Life Sciences Commons^™

The Zambia Children's Ks-Hhv8 Study: Rationale, Study Design, And Study Methods, Veenu Minhas, Kay L. Crabtree, Ann Chao, Janet M. Wojcicki, Adrian M. Sifuniso, Catherine Nkonde, Chipepo Kankasa, Charles D. Mitchell, Charles Wood

Nebraska Center for Virology: Faculty Publications

The epidemic of human immunodeficiency virus in Zambia has led to a dramatic rise in the incidence of human herpesvirus-8 (HHV-8)–associated Kaposi's sarcoma in both adults and children. However, there is a paucity of knowledge about the routes of HHV-8 transmission to young children. The Zambia Children's KS-HHV8 Study, a large, prospective cohort study in Lusaka, Zambia, was launched in 2004 to investigate the role of household members as a source of HHV-8 infection in young children and social behaviors that may modify the risk of HHV-8 acquisition. This cohort is distinct from other epidemiologic studies designed to investigate HHV-8 …

Tca Cycle Inactivation In Staphylococcus Aureus Alters Nitric Oxide Production In Raw 264.7 Cells, Chandirasegaran Massilamany, Arunakumar Gangaplara, Donald J. Gardner, James M. Musser, David J. Steffen, Greg A. Somerville, Jay Reddy

Jay Reddy Publications

Inactivation of the Staphylococcus aureus tricarboxylic acid (TCA) cycle delays the resolution of cutaneous ulcers in a mouse soft tissue infection model. In this study, it was observed that cutaneous lesions in mice infected with wild-type or isogenic aconitase mutant S. aureus strains contained comparable inflammatory infiltrates, suggesting the delayed resolution was independent of the recruitment of immune cells. These observations led us to hypothesize that staphylococcal metabolism can modulate the host immune response. Using an in vitro model system involving RAW 264.7 cells, the authors observed that cells cultured with S. aureus aconitase mutant strains produced significantly lower amounts …

Gender Differences In Cns Autoimmunity Induced By Mimicry Epitope For Plp 139–151 In Sjl Mice, Chandirasegara Massilamany, Sivasubramani Thulasingam, David Steffen, Jay Reddy

Jay Reddy Publications

Development of multiple sclerosis (MS) is more prevalent in females than in males, but the underlying mechanisms are not clear. Microbial infections have been suspected as triggers of MS and it is not known whether gender differences in reactivity to environmental antigens contribute to the disease pathogenesis. We demonstrated that ACA 83–95, a mimicry epitope from Acanthamoeba castellanii for proteolipid protein (PLP) 139–151, induces clinical signs of encephalomyelitis in both male and female SJL mice. Conversely ACA 83–95-induced effector cells from males fail to induce disease in female mice. Although we found no gender differences in the frequencies of antigen-specific …

Antibody Recognition Of Porcine Circovirus Type 2 Capsid Protein Epitopes After Vaccination, Infection, And Disease, Benjamin R. Trible, Maureen Kerrigan, Nicholas Crossland, Megan Potter, Kay Faaberg, Richard Hesse, Raymond R. R. Rowland

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Open reading frame 2 (ORF2) of porcine circovirus type 2 (PCV2) codes for the 233-amino-acid capsid protein (CP). Baculovirus-based vaccines that express only ORF2 are protective against clinical disease following experimental challenge or natural infection. The goal of this study was to identify regions in CP preferentially recognized by sera from experimentally infected and vaccinated pigs and to compare these responses to those of pigs diagnosed with porcine circovirus-associated disease (PCVAD), including porcine multisystemic wasting syndrome (PMWS) and porcine dermatitis and nephropathy syndrome (PDNS). The approach was to react porcine sera with CP polypeptide fragments followed by finer mapping studies …

Conventional And Glyphosate-Resistant Maize Yields Across Plant Densities In Single- And Twin-Row Configurations, Kipling S. Balkcom, Jason L. Satterwhite, Francisco J. Arriaga, Andrew J. Price, Edzard Van Santen

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Maize (Zea mays L.) produced in narrow rows can increase yields and accelerate canopy closure. Costly equipment modifications make narrow rows impractical, but a twin-row configuration may boost production with fewer equipment modifications. Four field experiments were conducted to measure weed biomass, leaf area index (LAI), and yield for a conventional (CN) and a glyphosate-resistant (GR) hybrid across three plant densities (low 4.0–4.4 plants m⁻²; medium 5.9–6.4 plants m⁻²; and high 7.9–8.4 plants m⁻²) and two row configurations (single vs. twin) in a conservation tillage system during the 2005 growing season. The experimental design …

Rnai Screening Reveals Requirement For Host Cell Secretory Pathway In Infection By Diverse Families Of Negative-Strand Rna Viruses, Debasis Panda, Anshuman Das, Phat X. Dinh, Sakthivel Subramaniam, Debasis Nayak, Nicholas J. Barrows, James L. Pearson, Jesse Thompson, David L. Kelly, Istvan Ladunga, Asit K. Pattnaik

School of Veterinary and Biomedical Sciences: Faculty Publications

Negative-strand (NS) RNA viruses comprise many pathogens that cause serious diseases in humans and animals. Despite their clinical importance, little is known about the host factors required for their infection. Using vesicular stomatitis virus (VSV), a prototypic NS RNA virus in the family Rhabdoviridae, we conducted a human genomewide siRNA screen and identified 72 host genes required for viral infection. Many of these identified genes were also required for infection by two other NS RNA viruses, the lymphocytic choriomeningitis virus of the Arenaviridae family and human parainfluenza virus type 3 of the Paramyxoviridae family. Genes affecting different stages of …

Comparison Of Adenoviruses As Oncolytics And Cancer Vaccines In An Immunocompetent B Cell Lymphoma Model, Eric A. Weaver, Christopher Y. Chen, Shannon M. May, Mary E. Barry, Michael A. Barry

Nebraska Center for Virology: Faculty Publications

We have screened human adenoviruses (Ads) for oncolytic activity against a variety of mouse and hamster cell lines and have found a number that are susceptible to a variety of Ad serotypes. A20 lymphoma is derived from BALB/c mice and is susceptible to infection and killing by a variety of human Ads. A20 is also a suitable cancer vaccine model, because these cells express a unique immunoglobulin variable region that can be targeted by vaccination. To compare Ads as cancer vaccines versus Ads as oncolytics, A20 tumors were initiated in im- munocompetent BALB/c mice. Mice immunized with first-generation Ad5 expressing …

Species D Adenoviruses As Oncolytics Against B-Cell Cancers, Christopher Y. Chen, Julien S. Senac, Eric A. Weaver, Shannon M. May, Diane F. Jelinek, Philip Greipp, Thomas Witzig, Michael A. Barry

Nebraska Center for Virology: Faculty Publications

Purpose: Oncolytic viruses are self-amplifying anticancer agents that make use of the natural ability of viruses to kill cells. Adenovirus serotype 5 (Ad5) has been extensively tested against solid cancers, but less so against B-cell cancers because these cells do not generally express the coxsackie and adenoviral receptor (CAR). To determine whether other adenoviruses might have better potency, we "mined" the adenovirus virome of 55 serotypes for viruses that could kill B-cell cancers.

Experimental Design: Fifteen adenoviruses selected to represent Ad species B, C, D, E, and F were tested in vitro against cell lines and primary patient B-cell cancers …

Evaluation Of The Modis Lai Product Using Independent Lidar-Derived Lai: A Case Study In Mixed Conifer Forest, Jennifer L.R. Jensen, Karen S. Humes, Andrew T. Hudak, Lee A. Vierling, Eric Delmelle

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

This study presents an alternative assessment of the MODIS LAI product for a 58,000 ha evergreen needleleaf forest located in the western Rocky Mountain range in northern Idaho by using lidar data to model (R²=0.86, RMSE=0.76) and map LAI at higher resolution across a large number of MODIS pixels in their entirety. Moderate resolution (30 m) lidar-based LAI estimates were aggregated to the resolution of the 1-km MODIS LAI product and compared to temporally-coincident MODIS retrievals. Differences in the MODIS and lidar-derived values of LAI were grouped and analyzed by several different factors, including MODIS retrieval algorithm, sun/sensor …

Tetherin Inhibits Prototypic Foamy Virus Release, Fengwen Xu, Juan Tan, Ruikang Liu, Dan Xu, Yue Li, Yunqi Geng, Chen Liang, Wentao Qiao

Nebraska Center for Virology: Faculty Publications

Background: Tetherin (also known as BST-2, CD317, and HM1.24) is an interferon- induced protein that blocks the release of a variety of enveloped viruses, such as retroviruses, filoviruses and herpesviruses. However, the relationship between tetherin and foamy viruses has not been clearly demonstrated.

Results: In this study, we found that tetherin of human, simian, bovine or canine origin inhibits the production of infectious prototypic foamy virus (PFV). The inhibition of PFV by human tetherin is counteracted by human immunodeficiency virus type 1 (HIV-1) Vpu. Furthermore, we generated human tetherin transmembrane domain deletion mutant (delTM), glycosyl phosphatidylinositol (GPI) anchor …

The Scientific Classification Of Wolves: Canis Lupus Soupus, L. David Mech

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Gray wolf, timber wolf, red wolf, eastern wolf, brush wolf, arctic wolf, Mexican wolf, maned wolf, Ethiopian wolf, etc., etc. How many kinds of wolves are there? And what are the differences? This is a really good question, and the answer is getting more complicated all the time. Let us start by going back a few years to the way science looked at wolves more traditionally— before the days of the new field of molecular genetics. Molecular genetics examines the actual DNA of animals and tries to classify them according to genetic similarities. ...

What does all this mean in …

Kin Encounter Rate And Inbreeding Avoidance In Canids, Eli Geffen, Michael Kam, Reuven Hefner, Pall Hersteinsson, Anders Angerbjorn, Love Dalen, Eva Fuglei, Karin Noren, Jennifer R. Adams, John Vucetich, Thomas J. Meier, L. David Mech, Bridgett M. Vonholdt, Daniel R. Stahler, Robert K. Wayne

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Mating with close kin can lead to inbreeding depression through the expression of recessive deleterious alleles and loss of heterozygosity. Mate selection may be affected by kin encounter rate, and inbreeding avoidance may not be uniform but associated with age and social system. Specifically, selection for kin recognition and inbreeding avoidance may be more developed in species that live in family groups or breed cooperatively. To test this hypothesis, we compared kin encounter rate and the proportion of related breeding pairs in noninbred and highly inbred canid populations. The chance of randomly encountering a full sib ranged between 1–8% and …

Mechanisms Of Decreased Cholesterol Absorption Mediated By Phytosterols In The Intestinal Lumen, Andrew W. Brown

Department of Nutrition and Health Sciences: Dissertations, Theses, and Student Research

Phytosterols and their fatty acyl esters have been known for decades to lower LDL cholesterol, making them powerful nutraceuticals in lowering cardiovascular disease risk. The mechanisms by which phytosterols lower cholesterol, though, have been incompletely characterized. Three studies were executed to examine three aspects of cholesterol and phytosterol interactions in the intestinal lumen. In the first study, the ability of pancreatic cholesterol esterase to hydrolyze phytosterol esters was examined. Pancreatic cholesterol esterase hydrolyzed phytosterol esters, but the rate of hydrolysis proved sensitive to the structures of both the sterol and ester components. In the second study, cholesterol micellarization was challenged …

Y-Like Retinal Ganglion Cells Innervate The Dorsal Raphe Nucleus In The Mongolian Gerbil (Meriones Unguiculatus), Liju Luan, Chaoran Ren, Benson Wui-Man Lau, Jian Yang, Gary E. Pickard, Kwok-Fai So, Mingliang Pu

School of Veterinary and Biomedical Sciences: Faculty Publications

Background: The dorsal raphe nucleus (DRN) of the mesencephalon is a complex multi-functional and multi-transmitter nucleus involved in a wide range of behavioral and physiological processes. The DRN receives a direct input from the retina. However little is known regarding the type of retinal ganglion cell (RGC) that innervates the DRN. We examined morphological characteristics and physiological properties of these DRN projecting ganglion cells.

Methodology/Principal Findings: The Mongolian gerbils are highly visual rodents with a diurnal/crepuscular activity rhythm. It has been widely used as experimental animals of various studies including seasonal affective disorders and depression. Young adult gerbils were used …

Challenges And Opportunities For Toxicology In Mexico, Rodrigo Franco, Balam Muñoz

School of Veterinary and Biomedical Sciences: Faculty Publications

We have developed this Special Issue titled “Challenges and Opportunities for Toxicology in Mexico” with the aim to highlight not only the challenges toxicology research faces in Mexico, but also the efforts and drive towards cutting edge research to address them. Altogether, this special issue should be a valuable source of information for all readers with an interest in toxicology and human health.

Mexico is an important economy worldwide and is a major exporter of several supplies and commodities. Because of this, its industry is a source of occupational exposure to several chemical derivatives (Nieusma 2011). The situation of occupational …

Body Mass Index Is Associated With Dietary Patterns And Health Conditions In Georgia Centenarians, Dorothy B. Hausman, Mary Ann Johnson, Adam Davey, Leonard W. Poon

Department of Nutrition and Health Sciences: Faculty Publications

Associations between body mass index (BMI) and dietary patterns and health conditions were explored in a population-based multiethnic sample of centenarians from northern Georgia. BMI ≤20 and ≥25 was prevalent in 30.9% and 25.3% of study participants, respectively. In a series of logistic regression analyses controlled for gender and place of residence, the probability of having BMI ≥25 was increased by being black versus white and having a low citrus fruit, noncitrus fruit, orange/yellow vegetable or total fruit and vegetable intake. The probability of having BMI ≤20 was not associated with dietary intake. When controlled for race, gender, residence, and …

Mammalia, Didelphimorphia, Didelphidae, Monodelphis Kunsi Pine, 1975: Distribution Extension And First Record For Eastern Amazonia, Donald Gettinger, Thiago Carvalho Modesto, Helena De Godoy Bergallo, Fernanda Martins-Hatano

Harold W. Manter Laboratory of Parasitology: Faculty Publications

We review the distributional records of Monodelphis kunsi, which occurs from eastern Bolivia, Paraguay, and northern Argentina into central Brazil. We report specimens of M. kunsi collected in the Carajás National Forest in eastern Pará, Brazil (06°03’00” S, 50°15’00” W), extending the known species range 430 km northward, into the eastern edge of Amazonia. This is the first record for the state of Pará, and the first certain record for the Amazon Region. Two adult males and one subadult female were deposited in the Museu Nacional, Rio de Janeiro.

Evaluation Of Fences For Containing Feral Swine Under Simulated Depopulation Conditions, Michael J. Lavelle, Kurt C. Vercauteren, Hefley, Gregory E. Phillips, Scott Hygnstrom, David B. Long, Justin W. Fischer, Seth R. Swafford, Tyler A. Campbell

United States Department of Agriculture Wildlife Services: Staff Publications

Populations of feral swine (Sus scrofa) are estimated to include >2 million animals in the state of Texas, USA, alone. Feral swine damage to property, crops, and livestock exceeds $50 million annually. These figures do not include the increased risks and costs associated with the potential for feral swine to spread disease to domestic livestock. Thus, effective bio-security measures will be needed to quickly isolate affected feral swine populations during disease outbreaks. We evaluated enclosures built of 0.86-m-tall traditional hog panels for containing feral swine during 35 trials, each involving 6 recently caught animals exposed to increasing levels …

Excluding Nontarget Species From Brown Tree Snake, Boiga Irregularis (Reptilia: Colubridae), Bait Stations: Experimental Tests Of Station Design And Placement, Tom Mathies, Russell Scarpino, Brenna A. Levine, Craig S. Clark, Julie A. Savidge

United States Department of Agriculture Wildlife Services: Staff Publications

Bait stations with toxic baits are an emerging technology for eradication of the invasive brown tree snake (Boiga irregularis) on Guam, yet potential interferences by nontarget species are largely unknown. We tested the efficacies of three bait station designs together with three commonly used station support structures to exclude nonnative rats (roof rat, Rattus rattus; Norway rat, Rattus norvegicus; Polynesian rat, Rattus exulans) and native coconut crabs (Birgus latro). When directly presented, all species readily consumed the dead neonatal mouse baits (nontoxic) including those replicating decomposing baits in the field. When bait stations …

Monophyly Of Clade Iii Nematodes Is Not Supported By Phylogenetic Analysis Of Complete Mitochondrial Genome Sequences, Joong-Ki Park, Tahera Sultana, Sang-Hwa Lee, Seokha Kang, Hyong Kyu Kim, Gi-Sik Min, Keeseon S. Eom, Steven A. Nadler

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Abstract Background: The orders Ascaridida, Oxyurida, and Spirurida represent major components of zooparasitic nematode diversity, including many species of veterinary and medical importance. Phylum-wide nematode phylogenetic hypotheses have mainly been based on nuclear rDNA sequences, but more recently complete mitochondrial (mtDNA) gene sequences have provided another source of molecular information to evaluate relationships. Although there is much agreement between nuclear rDNA and mtDNA phylogenies, relationships among certain major clades are different. In this study we report that mtDNA sequences do not support the monophyly of Ascaridida, Oxyurida and Spirurida (clade III) in contrast to results for nuclear rDNA. Results from …

A Tradable Conservation Easement For Vulnerable Conservation Objectives, W. William Weeks

Articles by Maurer Faculty

The critical conservation objectives in some conservation easements will probably be compromised by the effects of climate change in the relatively near future. Prompted to consider that likelihood, we can similarly predict that landscape fragmentation, invasive species, and other catastrophes— anthropogenic and natural—may also seriously diminish the capacity of particular parcels of land to serve narrowly defined conservation purposes, and especially, the conservation of a particular element of biodiversity.

Statutory Reform To Protect Migrations As Phenomena Of Abundance, W. William Weeks, Jeffrey B. Hyman, Andrea Need

Articles by Maurer Faculty

Animal migrations capture the human mind and heart like few other natural phenomena. Migrations provide ecological, psychological (e.g., aesthetic), cultural, and economic benefits. Increasingly, though, migrations are being recognized as threatened phenomena-that is, spectacular aspects of the life history of animal species often involving large numbers of individuals, but which are threatened with impoverishment or demise, even though the species per se may not be in peril. Migration phenomena are themselves worthy of protection, as a category of biodiversity Yet, conserving migratory populations and their migrations is particularly problematic. Migratory animals are especially vulnerable to a variety of threats because …

The Role Of Histone H4 Biotinylation In The Structure Of Nucleosomes, Nina A. Filenko, Carol Kolar, John T. West, S. Abbie Smith, Yousef I. Hassan, Gloria E. O. Borgstahl, Janos Zempleni, Yuri L. Lyubchenko

Department of Nutrition and Health Sciences: Faculty Publications

Background: Post-translational modifications of histones play important roles in regulating nucleosome structure and gene transcription. It has been shown that biotinylation of histone H4 at lysine-12 in histone H4 (K12Bio-H4) is associated with repression of a number of genes. We hypothesized that biotinylation modifies the physical structure of nucleosomes, and that biotin-induced conformational changes contribute to gene silencing associated with histone biotinylation.

Methodology/Principal Findings: To test this hypothesis we used atomic force microscopy to directly analyze structures of nucleosomes formed with biotin-modified and non-modified H4. The analysis of the AFM images revealed a 13% increase in the length of …

Active Use Of Coyotes (Canis Latrans) To Detect Bovine Tuberculosis In Northeastern Michigan, Usa, Are R. Berentsen, Michael R. Dunbar, Shylo R. Johnson, S. Robbe-Austerman, L. Martinez, R. L. Jones

United States Department of Agriculture Wildlife Services: Staff Publications

Bovine tuberculosis (bTB) is endemic in white-tailed deer (Odocoileus virginianus) in northeastern Michigan, USA, and research suggests transmission to cattle. Prevalence of the disease in deer is estimated at 1.8%, but as prevalence decreases the difficulty of detection increases. Research suggests coyotes (Canis latrans) have a higher prevalence of bTB in Michigan than deer and sampling coyotes may be a more efficient surveillance tool to detect presence or spread of the disease. Coyotes possess suitable ecological characteristics to serve as a sentinel species, assuming transmission between coyotes is not significant. The question of whether free-ranging coyotes shed Mycobacterium bovis, the …

The Carrot Or The Stick? Evaluation Of Education And Enforcement As Management Tools For Human-Wildlife Conflicts., Sharon Baruch-Mordo, Stewart W. Breck, Kenneth R. Wilson, John Broderick

United States Department of Agriculture Wildlife Services: Staff Publications

Evidence-based decision-making is critical for implementing conservation actions, especially for human-wildlife conflicts, which have been increasing worldwide. Conservation practitioners recognize that long-term solutions should include altering human behaviors, and public education and enforcement of wildlife-related laws are two management actions frequently implemented, but with little empirical evidence evaluating their success. We used a system where human-black bear conflicts were common, to experimentally test the efficacy of education and enforcement in altering human behavior to better secure attractants (garbage) from bears. We conducted 3 experiments in Aspen CO, USA to evaluate: 1) on-site education in communal dwellings and construction sites, 2) …

Vulture Flight Behavior And Implications For Aircraft Safety, Michael L. Avery, John S. Humphrey, Trey S. Daughtery, Justin W. Fischer, Michael P. Milleson, Eric A. Tillman, William E. Bruce, W. David Walter

United States Department of Agriculture Wildlife Services: Staff Publications

Growing vulture populations represent increasing hazards to civil and military aircraft. To assess vulture flight behavior and activity patterns at the Marine Corps Air Station in Beaufort, South Carolina, we equipped 11 black vultures (Coragyps atratus) and 11 turkey vultures (Cathartes aura) with solarpowered Global Positioning System (GPS) satellite transmitters during a 2-year study (1 Oct 2006–30 Sep 2008). Turkey vultures had larger seasonal home ranges than did black vultures, and 2 turkey vultures made round-trips to Florida. Black vultures consistently spent less time in flight (8.4%) than did turkey vultures (18.9%), and black vultures flew at higher altitudes than …

Nilgai Antelope In Northern Mexico As A Possible Carrier For Cattle Fever Ticks And Babesia Bovis And Babesia Bigemina., E M. Cardenas-Canales, J. Alfonso Ortega-Santos, Tyler A. Campbell, Zeferino Garcia-Vaquez, Antonio Cantu-Covarrubias, Julio V. Figueroa-Millian, Randy W. Deyoung, David G. Hewitt, Fred C. Bryant

United States Department of Agriculture Wildlife Services: Staff Publications

Of 20 blood samples from nilgais from Me´ xico, five were polymerase chain reaction-positive for Babesia bigemina and one for Babesia bovis. Positive samples had the expected 170 (B. bigemina) and 291 (B. bovis) base pairs and were identical to Gen-Bank B. bigemina accession S45366 and B. bovis M38218.

Diseases And Parasites, Kurt C. Vercauteren, Tyler A. Campbell

United States Department of Agriculture Wildlife Services: Staff Publications

No abstract provided.

Nutrient Management Record Keeping Calendar, July 2011-December 2012, Leslie J. Johnson, Charles Shapiro, Charles Wortmann, Chris G. Henry, Larry Howard, Tamilee D. Nennich

Nebraska Cooperative Extension: Faculty and Staff Publications

Records for Nebraska Concentrated Animal Feeding Operations

Record the initials of the person performing the inspection each time. Check marks will not satisfy the record-keeping requirements.

Record any maintenance and/or repairs.

Correct all deficiencies within 30 days.

Interactions Of Transgenic Bacillus Thuringiensis Insecticidal Crops With Spiders (Araneae), Julie A. Peterson, Jonathan Lundgren, James D. Harwood

Department of Entomology: Faculty Publications

Genetically modified crops expressing insecticidal proteins from Bacillus thuringiensis (Bt) have dramatically increased in acreage since their introduction in the mid-1990’s. Although the insecticidal mechanisms of Bt target specific pests, concerns persist regarding direct and indirect effects on non-target organisms. In the field, spiders may be exposed to Bt toxins via multiple routes, including phytophagy and pollenivory, consumption of Bt-containing prey, and soil exudates in the detrital food web. Beyond direct toxicity, Bt crops may also have indirect impacts, including pleiotropic and preymediated effects. Here, we comprehensively review the literature and use meta-analyses to reveal that foliar spider abundance is …