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Articles 331 - 360 of 1771
Full-Text Articles in Life Sciences
Introduction To The Special Issue: The Role Of Seed Dispersal In Plant Populations: Perspectives And Advances In A Changing World, Noelle G. Beckman, Clare E. Aslan, Haldre S. Rogers
Introduction To The Special Issue: The Role Of Seed Dispersal In Plant Populations: Perspectives And Advances In A Changing World, Noelle G. Beckman, Clare E. Aslan, Haldre S. Rogers
Biology Faculty Publications
Despite the importance of seed dispersal as a driving process behind plant community assembly, our understanding of the role of seed dispersal in plant population persistence and spread remains incomplete. As a result, our ability to predict the effects of global change on plant populations is hampered. We need to better understand the fundamental link between seed dispersal and population dynamics in order to make predictive generalizations across species and systems, to better understand plant community structure and function, and to make appropriate conservation and management responses related to seed dispersal. To tackle these important knowledge gaps, we established the …
Energetic And Physical Limitations On The Breaching Performance Of Large Whales, Paolo S. Segre, Jean Potvin, David E. Cade, John Calambokidis, Jacopo Di Clemente, Frank E. Fish, Ari S. Friedlaender, William T. Gough, Shirel R. Kahane-Rapport, Claudia Oliveira, Susan E. Parks, Gwenith S. Penry, Malene Simon, Alison K. Stimpert, David N. Wiley, K. C. Bierlich, Peter T. Madsen, Jeremy A. Goldbogen
Energetic And Physical Limitations On The Breaching Performance Of Large Whales, Paolo S. Segre, Jean Potvin, David E. Cade, John Calambokidis, Jacopo Di Clemente, Frank E. Fish, Ari S. Friedlaender, William T. Gough, Shirel R. Kahane-Rapport, Claudia Oliveira, Susan E. Parks, Gwenith S. Penry, Malene Simon, Alison K. Stimpert, David N. Wiley, K. C. Bierlich, Peter T. Madsen, Jeremy A. Goldbogen
Biology Faculty Publications
The considerable power needed for large whales to leap out of the water may represent the single most expensive burst maneuver found in nature. However, the mechanics and energetic costs associated with the breaching behaviors of large whales remain poorly understood. In this study we deployed whale-borne tags to measure the kinematics of breaching to test the hypothesis that these spectacular aerial displays are metabolically expensive. We found that breaching whales use variable underwater trajectories, and that high-emergence breaches are faster and require more energy than predatory lunges. The most expensive breaches approach the upper limits of vertebrate muscle performance, …
A Positive Feedback Loop Of Hippo- And C-Jun-Amino-Terminal Kinase Signaling Pathways Regulates Amyloid-Beta-Mediated Neurodegeneration, Madison Irwin, Meghana Tare, Aditi Singh, Oorvashi Roy Puli, Neha Gogia, Matthew Riccetti, Prajakta Deshpande, Madhuri Kango-Singh, Amit Singh
A Positive Feedback Loop Of Hippo- And C-Jun-Amino-Terminal Kinase Signaling Pathways Regulates Amyloid-Beta-Mediated Neurodegeneration, Madison Irwin, Meghana Tare, Aditi Singh, Oorvashi Roy Puli, Neha Gogia, Matthew Riccetti, Prajakta Deshpande, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications
Alzheimer's disease (AD, OMIM: 104300) is an age-related disorder that affects millions of people. One of the underlying causes of AD is generation of hydrophobic amyloid-beta 42 (Aβ42) peptides that accumulate to form amyloid plaques. These plaques induce oxidative stress and aberrant signaling, which result in the death of neurons and other pathologies linked to neurodegeneration. We have developed a Drosophila eye model of AD by targeted misexpression of human Aβ42 in the differentiating retinal neurons, where an accumulation of Aβ42 triggers a characteristic neurodegenerative phenotype. In a forward deficiency screen to look for genetic modifiers, we identified a molecularly …
Carbonatites As Rock Fertilizers: A Review, James Mc Jones, Frédérique C. Guinel, Pedro M. Antunes
Carbonatites As Rock Fertilizers: A Review, James Mc Jones, Frédérique C. Guinel, Pedro M. Antunes
Biology Faculty Publications
Rock fertilizers are geological resources used in agriculture for their nutrient content, but slow weathering rates hinder their effectiveness. Carbonatites are igneous rocks made mostly of carbonate minerals with a relatively high weathering rate and often containing nutrient-bearing accessory minerals (e.g., apatite and biotite). Despite evidence supporting their potential as rock fertilizers, a comprehensive review of such data is missing in the literature. Furthermore, when studies on agricultural uses of carbonatites exist, they typically center on applied research aspects (i.e., “does it work?”) rather than on basic research aspects (i.e., “how does it work?”). Here we evaluate the applicability of …
Dramatic Dietary Shift Maintains Sequestered Toxins In Chemically Defended Snakes, Tatsuya Yoshida, Rinako Ujiie, Alan H. Savitzky, Teppei Jono, Takato Inoue, Naoko Yoshinaga, Shunsuke Aburaya, Wataru Aoki, Hirohiko Takeuchi, Li Ding, Qin Chen, Chengquan Cao, Tein-Shun Tsai, Anslem De Silva, Dharshani Mahaulpatha, Et Al.
Dramatic Dietary Shift Maintains Sequestered Toxins In Chemically Defended Snakes, Tatsuya Yoshida, Rinako Ujiie, Alan H. Savitzky, Teppei Jono, Takato Inoue, Naoko Yoshinaga, Shunsuke Aburaya, Wataru Aoki, Hirohiko Takeuchi, Li Ding, Qin Chen, Chengquan Cao, Tein-Shun Tsai, Anslem De Silva, Dharshani Mahaulpatha, Et Al.
Biology Faculty Publications
Unlike other snakes, most species of Rhabdophis possess glands in their dorsal skin, sometimes limited to the neck, known as nucho-dorsal and nuchal glands, respectively. Those glands contain powerful cardiotonic steroids known as bufadienolides, which can be deployed as a defense against predators. Bufadienolides otherwise occur only in toads (Bufonidae) and some fireflies (Lampyrinae), which are known or believed to synthesize the toxins. The ancestral diet of Rhabdophis consists of anuran amphibians, and we have shown previously that the bufadienolide toxins of frog-eating species are sequestered from toads consumed as prey. However, one derived clade, the Rhabdophis nuchalis Group, has …
Invasive Vegetation Affects Amphibian Skin Microbiota And Body Condition, Obed HernáNdez-GóMez, Allison Q. Byrne, Alex R. Gunderson, Thomas S. Jenkinson, Clay F. Noss, Andrew P. Rothstein, Molly C. Womack, Erica B. Rosenblum
Invasive Vegetation Affects Amphibian Skin Microbiota And Body Condition, Obed HernáNdez-GóMez, Allison Q. Byrne, Alex R. Gunderson, Thomas S. Jenkinson, Clay F. Noss, Andrew P. Rothstein, Molly C. Womack, Erica B. Rosenblum
Biology Faculty Publications
Invasive plants are major drivers of habitat modification and the scale of their impact is increasing globally as anthropogenic activities facilitate their spread. In California, an invasive plant genus of great concern is Eucalyptus. Eucalyptus leaves can alter soil chemistry and negatively affect underground macro- and microbial communities. Amphibians serve as excellent models to evaluate the effect of Eucalyptus invasion on ground-dwelling species as they predate on soil arthropods and incorporate soil microbes into their microbiotas. The skin microbiota is particularly important to amphibian health, suggesting that invasive plant species could ultimately affect amphibian populations. To investigate the potential for …
Ancyronyx Clisteri, A New Spider Riffle Beetle Species From Borneo, Redescription Of A. Sarawacensis Jäch Including A Description Of The Larva And New Distribution Data For A. Procerus Jäch Using Dna Barcodes (Coleoptera, Elmidae), Jan Kodada, Manfred A. Jach, Hendrik Freitag, Zuzana Čiamporová-Zaťovičová, Katarína Goffová, Dávid Selnekovič, Fedor Čiampor Jr
Ancyronyx Clisteri, A New Spider Riffle Beetle Species From Borneo, Redescription Of A. Sarawacensis Jäch Including A Description Of The Larva And New Distribution Data For A. Procerus Jäch Using Dna Barcodes (Coleoptera, Elmidae), Jan Kodada, Manfred A. Jach, Hendrik Freitag, Zuzana Čiamporová-Zaťovičová, Katarína Goffová, Dávid Selnekovič, Fedor Čiampor Jr
Biology Faculty Publications
Ancyronyx clisteri sp. nov. (Coleoptera, Elmidae) a new spider riffle beetle discovered from northern Borneo (Brunei; Sabah and Sarawak, Malaysia) and the larva of Ancyronyx sarawacensis Jäch are described. Illustrations of the habitus and diagnostic characters of the new species and the similar and highly variable A. sarawacensis are presented. Differences to closely related species, based on DNA barcodes and morphological characters, are discussed. Association of the larva and the imago of A. sarawacensis, and the occurrence of Ancyronyx procerus Jäch in Peninsular Malaysia and Sabah are confirmed by using COI mtDNA sequences.
In-Situ Gold–Ceria Nanoparticles: Superior Optical Fluorescence Quenching Sensor For Dissolved Oxygen, Nader Shehata, Ishac Kandas, Effat Samir
In-Situ Gold–Ceria Nanoparticles: Superior Optical Fluorescence Quenching Sensor For Dissolved Oxygen, Nader Shehata, Ishac Kandas, Effat Samir
Biology Faculty Publications
Cerium oxide (ceria) nanoparticles (NPs) have been proved to be an efficient optical fluorescent material through generating visible emission (~530 nm) under violet excitation. This feature allowed ceria NPs to be used as an optical sensor via the fluorescence quenching Technique. In this paper, the impact of in-situ embedded gold nanoparticles (Au NPs) inside ceria nanoparticles was studied. Then, gold–ceria NPs were used for sensing dissolved oxygen (DO) in aqueous media. It was observed that both fluorescence intensity and lifetime were changed due to increased concentration of DO. Added gold was found to enhance the sensitivity of ceria to DO …
Integrative Taxonomy Of The Genus Dudgeodes Sartori, 2008 (Insecta, Ephemeroptera, Teloganodidae) From The Philippines With Description Of New Species And Supplementary Descriptions Of Southeast Asian Species, Jhoana M. Garces, Michel Sartori, Hendrik Freitag
Integrative Taxonomy Of The Genus Dudgeodes Sartori, 2008 (Insecta, Ephemeroptera, Teloganodidae) From The Philippines With Description Of New Species And Supplementary Descriptions Of Southeast Asian Species, Jhoana M. Garces, Michel Sartori, Hendrik Freitag
Biology Faculty Publications
COI sequences were used as an initial clustering method to delimit putative species of the genus Dudgeodes in the Philippines. An overview of the diagnostic characters of Philippine species and characters with high intraspecific variability are given. Six new species of Dudgeodes are described and illustrated: D. bauernfeindi Garces & Sartori, sp. nov., D. freitagi Garces & Sartori, sp. nov., D. luntian Garces & Sartori, sp. nov., D. pangantihoni Garces & Sartori, sp. nov., D. tabang Garces & Sartori, sp. nov., and D. vonrinteleni Garces & Sartori, sp. nov., all known from the nymphal stage. Supplementary descriptions are provided for …
Spatiotemporal Variability In Allee Effects Of Invading Gypsy Moth Populations, Jonathan A. Walter, Kristine L. Grayson, Laura M. Blackburn, Patrick C. Tobin, Derek M. Johnson
Spatiotemporal Variability In Allee Effects Of Invading Gypsy Moth Populations, Jonathan A. Walter, Kristine L. Grayson, Laura M. Blackburn, Patrick C. Tobin, Derek M. Johnson
Biology Faculty Publications
The Allee threshold, the critical population density separating growth from decline in populations experiencing strong Allee effects, can vary over space and time but few empirical studies have examined this variation. A lack of geographically extensive, long-term studies on low density population dynamics makes studying variability in Allee effects difficult. We used North American gypsy moth population data from 1996-2016 to quantify Allee thresholds in 11 regions of the invasion front. Allee thresholds spanned a continuum from being undetectable due to strong population growth at all densities, to being unmeasurable because populations declined across all densities. The lag-1 temporal autocorrelation …
The Effects Of Dietary Linoleic Acid And Hydrophilic Antioxidants On Basal, Peak, And Sustained Metabolism In Flight‐Trained European Starlings, Wales A. Carter, Kristen J. Demoranville, Barbara J. Pierce, Scott R. Mcwilliams
The Effects Of Dietary Linoleic Acid And Hydrophilic Antioxidants On Basal, Peak, And Sustained Metabolism In Flight‐Trained European Starlings, Wales A. Carter, Kristen J. Demoranville, Barbara J. Pierce, Scott R. Mcwilliams
Biology Faculty Publications
Dietary micronutrients have the ability to strongly influence animal physiology and ecology. For songbirds, dietary polyunsaturated fatty acids (PUFAs) and antioxidants are hypothesized to be particularly important micronutrients because of their influence on an individual's capacity for aerobic metabolism and recovery from extended bouts of exercise. However, the influence of specific fatty acids and hydrophilic antioxidants on whole‐animal performance remains largely untested. We used diet manipulations to directly test the effects of dietary PUFA, specifically linoleic acid (18:2n6), and anthocyanins, a hydrophilic antioxidant, on basal metabolic rate (BMR), peak metabolic rate (PMR), and rates of fat catabolism, lean catabolism, and …
Humanized Nog Mice For Intravaginal Hiv Exposure And Treatment Of Hiv Infection, Anna Halling Folkmar Andersen, Stine Sofie Frank Nielsen, Rikka Olesen, Katharine Mack, Frederik Dagnæs-Hansen, N. Uldbjerg, Lars Østergaard, Ole S. Søgaard, Paul Denton, Martin Tolstrup
Humanized Nog Mice For Intravaginal Hiv Exposure And Treatment Of Hiv Infection, Anna Halling Folkmar Andersen, Stine Sofie Frank Nielsen, Rikka Olesen, Katharine Mack, Frederik Dagnæs-Hansen, N. Uldbjerg, Lars Østergaard, Ole S. Søgaard, Paul Denton, Martin Tolstrup
Biology Faculty Publications
Humanized mice provide a sophisticated platform to study human immunodeficiency virus (HIV) virology and to test antiviral drugs. This protocol describes the establishment of a human immune system in adult NOG mice. Here, we explain all the practical steps from isolation of umbilical cord blood derived human CD34+ cells and their subsequent intravenous transplantation into the mice, to the manipulation of the model through HIV infection, combination antiretroviral therapy (cART), and blood sampling. Approximately 75,000 hCD34+ cells are injected intravenously into the mice and the level of human chimerism, also known as humanization, in the peripheral blood is estimated longitudinally …
Investigating The Relationship Between Corticosterone And Glucose In A Reptile, Lorin A. Neuman-Lee, Spencer B. Hudson, Alison C. Webb, Susannah S. French
Investigating The Relationship Between Corticosterone And Glucose In A Reptile, Lorin A. Neuman-Lee, Spencer B. Hudson, Alison C. Webb, Susannah S. French
Biology Faculty Publications
The glucocorticoid hormone corticosterone (CORT) has classically been used in ecophysiological studies as a proxy for stress and energy mobilization, but rarely are CORT and the energy metabolites themselves concurrently measured. To examine CORT's role in mobilizing glucose in a wild reptile, we conducted two studies. The first study measured natural baseline and stress-induced blood-borne CORT and glucose levels in snakes during spring emergence and again when snakes return to the denning sites in autumn. The second study manipulated the hypothalamic–pituitary–adrenal (HPA) axis in male snakes in the autumn by taking a baseline blood sample, then subjecting individuals to one …
Resistance And Resilience Of Virgin Islands Bird Populations Following Severe Hurricanes, Robert A. Askins, David N. Ewert
Resistance And Resilience Of Virgin Islands Bird Populations Following Severe Hurricanes, Robert A. Askins, David N. Ewert
Biology Faculty Publications
We analyzed changes in abundance of terrestrial birds on St. John, U.S. Virgin Islands, for a 32 year period during which 3 major hurricanes occurred. Using 1987 as a baseline year, because it followed a 27 year hiatus when no major hurricanes hit the island, we assessed the impact of hurricanes on vegetation structure and bird populations. Bird abundance was determined for 25 m radius circular plots that were surveyed each year of the study along the same transects. Percent cover of trees, shrubs, and herbs was measured in each plot in 1987, 1990, and 2019. All of the survey …
An Evaluation Of Availability And Adequacy Of Multi-Hazard Early Warning Systems In Asian Countries: A Baseline Study, Ignacio Aguirre-Ayerbe, Maria Merino, Seinn Lei Aye, Ranjith Dissanayake, Fathmath Shadiya, Crisanto M. Lopez
An Evaluation Of Availability And Adequacy Of Multi-Hazard Early Warning Systems In Asian Countries: A Baseline Study, Ignacio Aguirre-Ayerbe, Maria Merino, Seinn Lei Aye, Ranjith Dissanayake, Fathmath Shadiya, Crisanto M. Lopez
Biology Faculty Publications
Early warning systems are widely considered as one of the more important aspects to reduce the impacts and consequences that hazardous natural events pose to societies. Similar to the other terms related to disaster risk reduction, this concept has evolved over time to eventually result in a comprehensive framework, that includes features from the upstream phase, such as detection and forecasting tools and models, to the downstream phase that considers a people-centred approach.
Based on this holistic conceptual framework, this paper attempts to assess the degree of adequacy and integration of early warning systems with reference to international standards using …
In Memoriam: Ignacio Ribera (1963–2020), Emmanuel D. Delocado, Michael Balke, Hendrik Freitag
In Memoriam: Ignacio Ribera (1963–2020), Emmanuel D. Delocado, Michael Balke, Hendrik Freitag
Biology Faculty Publications
No abstract provided.
A New Genus Of Baetidae (Insecta, Ephemeroptera) From Southeast Asia, Thomas Kaltenbach, Jhoana M. Garces, Jean-Luc Gattolliat
A New Genus Of Baetidae (Insecta, Ephemeroptera) From Southeast Asia, Thomas Kaltenbach, Jhoana M. Garces, Jean-Luc Gattolliat
Biology Faculty Publications
A new genus of Baetidae is described from Southeast Asia, Procerobaetis gen. nov. It has a wide distribution reaching from Indonesia (Sumatra) to the Philippines. Two new species are described from Indonesia, P. leptobranchius gen. et sp. nov. and P. petersorum gen. et sp. nov., and one new species from the Philippines, P. freitagi gen. et sp. nov. Procerobaetis gen. nov. is characterized by having seven pairs of elongate, apically pointed gills. At least gills I and II are very slender with strongly extended points, which is unique in Baetidae. Similar gills were described from Leptophlebiidae. Procerobaetis gen. nov. is …
Wild Geranium, Geranium Maculatum, 2020 Virginia Wildflower Of The Year, W. John Hayden
Wild Geranium, Geranium Maculatum, 2020 Virginia Wildflower Of The Year, W. John Hayden
Biology Faculty Publications
Geranium maculatum was named by Linnaeus in his monumental Species Plantarum, published in1753. Geranium has long served as the type genus of Geraniaceae. The genus and family name are derived from the Greek word geranos, crane, in reference to the elongate fruiting styles common throughout the family. English common names like Cranesbill and Storksbill for relatives of Wild Geranium similarly refer to their elongate fruiting-stage styles. The species portion of the binomial, maculatum, means spotted, perhaps a reference to slight irregularities in petal pigmentation sometimes observed in this species.
Measuring Functional Brain Recovery In Regenerating Planarians By Assessing The Behavioral Response To The Cholinergic Compound Cytisine, Oné R. Pagán, Debra L. Baker, Sean Deats, Mary O'Brien, Rochelle Dymond, Gabriella Demichele
Measuring Functional Brain Recovery In Regenerating Planarians By Assessing The Behavioral Response To The Cholinergic Compound Cytisine, Oné R. Pagán, Debra L. Baker, Sean Deats, Mary O'Brien, Rochelle Dymond, Gabriella Demichele
Biology Faculty Publications
Planarians are traditional model invertebrates in regeneration and developmental biology research that also display a variety of quantifiable behaviors useful to screen for pharmacologically active compounds. One such behavior is the expression of seizure-like movements (pSLMs) induced by a variety of substances. Previous work from our laboratory showed that cocaine, but not nicotine, induced pSLMs in intact but not decapitated planarians. Interestingly, as decapitated planarians regenerated their heads, they gradually recovered their sensitivity to cocaine. These results suggested a method to assess planarian brain regeneration and a possible way of identifying compounds that could enhance or hold back brain regeneration. …
Characterisation Of Carbapenem-Resistant Gram-Negative Organisms From Clinical Specimens In Yola, Nigeria, Shuwaram A. Shettima, Isabella A. Tickler, Caitlin M. Dela Cruz, Fred C. Tenover
Characterisation Of Carbapenem-Resistant Gram-Negative Organisms From Clinical Specimens In Yola, Nigeria, Shuwaram A. Shettima, Isabella A. Tickler, Caitlin M. Dela Cruz, Fred C. Tenover
Biology Faculty Publications
Objectives: This study aimed to identify carbapenem-resistant Gram-negative bacteria from clinical specimens of patients in Yola, Nigeria.
Methods: Routine clinical specimens were screened for the presence of carbapenem-resistant Gramnegative bacteria using chromogenic agar plates. Susceptibility of all presumptive isolates to carbapenems was tested by MIC and disk diffusion methods. Real-time PCR was used to test for the presence of carbapenemase genes.
Results: Screening of 1741 clinical specimens yielded 119 (6.8%) presumptive carbapenem-resistant Gram-negative bacteria. Antimicrobial susceptibility testing confirmed carbapenem resistance in 105 of these isolates. New Delhi metallo-β-lactamase (blaNDM) gene was detected in 26 isolates and Verona integron-encoded metallo-β-lactamase (bla …
Dietary Antioxidants Attenuate The Endocrine Stress Response During Long-Duration Flight Of A Migratory Bird, Stefania Casagrande, Kristen J. Demoranville, Lisa Trost, Barbara J. Pierce, Amadeusz Bryła, Maciej Dzialo, Edyta T. Sadowska, Ulf Bauchinger, Scott R. Mcwilliams
Dietary Antioxidants Attenuate The Endocrine Stress Response During Long-Duration Flight Of A Migratory Bird, Stefania Casagrande, Kristen J. Demoranville, Lisa Trost, Barbara J. Pierce, Amadeusz Bryła, Maciej Dzialo, Edyta T. Sadowska, Ulf Bauchinger, Scott R. Mcwilliams
Biology Faculty Publications
Glucocorticoids (GCs) are metabolic hormones that promote catabolic processes, which release stored energy and support high metabolic demands such as during prolonged flights of migrating birds. Dietary antioxidants (e.g. anthocyanins) support metabolism by quenching excess reactive oxygen species produced during aerobic metabolism and also by activating specific metabolic pathways. For example, similar to GCs’ function, anthocyanins promote the release of stored energy, although the extent of complementarity between GCs and dietary antioxidants is not well known. If anthocyanins complement GCs functions, birds consuming anthocyanin-rich food can be expected to limit the secretion of GCs when coping with a metabolically challenging …
Seed‐To‐Seedling Transitions Exhibit Distance‐Dependent Mortality But No Strong Spacing Effects In A Neotropical Forest, Philippe Marchand, Liza S. Comita, S. Joseph Wright, Richard Condit, Stephen P. Hubbell, Noelle G. Beckman
Seed‐To‐Seedling Transitions Exhibit Distance‐Dependent Mortality But No Strong Spacing Effects In A Neotropical Forest, Philippe Marchand, Liza S. Comita, S. Joseph Wright, Richard Condit, Stephen P. Hubbell, Noelle G. Beckman
Biology Faculty Publications
Patterns of seed dispersal and seed mortality influence the spatial structure of plant communities and the local coexistence of competing species. Most seeds are dispersed in proximity to the parent tree, where mortality is also expected to be the highest, because of competition with siblings or the attraction of natural enemies. Whereas distance‐dependent mortality in the seed‐to‐seedling transition was often observed in tropical forests, few studies have attempted to estimate the shape of the survival‐distance curves, which determines whether the peak of seedling establishment occurs away from the parent tree (Janzen–Connell pattern) or if the peak attenuates but remains at …
The Biosorption Of Lead From Aqueous Solutions By A Wood-Immobilized Fungal Biosorbent, Zomesh A N Maini, Niña Therese B. Flores, Enrico P. Muñoz
The Biosorption Of Lead From Aqueous Solutions By A Wood-Immobilized Fungal Biosorbent, Zomesh A N Maini, Niña Therese B. Flores, Enrico P. Muñoz
Biology Faculty Publications
Lead [Pb(II)] biosorption capacities of immobilized Talaromyces macrosporus on Moringa oleifera L. wood were compared against pure fungal and pure M. oleifera biomass. A Pb(II) contact test of 1000 ug/mL show similar Pb(II) removal of non-immobilized fungal biomass (F) and powdered wood colonized with fungi (WP+F), with WP+F producing more biomass. Powdered sorbents had higher Pb(II) uptake compared to whole sorbents analyzed through ICP-AES, possibly due to increased surface area for Pb(II) binding. FTIR analysis of the F, WP, and WP+F identified hydroxyl, amino, carbonyl, and sulfhydryl functional groups which constitute probable Pb(II)-affinitive binding sites. The biosorbents tested in a …
Assessment Of Cytotoxic Activity Of Five Common Philippine Medicinal Plants Using Brine Shrimp Lethality Assay, Lloyd O. Balinado, Merab A. Chan
Assessment Of Cytotoxic Activity Of Five Common Philippine Medicinal Plants Using Brine Shrimp Lethality Assay, Lloyd O. Balinado, Merab A. Chan
Biology Faculty Publications
A wide variety of plants in the Philippines are used to address several medical ailments; however, many of which have not yet undergone thorough pharmacological studies. The problem on the possible side effects caused by these medicinal preparations has, therefore, increased the interest in validating their safety for human use. The present study was conducted to determine the cytotoxicity of five common local medicinal plants. Annona muricata L., Cymbopogon citratus DC., Graptophyllum pictum (L.) Griff, Jatropha curcas L., and Piper betle L. were selected and subjected to crude aqueous leaf extraction. Extracts were then investigated for cytotoxicity potential using brine …
Variations In Tetrodotoxin Levels In Populations Of Taricha Granulosa Are Expressed In The Morphology Of Their Cutaneous Glands, Pedro Luiz Mailho-Fontana, Carlos Jared, Marta Maria Antoniazzi, Juliana Mozer Sciani, Daniel Carvalho Pimenta, James P. Strange, Taran Grant, Edmund D. Brodie Jr., Edmund D. Brodie Jr.
Variations In Tetrodotoxin Levels In Populations Of Taricha Granulosa Are Expressed In The Morphology Of Their Cutaneous Glands, Pedro Luiz Mailho-Fontana, Carlos Jared, Marta Maria Antoniazzi, Juliana Mozer Sciani, Daniel Carvalho Pimenta, James P. Strange, Taran Grant, Edmund D. Brodie Jr., Edmund D. Brodie Jr.
Biology Faculty Publications
Tetrodotoxin (TTX), one of the most toxic substances in nature, is present in bacteria, invertebrates, fishes, and amphibians. Marine organisms seem to bioaccumulate TTX from their food or acquire it from symbiotic bacteria, but its origin in amphibians is unclear. Taricha granulosa can exhibit high TTX levels, presumably concentrated in skin poison glands, acting as an agent of selection upon predatory garter snakes (Thamnophis). This co-evolutionary arms race induces variation in T. granulosa TTX levels, from very high to undetectable. Using morphology and biochemistry, we investigated differences in toxin localization and quality between two populations at the extremes …
The Effects Of Ship Wakes In The Venice Lagoon And Implications For The Sustainability Of Shipping In Coastal Waters, Gian Marco Scarpa, Luca Zaggia, Giorgia Manfe, Giuliano Lorenzetti, Kevin E. Parnell, Tarmo Soomere, John Rapaglia, Emanuela Molinaroli
The Effects Of Ship Wakes In The Venice Lagoon And Implications For The Sustainability Of Shipping In Coastal Waters, Gian Marco Scarpa, Luca Zaggia, Giorgia Manfe, Giuliano Lorenzetti, Kevin E. Parnell, Tarmo Soomere, John Rapaglia, Emanuela Molinaroli
Biology Faculty Publications
We analyse the impact of ship traffic in the vicinity of navigation channels in a wide shallow waterbody. The crucial hydrodynamic driver in this situation is the depression (Bernoulli) wake that may be transferred into a long-living solitary wave of depression over the shoals. The analysis considers navigation channels in the Venice Lagoon using a new large dataset of approximately 600 measured wake events associated to specific ships whose data are provided by the AIS system. Since the development of the modern industrial port and the opening of the Malamocco–Marghera channel in the late 1960s, growing pressure on the lagoon …
Autophagy Protein Nrbf2 Has Reduced Expression In Alzheimer's Brains And Modulates Memory And Amyloid-Beta Homeostasis In Mice, Veronik Lachance, Qian Wang, Eric Sweet, Insup Choi, Cui-Zan Cai, Xu-Xu Zhuang, Jessica Li Jiang, Robert D. Blitzer, Ozlem Bozdagi-Gunal, Bin Zhang, Jia-Hong Lu, Zhenyu Yue
Autophagy Protein Nrbf2 Has Reduced Expression In Alzheimer's Brains And Modulates Memory And Amyloid-Beta Homeostasis In Mice, Veronik Lachance, Qian Wang, Eric Sweet, Insup Choi, Cui-Zan Cai, Xu-Xu Zhuang, Jessica Li Jiang, Robert D. Blitzer, Ozlem Bozdagi-Gunal, Bin Zhang, Jia-Hong Lu, Zhenyu Yue
Biology Faculty Publications
Background Dysfunctional autophagy is implicated in Alzheimer's Disease (AD) pathogenesis. The alterations in the expression of many autophagy related genes (ATGs) have been reported in AD brains; however, the disparity of the changes confounds the role of autophagy in AD. Methods To further understand the autophagy alteration in AD brains, we analyzed transcriptomic (RNAseq) datasets of several brain regions (BA10, BA22, BA36 and BA44 in 223 patients compared to 59 healthy controls) and measured the expression of 130 ATGs. We used autophagy-deficient mouse models to assess the impact of the identified ATGs depletion on memory, autophagic activity and amyloid-beta (A …
Thermal Stress Responses Of Sodalis Glossinidius, An Indigenous Bacterial Symbiont Of Hematophagous Tsetse Flies, Jose Santinni Roma, Shaina D’Souza, Patrick J. Somers, Leah F. Cabo, Ruhan Farsin, Serap Aksoy, Laura J. Runyen-Janecky, Brian L. Weiss
Thermal Stress Responses Of Sodalis Glossinidius, An Indigenous Bacterial Symbiont Of Hematophagous Tsetse Flies, Jose Santinni Roma, Shaina D’Souza, Patrick J. Somers, Leah F. Cabo, Ruhan Farsin, Serap Aksoy, Laura J. Runyen-Janecky, Brian L. Weiss
Biology Faculty Publications
Tsetse flies (Diptera: Glossinidae) house a taxonomically diverse microbiota that includes environmentally acquired bacteria, maternally transmitted symbiotic bacteria, and pathogenic African trypanosomes. Sodalis glossinidius, which is a facultative symbiont that resides intra and extracellularly within multiple tsetse tissues, has been implicated as a mediator of trypanosome infection establishment in the fly’s gut. Tsetse’s gut-associated population of Sodalis are subjected to marked temperature fluctuations each time their ectothermic fly host imbibes vertebrate blood. The molecular mechanisms that Sodalis employs to deal with this heat stress are unknown. In this study, we examined the thermal tolerance and heat shock response of …
Structure Of The 5′ Untranslated Region Of Enteroviral Genomic Rna, Bejan Mahmud, Christopher M. Horn, William E. Tapprich
Structure Of The 5′ Untranslated Region Of Enteroviral Genomic Rna, Bejan Mahmud, Christopher M. Horn, William E. Tapprich
Biology Faculty Publications
Enteroviral RNA genomes share a long, highly structured 5= untranslated region (5= UTR) containing a type I internal ribosome entry site (IRES). The 5= UTR is composed of stably folded RNA domains connected by unstructured RNA regions. Proper folding and functioning of the 5= UTR underlies the efficiency of viral replication and also determines viral virulence. We have characterized the structure of 5= UTR genomic RNA from coxsackievirus B3 using selective 2=-hydroxyl acylation analyzed by primer extension (SHAPE) and base-specific chemical probes in solution. Our results revealed novel structural features, including realignment of major domains, newly identified long-range interactions, and …
Isotopic Palaeoecology Of Northern Great Plains Bison During The Holocene, Gaimi Davies, Blake Mccann, Jay Sturdevant, Fern Swenson, Igor V. Ovtchinnikov
Isotopic Palaeoecology Of Northern Great Plains Bison During The Holocene, Gaimi Davies, Blake Mccann, Jay Sturdevant, Fern Swenson, Igor V. Ovtchinnikov
Biology Faculty Publications
Bison (Bison bison) are one of the few terrestrial megafauna to survive the transition into the Holocene and provide a unique opportunity to study a species on a broad spatiotemporal scale. Today, bison are primarily managed in small and isolated herds with little known about their ancestral ecology. We studied the carbon and nitrogen isotopes of Northern Great Plains bison from the terminal Pleistocene and throughout the Holocene to gain insight into their paleoecology. This time span is contemporary with the first population bottleneck experienced by bison at the end of the Pleistocene and includes the second bottleneck …