Life Sciences Commons^™

Effects Of Germline And Somatic Events In Candidate Brca-Like Genes On Breast-Tumor Signatures, Weston R. Bodily, Brian H. Shirts, Tom Walsh, Suleyman Gulsuner, Mary-Claire King, Alyssa Parker, Moom Roosan, Stephen R. Piccolo

Faculty Publications

Mutations in BRCA1 and BRCA2 cause deficiencies in homologous recombination repair (HR), resulting in repair of DNA double-strand breaks by the alternative non-homologous end-joining pathway, which is more error prone. HR deficiency of breast tumors is important because it is associated with better responses to platinum salt therapies and PARP inhibitors. Among other consequences of HR deficiency are characteristic somatic-mutation signatures and gene-expression patterns. The term “BRCA-like” (or “BRCAness”) describes tumors that harbor an HR defect but have no detectable germline mutation in BRCA1 or BRCA2. A better understanding of the genes and molecular events associated with tumors being …

Engineering And Application Of A Biosensor With Focused Ligand Specificity, Dennis Della Corte, Hugo L. Van Beek, Falk Syberg, Marcus Schallmey, Felix Tobola, Kai U. Cormann, Christine Schlicker, Philipp T. Baumann, Karin Krumbach, Sascha Sokolowsky, Connor J. Morris, Alexander Grünberger

Faculty Publications

Cell factories converting bio-based precursors to chemicals present an attractive avenue to a sustainable economy, yet screening of genetically diverse strain libraries to identify the best-performing whole-cell biocatalysts is a low-throughput endeavor. For this reason, transcriptional biosensors attract attention as they allow the screening of vast libraries when used in combination with fluorescence-activated cell sorting (FACS). However, broad ligand specificity of transcriptional regulators (TRs) often prohibits the development of such ultra-high-throughput screens. Here, we solve the structure of the TR LysG of Corynebacterium glutamicum, which detects all three basic amino acids. Based on this information, we follow a semi-rational engineering …

No Mow May Lawns Have Higher Pollinator Richness And Abundances: An Engaged Community Provides Floral Resources For Pollinators, Relena R. Ribbons, Israel Del Toro

Faculty Publications

No Mow May is a community science initiative popularized in recent years that encourages property owners to limit their lawn mowing practices during the month of May. The goal of No Mow May is to provide early season foraging resources for pollinators that emerge in the spring, especially in urban landscapes when few floral resources are available. We worked with the city council of Appleton, Wisconsin, USA. to allow No Mow May to take place in May 2020. Four hundred and thirty-five property owners registered for No Mow May in Appleton. We measured floral and bee richness and abundance in …

Elementary Classroom Teachers’ Self-Reported Use Of Movement Integration Products And Perceived Facilitators And Barriers Related To Product Use, Roddrick Dugger, Aaron Rafferty, Ethan Hunt, Michael W. Beets, Collin Andrew Webster, Brian Chen, Jeffrey Michael Rehling, Robert Glenn Weaver

Faculty Publications

Movement integration (MI) products are designed to provide children with physical activity during general education classroom time. The purpose of this study was to examine elementary classroom teachers’ self-reported use of MI products and subsequent perceptions of the facilitators of and barriers to MI product use. This study utilized a mixed-methods design. Elementary classroom teachers (n = 40) at four schools each tested four of six common MI products in their classroom for one week. Teachers completed a daily diary, documenting duration and frequency of product use. Following each product test, focus groups were conducted with teachers to assess facilitators …

Consequences Of Plume Encounter On Larval Fish Growth And Condition In The Gulf Of Mexico, Kelia E. Axler, Su Sponaugle, Frank Hernandez, Carla Culpepper, Robert K. Cowen

Faculty Publications

© Inter-Research 2020. Freshwater input into nearshore continental shelf waters from coastal river-estuarine plumes can greatly alter the physical and trophic environments experienced by fish larvae. However, the biological consequences of plume encounter on larval fish survival remain equivocal, largely due to the extreme variability of these systems but also because traditional sampling techniques alone are too coarse to effectively characterize the dynamic biophysical environment at spatiotemporal scales relevant to individual larvae. Using a multidimensional approach, we simultaneously collected in situ imagery and net samples of larval fishes and zooplankton from the Mobile Bay plume (Alabama, USA) and ambient continental …

Obesity Worsens Gulf War Illness Symptom Persistence Pathology By Linking Altered Gut Microbiome Species To Long-Term Gastrointestinal, Hepatic, And Neuronal Inflammation In A Mouse Model, Dipro Bose, Punnag Saha, Ayan Mondal, Brian Fanelli, Ratanesh K. Seth, Patricia Janulewicz, Kimberly Sullivan, Stephen Lasley, Ronnie Horner, Rita R. Colwell, Ashok K. Shetty, Nancy Klimas, Saurabh Chatterjee

Faculty Publications

Persistence of Gulf War illness (GWI) pathology among deployed veterans is a clinical challenge even after almost three decades. Recent studies show a higher prevalence of obesity and metabolic disturbances among Gulf War veterans primarily due to the existence of post-traumatic stress disorder (PTSD), chronic fatigue, sedentary lifestyle, and consumption of a high-carbohydrate/high-fat diet. We test the hypothesis that obesity from a Western-style diet alters host gut microbial species and worsens gastrointestinal and neuroinflammatory symptom persistence. We used a 5 month Western diet feeding in mice that received prior Gulf War (GW) chemical exposure to mimic the home phase obese …

Initial Establishment Success Of Five Forages In An East Texas Loblolly Pine (Pinus Taeda) Silvopasture, Michael Richard, Ken Farrish, Brian P. Oswald, Hans M. Williams, Michael Maurer

Faculty Publications

The establishment at the end of 1 year of five forages was evaluated in a loblolly pine (Pinus taeda L.) silvopasture system. The five forages were: ‘Pensacola” bahiagrass (Paspalum notatum Fluegge), “Texas Tough” bermudagrass (Cynodon dactylon L. Pers.), “Alamo” switchgrass (Panicum virgatum L.), “San Marcos” Eastern gamagrass (Tripsacum dactyloides L.), and a native mix containing 45% “Texas” little bluestem (Schizachyrium scoparium Michx Nash), 15% sand lovegrass (Eragrostis trichodes Nutt. L. Alph. Wood), 15% “Blackwell” switchgrass (Panicum virgatum L.), 10% “Lometa” indiangrass (Sorgastrum nutans L. Nash), 10% “Haskell” sideoats grama (Bouteloua …

Effects Of Experimental Lightgaps And Topography On Enrichment Plantings In A Central Amazonian Secondary Forest, Tony Vizcarra Bentos, Henrique E. M. Nascimento, Marisangela Dos Anjos Marisangela, G. Bruce Williamson

Faculty Publications

Enrichment plantings into secondary forest are an important option in restoring species diversity and ecosystem services. However, little attention has been given to environmental requirements for species performance. This study evaluated the effects of lightgaps and topographic position on the growth and survival of four native tree species (Pouteria caimito, Garcinia macrophylla, Dipteryx odorata and Cynometra bauhiniaefolia) planted into a 26-year old secondary forest originating from abandoned pastures in the central Amazon Basin. Artificial lightgaps and control plots under closed canopy were uniformly distributed on plateaus and bottomlands near water bodies. Seedlings were planted randomly into the plots and monitored …

Electronic-Cigarette Vehicles And Flavoring Affect Lung Function And Immune Responses In A Murine Model, Brittany N. Szafran, Rakeysha Pinkston, Zakia Perveen, Matthew K. Ross, Timothy Morgan, Daniel B. Paulsen, Arthur L. Penn, Barbara L. F. Kaplan, Alexandra Noel

Faculty Publications

The use of electronic nicotine delivery systems (ENDS), also known as electronic-cigarettes (e-cigs), has raised serious public health concerns, especially in light of the 2019 outbreak of e-cig or vaping product use-associated acute lung injury (EVALI). While these cases have mostly been linked to ENDS that contain vitamin E acetate, there is limited research that has focused on the chronic pulmonary effects of the delivery vehicles (i.e., without nicotine and flavoring). Thus, we investigated lung function and immune responses in a mouse model following exposure to the nearly ubiquitous e-cig delivery vehicles, vegetable glycerin (VG) and propylene glycol (PG), used …

Behavioral Strategies During Incubation Influence Nest And Female Survival Of Wild Turkeys, Ashley K. Lohr, James A. Martin, Gregory T. Wann, Bradley S. Cohen, Bret A. Collier, Michael J. Chamberlain

Faculty Publications

Females must balance physiological and behavioral demands of producing offspring with associated expenditures, such as resource acquisition and predator avoidance. Nest success is an important parameter underlying avian population dynamics. Galliforms are particularly susceptible to low nest success due to exposure of ground nests to multiple predator guilds, lengthy incubation periods, and substantive reliance on crypsis for survival. Hence, it is plausible that nesting individuals prioritize productivity and survival differently, resulting in a gradient of reproductive strategies. Fine-scale movement patterns during incubation are not well documented in ground-nesting birds, and the influence of reproductive movements on survival is largely unknown. …

Phyr: Anrpackage For Phylogenetic Species-Distribution Modelling In Ecological Communities, Daijiang Li, Russell Dinnage, Lucas A. Nell, Matthew R. Helmus, Anthony Ives

Faculty Publications

Model-based approaches are increasingly popular in ecological studies. A good example of this trend is the use of joint species distribution models to ask questions about ecological communities. However, most current applications of model-based methods do not include phylogenies despite the well-known importance of phylogenetic relationships in shaping species distributions and community composition. In part, this is due to a lack of accessible tools allowing ecologists to fit phylogenetic species distribution models easily. To fill this gap, therpackagephyr(pronounced fire) implements a suite of metrics, comparative methods and mixed models that use phylogenies to understand and predict community composition and other …

Quantifying Species Traits Related To Oviposition Behavior And Offspring Survival In Two Important Disease Vectors, Donald A. Yee, William C. Glasgow, Nnaemeka F. Ezeakacha

Faculty Publications

Animals with complex life cycles have traits related to oviposition and juvenile survival that can respond to environmental factors in similar or dissimilar ways. We examined the preference-performance hypothesis (PPH), which states that females lacking parental care select juvenile habitats that maximize fitness, for two ubiquitous mosquito species, Aedes albopictus and Culex quinquefasciatus. Specifically, we examined if environmental factors known to affect larval abundance patterns in the field played a role in the PPH for these species. We first identified important environmental factors from a field survey that predicted larvae across different spatial scales. We then performed two experiments, …

Tick-Borne Pathogens Shape The Native Microbiome Within Tick Vectors, Abdulsalam Adegoke, Deepak Kumar, Cailyn Bobo, Muhammad Imran Rashid, Aneela Zameer Durrani, Muhammad Sohail Sajid, Shahid Karim

Faculty Publications

© 2020 by the authors. Licensee MDPI, Basel, Switzerland. Ticks are blood-feeding arthropods and transmit a variety of medically important viral, bacterial, protozoan pathogens to animals and humans. Ticks also harbor a diverse community of microbes linked to their biological processes, such as hematophagy, and hence affect vector competence. The interactions between bacterial and/or protozoan pathogens and the tick microbiome is a black-box, and therefore we tested the hypothesis that the presence of a protozoan or bacterial pathogen will alter the microbial composition within a tick. Hence, this study was designed to define the microbial composition of two tick species, …

Draft Genome Sequences Of Six Strains Isolated From The Rhizosphere Of Wheat Grown In Cadmium-Contaminated Soil, Vira Hovorukha, Ankita Bhattacharyya, Olga Iungin, Hanna Tashyreva, Victoria Romanovska, Olesia Havyrliuk, Olena Bielikova, Claire Blackwell, Brian Burks, Cara Cothern, Jakia Elliott, Jonathan Hoover, Alexis Jones, Christian Leise, Linda Lowmiller, Ahmed Mohamed, Tiffany Mullen, Ethan Nettleton, Karshanda Polk, Benny Tran, Teresa Tran, Manuel Vega, Landon Ware, Emily Welch, Leandra Williams, Madison Woodward, Kaylin Young, Olga Mavrodi, Oleksandr Tashyrev, Dmitri Mavrodi

Faculty Publications

This study presents high-quality draft genome assemblies of six bacterial strains isolated from the roots of wheat grown in soil contaminated with cadmium. The results of this study will help to elucidate at the molecular level how heavy metals affect interactions between beneficial rhizobacteria and crop plants.

A Method To Measure The Partitioning Coefficient Of Volatile Organic Compounds In Nanoparticles, Guiying Rao, Jeonghyeon Ahn, Abigail Evans, Michelle Casey, Eric P. Vejerano

Faculty Publications

The partitioning behavior of volatile organic compounds (VOCs) into nanoparticles is less studied compared to those of semivolatile organic compounds (SVOCs) because of the lower concentration of the VOCs that is expected to partition into particles. One challenge in measuring the accurate partition coefficient of VOCs is quantifying their low mass fraction that sorbed on nanoparticles and differentiating them from the high VOC concentrations present in the gas-phase. Systematically characterizing the partitioning coefficient at a specific environmental condition is also difficult when sampling in the field. During field sampling, thermal and non-thermal issues such as sampling artifacts and non-equilibrium conditions …

Tlr Antagonism By Sparstolonin B Alters Microbial Signature And Modulates Gastrointestinal And Neuronal Inflammation In Gulf War Illness Preclinical Model, Dipro Bose, Ayan Mondal, Punnag Saha, Diana Kimono, Sutapa Sarkar, Ratanesh K. Seth, Patricia Janulewicz, Kimberly Sullivan, Ronnie Horner, Nancy Klimas, Mitzi Nagarkatti, Prakash Nagarkatti, Saurabh Chatterjee

Faculty Publications

The 1991 Persian Gulf War veterans presented a myriad of symptoms that ranged from chronic pain, fatigue, gastrointestinal disturbances, and cognitive deficits. Currently, no therapeutic regimen exists to treat the plethora of chronic symptoms though newer pharmacological targets such as microbiome have been identified recently. Toll-like receptor 4 (TLR4) antagonism in systemic inflammatory diseases have been tried before with limited success, but strategies with broad-spectrum TLR4 antagonists and their ability to modulate the host-microbiome have been elusive. Using a mouse model of Gulf War Illness, we show that a nutraceutical, derived from a Chinese herb Sparstolonin B (SsnB) presented a …

Exploiting Somatic Pirnas In Bemisia Tabaci Enables Novel Gene Silencing Through Rna Feeding, Mosharrof Mondal, Judith K. Brown, Alex Flynt

Faculty Publications

© This article is available under a Creative Commons License (Attribution 4.0 International, as described at https://creativecommons.org/licenses/by/4.0/). RNAi promises to reshape pest control by being nontoxic, biodegradable, and species specific. However, due to the plastic nature of RNAi, there is a significant variability in responses. In this study, we investigate small RNA pathways and processing of ingested RNAi trigger molecules in a hemipteran plant pest, the whitefly Bemisia tabaci. Unlike Drosophila, where the paradigm for insect RNAi technology was established, whitefly has abundant somatic piwi-associated RNAs (piRNAs). Long regarded as germline restricted, piRNAs are common in the …

Comparative Transcriptomics Of Rice Genotypes With Contrasting Responses To Nitrogen Stress Reveals Genes Influencing Nitrogen Uptake Through The Regulation Of Root Architecture, Prasanta K. Subudhi, Richard S. Garcia, Sapphire Coronejo, Ronald Tapia

Faculty Publications

The indiscriminate use of nitrogenous fertilizers continues unabated for commercial crop production, resulting in air and water pollution. The development of rice varieties with enhanced nitrogen use efficiency (NUE) will require a thorough understanding of the molecular basis of a plant's response to low nitrogen (N) availability. The global expression profiles of root tissues collected from low and high N treatments at different time points in two rice genotypes, Pokkali and Bengal, with contrasting responses to N stress and contrasting root architectures were examined. Overall, the number of differentially expressed genes (DEGs) in Pokkali (indica) was higher than in Bengal …

Evaluating The Implementation And Effectiveness Of The Switch-Ms: An Ecological, Multi-Component Adolescent Obesity Prevention Intervention, Senlin Chen, Richard R. Rosenkranz, Gabriella M. Mcloughlin, Spyridoula Vazou, Lorraine Lanningham-Foster, Douglas A. Gentile, David A. Dzewaltowski

Faculty Publications

Background: The purpose of this study was to evaluate the implementation and effectiveness of an ecological, multi-component adolescent obesity prevention intervention called School Wellness Integration Targeting Child Health-Middle School (SWITCH-MS).Methods: Following the effectiveness-implementation hybrid type 3 quasi-experimental design, seven middle schools (377 students) in Iowa, United States, were stratified into "experienced" (n= 3; 110 students) or "inexperienced" (n= 4; 267 students) groups to receive the 12-week SWITCH-MS intervention. To evaluate implementation, school informants (n= 10) responded to a survey and students completed behavioral tracking in the classroom on a website. For effectiveness evaluation, students in 6th, 7th, and 8th grades …

The "Challenge" Of Depletion: Why The Oyster Fishery Is Not Self-Regulating, Eric N. Powell, John M. Klinck, Leanne M. Poussard

Faculty Publications

© 2020 National Shellfisheries Association. All rights reserved. The possibility that the economics of the oyster fishery impose a self-limitation on overharvesting has been proffered on occasion. The inefficiency of harvesting by the fishery has been evaluated and estimates of the exploitation rate permissible under conditions of maximum sustainable yield have been obtained in previous studies. The question becomes to what extent does the inefficiency of harvest interact with the economics of the fishery to compromise ready detection of overfishing? This study explores the possibility that the constraint of economics on the fishery occurs at oyster exploitation rates that are …

Trans-Axonal Signaling In Neural Circuit Wiring, Olivia Spead, Fabienne E. Poulain

Faculty Publications

The development of neural circuits is a complex process that relies on the proper navigation of axons through their environment to their appropriate targets. While axon–environment and axon–target interactions have long been known as essential for circuit formation, communication between axons themselves has only more recently emerged as another crucial mechanism. Trans-axonal signaling governs many axonal behaviors, including fasciculation for proper guidance to targets, defasciculation for pathfinding at important choice points, repulsion along and within tracts for pre-target sorting and target selection, repulsion at the target for precise synaptic connectivity, and potentially selective degeneration for circuit refinement. This review outlines …

Discovery Of Exosomes From Tick Saliva And Salivary Glands Reveals Therapeutic Roles For Cxcl12 And Il-8 In Wound Healing At The Tick–Human Skin Interface, Wenshuo Zhou, Faizan Tahir, Joseph Che Yen Wang, Michael Woodson, Michael B. Sherman, Shahid Karim, Girish Neelakanta, Hameeda Sultana

Faculty Publications

© Copyright © 2020 Zhou, Tahir, Wang, Woodson, Sherman, Karim, Neelakanta and Sultana.Ticks secrete various anti-coagulatory, anti-vasoconstrictory, anti-inflammatory, and anti-platelet aggregation factors in their saliva at the bite site during feeding to evade host immunological surveillance and responses. For the first time, we report successful isolation of exosomes (small membrane-bound extracellular signaling vesicles) from saliva and salivary glands of partially fed or unfed ixodid ticks. Our data showed a novel role of these in vivo exosomes in the inhibition of wound healing via downregulation of C-X-C motif chemokine ligand 12 (CXCL12) and upregulation of interleukin-8 (IL-8). Cryo-electron microscopy (cryo-EM) analysis …

Laboratory Colonization By Dirofilaria Immitis Alters The Microbiome Of Female Aedes Aegypti Mosquitoes, Abdulsalam Adegoke, Erik Neff, Amie Geary, Montana Ciara Husser, Kevin Wilson, Shawn Michael Norris, Guha Dharmarajan, Shahid Karim

Faculty Publications

Background

The ability of blood-feeding arthropods to successfully acquire and transmit pathogens of medical and veterinary importance has been shown to be interfered with, or enhanced by, the arthropod’s native microbiome. Mosquitoes transmit viruses, protozoan and filarial nematodes, the majority of which contribute to the 17% of infectious disease cases worldwide. Dirofilaria immitis, a mosquito-transmitted filarial nematodes of dogs and cats, is vectored by several mosquito species including Aedes aegypti.

Methods

In this study, we investigated the impact of D. immitis colonization on the microbiome of laboratory reared female Ae. aegypti. Metagenomic analysis of the V3–V4 variable …

Initial Investigation Of Seasonal Flammability Of Three Invasive East Texas Forest Understory Fuels Using Thermogravimetric Analysis, Mike Tiller, Brian P. Oswald, Alyx Frantzen, Warren Conway, Ikuai Hung

Faculty Publications

East Texas forest understory fuels have become increasingly infested with invasive species which have contributed to greater hazardous fuel loads when combined with decades of fire exclusion and passive management. This study focused on estimating seasonal changes in flammability parameters of invasive yaupon (Ilex vomitoria), Chinese privet (Ligustrum sinense), and Chinese tallow (Triadica sebifera) using thermogravimetric analysis. Foliage and stem samples were collected in the dormant (February) and growing (August) seasons. Differential thermogravimetric (DTG) and proximate analyses were used to estimate species specific flammability parameters related to relative spontaneous ignition temperature (RSIT), gas-phase maximum …

Quantifying Spatiotemporal Variability In Zooplankton Dynamics In The Gulf Of Mexico With A Physical-Biogeochemical Model, Taylor A. Shropshire, Steven L. Morey, Eric P. Chassignet, Alexandra Bozec, Victoria J. Coles, Michael R. Landry, Rasmus Swalethorp, Glenn Zapfe, Michael R. Stukel

Faculty Publications

© 2020. This work is distributed under the Creative Commons Attribution 4.0 License. Zooplankton play an important role in global biogeochemistry, and their secondary production supports valuable fisheries of the world's oceans. Currently, zooplankton standing stocks cannot be estimated using remote sensing techniques. Hence, coupled physical–biogeochemical models (PBMs) provide an important tool for studying zooplankton on regional and global scales. However, evaluating the accuracy of zooplankton biomass estimates from PBMs has been a major challenge due to sparse observations. In this study, we configure a PBM for the Gulf of Mexico (GoM) from 1993 to 2012 and validate the model …

Lipocalin 2 Induces Neuroinflammation And Blood-Brain Barrier Dysfunction Through Liver-Brain Axis In Murine Model Of Nonalcoholic Steatohepatitis, Ayan Mondal, Dipro Bose, Punnag Saha, Sutapa Sarkar, Ratanesh K. Seth, Diana Kimono, Muayad Albadrani, Mitzi Nagarkatti, Prakash Nagarkatti, Saurabh Chatterjee

Faculty Publications

BACKGROUND:

Recent clinical and basic research implicated a strong correlation between NAFLD/NASH phenotypes with ectopic manifestations including neuroinflammation and neurodegeneration, but the mediators and critical pathways involved are not well understood. Lipocalin 2 (Lcn2) is one of the important mediators exclusively produced in the liver and circulation during NASH pathology.

METHODS:

Using murine model of NASH, we studied the role of Lcn2 as a potent mediator of neuroinflammation and neurodegeneration in NASH pathology via the liver-brain axis. RESULTS: Results showed that high circulatory Lcn2 activated 24p3R (Lipocalin2 receptor) in the brain and induced the release of high mobility group box …

A Letter To Reconsider The Conditions For Testing Decontaminated N95 Respirators For Emergency Reuse To Address Shortage, Eric P. Vejerano, Jeonghyeon Ahn

Faculty Publications

The battle with COVID-19 pandemic has resulted in the shortage of personal protective equipment, particularly, N95 respirators. Healthcare workers who reused N95 respirators may resort to unproven methods of cleaning/sterilization that can severely compromise the respirators’ filtration efficiency. A recently issued guideline will test decontaminated N95 respirators against particles with a median diameter of 0.075 ± 0.020 µm at a flow rate of 85 L min–1. For emergency reuse, these conditions may be too stringent. N95 respirators tested at this flow rate had predicted efficiencies of < 69%, assuming complete degradation of their electrostatic coating. Experimental efficiencies were ~15% lower. For emergency reuse, we recommend to either adjust the flow rate closer to normal breathing, or the size of the test particle should reflect that of virus-laden respiratory aerosols (~> 0.5 µm). By reconsidering the test conditions, a substantial fraction of used/decontaminated respirators can …

Light And Temperature Mediate Algal Simulation Of Heterotrophic Activity On Decomposing Leaf Litter, Cody A. Pope, Halvor M. Halvorson, Robert H. Findlay, Steven N. Francoeur, Kevin A. Kuehn

Faculty Publications

1. Recent evidence suggests that periphytic algae stimulate plant litter heterotrophs (fungi and bacteria) in the presence of light, but few studies have tested whether this stimulation varies across gradients of light, which may covary with temperature.
2. We exposed field‐conditioned Typha domingensis litter to fully‐crossed, short‐term gradients of temperature (15, 20, 25, and 30°C) and light (0, 25, 53, 123, and 388 µmol quanta m⁻² s⁻¹) and measured responses of litter‐associated algal, fungal, and bacterial production rates and β‐glucosidase, β‐xylosidase, and phenol oxidase enzyme activities in the laboratory.
3. Increased light stimulated algal production rates, from immeasurable production under …

Temporal And Stoichiometric Patterns Of Algal Stimulation Of Litter-Associated Heterotrophic Microbial Activity, Steven N. Francoeur, Robert K. Neely, Savannah Underwood, Kevin A. Kuehn

Faculty Publications

1. Periphyton communities associated with submerged plant detritus contain interacting autotrophic and heterotrophic microbes, and are sites of extracellular enzymatic activity. The strength and nature of these interactions might be expected to change over time as microbial communities develop on plant litter. Microbial interactions and enzymatic activity can be altered by nutrient availability, suggesting that litter stoichiometry could also affect these phenomena.
2. We grew wetland plants under ambient and nutrient‐enriched conditions to generate plant litter of differing nutrient content. In two experiments, we investigated: (1) the influence of algal photosynthesis on fungal and bacterial production and the activities of four extracellular …

The Arabidopsis Transcription Factor Aintegumenta Orchestrates Patterning Genes And Auxin Signaling In The Establishment Of Floral Growth And Form, Beth A. Krizek, Ivory C. Blakley, Yen Yi Ho, Nowlan Freese, Ann E. Loraine

Faculty Publications

Understanding how flowers form is an important problem in plant biology, as human food supply depends on flower and seed production. Flower development also provides an excellent model for understanding how cell division, expansion and differentiation are coordinated during organogenesis. In the model plant Arabidopsis thaliana, floral organogenesis requires AINTEGUMENTA (ANT) and AINTEGUMENTA-LIKE 6 (AIL6)/PLETHORA 3 (PLT3), two members of the Arabidopsis AINTEGUMENTA-LIKE/PLETHORA (AIL/PLT) transcription factor family. Together, ANT and AIL6/PLT3 regulate aspects of floral organogenesis, including floral organ initiation, growth, identity specification and patterning. Previously, we used RNA-Seq to identify thousands of genes with disrupted expression in ant ail6 …