Life Sciences Commons^™

Factors Determining Media Coverage Of Meat And Poultry Recalls: Evidence From The Ap Newswire, Thais Fregonesi Carvalho

Graduate Theses and Dissertations

Food safety is an important public health issue. Product recalls are an important part of the overall food safety system and occur when potentially unsafe products enter the marketplace. However, it is important that information about the recall ultimately reaches the public. This research assesses the publicity that recalls receive by the popular media. The focus is specifically on recalls of meat and poultry products. Publicity is measured by coverage in the AP Newswire. Data were gathered from the United States Department of Agriculture's Food Safety and Inspection Service (FSIS) and cover meat and poultry recalls from 1982 to 2009. …

Host-Virus Interactions Of Infectious Laryngotracheitis Virus Infection In Cultured Cells, Jeong Yoon Lee

Graduate Theses and Dissertations

Infectious laryngotracheitis virus (ILTV; Gallid herpesvirus 1) causes upper respiratory diseases in mainly chickens and exhibits 90-100% of high morbidity and up to 70% of mortality, resulting in huge economic losses in the poultry industry worldwide.

To study host-ILTV interactions, the changes in genome-wide gene expressions in response to wild-type and vaccine ILTV infections in primary chicken embryo lung cells were investigated using microarray analysis. Results provide crucial insights into host cell pathogenic and immunogenic responses against wild-type and vaccine ILTV infections. Using microarray method and Ingenuity Pathway Analysis (IPA) bioinformatics tool, 273 and 306 differentially expressed genes were identified …

Scotts Bluff National Monument Plant Community Composition And Structure Monitoring, 2011 Annual Report, Isabel W. Ashton, Michael Prowatzke, Michael R. Bynum, Tim Shepherd, Stephen K. Wilson, Kara Paintner-Green

United States National Park Service: Publications

Executive Summary

The Northern Great Plains Inventory & Monitoring Network (NGPN) was established to develop and provide scientifically credible information on the current status and long-term trends of the composition, structure, and function of ecosystems in thirteen parks located in five northern Great Plains states. NGPN identified upland plant communities, exotic plant early detection, and riparian lowland communities as vital signs that can be used to better understand the condition of terrestrial park ecosystems (Gitzen et al. 2010). Upland and riparian ecosystems are important targets for vegetation monitoring because the status and trends in plant communities provide critical insights into …

Agate Fossil Beds National Monument Plant Community Composition And Structure Monitoring, 2011 Annual Report, Isabel W. Ashton, Michael Prowatzke, Michael R. Bynum, Tim Shepherd, Stephen K. Wilson, Kara Paintner-Green

United States National Park Service: Publications

Executive Summary

The Northern Great Plains Inventory & Monitoring Network (NGPN) was established to develop and provide scientifically credible information on the current status and long-term trends of the composition, structure, and function of ecosystems in thirteen parks located in five northern Great Plains states. NGPN identified upland plant communities, exotic plant early detection, and riparian lowland communities as vital signs that can be used to better understand the condition of terrestrial park ecosystems (Gitzen et al. 2010). Upland and riparian ecosystems are important targets for vegetation monitoring because the status and trends in plant communities provide critical insights into …

Cellular Poly(C) Binding Proteins 1 And 2 Interact With Porcine Reproductive And Respiratory Syndrome Virus Nonstructural Protein 1Β And Support Viral Replication, Lalit Beura, Phat X. Dinh, Fernando A. Osorio, Asit K. Pattnaik

School of Veterinary and Biomedical Sciences: Faculty Publications

Porcine reproductive and respiratory syndrome virus (PRRSV) infection of swine results in substantial economic losses to the swine industry worldwide. Identification of cellular factors involved in PRRSV life cycle not only will enable a better understanding of virus biology but also has the potential for the development of antiviral therapeutics. The PRRSV nonstructural protein 1 (nsp1) has been shown to be involved in at least two important functions in the infected hosts: (i) mediation of viral subgenomic (sg) mRNA transcription and (ii) suppression of the host’s innate immune response mechanisms. To further our understanding of the role of the viral …

Fungal Virulence And Development Is Regulated By Alternative Pre-Mrna 3′End Processing In Magnaporthe Oryzae, Marina Franceschetti, Emilio Bueno, Richard A. Wilson, Sara L. Tucker, Concepción Gómez-Mena, Grant Calder, Ane Sesma

Fungal Molecular Plant-Microbe Interactions

RNA-binding proteins play a central role in post-transcriptional mechanisms that control gene expression. Identification of novel RNA-binding proteins in fungi is essential to unravel post-transcriptional networks and cellular processes that confer identity to the fungal kingdom. Here, we carried out the functional characterisation of the filamentous fungus-specific RNAbinding protein RBP35 required for full virulence and development in the rice blast fungus. RBP35 contains an N-terminal RNA recognition motif (RRM) and six Arg-Gly-Gly tripeptide repeats. Immunoblots identified two RBP35 protein isoforms that show a steady-state nuclear localisation and bind RNA in vitro. RBP35 coimmunoprecipitates in vivo with Cleavage Factor I (CFI) …

A Comparison Of The Effectiveness Of Scent Lures On Attracting Mesopredators, Tom Batter

Department of Environmental Studies: Undergraduate Student Theses

A mesopredator is a medium-sized middle trophic level predator such as a raccoon (Procyon lotor), red fox (Vulpes vulpes), striped skunk (Mephitis mephitis), or coyote (Canis latrans; Crooks and Soule 1999). Mesopredators have long been trapped for recreational, economic, or academic reasons. Throughout human history trapping has been used to capture animals for food and skins, as well as to prevent personal harm and property damage from predators. In order to increase the probability of success, scent lures are often used as an attractant (Geary 1984, Mills et al. 2010, Schlexer 2008).

Herpetofaunal Diversity At Yankee Hill State Lake And Wildlife Management Area, Lancaster County, Nebraska, Shelby Klima

Department of Environmental Studies: Undergraduate Student Theses

A survey for amphibians and reptiles was conducted in March through October 2011 at Yankee Hill Wildlife Management Area in Lancaster County, Nebraska. The survey was conducted using several different techniques including: visual and auditory encounters, artificial and natural cover objects, aquatic trappings and road surveys. A total of 145 individuals representing 12 species were identified including seven reptiles and five amphibians. A total of 48% of the species that may potentially occur on the site were encountered, all of which are common, widely distributed generalist species. Neither Graham’s Crayfish Snake nor the Massasauga, both target species for this survey, …

Mapping Potential Crp Land And Determining Crp Profitability In Lancaster County, Jamie Pesek

Department of Environmental Studies: Undergraduate Student Theses

Annually 17 tons of soil is lost due to the erosion of agriculture land. A majority of the soil lost is fertile topsoil, which can render the land unproductive. The Conservation Reserve Program (CRP) was enacted to reduce the high erosion rates on agriculture land by giving landowners a monetary incentive to let their land lay idle and allow the soil to regenerate. Although there is awareness of the benefits of CRP, little effort has been put toward delineating CRP eligible land. In this project, Geographical Information Systems were used to map CRP eligible land in Lancaster County, Nebraska based …

Avian Species Abundance In Response To Recreational Trail Use, Carrie A. Wencel

Department of Environmental Studies: Undergraduate Student Theses

Studies have indicated that non-consumptive outdoor recreation may affect wildlife. Thus, as the nation increases interest in outdoor recreation, data suggests the effect on wildlife will also increase. Previous studies indicate that as disturbance to wildlife increases, both avian species richness will decrease. Knowing how to anticipate effects on native species when planning and managing recreational areas is important in order to both provide for human desires and ensure the least impact to local species diversity.

The goal of this project was to observe and compare avian species richness and diversity between selected trail sites within Shevlin Park, Bend, Oregon …

Prey Selection By The Northern Watersnake, Nerodia Sipedon, Kyle O' Connell

Department of Environmental Studies: Undergraduate Student Theses

Prey selection and composition of the northern waternake, Nerodia sipedon was investigated between 8/2010 and 3/2011 by palpation of stomach contents in the field and conducting laboratory trials. 41 snakes were captured, five yielded prey contents. Fish parts, freshwater mussels, and an insect exoskeleton were found. No amphibians were found despite availability at study sites. Snakes in the laboratory underwent 22 trials, feeding on 11 occasions. Snakes fed on an equal number of both fish species, revealing no selection. Further research is needed to determine the rate of digestion of N. sipedon.

Empathy-Based Conservation: An Interdisciplinary Approach To Conservation Policy And Decision-Making, Kaitlyn Delashmutt

Department of Environmental Studies: Undergraduate Student Theses

In the late 20^th century, neuroscientists in Italy discovered a neuron in the brain capable of mentally mimicking the emotions derived from the actions of others (Rizzolatti and Craighero, 2004). It is the process that makes your elbow ache when someone else knocks their elbow on the counter or the uncontrollable smile that creeps up when someone smiles at you. No questions asked, people intuitively sense what others are feeling. The old school of thought was that humans deduced through logic and reason the actions of others and interpreted the emotions through a rational process (Carew et al, 2008). …

Degradation Of Atrazine By White Rot And Soil Fungi, Gerald Presley

Undergraduate Honors Theses

The widespread use of atrazine in agriculture has lead to an abundance of this toxic chemical in the environment. Fungi that have the ability to degrade atrazine into less toxic products have been identified and used in the remediation of atrazine. In this study atrazine degradation in a defined liquid media was characterized in a diverse group of white rot basidiomycete and deuteromycete soil fungi. Atrazine did not have an effect on fungal growth although each species produced a different amount of biomass in culture. Statistical analysis showed that biomass production was an important factor in determining the amount of …

The Effect Of Physical Activity On The Insulin Response To Frequent Meals, Michael E. Holmstrup

Exercise Science - Dissertations

Long, uninterrupted bouts of sedentary behavior are thought to negatively influence insulin sensitivity, and may impact metabolic function regardless of adherence to general physical activity guidelines. The purpose of this study was to determine the combined effect of physical activity (1 h continuous exercise v. intermittent exercise throughout the day) and meal consumption on glucose excursions, insulin secretion, and appetite markers in obese individuals with prediabetes. Methods: Eleven healthy, obese subjects (>30 kg/m2) with prediabetes underwent 3, 12 h study days including sedentary behavior (SED), exercise (EX; 1h morning exercise, 60-65% VO2 max), and physical activity (PA; 12 hourly, …

Supplementing Distillers' Grains In Extensive Beef Cattle Systems, Kelsey Rolfe

Department of Animal Science: Dissertations, Theses, and Student Research

A 3-yr study evaluated effects of supplementing modified wet distillers grains with solubles during summer grazing and subsequent feedlot sorting on long yearling steers. During summer grazing, supplemented steers had greater ADG and were more profitable than non-supplemented steers. At feedlot entry, supplemented steers were 48 kg heavier than non-supplemented steers. Feed efficiency and DMI were not different between supplementation treatments during finishing. Supplemented steers were fed 24 fewer days to reach a similar 12^th rib fat thickness, had greater LM area, and lower marbling compared to non-supplemented steers. Overall profitability favored supplementing steers because less expensive summer gains …

Nutrient Management In Beef Feedlots And Forage Replacement With Byproduct And Crop Residues, Annie J. Doerr

Department of Animal Science: Dissertations, Theses, and Student Research

Finishing cattle performance and mass balance was evaluated with Micro-Aid was fed in diets containing wet distillers grains plus solubles (WDGS) at 35% (DM basis). Micro-Aid is a feed ingredient derived from a Yucca extract which contains saponins, and was included in the treatment diet at 1 g/hd daily in the supplement. There was no difference in performance and carcass characteristics between treatments. In the winter experiment, cattle fed Micro-Aid had a greater amount of OM and DM removed from the pen surface. Micro-Aid in the diet increased the amount of manure N and decreased N lossis in the winter. …

Evaluation Of Condensed Distillers’ Solubles And Field Peas For Feedlot Cattle, Anna C. Pesta

Department of Animal Science: Dissertations, Theses, and Student Research

Limited previous research has investigated feeding high levels of condensed distillers solubles (CDS) as an energy source for feedlot cattle. As an energy dense and relatively inexpensive by-product feed from ethanol production, CDS may provide another opportunity to replace high priced corn in finishing diets. Two feedlot studies and one metabolism study were conducted to evaluate the effects of feeding CDS in both corn-based diets, and in combination with other by-product feeds on cattle performance and carcass characteristics. Inclusion of up to 36% CDS, providing 9.4% dietary fat improved performance relative to a corn-based control, with the optimum level of …

Identification Of Soybean Seed Oil Qtls With Little Or No Impact On Seed Protein, Yu-Kai Sun

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

A QTL (Quantitative Trait Locus) is chromosomal location of a gene controlling a specific phenotypic characteristic (trait). This trait might be governed by two or more genes and may be affected by environmental interaction. The USA soybean seed composition, when averaged over years and states, is 18.7% oil and 35.3% protein. Soybean seed provides cooking oil for humans and protein for livestock. Concurrent genetic improvement of seed protein (pro) and oil content has been difficult to achieve due to the negative genetic correlation of the two traits. This negative correlation could be due to a pair of tightly linked protein …

A New Genus Of Miniaturized And Pug-Nosed Gecko From South America (Sphaerodactylidae: Gekkota), Tony Gamble, Juan D. Daza, Guarino R. Colli, Laurie J. Vitt, Aaron M. Bauer

Biological Sciences Faculty Research and Publications

Sphaerodactyl geckos comprise five genera distributed across Central and South America and the Caribbean. We estimated phylogenetic relationships among sphaerodactyl genera using both separate and combined analyses of seven nuclear genes. Relationships among genera were incongruent at different loci and phylogenies were characterized by short, in some cases zero-length, internal branches and poor phylogenetic support at most nodes. We recovered a polyphyletic Coleodactylus, with Coleodactylus amazonicus being deeply divergent from the remaining Coleodactylus species sampled. The C. amazonicus lineage possessed unique codon deletions in the genes PTPN₁₂ and RBMX while the remaining Coleodactylus species had unique codon …

The Food Waste Management System In A Southeastern Hospital, Amal Habadi

All Theses

Effective waste management has always posed a challenge to those in food service operations. This study investigated the amount of food waste from Bon Secours St. Francis Health System foodservice operations using the Trim Trax¨ program. Trim Trax¨ is a food waste management program in which employees measure the volume of waste produced in pre-production and post-production areas. The objectives of this study were to collect the amount of waste produced during meal preparations and compare it with three weeks of retrospective data kept by employees in the salad/baking pre-production area, the cooking/grilling pre-production area and post-production area. Results showed …

A Measure Of Self-Efficacy Among Agency Directors To Offer Nutrition Education To Lowcountry Food Bank Clients, Lucie Maguire

All Theses

In 2005, the Lowcountry Food Bank (LCFB) in Charleston, SC, launched an initiative to provide nutrition education to clients that seek food assistance. The agency directors of the 332 member agencies of the LCFB are in direct contact with clients, therefore they could provide nutrition education rather than the LCFB staff alone. As such, the self-efficacy of agency directors to deliver nutrition education must be measured. The objective of this project was to measure the self-efficacy of agency directors of the LCFB. A 17-item instrument measuring self-efficacy was developed, including ten validated items from the General Self-Efficacy Scale and an …

Effects Of Dietary Supplementation Of Conjugated Linoleic Acid In Horses, Shannon Headley

All Theses

Conjugated linoleic acid (CLA) reduces inflammation via the inhibition of cyclooxygenase II , thus reducing prostaglandin E2 (PGE2) production. Conjugated linoleic acid has a suggested osteoclast-suppressive role in bone remodeling and osteoarthritis, which are dependent on bone resorptive stimulator PGE2. Bone resorption marker, deoxypyridinoline (DPD), and bone formation marker, bone alkaline phosphatase (BAP), have been modulated by CLA supplementation in other species. Recent research in equine exercise physiology investigated dietary supplementation of polyunsaturated fatty acids as a possible prevention and treatment for osteoarthritis, but CLA supplementation has putative effects on skeletal function or inflammation in horses has not been reported. …

Effects Of Canopy And Cultural Treatments On Fine Fuel Production, Fire Behavior, And Short-Term Fire Effects In Loblolly Pine (>I/I< L.) Stands Being Restored To Longleaf Pine (>I/I< Mill.), Carsyn Tennant

All Theses

Across the southeastern United States, anthropogenic factors such as land conversion and fire suppression have resulted in the prevalence of loblolly pine in areas historically occupied by longleaf pine. Compared to longleaf pine forests, loblolly stands often contain a substantial broad-leaved midstory and lack the ground layer that contributes fuels essential for the frequent, low intensity surface fire regime necessary to sustain the longleaf ecosystem. Currently, there is considerable interest in restoring longleaf pine habitats to areas occupied by loblolly pine. The retention of mature canopy trees is often necessary to maintain ecosystem function, to preserve habitat features, and to …

Potential Of Three Brassica Cover Crops For Biofumigation In The Field And The Relationship Between Soil Myrosinase And Biofumigation Efficacy, Zachariah Hansen

All Theses

A greenhouse study was set up in January 2011 to investigate the effect of soil myrosinase concentration and Bacillus spp. on the release efficiency of isothiocyanates (ITCs) from freeze-dried `Pacific Gold' mustard leaf tissue after incorporation into soil. Seventeen diverse soil samples collected from various regions of South Carolina were used in the study. A correlation analysis was conducted to determine if soil myrosinase was positively correlated with ITC concentrations after mustard incorporation. ITC concentrations were then analyzed with soilborne Bacillus spp. populations, bean emergence, disease incidence, and shoot weight to identify significant correlations. Finally, the effect of freeze-dried `Pacific …

Characterization Of De Novo Fatty Acid Biosynthesis In Soybean Somatic Embryo Plastids, Karen Clark

All Theses

A method for the isolation of intact physiologically active plastids from rapidly developing soybean (Glycine max L.) somatic embryos has been developed for the in vitro study of lipid metabolism. Using de novo fatty acid biosynthesis from 14C-acetate as a marker for physiological functionality, the greatest rates of fatty acid biosynthesis were recovered in 3000 x g fractions that were isolated in the presence of 0.5 M sorbitol, with essentially no activity occurring in the 3000 x g supernatant. Plastids purified on 10% Percoll were approximately 70 and 97 % free from mitochondrial and ER contamination, respectively, as judged …

Effects Of Larval Exposure To Bacterial Species In Three Genera On Life History Traits And Oviposition Behavior In The Southern House Mosquito, Culex Quinquefasciatus, Jonathan Gravgaard

All Theses

The biofilm is the most common niche for microorganisms living in aquatic environments. Forming a biofilm provides the means to resist shear forces, adverse osmolarity, chemical agents, and other environmental stressors. Biofilms also provide a major food source for aquatic arthropods like mosquito larvae. Culex quinquefasciatus larvae are found in freshwater pools with high organic content, and have the ability to graze on bacterial biofilms. To study how C. quinquefasciatus mosquitoes interact with bacteria in their environment I developed an experimental system that allows mosquito larvae to freely graze on bacteria in either the planktonic or biofilm state. The efficacy …

Ecological Disinfestation: Physical And Biological Characterization Of Filtration Substrates For Removing Zoospores Of Phytophthora Nicotianae From Water, Elizabeth Nyberg

All Theses

Although recycling irrigation water is beneficial to the nursery industry as it serves to decrease potable water usage and reduces the release of excess agrichemicals into the environment, it also poses the risk of becoming the source for and means of dispersing water-borne plant pathogens. Plant pathogens of major concern in irrigation water are species of Phytophthora. These pathogens are a significant threat because they can attack a vast number of plants, many of which are ornamental crops grown in nurseries, by releasing motile zoospores directly into irrigation water. Several treatment methods are available to remove plant pathogens from irrigation …

Use Of The Health Belief Model To Assess Hand Hygiene Knowledge, Perceptions, And Practices Of Saudi Students Studying In The U.S., Najla Khateeb

All Theses

Many factors influence hygiene but those that have the greatest impact vary widely across population groups. Our aim was to characterize hand hygiene practices of Saudi students studying in the U.S. by completing two objectives: (1) assess hand hygiene knowledge, perceptions, and practices of Saudi students studying in the U.S. and (2) determine the relationship among knowledge, perceptions, and practices.
A modified version of the Health Belief Model was the theoretical framework to characterize hand hygiene practices. A web-based instrument was posted to the ¬DSaudis Studying in USAÁÂ Facebook page. The instrument was prepared in English then translated into Arabic. …

The Y-Str Genetic Diversity Of An Idaho Basque Population, With Comparison To European Basques And Us Caucasians, Josu Zubizarreta, Michael C. Davis, Greg Hampikian

Biology Faculty Publications and Presentations

Fifty unrelated Basque males from southwest Idaho were typed for the 17 Y-STR loci in the Yfiler multiplex kit (DYS19, DYS389I, DYS389II, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438, DYS439, DYS448, DYS456, DYS458, DYS635, YGATA_H4.1 and DYS385a/b). A total of 42 haplotypes were identified, with no more than two individuals sharing a single haplotype. The haplotype diversity (HD) was 0.9935, and gene diversity (D) over loci was 0.457 ± 0.137. The Idaho Basque population was compared to the source population from the Basque autonomous region of Northern Spain and Southern France, as well as a US Caucasian population. The haplotype diversity …

The Marketplace Of Boston: Macrobotanical Remains From Faneuil Hall, Ciana Faye Meyers

Graduate Masters Theses

Residents of Boston in the eighteenth century utilized a wide range of botanical materials in their daily lives, navigating complex urban marketing systems and utilizing their own individual ingenuity to procure botanical resources. The one thousand eight hundred and eighty-three botanical remains recovered from a "community midden" underneath the present-day Faneuil Hall represents a diverse collection of taxa which encodes information not only about the localized dietary practices of colonial urban residents, but also helps to illuminate the more subtle ramifications of Boston's participation in the Atlantic economy on the lives of its residents. These botanical remains represent taxa from …