Life Sciences Commons^™

The Pleiotropic Mutant R50 (Sym16): A Link Between Cytokinin And Starch Metabolism May Explain Its Seed Phenotype, Chengli Long

Theses and Dissertations (Comprehensive)

Cytokinins are a class of adenine-based plant hormones that stimulate cell divisions and are therefore essential for organ growth and development. The role that cytokinin plays in nodulation and that of R50 (syml6) in particular is very complex. In this study, a cytokinin antagonist and a cytokinin oxidase (CKX) inhibitor were used as tools to study the effects of cytokinin perception or cytokinin degradation on nodulation in pea, the cytokinin transduction pathway, especially that induced by CRE1/AHK4, and CKX play a significant role in pea nodulation. Comparison of the full length sequences PsCKX2 cDNAs from Sparkle and R50 …

The Role Of The Subtalar Joint And The Influence Of Footwear Characteristics During Slip Perturbations, Jessica M.R. Berrigan

Theses and Dissertations (Comprehensive)

Slips are considered one of the most common causes of major accidental injuries. The objective of this thesis is two-fold. The first objective is to determine the role of the subtalar joint during a slipping perturbation. The second is to determine if certain footwear characteristics, that may restrict the normal function of the subtalar joint (i.e., insole stiffness and heel counter stiffness), will change the response to unexpected heel contact slipping perturbations.

Forty-two participants (30 females, 12 males) were recruited from a university aged population (21.19 years ± 2.7 years). Trials were performed over a 10 m walkway with rectangular …

Microbial Community Characterization And Pathogen Analysis Within Constructed Wetlands Of Varying Scale Designed For Contaminant Removal, Michael R. Mitzel

Theses and Dissertations (Comprehensive)

Constructed wetlands (CWs) are complex treatment environments, requiring an integrative research approach to improve our understanding of them. The goal of this thesis was to establish an understanding of the functional and structural characteristics of microbial communities within bench-, field- and industrial-scale environmental treatment systems. The impact of pathogenic and/or antibiotic contaminants on these communities based on their functional and structural profiles using community-level physiological profiling (CLPP) and denaturing-gradient gel electrophoresis (DGGE), respectively, was investigated. Under normal operation, bench-, field- and industrial-scale treatment systems were able to produce similarly behaving structural and functional profiles. Increased retention time was consistently associated …

Raccoon (Procyon Lotor) Movements And Dispersal Associated With Ridges And Valleys Of Pennsylvania: Implications For Rabies Management, Robert B. Puskas, Justin W. Fischer, Craig B. Swope, Mike R. Dunbar, Robert G. Mclean, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

The raccoon (Procyon lotor) continues to be a prominent terrestrial rabies reservoir in the eastern United States. Describing the dispersal and movements of these animals and determining geographic features that are natural hindrances or corridors to movements could be used to assist oral rabies vaccination efforts. The landscape of the ridge-and-valley system in Pennsylvania exhibits characteristics of both natural potential hindrances and travel corridors to the movements of wildlife. The movements of 49 raccoons were monitored throughout a ridge and two adjacent valley sites to assess their movements related to these landscape features. Results suggest that few raccoons …

Site Use Of European Starlings Captured And Radio-Tagged At Texas Feedlots During Winter, H. Jeffrey Homan, A.A. Slowik, Linda B. Penry, George M. Linz, Michael J. Bodenchuk, Rickey L. Gilliland

United States Department of Agriculture Wildlife Services: Staff Publications

We radio tagged and tracked 50 European starlings between December 2008 and January 2009 at 3 feedlots in the northern Texas Panhandle. Daily fidelity to sites of capture (home feedlots) was different among the 3 radio-tagged cohorts. Cohorts from Sites A and C were recorded at home feedlots on 48 and 59% of tracking days, respectively. The Site B cohort was at its home feedlot 95% of days. There were qualitative differences in use of home feedlots between cohorts A and C. The former were nearly obligate in their use of concentrated animal feeding operations (CAFO), whereas the latter tended …

Comparative Toxicity Of Diphacinone To Northern Bobwhite (Colinus Virginianus) And American Kestrels (Falco Sparverius), Barnett A. Rattner, Katherine E. Horak, Sarah E. Warner, Daniel D. Day, John J. Johnston

United States Department of Agriculture Wildlife Services: Staff Publications

The acute oral toxicity of the anticoagulant rodenticide diphacinone was found to be about 20 times greater to American kestrels (LD₅₀=97 mg/kg) than to northern bobwhite (LD₅₀=2,014 mg/kg). Several precise and sensitive clotting assays (prothrombin time, Russell’s Viper venom time, thrombin clotting time) were adapted for use in these species, and this combination of assays is recommended to detect effects of diphacinone and other rodenticides on coagulation. Oral administration of diphacinone over a range of doses (sublethal to the extrapolated LD₁₅) prolonged prothrombin time and Russell’s Viper venom time within 24 to 48 hrs …

Acute Toxicity Of Diphacinone In Northern Bobwhite: Effects On Survival And Blood Clotting, Barnett A. Rattner, Katherine E. Horak, Sarah E. Warner, John J. Johnston

United States Department of Agriculture Wildlife Services: Staff Publications

The anticoagulant rodenticide diphacinone was slightly toxic (acuteoralLD₅₀ 2014 mg/kg) to Northern bobwhite (Colinus virginianus) in a 14-day acute toxicity trial. Precise and sensitive assays of blood clotting (prothrombin time, Russell’s Viper venom time, and thrombin clotting time) were adapted for use in quail, and this combination of assays is recommended to measure the effects of anticoagulant rodenticides. A single oral sub lethal dose of diphacinone (434mg/kg body weight) prolonged clotting time at 48 h post-dose compared to controls. At 783 mg/kg (approximate LD₀₂), clotting time was prolonged at both 24 and 48 h post-dose. …

Arthropods Of A Semi-Natural Grassland In An Urban Environment: The John F. Kennedy International Airport, New York, Lisa Kutschbach-Brohl, Brian E. Washburn, Glen E. Bernhardt, Richard B. Chipman, Laura C. Francoeur

United States Department of Agriculture Wildlife Services: Staff Publications

Semi-natural grassland habitat fragments, such as those found on airports, might be important for arthropod conservation and biodiversity in urban ecosystems. The objectives of this study were to: (1) describe the arthropod communities present within the grasslands on the John F. Kennedy International Airport and (2) assess spatial and temporal variation in those arthropod communities. We collected arthropods using a vacuum sampler during 2003 and using sweep-net collection methods during 2003 and 2004. During 2003, a total of 1,467 arthropods, representing 17 orders and 68 families were found in vacuum samples. A total of 3,784 arthropods, representing 12 orders and …

Lakewood Farm: The Private Zoo That The Public Loved, Geoffrey D. Reynolds

Faculty Publications

Lakewood Farm:  The Private Zoo That the Public Loved is an article concerning the private zoo in Holland, Michigan, that was owned by Chicago coal merchant George Fulmer Getz and helped form the Illionois based Brookfiekd Zoo and John Ball Zoo of Grand Rapids, Michigan.

Polychlorinated Biphenyl-Induced Endothelial Cell Dysfunction And Its Modulation By Dietary Lipids, Zuzana Majkova

University of Kentucky Doctoral Dissertations

Cardiovascular diseases are the number one cause of death in Western societies. Endothelial dysfunction is an early event in the pathology of atherosclerosis, which is an underlying cause in the majority of cardiovascular events. Exposure to persistent environmental pollutants, such as polychlorinated biphenyls (PCBs), is a risk factor for the development of atherosclerosis.

First, we tested a hypothesis that coplanar PCBs, dioxin-like chemicals with affinity for aryl hydrocarbon receptor (AhR), can stimulate up-regulation of monocyte chemoattractant protein-1 (MCP-1), an endothelium-derived chemokine that attracts monocytes into sub-endothelial space in early stages of atherosclerosis. Coplanar PCBs 77 and 126 increased expression of …

Survival And Inflammation In Patients With Heart Failure: The Impact Of Overweight, Obesity, Diabetes And Fruit And Vegetable Consumption, Heather Payne-Emerson

University of Kentucky Doctoral Dissertations

Overweight and obesity are paradoxically associated with better survival in patients with heart failure (HF). This association is poorly understood, in part because the impact of diabetes (DM) on survival of overweight and obese HF patients has not been considered. Inflammation may contribute to worse survival in overweight and obese HF patients with DM, and levels of inflammation may be associated with fruit and vegetable consumption. However, neither of these relationships has been investigated in patients with HF.

The purposes of this dissertation were to a) examine the effect of DM on survival of overweight and obese patients with HF, …

Biochemical Characterization Of Human Mismatch Recognition Proteins Mutsα And Mutsβ, Lei Tian

University of Kentucky Doctoral Dissertations

The integrity of an organism's genome depends on the fidelity of DNA replication and the efficiency of DNA repair. The DNA mismatch repair (MMR) system, which is highly conserved from prokaryotes to eukaryotes, plays an important role in maintaining genome stability by correcting base-base mismatches and insertion/deletion (ID) mispairs generated during DNA replication and other DNA transactions. Mismatch recognition is a critical step in MMR. Two mismatch recognition proteins, MutSα (MSH2-MSH6 heterodimer) and MutSβ (MSH2-MSH3 heterodimer), have been identified in eukaryotic cells. MutSα and MutSβ have partially overlapping functions, with MutSα recognizing primarily base-base mismatches and 1-2 nt ID mispairs …

15N Solid-State Nmr Detection Of Flavin Perturbation By H-Bonding In Models And Enzyme Active Sites, Dongtao Cui

University of Kentucky Doctoral Dissertations

Massey and Hemmerich proposed that the different reactivities displayed by different flavoenzymes could be achieved as a result of dominance of different flavin ring resonance structures in different binding sites. Thus, the FMN cofactor would engage in different reactions when it had different electronic structures. To test this proposal and understand how different protein sites could produce different flavin electronic structures, we are developing solid-state NMR as a means of characterizing the electronic state of the flavin ring, via the ¹⁵N chemical shift tensors of the ring N atoms. These provide information on the frontier orbitals. We propose that …

Role Of Group X Secretory Phospholipase A2 In Murine Adipocytes, Xia Li

University of Kentucky Doctoral Dissertations

The secretory phospholipase A₂ (sPLA₂) family is a group of enzymes that catalyze the hydrolysis of glycerophospholipids at the sn-2 position, generating free fatty acids and lysophospholipids. The sPLA₂ family has been implicated in various physiological and pathological activities. Eleven sPLA₂’s have been identified in mammals, and the function of each isoform likely reflects its tissue distribution and substrate specificity. Studies in vitro indicate that Group X (GX) sPLA₂ potently releases arachidonic acid (AA) and lysophosphatidylcholine from mammalian cell membranes. Interestingly, some of the biological effects mediated by GX sPLA₂ in vitro …

Streamflow Prediction Using Gis For The Kentucky River Basin, Bakkiyalakshmi Palanisamy

University of Kentucky Doctoral Dissertations

The study was aimed at developing a simple methodology for flow prediction in ungauged basins using existing data resources. For this purpose, the streamflow measurements across the Kentucky River Basin located in Kentucky, USA were obtained from United States Geological Survey (USGS) archive. The flow transferring characteristics of the subbasins of the Kentucky River Basin were obtained by combining downstream and upstream stream gauges. The flow transferring function thus derived were related to watershed, channel and flow characteristics of the subbasins by multiple regression analysis. The gauge pairs were divided into two classes of subbasins representing Upper and Lower Kentucky, …

Protection Against Endothelial Inflammation By Green Tea Flavonoids, Yuanyuan Zheng

University of Kentucky Doctoral Dissertations

Endothelial inflammation is a pivotal early event in the development of atherosclerosis. Long term exposure to cardiovascular risk factors will ultimately exhaust those protective anti-inflammatory factors such as the heme oxygenase (HO) system. The HO system plays a critical role in cellular and tissue self-defense against oxidative stress and inflammation. Caveolae are membrane domains and are particularly abundant in endothelial cells, where they are believed to play a major role in the regulation of endothelial vesicular trafficking as well as the uptake of lipids and related lipophilic compounds, possibly including bioactive food components such as flavonoids. Research in this dissertation …

Yersinia Pestis Virulence Factor Yopm Undermines The Function Of Distinct Ccr2+Gr1+ Cells In Spleen And Liver During Systemic Plague, Zhan Ye

University of Kentucky Doctoral Dissertations

Yersinia pestis, the infective agent of bubonic and pneumonic plague, is classified as a category A agent of bioterrorism. YopM, a protein toxin of Y. pestis, is necessary for full virulence in a systemic plague mouse model with ambient-temperature grown bacteria. We used this model to identify the cells undermined by YopM. Natural killer (NK) cells were previously reported to be lost in spleen and blood in a YopM-associated way; however, NK cell depletion was found not to occur in liver, and ablation of NK cells had no effect on bacterial growth, indicating that NK cells are redundant …

Explorations In Homeoviscous Adaptation And Mass Spectral Analysis Of Membrane Lipids, Michael Douglas Timmons

University of Kentucky Doctoral Dissertations

The focus of this dissertation is centered on the mass spectral analysis of lipids and changes occurring in keeping with the concept of homeoviscous adaptation [1]. Homeoviscous adaptation is the process of modification of membrane lipids in response to environmental stimuli [1]. Dissertation investigations applied this concept to prokaryotic and eukaryotic organisms, and expanded the perception of environmental factors from exogenous organic solvents to intracellular environment.

The field of lipidomics deals with the analysis of phospholipid and fatty acid components of membranes the changes that occur due to environmental stimuli and their biological significance [2-6]. The high sensitivity of mass …

Morphology And Systematics Of Braconid Wasps, Charles Andrew Boring

University of Kentucky Doctoral Dissertations

The following morphological structures of the ovipositor of Homolobus truncator (Say) (Hymenoptera : Braconidae) are described and hypotheses of their functions are proposed: a series of sharp ridges on the distal surface of the notch helps maintain a grip on the inner surface of the host cuticle; the sperone directs eggs away from the inner surface of the ventral valves; a flap-like structure on each ventral valve covers the portal through which eggs pass; the valvillus maintains position of the egg within the ovipositor and acts against the egg to force it out; ctenidia on the inner surface of the …

Evolutionary Perspective Of Nicotine To Nornicotine Conversion, Its Regulation And Characterization Of Ein2 Mediated Ethylene Signaling In Tobacco, Manohar Chakrabarti

University of Kentucky Doctoral Dissertations

Nicotine, nornicotine, anabasine and anatabine are four major alkaloids in tobacco, of which nicotine is predominant. In many tobacco cultivars and also in other Nicotiana species, nicotine is converted to nornicotine, which in turn gives rise to potent carcinogen NNN. Nicotine to nornicotine conversion via nicotine-N-demethylation is mediated by the CYP82E family of P450 enzymes. Tobacco (Nicotiana tabacum) converts in senescing leaves, while its diploid progenitors N.tomentosiformis and N.sylvestris convert in both green and senescing and only in senescing leaves, respectively. Previously it has been shown that N.tomentosiformis has different active conversion loci in green and senescing leaves. …

Characterization Of Soil Carbon Stabilization In Long-Term Row-Cropped Agro-Ecosystems, Soraya Patricia Alvarado-Ochoa

University of Kentucky Doctoral Dissertations

Soil organic matter (SOM) is a dynamic soil property, sensitive and responsive to many factors. The possibility of increasing soil carbon (C) sequestration by changing land use and management practices has been of great interest recently due to concerns with global changes in the atmospheric carbon dioxide (CO₂) balance. Nonetheless, as a result of the complex dynamics of SOM, there is still the need for SOM characterization procedures capable of monitoring SOM stabilization, taking into account all the factors involved.

This study characterized SOM stabilization as affected by management practices in three long-term field experiments, considering physical, chemical …

Dissecting The Biosyntheses Of Gilvocarcins And Ravidomycins, Madan Kumar Kharel

University of Kentucky Doctoral Dissertations

Gilvocarcin V (GV) and ravidomycin (RMV) exhibit excellent antitumor activities in the presence of near-UV light at low concentration maintaining a low in vivo cytotoxicity. Although, the exact molecular mechanism for in vivo actions of these antibiotics has yet to be determined, a [2+2] cycloaddition reaction of the vinyl side chain with DNA thymidine residues in addition to the inhibition of topoisomerase II and DNAhistone H3 cross-linking are reported for the GV’s mechanism of action. Such activities have made these molecules interesting candidates for the biosynthetic investigation to generate analogues with improved activity/solubility. Previous biosynthetic studies have suggested that the …

Analysis Of The Crmp Gene In Drosophila: Determining The Regulatory Role Of Crmp In Signaling And Behavior, Deanna Hardt Morris

University of Kentucky Doctoral Dissertations

The mammalian genome encodes five collapsin response mediator protein (CRMP) isoforms. Cell culture studies have shown that the CRMPs mediate growth cone dynamics and neuron polarity through associations with a variety of signal transduction components and cytoskeletal elements. CRMP is also a member of a protein family including the presumably ancestral dihydropyrimidinase (DHP) protein that catalyzes the second step in pyrimidine degradation. In Drosophila, CRMP and DHP proteins are produced by alternatively spliced transcripts of the CRMP gene. The alternative protein forms have a 91% sequence identity, but unique expression patterns. CRMP is found exclusively in neuronal tissues and …

Grazing Evaluation Of A Novel Endophyte Tall Fescue Developed For The Upper Transition Zone, Jennifer Michelle Johnson

University of Kentucky Doctoral Dissertations

A wild-type endophyte (Neotyphodium coenophialum [(Morgan-Jones & Gams) Glen Bacon & Hanlin]) that infects tall fescue [Lolium arundinaceum (Schreb.) Darbysh. = Schedonorous arundinaceum (Schreb.) Dumort.] imparts tolerances to moisture, heat, and grazing stresses, but also produces ergot alkaloids that adversely affect performance and physiology of cattle. Novel endophytes, developed by AgResearch Ltd. NZ, can sustain fescue persistence and productivity, but do not produce toxic ergot alkaloids. University of Kentucky Plant Breeder, T. D. Phillips Ph.D, developed a tall fescue experimental population (KYFA9301) for the upper transition zone. A 2-yr grazing experiment was conducted with steers to evaluate steer …

Evaluation And Enhancement Of Seed Lot Quality In Eastern Gamagrass [Tripsacum Dactyloides (L.) L.], Cynthia Hensley Finneseth

University of Kentucky Doctoral Dissertations

Eastern gamagrass [Tripsacum dactyloides (L.) L.] is a warm-season, perennial grass which is native to large areas across North America. Cultivars, selections and ecotypes suitable for erosion control, wildlife planting, ornamental, forage and biofuel applications are commercially available. Plantings are commonly established from seed; however, seed quality and dormancy are barriers to establishment. The objective here was to investigate parameters that contribute to inconsistent performance of this seed kind to subsequently improve seed lot quality.

Forty-two seed lots were used, with seed fill and germination potential ranging from 78- 100% and 11-91%, respectively. Actual germination and dormant seed ranged …

Improvement Of New Oil Crops For Kentucky, Watchareewan Jamboonsri

University of Kentucky Doctoral Dissertations

Three oil crops, chia (Salvia hispanica L.), flax (Linum usitatissimum L.), and castor (Ricinus communis L.), were studied because of their nutritional and industrial values. Chia and flax are rich in an ω3 fatty acid, α-linolenic acid, and castor is a very high oil producer and high in a hydroxy fatty acid. Ethyl methanesulfonate (EMS) and gamma rays were employed to mutagenize chia seeds to produce early flowering mutants. The M₁ population was grown and induced to flower by short-day photoperiods. The M₂ population was planted in the field in Lexington, KY in 2008. Early …

Modeling Water Use In Nursery Crops, Amy Fulcher

University of Kentucky Doctoral Dissertations

Water use is an important topic in the global agriculture community and is a critical input in nursery crop production. Several plants in the genus Cornus are important nursery crops. Not only are they economically relevant, they are found in grafted and seedling forms and parents and their hybrid are readily available in the trade, facilitating an assessment of water requirements. Anecdotal information suggests that Cornus taxa have differing stress tolerance and water use requirements. Research was conducted to characterize and model water use among Cornus taxa. Scanning electron microscopy and anatomy‐based micromorphological studies as well as transpiration chamber‐based studies …

Phylloplanins: Novel Antifungal Proteins On Plant Leaf Surfaces, Ryan William Shepherd

University of Kentucky Doctoral Dissertations

Secreted surface proteins are an innate immune defense component employed by animals to inhibit invading microbes. Surface proteins have not been documented in plants, even though the aerial leaf surface, or phylloplane, is a major site of pathogen ingress. We have discovered novel proteins, termed phylloplanins, which accumulate on leaf surfaces of Nicotiana tabacum, and we have isolated the gene Phylloplanin that is unique in gene databases. Natural and E. coli-expressed phylloplanins inhibit spore germination and limit leaf infection by the oomycete pathogen Peronospora tabacina.

We investigated the site of phylloplanin biosynthesis using biochemical techniques. These techniques …

Environmental Effects On Behavior And Physiology In Crayfish, Sonya M. Bierbower

University of Kentucky Doctoral Dissertations

Despite dramatic morphological differences between animals from different taxa, several important features in organization and sensory system processing are similar across animals. Because of this similarity, a number of different organisms including mammals, insects, and decapod crustaceans serve as valuable model systems for understanding general principles of environmental effects. This research examines intrinsic and extrinsic factors by behaviorally and physiologically means to identify the impact of environmental conditions on two distinct crayfish species- Procambarus clarkii (surface) and Orconectes australis packardi (cave).

The research identified behavioral and physiological responses in these two morphological and genetically distinct species. The studies also examined …

Methods For Disposing Non-Native Invasive Plants, Karen Bennett

UNH Cooperative Extension

No abstract provided.