Life Sciences Commons^™

The Relationship Between Light Physical Activity And 10-Year Weight Change In 2,868 U.S. Adults: A National Health And Nutrition Examination Survey Investigation, Chloe Diane Cory

Theses and Dissertations

The prevalence of obesity has steadily increased over the past several decades. About 13.4% of Americans aged 20-74 had obesity in 1960-1962 and the prevalence has steadily increased to 40.3% in 2021-2023--more than a 3-fold increase. PURPOSE: The aim of this study was to evaluate the relationship between time spent in light physical activity (LPA) and 10-year weight change in a random sample of 2868 women and men representative of the U.S. adult population. METHODS: Data were used from the National Health and Nutrition Examination Survey (NHANES) from the 2003-2006 data cycles. Participants were limited to non-pregnant U.S. …

Revision And Biogeography Of The Tribulus Group (Orthoptera, Acrididae, Melanoplinae, Melanoplus) And Establishment Of The Rusticus Group With A Description Of Four New Species Of West Of Mississippi River, Usa, Jireh Mwamukonda

Theses and Dissertations

The genus Melanoplus represents one of the most diverse groups of acridid grasshoppers in North America, comprising over 430 described species within the subfamily Melanoplinae. Among its various species groups, the Tribulus group consists of flightless grasshoppers typically found in open woodlands and forest margins, primarily in the eastern United States. The Melanoplus tribulus group was first established by Blatchley (1920) as Obovatipennis Group. However, since species groups are informal taxonomic units not governed by nomenclatural rules, the group later became known as the Tribulus group. It currently includes 11 taxa. These brachypterous species occur from New Jersey south Florida …

The Biology Of Green Antelopehorn Milkweed (Asclepias Viridis Walter) And Hemp Dogbane (Apocynum Cannabinum L.) And Response To Triclopyr Formulations And Other Auxin Herbicides, Kayla L. Broster

Theses and Dissertations

Studies were conducted in Oktibbeha and Clay Counties in Mississippi to determine the response of green antelopehorn milkweed and hemp dogbane to triclopyr and other auxin herbicides in non-cropland areas. These studies were conducted at four locations with well established populations for each species throughout 2020 to 2023, with applications repeated at each location the following year if populations persisted. Treatments included a high and low rate of each herbicide studied, with all four triclopyr formulations included for both species. Injury response data were collected two and four weeks after treatment and population density data were evaluated using individual stem …

Spatiotemporal Ecology Of Mycobacterium Ulcerans And Mycolactone Functions In French Guiana And Southeastern United States Aquatic Environments, Magdalene Dogbe

Theses and Dissertations

Mycobacterium ulcerans, the causative agent of Buruli ulcer, produces mycolactone, a polyketide toxin traditionally studied for its role in human pathogenesis. This dissertation presents a comprehensive spatiotemporal analysis of M. ulcerans and mycolactone producing mycobacteria (MPM) ecology in the Americas and also reveals mycolactone's role in the environment as a microbial community regulator. Through comparative studies in French Guiana (endemic) and the southeastern United States (non-endemic), combined with experimental microcosm investigations, this research contributes to environmental pathogen ecology understanding. Environmental surveillance across 2,226 samples from French Guiana revealed complete MPM restriction to freshwater environments, with zero detections from 1,226 coastal …

Evaluating The Effects Of Biostimulants On Apple Coloration, Patrick G. Owens

Theses and Dissertations

Apple peel color is one determining factor of apple quality and is a highly sought after trait by both growers and consumers. Historically plant growth regulators (PGRs) such as daminozide and auxins have been used to induce a greater amount of red color in the peel, but these products typically have negative production impacts and raise environmental concerns. One new area of interest is in called biostimulants. This study investigated the effects of two experimental biostimulants (MCEN1 and MCEN2) applied at varying rates and timings, as well as a commercially available plant growth regulator (Blush® 2X), on ‘Honeycrisp’ apple color …

Validation And Efficacy Of A Novel External Ankle Support Device For The Prevention Of Lateral Ankle Sprains, Sally Kennon Barfield

Theses and Dissertations

Ankle sprains are a common injury in sports and in life and can lead to debilitating consequences if not managed properly. Current prevention methods are limited to bracing or taping of the ankle. While these methods have been shown to help in mitigation of ankle sprains, associated issues such as performance decrements and discomfort have been noted in the currently available literature. The BetterGuards is a novel external ankle support that has been touted as the key to the issues presented by more traditional prevention methods. The purpose of this study was to determine both the effectiveness of the BetterGuards …

Sex Disparities In Prescription Opioids Associated Cardiovascular Adverse Events, Li Ma

Theses and Dissertations

The opioid crisis in the United States has evolved from a medical response to pain into a nationwide public health emergency. The prescription opioids (POs) – associated cardiovascular adverse events (CVAEs) remain insufficiently studied, especially in relation to sex disparities. This dissertation investigates sex disparities in PO-associated cardiovascular adverse events (CVAEs) through an analytic framework integrating artificial-intelligence-assisted literature mining and real-world pharmacovigilance analytics. In the analytic framework, first, AI powered topic modeling was employed to uncover POs-associated CVAEs risks with a focus on sex differences. A total of 1,837 PubMed abstracts were analyzed using two methods, Latent Dirichlet Allocation (LDA) …

Genomics Insights Into The Biogeography And Evolution Of Galapagos Iguanas Using Radseq And Wgseq Techniques, Cecilia Paradiso

Theses and Dissertations

The Galápagos archipelago is known for its unique endemic fauna shaped by isolation and geological dynamism. This thesis explores the evolutionary history of Galápagos iguanas, a monophyletic group comprising the marine iguana (Amblyrhynchus cristatus) and three land iguanas: Conolophus marthae, C. pallidus, and C. subcristatus. These species differ in distribu- tion, population size, and conservation status, with C. marthae classified as Critically Endan- gered due to its restricted range and small population. The main goal of this thesis is to fill knowledge gaps concerning the evolutionary trajectories, demographic histories, and genetic var- iability of Galápagos iguanas. The first chapter reconstructs …

Study Of Insect Frass-Associated Microbiome On Plant Growth And Their Potential Use As Biofertilizer, Jasmine Sahota

Theses and Dissertations

An increasing global food demand and the urgent need for sustainable agricultural practices have driven interest in insects as alternative feed and food sources. Insect frass, a by-product of insect rearing, represents a rich organic carbon source with diverse microbes that can enhance soil health and promote beneficial plant-microbe interactions. This study characterized the bacterial (16S-V4) and fungal (ITS2) microbiomes of frass from Black Soldier Fly (BSF) and Cricket species and evaluated their effects on maize (Zea mays) growth. Four frass variants were applied at rates of 56-280 kg ha⁻¹ in a pot experiment with untreated soil and mineral fertilizer …

Trace Mineral Supplementation Strategies For Beef Cattle During Preconditioning And Feedlot Receiving, Madeline G. Mcknight

Theses and Dissertations

Beef cattle routinely undergo a variety of stressors within the preconditioning and feedlot receiving phases which may impair animal performance and health. Trace mineral supplementation, either through dietary or injectable sources, is proposed to mitigate these effects through metabolic and immune system support. Two systematic reviews and meta-analyses were conducted to evaluate the efficacy of two different oral supplementation methods, organic (OTM) and inorganic (INR), and injectable trace mineral (ITM) solutions on average daily gain (ADG) and morbidity. Across 20 studies, OTM supplementation increased ADG (P = 0.01) when compared to INR, but did not affect morbidity (P = 0.92). …

Ecological Drivers Of Habitat Selection And Maternal Survival In Female Mule Deer (Odocoileus Hemionus), Brady R. Knight

Theses and Dissertations

Understanding the ecological and biological factors that influence habitat selection by mule deer (Odocoileus hemionus) is crucial for effective management. Mule deer select cover, forage, and water, each critical to energy acquisition and survival of mule deer. Here, we evaluate the factors that influence habitat selection and reproductive decisions by mule deer . In chapter one we evaluate the influence of treatments to restore quaking aspen (Populus tremuloides) on habitat selection by mule deer. We hypothesized that mule deer would not use habitats randomly because of variability in nutrition and perceived risk of predation. We predicted that areas with aspen …

Mitochondrial Insoluble Aggregates In Aging And Alzheimer’S Disease Models: Cross-Species Proteomic Integration, Identification Of Conserved Candidates, And Pharmacological Disruption Of Eef-2 Interactions, Sonu Pahal

Theses and Dissertations

Protein aggregation within mitochondria emerges early in both aging and Alzheimer’s disease (AD) and contributes to progressive loss of proteostasis. Insoluble mitochondrial aggregate fractions from Caenorhabditis elegans revealed extensive enrichment of metabolic and translational proteins that also appear in human Alzheimer hippocampal aggregates. Comparative analysis across age and genotype identified a conserved subset of aggregation-prone proteins, several of which cluster around elongation factor 2 (eEF-2), a regulator of ribosomal translocation and energy coupling. Cross-species integration defined a network in which eEF-2 links chaperones, metabolic enzymes, and RNA-binding proteins that co-aggregate in both human Alzheimer material and nematode models. Functional tests …

Unveiling The Genomic Blueprint Of Two Pantoea Agglomerans Phages: Lia And Yaegar As Emerging Members Of The Chaseviridae Family, Leslie M. Ewool

Theses and Dissertations

Bacteriophages represent an essential component of microbial ecosystems and a promising resource for biocontrol. This study presents a comprehensive comparative genomic and evolutionary characterization of two novel bacteriophages that infect Pantoea agglomerans, Lia and Yaegar, belonging to the Loessnervirus genus within the Chaseviridae family. Both Lia and Yaegar possess double-stranded DNA genomes of approximately 54 kb with 44.4% GC content and 82 predicted open reading frames (ORFs). Functional annotation revealed distinct modules for replication, structural assembly, and lysis, but no genes associated with lysogeny, antibiotic resistance, or virulence. Average nucleotide identity (ANI) analysis indicated over 96% similarity between Lia, Yaegar, …

Exploring The Growth Dynamics Of Streptococcus Mutans In Diverse Environmental Conditions, Vanessa Escudero

Theses and Dissertations

Dental caries, a prevalent oral health issue, is primarily associated with the growth of Streptococcus mutans, a Gram-positive bacterium that grows under various oral environments. The primary objective of this study was to evaluate the impact of different beverages and mechanical cleaning on the growth of S. mutans, which plays a crucial role in tooth decay. Using a nano-spectrophotometer we analyzed bacterial growth by constructing growth curves under different conditions, including exposure to cranberry juice, Hawaiian juice, and mechanical brushing.

The study was designed to mimic real-world oral conditions by testing S. mutans in four distinct environments. First, we established …

Pfos And Lung Injury: A Review Of Human And Experimental Evidence, Farzana Hakim

Theses and Dissertations

Human epidemiological research has shown the adverse health consequences of long-term accumulation of per- and polyfluoroalkyl substances (PFAS) in human tissue. Specifically, this review will examine the relationship between PFAS exposure, impaired immune system functioning, and an elevated risk of respiratory disease using both human and experimental data. Research on human populations indicates that children exposed to PFAS have lower levels of antibodies to vaccines; those children prenatally exposed to PFAS are more susceptible to upper respiratory infections; and that adult humans have a higher incidence of chronic obstructive pulmonary disease (COPD). Additionally, experimental studies demonstrate that PFOS and PFOA …

Characterizing The Germination Process And Establishing Best Practices For Seed Propagation Of Tamaulipan Thornscrub Species For Habitat Restoration, Saroj Dhakal

Theses and Dissertations

Tamaulipan thornscrub is an imperiled plant community of southern Texas and northeastern Mexico. Given its importance for biodiversity conservation, stakeholders have been involved in restoration programs using seedlings grown from wild seeds. However, stakeholders often report that insufficient seedling supply is a challenge. To address knowledge gaps in seed germination behavior limiting seedling production, this study was conducted on 18 Tamaulipan thornscrub species, identified by growers as difficult to germinate. Seeds of all studied species are orthodox except Amyris texana, which have recalcitrant properties. Nine species have physical dormancy that was successfully addressed with mechanical and/or chemical scarification. Other species …

Arthropod Communities Associated With Endangered Physaria Thamnophila (Zapata Bladderpod) And Its Nurse Plants, Cesar Adrian Hinojosa

Theses and Dissertations

Physaria thamnophila is a federally endangered plant whose associated arthropods are understudied and poorly understood. This study surveyed environmental conditions and the arthropod community within the Arroyo Ramirez Tract of the Lower Rio Grande Valley National Wildlife Refuge, assessed which environmental factors influenced the arthropod community, and sought arthropod taxa statistically associated with Physaria thamnophila. Sticky cards and pitfall traps were deployed for a 7 day period, and vacuum samplings occurred quarterly over the span of a year to collect arthropods that were identified to order and family level for Coleoptera, Hymenoptera, and Lepidoptera. Biotic and abiotic surveys were performed …

Collective Agency And Community Resilience Among Farmworkers In The Lower Rio Grande Valley, Angel Velazquez

Theses and Dissertations

This research assesses how farmworkers in the Lower Rio Grande Valley of Texas use everyday practices to build resilience and adapt to changes in their lives. I apply two interconnected theories, White’s (2017, 2019) framework of collective agency and community resilience and Castro and Sen’s (2022) framework of everyday adaptation actions, to study these practices. I conducted 19 semi-structured interviews with Latino farmworkers and professionals who work with local farmworker organizations in the Rio Grande Valley (RGV) of Texas. Interview transcripts were analyzed to determine if and how Latino farmworkers in the RGV can work towards community resilience and implement …

Determination Of An Effective Natural Boxelder Bug (Boisea Trivittata) Repellent, Reyna Chavez

Theses and Dissertations

This study investigates the use of ecofriendly repellant alternatives to pest management to control boxelder bugs (Boisea trivittata). This bug gathers by the thousands on warm surfaces of exterior suburban homes during early fall and late spring. I determined bug repellency to turmeric oil (Curcuma longa), catnip (Nepeta cataria), citronella (Cymbopogon nardus), and lavender (Lavandula angustifolia). The treatments consisted of essential oils containing 20% methanol. All treatments demonstrated repellency of Boxelder bugs. Citronella was the most effective and had the highest level of repellency range of 90-99%. Catnip was the least effective with a repellency range of 63-82%.

Clustering 24-Hour Ambulatory Blood Pressure Time Series With Dynamic Time Warping And Time Warp Edit Distance, John Knight

Theses and Dissertations

Ambulatory blood pressure monitoring (ABPM) captures dynamic circadian changes in blood pressure (BP) that are not reflected in static clinic readings. This study applied time-series clustering with two elastic distance measures—Dynamic Time Warping (DTW) and Time Warp Edit Distance (TWED)—to identify distinct phenotypes in 2,155 24-hour ABPM time series from participants in the Maracaibo Aging Study. DTW and TWED both yielded three clusters corresponding to non-dipping, moderate-dipping, and strong-dipping patterns. The non-dipping group showed elevated nighttime BP, associated with greater cardiovascular and cognitive risk, while the strong-dipping group was associated with higher education and younger age in baseline clinic measurements. …

Seagrass Preference Among Pinfish In The Lower Laguna Madre, Nathaniel Garza

Theses and Dissertations

Pinfish (Lagodon rhomboides) is a common estuarine fish species found from Massachusetts to the Yucatan, Mexico. As juveniles, pinfish spend a significant portion of their life in coastal seagrasses which provide both shelter from predators and food. Along the Texas coast, there are three major species of seagrass- turtle grass (Thalassia testudinum), manatee grass (Syringodium filiforme) and shoal grass (Halodule wrightii) that differ in structural complexity. The goal of this study was to determine if pinfish associate more with one seagrass species than the others. A year-long field study was completed using twelve sample sites in the Lower Laguna Madre, …

Bacillus Subtilis: A Bacterium That Can Potentially Degrade Low-Density Polyethylene (Ldpe) And Polyethylene Terephthalate (Pet), Migdalia Flores

Theses and Dissertations

The widespread application and disposal of plastics, such as low-density polyethylene (LDPE) and polyethylene terephthalate (PET), have raised significant environmental health concerns. Because of each plastic’s stability and durability, these plastics exhibit limited natural degradation in the environment. Recently, the environmentally friendly biodegradation of plastics by living microorganisms has attracted more attention, as they can assist in the natural degradation process. In this study, the bacterial strain Bacillus subtilis ATCC6051 was used to degrade LDPE and PET for 60 days. To measure the degradation of low-density (LDPE) and polyethylene terephthalate (PET), the dry weight was taken, and physical characteristics were …

Probing Prebiotic Rna Oligonucleotide Polymerization On A Mg-Fes Catalyst Using Microfluidics, Gabriella Garza

Theses and Dissertations

Non-enzymatic polymerization under aqueous conditions has long been viewed as unfavorable, due to product (H2O) inhibition in abiotic settings (Damer & Deamer, 2015); despite its efficiency in biology through ATP monomer activation. Geochemically sustained pH gradients may provide free energy for condensation of organic monomers (Martin & Russell, 2003). Here, we investigated a biologically analogous non-enzymatic mechanism for RNA oligomerization, by probing the catalytic properties of a Mg-rich FeS mineral under aqueous conditions. FeS minerals promote a diverse prebiotic reaction (Wächtershäuser, 1988) and would have precipitated at Hadean submarine hydrothermal systems (Sojo et al., 2016). Natural pH and redox gradients …

Population Structure Of Red Drum (Sciaenops Ocellatus (Linnaeus, 1766)) In Two Systems In The Northwestern Gulf Of Mexico, Sandra Antonia Leal

Theses and Dissertations

Red drum (Sciaenops ocellatus) are an economically significant species of fish inhabiting the Gulf of Mexico. There are limited studies assessing S. ocellatus population structure focused on the southern coast of Texas. A total of 1,008 fish were collected over one year on a quarterly basis at South Bay (SB) and Holly Beach (HB) in the Lower Laguna Madre (LLM) of Texas to assess population structure. Juvenile S. ocellatus utilize the water systems of the LLM as a nursery ground and were more abundant at SB (n = 718) than HB (n = 290). The most abundant age classes were …

Applicability Of Cementochronology To Estimate Season-Of-Death In Humans: Insights From Modern Documented Collections, Olga Ibarra-Sanchez

Theses and Dissertations

Dental cementum is characterized by lifelong deposition of alternating opaque annuli in fall/winter and translucent bands in spring/summer. This study aims to test the applicability of cementochronology to estimate season-of-death, by observing the properties of the last layer, with direct implications for forensic anthropology and bioarchaeology. The sample includes canine teeth from 146 adults (84 males, 62 females), age-at-death ranging from 20-97 years (mean=61.7 years, SD=18.6 years), from two contemporary skeletal collections. Of these individuals, 78 (53.4%) died in spring/summer and 68 (46.6%) died in fall/winter. Overall accuracy was low at 64.4% (94/146). Accuracy was higher for spring/summer deaths 100.0% …

Comparative Assessment Of Lower Limb Neuromusculoskeletal Activation And Joint Kinematics In Normal And Impaired Gait, Jack Ryan Schule

Theses and Dissertations

This thesis evaluates whether accessible and affordable technologies can provide clinically significant, quantifiable gait analysis comparable to traditional marker-based motion capture systems. Modern high-end systems offer excellent accuracy but remain financially and logistically inaccessible to many clinicians and researchers. To address this gap, a framework was developed using markerless pose estimation using the model, MediaPipe, inertial measurement units (IMUs) processed through an Extended Kalman Filter (EKF), and surface electromyography (sEMG) to measure joint kinematics and neuromuscular activity during gait. An experiment was performed where data was collected from participants with both normal gait and pathologies including: Osgood–Schlatter disease, Plica Band …

Testing Microscopic Approaches For Cementochronology In The 21st Century Identified Skeletal Collection, Portugal, Amando Luis Montalvo Jr.

Theses and Dissertations

Age-at-death estimation is a key component to the creation of a biological profile in forensic anthropology. Acellular extrinsic fiber cementum annulations have been shown to correlate with chronological age. Cementochronology examines this correlation through the sum of the alternating translucent bands and opaque annuli, and the age of eruption of a tooth. While several microscopy techniques have been used, there is no consensus on the most optimal. This study will assess the reliability, precision and accuracy of three microscopy techniques: Brightfield (BF), Phase Contrast (PC) and Differential Interference Contrast (DIC). PC was the most reliable (rTEM= 10.4%), the most precise …

The Unilateral Neuromuscular Effects Of Cross Education Eccentric-Focused Isokinetic Strength Training With Blood Flow Restriction In Sedentary And Recreationally Active Males, Bryan Mixumi

Theses and Dissertations

PURPOSE: The purpose of this study was to determine if BFR unilateral training protocols can elicit the same or greater cross-education effect as observed with HIGH protocols.

RESULTS: Significant time main effects and trained vs. untrained interactions revealed both training groups improved in isometric and isokinetic strength, work and power across limbs (P < 0.05). EMG analyses showed significant increases in vastus lateralis activation, with limb-specific neural adaptations but no group differences (P < 0.05) suggesting potential cross-education influence in the lower musculature.

CONCLUSION: With lower workloads, the BFR training protocols produced improvements in isometrics and isokinetic strength, work, power, and EMG that were comparable to those of the HIGH group across the trained and untrained limbs. The magnitude and limb-specific patterns varied across isometric, isokinetic, and EMG variables, but …

Benthic Infaunal Responses To Shoreline Restoration, Jessica Lauren Cline

Theses and Dissertations

In the age of increasing urban coastal sprawl, natural shorelines are being replaced by hard armoring structures, which result in the loss of valuable ecosystem services. Hybrid living shorelines, areas that include limited and less intensive armoring strategies paired with the integration of plants and other natural materials, present an opportunity to marry the need for more aggressive stabilization with the continued preservation of ecosystem functions and biological communities. This project uses benthic infauna to evaluate the success of a living shoreline installation in Palm Bay, Florida. The deployment features experimental treatments of breakwaters and red mangroves to explore how …

Navigating Structure, Function, And Stability: Bridging Immunotherapy And Protein Engineering In The Era Of Machine Learning, Christopher J. Haynie

Theses and Dissertations

The immune system is a remarkably adaptive network, yet it often fails to function optimally due to evasion strategies of pathogens or mutated cells. Many of these evasion strategies involve alterations in protein expression and function. Protein design is an area of computational biology with potential applications in improving protein function and therapeutic protein engineering. This thesis explores methods to enhance immune function and protein design across multiple scales, from molecular engineering of antibody fragments and chimeric antigen receptors (CARs) to cellular immune responses, and computational approaches for protein structure optimization. We characterize Thymidine Kinase 1-specific single-chain antibodies, highlighting both …