Suzanne Stroup, Ellen Stromdahl, Chelsea Wright, Holly Gaff, James Broyhill, Joshua Smith, Douglas E. Norris, Tyler Henning, Agape Lucas, Eric Houpt Jan 2014

Ehrlichia And Spotted Fever Group Rickettsiae Surveillance In Amblyomma Americanum In Virginia Through Use Of A Novel Six-Plex Real-Time Pcr Assay, David N. Gaines, Darwin J. Operario, Suzanne Stroup, Ellen Stromdahl, Chelsea Wright, Holly Gaff, James Broyhill, Joshua Smith, Douglas E. Norris, Tyler Henning, Agape Lucas, Eric Houpt

Biological Sciences Faculty Publications

The population of the lone star tick Amblyomma americanum has expanded in North America over the last several decades. It is known to be an aggressive and nondiscriminatory biter and is by far the most common human-biting tick encountered in Virginia. Few studies of human pathogen prevalence in ticks have been conducted in our state since the mid-twentieth century. We developed a six-plex real-time PCR assay to detect three Ehrlichia species (E. chaffeensis, E. ewingii, and Panola Mountain Ehrlichia) and three spotted fever group Rickettsiae (SFGR; R. amblyommii, R. parkeri, and R. rickettsii …


Prevalence Of Ehrlichia Chaffeensis And Ehrlichia Ewingii In Amblyomma Americanum And Dermacentor Variabilis Collected From Southeastern Virginia, 2010-2011, Chelsea L. Wright, Holly D. Gaff, Wayne L. Hynes Jan 2014

Prevalence Of Ehrlichia Chaffeensis And Ehrlichia Ewingii In Amblyomma Americanum And Dermacentor Variabilis Collected From Southeastern Virginia, 2010-2011, Chelsea L. Wright, Holly D. Gaff, Wayne L. Hynes

Biological Sciences Faculty Publications

Amblyomma americanum is the most commonly-encountered tick species in southeastern Virginia, representing approximately 95% of the human-biting tick population in this area. Here we investigated the prevalence of Ehrlichia chaffeensis and Ehrlichia ewingii in questing Amblyomma americanum and Dermacentor variabilis ticks collected from multiple sites in southeastern Virginia from 2010–2011. Although both Ehrlichia species were detected in Amblyomma americanum, no evidence of either pathogen was found in Dermacentor variabilis. Prevalence of E. chaffeensis varied by location, ranging from 0 – 5.08% among Amblyomma americanum populations. Ehrlichia ewingii prevalence was slightly higher, ranging from 0 – 8.20% among A. …


Single-Tube Real-Time Pcr Assay For Differentiation Of Ixodes Affinis And Ixodes Scapularis, Chelsea L. Wright, Wayne L. Hynes, Breanna T. White, Mindy N. Marshall, Holly D. Gaff, David T. Gauthier Jan 2014

Single-Tube Real-Time Pcr Assay For Differentiation Of Ixodes Affinis And Ixodes Scapularis, Chelsea L. Wright, Wayne L. Hynes, Breanna T. White, Mindy N. Marshall, Holly D. Gaff, David T. Gauthier

Biological Sciences Faculty Publications

Ixodes affinis Neumann (1899) and Ixodes scapularis Say (1821) are tick vectors of the etiologic agent of Lyme disease, Borrelia burgdorferi sensu stricto. Ixodes affinis and I. scapularis are morphologically very similar, and as they are sympatric in the mid- and south-Atlantic U.S. coastal states, their accurate identification is crucial to studies of disease and vector ecology in this area. This work describes a rapid, single-tube SYBR® Green-based real-time PCR assay for differentiation of I. affinis and I. scapularis at all life stages. The assay employs 2 pairs of species specific primers directed against the internal transcribed spacer 2 (ITS2) …


Ticks And Spotted Fever Group Rickettsiae Of Southeastern Virginia, Robyn M. Nadolny, Chelsea L. Wright, Daniel E. Sonenshine, Wayne L. Hynes, Holly D. Gaff Jan 2014

Ticks And Spotted Fever Group Rickettsiae Of Southeastern Virginia, Robyn M. Nadolny, Chelsea L. Wright, Daniel E. Sonenshine, Wayne L. Hynes, Holly D. Gaff

Biological Sciences Faculty Publications

The incidence of tick-borne rickettsial disease in the southeastern United States has been rising steadily through the past decade, and the range expansions of tick species and tick-borne infectious agents, new and old, has resulted in an unprecedented mix of vectors and pathogens. The results of an ongoing 4-year surveillance project describe the relative abundance of questing tick populations in southeastern Virginia. Since 2009, more than 66,000 questing ticks of 7 species have been collected from vegetation in a variety of habitats, with Amblyomma americanum constituting over 95% of ticks collected. Other species represented included Ixodes scapularis, Dermacentor variabilis …


Phylogeography Unplugged: Comparative Surveys In The Genomic Era, Brian W. Bowen, Kartik Shanker, Nina Yasuda, Maria Celia Malay, Sophie Von Der Heyden, Gustav Paulay, Luiz A. Rocha, Kimberly A. Selkoe, Paul H. Barber, Suzanne T. Williams, Harilaos A. Lessios, Eric D. Crandall, Giacomo Bernardi, Christopher P. Meyer, Kent E. Carpenter, Robert J. Toonen Jan 2014

Phylogeography Unplugged: Comparative Surveys In The Genomic Era, Brian W. Bowen, Kartik Shanker, Nina Yasuda, Maria Celia Malay, Sophie Von Der Heyden, Gustav Paulay, Luiz A. Rocha, Kimberly A. Selkoe, Paul H. Barber, Suzanne T. Williams, Harilaos A. Lessios, Eric D. Crandall, Giacomo Bernardi, Christopher P. Meyer, Kent E. Carpenter, Robert J. Toonen

Biological Sciences Faculty Publications

In March 2012, the authors met at the National Evolutionary Synthesis Center (NESCent) in Durham, North Carolina, USA, to discuss approaches and cooperative ventures in Indo-Pacific phylogeography. The group emerged with a series of findings: (1) Marine population structure is complex, but single locus mtDNA studies continue to provide powerful first assessment of phylogeographic patterns. (2) These patterns gain greater significance/power when resolved in a diversity of taxa. New analytical tools are emerging to address these analyses with multi-taxon approaches. (3) Genome-wide analyses are warranted if selection is indicated by surveys of standard markers. Such indicators can include discordance between …


Basin Isolation And Oceanographic Features Influencing Lineage Divergence In The Humbug Damselfish (Dascyllus Aruanus) In The Coral Triangle, J. M. Raynal, E. D. Crandall, P. H. Barber, G. N. Mahardika, M. C. Lagman, Kent E. Carpenter Jan 2014

Basin Isolation And Oceanographic Features Influencing Lineage Divergence In The Humbug Damselfish (Dascyllus Aruanus) In The Coral Triangle, J. M. Raynal, E. D. Crandall, P. H. Barber, G. N. Mahardika, M. C. Lagman, Kent E. Carpenter

Biological Sciences Faculty Publications

The Coral Triangle is a hotspot for marine species diversity as well as for intraspecific genetic diversity. Here, we used nuclear RAG2 and mitochondrial D-Loop genes to identify deep genetic divergence among Dascyllus aruanus (Linnaeus, 1758) populations across relatively short scales within the Coral Triangle. Mitochondrial clades different by >20 mutational steps were completely isolated from one another across the distance between Java and the Lesser Sunda Islands, and also showed frequency differences in the eastern and western Philippines. Evidence for population structure in the Sulu Sea and at the Lesser Sunda Islands was also identified. Our results suggest that …


Comparison Of Phenology And Pathogen Prevalence, Including Infection With The Ehrlichia Muris-Like (Eml) Agent, Of Ixodes Scapularis Removed From Soldiers In The Midwestern And Northeastern United States Over A 15 Year Period (1997-2012), Ellen Stromdahl, Sarah Hamer, Sarah Jenkins, Lynne Sloan, Phillip Williamson, Erik Foster, Robyn Nadolny, Chad Elkins, Mary Vince, Bobbi Pritt Jan 2014

Comparison Of Phenology And Pathogen Prevalence, Including Infection With The Ehrlichia Muris-Like (Eml) Agent, Of Ixodes Scapularis Removed From Soldiers In The Midwestern And Northeastern United States Over A 15 Year Period (1997-2012), Ellen Stromdahl, Sarah Hamer, Sarah Jenkins, Lynne Sloan, Phillip Williamson, Erik Foster, Robyn Nadolny, Chad Elkins, Mary Vince, Bobbi Pritt

Biological Sciences Faculty Publications

Background: Since 1997, human-biting ticks submitted to the Department of Defense Human Tick Test Kit Program (HTTKP) of the US Army Public Health Command have been tested for pathogens by PCR. We noted differences in the phenology and infection prevalence among Ixodes scapularis ticks submitted from military installations in different geographic regions. The aim of this study was to characterize these observed differences, comparing the phenology and pathogen infection rates of I. scapularis submitted from soldiers at two sites in the upper Midwest ( Camp Ripley, MN, and Ft. McCoy, WI) and one site in the northeastern US (Ft. Indiantown …


Emergence Of Algal Blooms: The Effects Of Short-Term Variability In Water Quality On Phytoplankton Abundance, Diversity, And Community Composition In A Tidal Estuary, Todd A. Egerton, Ryan E. Morse, Harold G. Marshall, Margaret R. Mulholland Jan 2014

Emergence Of Algal Blooms: The Effects Of Short-Term Variability In Water Quality On Phytoplankton Abundance, Diversity, And Community Composition In A Tidal Estuary, Todd A. Egerton, Ryan E. Morse, Harold G. Marshall, Margaret R. Mulholland

OES Faculty Publications

Algal blooms are dynamic phenomena, often attributed to environmental parameters that vary on short timescales (e.g., hours to days). Phytoplankton monitoring programs are largely designed to examine long-term trends and interannual variability. In order to better understand and evaluate the relationships between water quality variables and the genesis of algal blooms, daily samples were collected over a 34 day period in the eutrophic Lafayette River, a tidal tributary within Chesapeake Bay's estuarine complex, during spring 2006. During this period two distinct algal blooms occurred; the first was a cryptomonad bloom and this was followed by a bloom of the mixotrophic …


Phytoplankton And Nutrient Dynamics In A Tidally Dominated Eutrophic Estuary: Daily Variability And Controls On Bloom Formation, Ryan E. Morse, Margaret R. Mulholland, Todd A. Egerton, Harold G. Marshall Jan 2014

Phytoplankton And Nutrient Dynamics In A Tidally Dominated Eutrophic Estuary: Daily Variability And Controls On Bloom Formation, Ryan E. Morse, Margaret R. Mulholland, Todd A. Egerton, Harold G. Marshall

OES Faculty Publications

To better understand nutrient dynamics and factors that promote the initiation of algal blooms, the Lafayette River, a tidal subestuary of Chesapeake Bay that experiences seasonal algal blooms, was sampled daily for a period of 54 d in the fall of 2005. Three phytoplankton blooms (chl a concentrations exceeding twice the average of monthly measurements from 2000 to 2009) occurred during this period: a mixed bloom of Akashiwo sanguinea and Gymnodinium sp., a monospecific Skeletonema costatum bloom, and a monospecific Gymnodinium sp. bloom. Over the sampling period, nutrient concentrations increased following precipitation events and were elevated between bloom periods but …


Reproductive Phase Determination In Male Meagre (Argyrosomus Regius, Sciaenidae): Testis Development And Histologic Corroboration Of A Gross Anatomical Scale, Nuno Prista, Leonel Gordo, José Lino Costa, Maria José Costa, Cynthia Jones Jan 2014

Reproductive Phase Determination In Male Meagre (Argyrosomus Regius, Sciaenidae): Testis Development And Histologic Corroboration Of A Gross Anatomical Scale, Nuno Prista, Leonel Gordo, José Lino Costa, Maria José Costa, Cynthia Jones

OES Faculty Publications

Reproductive stage determination of male gonads has received sparse attention in fish biology literature with few studies detailing the building of gross anatomical- and histologic scales. The meagre (Argyrosomus regius) is one of the world's largest sciaenids and supports a significant regional fishery in European and North African waters whose reproductive patterns are yet to be fully investigated. In the present study, we derive a macroscopic grading system for meagre testis using semi-quantitative graphs that feature the testis variability along the species size range and time of the year. We then describe the histological stages and reproductive phases of male …


Reproductive Phase Determination In Male Meagre (Argyrosomus Regius, Sciaenidae): Testis Development And Histologic Corroboration Of A Gross Anatomical Scale, Nuno Prista, Leonel Gordo, Jose L. Costa, Maria J. Costa, Cynthia M. Jones Jan 2014

Reproductive Phase Determination In Male Meagre (Argyrosomus Regius, Sciaenidae): Testis Development And Histologic Corroboration Of A Gross Anatomical Scale, Nuno Prista, Leonel Gordo, Jose L. Costa, Maria J. Costa, Cynthia M. Jones

OES Faculty Publications

Reproductive stage determination of male gonads has received sparse attention in fish biology literature with few studies detailing the building of gross anatomical-and histologic scales. The meagre (Argyrosomus regius) is one of the world's largest sciaenids and supports a significant regional fishery in European and North African waters whose reproductive patterns are yet to be fully investigated. In the present study, we derive a macroscopic grading system for meagre testis using semi-quantitative graphs that feature the testis variability along the species size range and time of the year. We then describe the histological stages and reproductive phases of …


A Loose Domain Swapping Organization Confers A Remarkable Stability To The Dimeric Structure Of The Arginine Binding Protein From Thermotoga Maritima, Alessia Ruggiero, Jonathan D. Dattelbaum, Maria Staiano, Rita Berisio, Sabato D'Auria, Luigi Vitagliano Jan 2014

A Loose Domain Swapping Organization Confers A Remarkable Stability To The Dimeric Structure Of The Arginine Binding Protein From Thermotoga Maritima, Alessia Ruggiero, Jonathan D. Dattelbaum, Maria Staiano, Rita Berisio, Sabato D'Auria, Luigi Vitagliano

Chemistry Faculty Publications

The arginine binding protein from Thermatoga maritima (TmArgBP), a substrate binding protein (SBP) involved in the ABC system of solute transport, presents a number of remarkable properties. These include an extraordinary stability to temperature and chemical denaturants and the tendency to form multimeric structures, an uncommon feature among SBPs involved in solute transport. Here we report a biophysical and structural characterization of the TmArgBP dimer. Our data indicate that the dimer of the protein is endowed with a remarkable stability since its full dissociation requires high temperature as well as SDS and urea at high concentrations. In order to elucidate …


Arabidopsis Msl10 Has A Regulated Cell Death Signaling Activity That Is Separable From Its Mechanosensitive Ion Channel Activity, Kira M. Veley, Grigory Maksaev, Elizabeth M. Frick, Emma January, Sarah C. Kloepper, Elizabeth S. Haswell Jan 2014

Arabidopsis Msl10 Has A Regulated Cell Death Signaling Activity That Is Separable From Its Mechanosensitive Ion Channel Activity, Kira M. Veley, Grigory Maksaev, Elizabeth M. Frick, Emma January, Sarah C. Kloepper, Elizabeth S. Haswell

Biology Faculty Research

Members of the MscS superfamily of mechanosensitive ion channels function as osmotic safety valves, releasing osmolytes under increased membrane tension. MscS homologs exhibit diverse topology and domain structure, and it has been proposed that the more complex members of the family might have novel regulatory mechanisms or molecular functions. Here, we present a study of MscS-Like (MSL)10 from Arabidopsis thaliana that supports these ideas. High-level expression of MSL10-GFP in Arabidopsis induced small stature, hydrogen peroxide accumulation, ectopic cell death, and reactive oxygen species- and cell death-associated gene expression. Phosphomimetic mutations in the MSL10 N-terminal domain prevented these phenotypes. The phosphorylation …


Effect Of Body Mass Index On Post-Exercise Hemodynamic Responses, Stephanie M. Moore Jan 2014

Effect Of Body Mass Index On Post-Exercise Hemodynamic Responses, Stephanie M. Moore

Theses and Dissertations--Kinesiology and Health Promotion

To assess the relationships of body mass index (BMI) on arterial stiffness at rest and post-maximal treadmill graded exercise testing (GXT).

Forty-four apparently healthy, young adult males (22.1 ± 0.48 years) were recruited and divided into either a healthy weight (H, ≤24.9 kg/m2), overweight (OV, 24.9-29.9 kg/m2) or obese (OB, ≥29.9 kg/m2) group based on BMI. All subjects underwent arterial stiffness (carotid-femoral pulse wave velocity, cfPWV), blood pressure (BP), pulse pressure (PP), mean arterial pressure (MAP) and body composition (bioelectrical impedance analysis, BIA) measurements at rest. Following the GXT, measures of arterial stiffness (cfPWV) …


Painted Redstarts In South Texas, 2013-2014, Timothy Brush Jan 2014

Painted Redstarts In South Texas, 2013-2014, Timothy Brush

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

No abstract provided.


Changes In Fish Populations In The Lower Canyons Of The Rio Grande, Gary P. Garrett, Robert Edwards Jan 2014

Changes In Fish Populations In The Lower Canyons Of The Rio Grande, Gary P. Garrett, Robert Edwards

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

The Lower Canyons of the Rio Grande suffer from environmental degradation that has negatively impacted native fish populations and their distributions. Macrhybopsis aestivalis (speckled chub), Notropis jemezanus (Rio Grande shiner), Rhinichthys cataractae (longnose dace) and Cycleptus elongatus (blue sucker) populations appear to have suffered recent declines. Although diminished water quantity is likely an important factor in these declines, related changes in channel morphology precipitated by massive stands of Arundo donax (giant reed) and Tamarix sp. (salt cedar) may also be responsible. These invasive exotics have essentially channelized the river, disrupted normal sediment distribution and reduced shallow, low-velocity habitats. Much of …


Training Strategies And Movement Assessments In Athletes And Non-Athletes, Matthew David Lewis Jan 2014

Training Strategies And Movement Assessments In Athletes And Non-Athletes, Matthew David Lewis

Theses and Dissertations--Kinesiology and Health Promotion

This dissertation is composed of three manuscripts based on two studies related to training and assessment methods used to evaluate change and overall quality in measures of performance, postural control, and functional movement. Study one evaluated the effect of sand training on athletic performance and postural control. Study two investigated the effect of scoring strata of the deep squat (DS) component of the Functional Movement Screen (FMS) on the weight-bearing lunge test (WBLT), Star Excursion Balance Test (SEBT), and Lateral Flexion Test (LFT) in 101 male and female college students.

Study one results included significant overall improvements of the five …


Valorisation Of The Cider And Brewing Industry By-Products As Nutraceutical Ingredients, Sofia Reis Jan 2014

Valorisation Of The Cider And Brewing Industry By-Products As Nutraceutical Ingredients, Sofia Reis

Doctoral

By-products from the cider and brewing industries, including apple pomace (AP) and brewer’s spent grain (BSG) respectively, constitute major environmental problems due to the large quantities produced every year. They are sources of valuable compounds such as protein, fibre, essential fatty acids, phenolic compounds and minerals, some of them with antioxidant and prebiotic properties. Their high nutritional value leads to their potential use as human food products and several applications have been considered recently. The aims of this work include i) the nutritional and compositional characterisation of AP, BSG and final extruded and baked prototypes containing these by-products and ii) …


A Central Support System Can Facilitate Implementation And Sustainability Of A Classroom-Based Undergraduate Research Experience (Cure) In Genomics, Jeremy Buhler, Elaine Mardis, Wilson Leung, Christopher Shaffer, Jennifer Threlfall, Sarah C.R. Elgin, David Lopatto, Charles Hauser, Christopher Jones, Don Paetkau, Vidya Chandrasekaran, David Dunbar, Christy Mackinnon, Joyce Stamm, Consuelo Alvarez, Daron Barnard, James Bedard, April Bednarski, Satish Bhalla, John Braverman, Martin Burg, Hui-Min Chung, Randall Dejong, Justin Diangelo, Chunguang Du, Todd Eckdahl, Julia Emerson, Amy Frary, Donald Frohlich, Anya Goodman, Yuying Gosser, Shubha Govind, Adam Haberman, Amy Hark, Arlene Hoogewerf, Diana Johnson, Lisa Kadlec, Marian Kaehler, Catherine Silver-Key, Nighat Kokan, Olga Kopp, Gary Kuleck, Jane Lopilato, Juan Martinez-Cruzado, Gerard Mcneil, Stephanie Mel, Alexis Nagengast, Paul Overvoorde, Susan Parrish, Mary Preuss, Laura Reed, Gloria Regisford, Dennis Revie, Srebrenka Robic, Jennifer Roecklien-Canfield, Anne Rosenwald, Michael Rubin, Kenneth Saville, Stephanie Schroeder, Karim Sharif, Mary Shaw, Gary Skuse, Christopher Smith, Mary Smith, Sheryl Smith, Eric Spana, Mary Spratt, Aparna Sreenivasan, Jeffrey Thompson, Matthew Wawersik, Michael Wolyniak, James Youngblom, Leming Zhou Jan 2014

A Central Support System Can Facilitate Implementation And Sustainability Of A Classroom-Based Undergraduate Research Experience (Cure) In Genomics, Jeremy Buhler, Elaine Mardis, Wilson Leung, Christopher Shaffer, Jennifer Threlfall, Sarah C.R. Elgin, David Lopatto, Charles Hauser, Christopher Jones, Don Paetkau, Vidya Chandrasekaran, David Dunbar, Christy Mackinnon, Joyce Stamm, Consuelo Alvarez, Daron Barnard, James Bedard, April Bednarski, Satish Bhalla, John Braverman, Martin Burg, Hui-Min Chung, Randall Dejong, Justin Diangelo, Chunguang Du, Todd Eckdahl, Julia Emerson, Amy Frary, Donald Frohlich, Anya Goodman, Yuying Gosser, Shubha Govind, Adam Haberman, Amy Hark, Arlene Hoogewerf, Diana Johnson, Lisa Kadlec, Marian Kaehler, Catherine Silver-Key, Nighat Kokan, Olga Kopp, Gary Kuleck, Jane Lopilato, Juan Martinez-Cruzado, Gerard Mcneil, Stephanie Mel, Alexis Nagengast, Paul Overvoorde, Susan Parrish, Mary Preuss, Laura Reed, Gloria Regisford, Dennis Revie, Srebrenka Robic, Jennifer Roecklien-Canfield, Anne Rosenwald, Michael Rubin, Kenneth Saville, Stephanie Schroeder, Karim Sharif, Mary Shaw, Gary Skuse, Christopher Smith, Mary Smith, Sheryl Smith, Eric Spana, Mary Spratt, Aparna Sreenivasan, Jeffrey Thompson, Matthew Wawersik, Michael Wolyniak, James Youngblom, Leming Zhou

Biology Faculty Research

In their 2012 report, the President's Council of Advisors on Science and Technology advocated "replacing standard science laboratory courses with discovery-based research courses"-a challenging proposition that presents practical and pedagogical difficulties. In this paper, we describe our collective experiences working with the Genomics Education Partnership, a nationwide faculty consortium that aims to provide undergraduates with a research experience in genomics through a scheduled course (a classroom-based undergraduate research experience, or CURE). We examine the common barriers encountered in implementing a CURE, program elements of most value to faculty, ways in which a shared core support system can help, and the …


Another Look At The Root Of The Angiosperms Reveals A Familiar Tale, Bryan T. Drew, Brad R. Ruhfel, Stephen A. Smith, Michael J. Moore, Barbara G. Briggs, Matthew A. Gitzendanner, Pamela S. Soltis, Douglas E. Soltis Jan 2014

Another Look At The Root Of The Angiosperms Reveals A Familiar Tale, Bryan T. Drew, Brad R. Ruhfel, Stephen A. Smith, Michael J. Moore, Barbara G. Briggs, Matthew A. Gitzendanner, Pamela S. Soltis, Douglas E. Soltis

Faculty & Staff Scholarship

Since the advent of molecular phylogenetics more than 25 years ago, a major goal of plant systematists has been to discern the root of the angiosperms. While most studies indicate that Amborella trichopoda is sister to all remaining extant flowering plants, support for this position has varied with respect to both the sequence data sets and analyses employed. Recently, Goremykin et al. (2013) questioned the “Amborella-sister hypothesis” using a “noise-reduction” approach and reported a topology with Amborella + Nymphaeales (water lilies) sister to all remaining angiosperms. Through a series of analyses of both plastid genomes and mitochondrial genes, we continue …


Prevalence And Prevention Of The Female Athlete Triad, Elizabeth Dachenhaus Jan 2014

Prevalence And Prevention Of The Female Athlete Triad, Elizabeth Dachenhaus

Honors Projects

A study was composed to analyze the three components of the female athlete triad: disordered eating, amenorrhea, and osteoporosis. The cyclic behavior of these three components and determination of which of the pillars of the triad is the most dangerous was also focused on. In order to test the prevalence of disordered eating among women’s collegiate teams, a brief survey was distributed and analyzed among athletes at Bowling Green State University. In addition to confirming that women in aesthetic sports experience a greater amount of disordered eating on the team, the survey also identified women that participated in sports perceived …


Pcb Effects On Development Of Behavior In Rats, Robert Witte Jan 2014

Pcb Effects On Development Of Behavior In Rats, Robert Witte

Honors Projects

Abstract

PCBs were originally used as industrial chemicals in many devices and applications, including electrical capacitors and transformers, lubricants, and sealants in buildings. PCBs have been investigated and their use has been slowly phased out starting in the U.S. in the 1970s. A worldwide ban was put on the use and manufacturing of PCB in 2001, however they remain in the food chain because of their lipophilic properties and their long half-life. Major sources of PCB include wild-life, fish, and other seafood. Individuals exposed to PCB during development can experience negative effects on neurobiological, cognitive, and behavior functioning in both …


The Effects That Liquid And Solid Cattle Manure Have On The Water Quality Of Drainage Ditches In Putnam County, Ohio, Janelle Horstman Jan 2014

The Effects That Liquid And Solid Cattle Manure Have On The Water Quality Of Drainage Ditches In Putnam County, Ohio, Janelle Horstman

Honors Projects

Lake Erie has experienced harmful algal blooms with increased frequency since the mid-1990s due to excess nutrients from Rivers, such as the Maumee River, and largely agricultural watersheds. Nonpoint source pollution from agriculture contributes to eutrophication, algal blooms, and the degradation of water quality. This creates stress on aquatic fauna, reduced aesthetic quality, odor, and limits of the water for usage of drinking, recreation, and industry. This research paper asks what the contributions of having access to manure application records, soil records, and information about antibiotics have on what is known about manure management and antibiotic resistance, which has been …