Life Sciences Commons^™

Electrochemical Characterization Of The Shell Of The Eastern Oyster, Crassostrea Virginica, Yuhchae Yoon, Andrew S. Mount, Karolyn Hansen, Douglas C. Hansen

Biology Faculty Publications

No abstract provided.

Neurodegeneration - A Means To An End, Amit Singh

Biology Faculty Publications

Cell death, a global phenomenon found throughout the animal kingdom, is a mechanism to maintain tissue homeostasis and for adaptation to changes in the environment [1,2]. Millions of cells die in our body daily- they succumb to stress and commit suicide by a mechanism referred to as cell death or apoptosis [2-4]. Under normal conditions cells are continuously replaced by new cells from the stemor progenitor- cells. For example, an optimum balance in shedding of dead cells from the skin and their replenishment by new ones maintain our health and hygiene. In this context, apoptosis is a mechanism to eliminate …

Variable Effect Of Co-Infection On The Hiv Infectivity: Within-Host Dynamics And Epidemiological Significance, Diego F. Cuadros, Gisela García-Ramos

Biology Faculty Publications

BACKGROUND: Recent studies have implicated viral characteristics in accounting for the variation in the HIV set-point viral load (spVL) observed among individuals. These studies have suggested that the spVL might be a heritable factor. The spVL, however, is not in an absolute equilibrium state; it is frequently perturbed by immune activations generated by co-infections, resulting in a significant amplification of the HIV viral load (VL). Here, we postulated that if the HIV replication capacity were an important determinant of the spVL, it would also determine the effect of co-infection on the VL. Then, we hypothesized that viral factors contribute to …

Planarians In Pharmacology: Parthenolide Is A Specific Behavioral Antagonist Of Cocaine In The Planarian Girardia Tigrina, Oné R. Pagán, Debra Baker, Sean Deats, Erica Montgomery, Matthew Tenaglia, Clinita Randolph, Dharini Kotturu, Christopher Tallarida, Daniel Bach, Galia Wilk, Scott Rawls, Robert B. Raffa

Biology Faculty Publications

Planarians are traditional animal models in developmental and regeneration biology. Recently, these organisms are arising as vertebrate-relevant animal models in neuropharmacology. Using an adaptation of published behavioral protocols, we have described the alleviation of cocaine-induced planarian seizure-like movements (pSLM) by a naturally-occurring sesquiterpene lactone, parthenolide. Interestingly, parthenolide does not prevent the expression of pSLM induced by amphetamines; in vertebrates, amphetamines interact with the same protein target as cocaine. Parthenolide is also unable to prevent pSLM elicited by the cholinergic compounds nicotine and cytisine or by the glutamatergic agents L- or D- glutamic acid or NMDA. Thus, we conclude that parthenolide …

Targeted Disruption Of Toxoplasma Gondii Serine Protease Inhibitor 1 Increases Bradyzoite Cyst Formation In Vitro And Parasite Tissue Burden In Mice, Viviana Pszenny, Paul H. Davis, Xing W. Zhou, Christopher A. Hunter, Vern B. Carruthers, David S. Roos

Biology Faculty Publications

As an intracellular protozoan parasite, Toxoplasma gondii is likely to exploit proteases for host cell invasion, acquisition of nutrients, avoidance of host protective responses, escape from the parasitophorous vacuole, differentiation, and other activities. T. gondii serine protease inhibitor 1 (TgPI1) is the most abundantly expressed protease inhibitor in parasite tachyzoites. We show here that alternative splicing produces two TgPI1 isoforms, both of which are secreted via dense granules into the parasitophorous vacuole shortly after invasion, become progressively more abundant over the course of the infectious cycle, and can be detected in the infected host cell cytoplasm. To …

Partridge Berry: Simple Beauty Belies Complexity, W. John Hayden

Biology Faculty Publications

Superficially, plants seem so simple. Rooted in place, they do not move around. And while plant growth is a dynamic process, without time-lapse photography, growth events are so imperceptibly slow that, to us impatient humans, plants seem both immobile and static. Nevertheless, there is a lot going on inside the plant body, and this is especially true for the events of reproduction that play out inside flowers and fruits. As one of my students recently commented, “I used to think it was just a matter of pollen plus stigma and, presto-change-o, seeds happen.” That student, I hope, learned otherwise, as …

The Bird Of Time: Cognition And The Avian Biological Clock, Vincent M. Cassone, David F. Westneat

Biology Faculty Publications

Avian behavior and physiology are embedded in time at many levels of biological organization. Biological clock function in birds is critical for sleep/wake cycles, but may also regulate the acquisition of place memory, learning of song from tutors, social integration, and time-compensated navigation. This relationship has two major implications. First, mechanisms of the circadian clock should be linked in some way to the mechanisms of all these behaviors. How is not yet clear, and evidence that the central clock has effects is piecemeal. Second, selection acting on characters that are linked to the circadian clock should influence aspects of the …

Implication Of The Mir-184 And Mir-204 Competitive Rna Network In Control Of Mouse Secondary Cataract, Andrea Hoffmann, Yusen Huang, Rinako Suetsugu-Maki, Carol S. Ringelberg, Craig R. Tomlinson, Katia Del Rio-Tsonis, Panagiotis A. Tsonis

Biology Faculty Publications

The high recurrence rate of secondary cataract (SC) is caused by the intrinsic differentiation activity of residual lens epithelial cells after extra-capsular lens removal. The objective of this study was to identify changes in the microRNA (miRNA) expression profile during mouse SC formation and to selectively manipulate miRNA expression for potential therapeutic intervention. To model SC, mouse cataract surgery was performed and temporal changes in the miRNA expression pattern were determined by microarray analysis. To study the potential SC counterregulative effect of miRNAs, a lens capsular bag in vitro model was used. Within the first 3 wks after cataract surgery, …

Effects Of Vegetation, Corridor Width And Regional Land Use On Early Successional Birds On Powerline Corridors, Robert A. Askins, Corrine M. Folsom-O'Keefe, Margaret C. Hardy

Biology Faculty Publications

Powerline rights-of-way (ROWs) often provide habitat for early successional bird species that have suffered long-term population declines in eastern North America. To determine how the abundance of shrubland birds varies with habitat within ROW corridors and with land use patterns surrounding corridors, we ran Poisson regression models on data from 93 plots on ROWs and compared regression coefficients. We also determined nest success rates on a 1-km stretch of ROW. Seven species of shrubland birds were common in powerline corridors. However, the nest success rates for prairie warbler (Dendroica discolor) and field sparrow (Spizella pusilla) were

Environmentally Realistic Exposure To The Herbicide Atrazine Alters Some Sexually Selected Traits In Male Guppies, Kausalya Shenoy

Biology Faculty Publications

Male mating signals, including ornaments and courtship displays, and other sexually selected traits, like male-male aggression, are largely controlled by sex hormones. Environmental pollutants, notably endocrine disrupting compounds, can interfere with the proper functioning of hormones, thereby impacting the expression of hormonally regulated traits. Atrazine, one of the most widely used herbicides, can alter sex hormone levels in exposed animals. I tested the effects of environmentally relevant atrazine exposures on mating signals and behaviors in male guppies, a sexually dimorphic freshwater fish. Prolonged atrazine exposure reduced the expression of two honest signals: the area of orange spots (ornaments) and the …

High Altitude Diving In River Otters: Coping With Combined Hypoxic Stresses, Jamie R. Crait, Henry D. Prange, Noah A. Marshall, Henry J. Harlow, Clark Cotton, Merav Ben-David

Biology Faculty Publications

River otters (Lontra canadensis) are highly active, semi-aquatic mammals indigenous to a range of elevations and represent an appropriate model for assessing the physiological responses to diving at altitude. In this study, we performed blood gas analyses and compared blood chemistry of river otters from a high-elevation (2357 m) population at Yellowstone Lake with a sea-level population along the Pacific coast. Comparisons of oxygen dissociation curves (ODC) revealed no significant difference in hemoglobin-oxygen (Hb-O₂) binding affinity between the two populations - potentially because of demands for tissue oxygenation. Instead, high-elevation otters had greater Hb concentrations (18.7 …

Tumor Suppression By Cell Competition Through Regulation Of The Hippo Pathway, Chiao-Lin Chen, Molly C. Schroeder, Madhuri Kango-Singh, Chunyao Tao, Georg Halder

Biology Faculty Publications

Homeostatic mechanisms can eliminate abnormal cells to prevent diseases such as cancer. However, the underlying mechanisms of this surveillance are poorly understood. Here we investigated how clones of cells mutant for the neoplastic tumor suppressor gene scribble (scrib) are eliminated from Drosophila imaginal discs. When all cells in imaginal discs are mutant for scrib, they hyperactivate the Hippo pathway effector Yorkie (Yki), which drives growth of the discs into large neoplastic masses. Strikingly, when discs also contain normal cells, the scrib− cells do not overproliferate and eventually undergo apoptosis through JNK-dependent mechanisms. However, induction of apoptosis does …

Increased Variability Of Microbial Communities In Restored Salt Marshes Nearly 30 Years After Tidal Flow Restoration, Anne E. Bernhard, David Marshall, Lazaros Yiannos

Biology Faculty Publications

We analyzed microbial diversity and community composition from four salt marsh sites that were impounded for 40–50 years and subsequently restored and four unimpounded sites in southeastern Connecticut over one growing season. Community composition and diversity were assessed by terminal restriction fragment length polymorphism (TRFLP) and sequence analysis of 16S ribosomal RNA (rRNA) genes. Our results indicated diverse communities, with sequences representing 14 different bacterial divisions. Proteobacteria, Bacteroidetes, and Planctomycetes dominated clone libraries from both restored and unimpounded sites. Multivariate analysis of the TRFLP data suggest significant site, sample date, and restoration status effects, but the exact causes of these …

Nef Functions In Blt Mice To Enhance Hiv-1 Replication And Deplete Cd4+Cd8+ Thymocytes, Wei Zou, Paul W. Denton, Richard L. Watkins, John F. Krisko, Tomonori Nochi, John L. Foster, J. Victor Garcia

Biology Faculty Publications

Background: The outcome of untreated HIV-1 infection is progression to AIDS and death in nearly all cases. Some important exceptions are the small number of patients infected with HIV-1 deleted for the accessory gene, nef. With these infections, disease progression is entirely suppressed or greatly delayed. Whether Nef is critical for high levels of replication or is directly cytotoxic remains controversial. The major problem in determining the role of Nef in HIV/AIDS has been the lack of tractable in vivo models where Nef’s complex pathogenic phenotype can be recapitulated.

Results: Intravenous inoculation (3000 to 600,000 TCIU) of BLT …

Receptor Chimeras Demonstrate That The C-Terminal Domain Of The Human Cytomegalovirus Us27 Gene Product Is Necessary And Sufficient For Intracellular Receptor Localization, Lance K. Stapleton, Kathleen L. Arnolds, Angela P. Lares, Tori M. Devito, Juliet V. Spencer

Biology Faculty Publications

Background

Human cytomegalovirus (HCMV) is ubiquitous in the population but generally causes only mild or asymptomatic infection except in immune suppressed individuals. HCMV employs numerous strategies for manipulating infected cells, including mimicry of G-protein coupled receptors (GPCRs). The HCMV US27 gene product is a putative GPCR, yet no ligand or signaling has been identified for this receptor. In the present study, immunofluorescence microscopy was used to examine the cellular distribution of wild type US27, as well as US27 deletion mutants and chimeric receptors.

Results

In transiently transfected cells, wild type US27 was found primarily in intracellular compartments, in striking contrast …

Toxic Effects Of Copper, Cadmium, And Methoxychlor Shown By Neutral Red Retention Assay In Two Species Of Freshwater Molluscs, Nikolett Molnar, Peter Fong

Biology Faculty Publications

We used neutral red retention assay in lysosomes of digestive gland cells as an indicator for stress effects by the environmental contaminants Cu, Cd, and the pesticide methoxychlor in two freshwater molluscs, the unionid mussel, Elliptio complanata (Lightfoot) and the ramshorn snail Helisoma trivolvis (Say). Mussels and snails were exposed for 7 and 14 days to Cu and Cd each at nominal concentrations of 2.5 μg/L, 5.0 μg/L, and 10.0 μg/L, and to methoxychlor concentrations of 1.0 μg/L, 10.0μg/L, and 100.0 μg/L. Both mussels and snails exposed to Cu showed a significant increase in the percent of destabilized lysosomes compared …

Conserving Our Cultural Heritage: The Role Of Fungi In Biodeterioration, Hanna Szczepanowska, A. R. Cavaliere

Biology Faculty Publications

The objects of cultural heritage are composed of varied materials which can be affected by diverse microbial communities. The study of these complex and heterogeneous assemblies of materials and microorganisms require an inter- and multi-disciplinary approach. Development of a strategy towards prevention, mitigation of biodeterioration and removal of microorganisms, especially fungi begins with the understanding of the materials' fabric, assessment of causes behind the biodeterioration, and the context in which it occurs.

Three aspects of biodeterioration of cultural heritage are discussed: 1) the multitude of bio-agents' on cultural heritage materials, 2) fungal interaction with substrates, and 3) prevention and conservation …

Strong Self-Limitation Promotes The Persistence Ofrare Species, G. M. Yenni, P. B. Adler, S.K. Morgan Ernest

Biology Faculty Publications

Theory has recognized a combination of niche and neutral processes each contributing, with varying importance, to species coexistence. However, long-term persistence of rare species has been difficult to produce in trait-based models of coexistence that incorporate stochastic dynamics, raising questions about how rare species persist despite such variability. Following recent evidence that rare species may experience significantly different population dynamics than dominant species, we use a plant community model to simulate the effect of disproportionately strong negative frequency dependence on the long-term persistence of the rare species in a simulated community. This strong self-limitation produces long persistence times for the …

Notes On Notonectidae (Hemiptera: Heteroptera) From Southeastern Asia, Mostly From Brunei And The Philippines, Hendrik Freitag, Herbert Zettel, David J.W Lane, Clister V. Pangantihon

Biology Faculty Publications

Updated distribution data are presented for the following species of Notonectidae (Heteroptera) in southeastern Asia: Anisops breddini Kirkaldy, 1901, A. kuroiwae Matsumura, 1915, A. nasutus Fieber, 1851, A. nigrolineatus Lundblad, 1933, A. occipitalis Breddin, 1905, A. rhomboides Nieser & Chen, 1999, A. stali Kirkaldy, 1904, Aphelonecta philippina Zettel, 1995, Enithares bakeri Brooks, 1948, E. freyi Brooks, 1948, E. intha Paiva, 1918, E. mandalayensis Distant, 1910, E. martini martini Kirkaldy, 1898, E. quadrispinosa Lansbury, 1967, E. sinica (Stål, 1854), E. subparallela Lansbury, 1968, E. uncata Lundblad, 1933, E. cf. vicintricata Lansbury, 1968, and Nychia sappho Kirkaldy, 1901. There are six fi …

Digital Microscopic Imaging Of Important Taxonomic Characters Of Philippine Hydraena (Hydraenopsis) Species, Hendrik Freitag

Biology Faculty Publications

Biodiversity surveys have revealed several new aquatic beetle species of minute size (0.9 mm to 1.8 mm body length). Following modern standards of morphological taxonomy, internal and external microstructures such as aedeagus, ovipositor, spermatheca, gonocoxite as well as the distribution pattern and shape of certain hair structures were used to illustrate the distinguishing characters of new species. As even the smallest diaphragm opening of light microscopes fails to retrieve images of sufficient depth of the field, light microscope images under ZEISS Primo Vert inverted microscope, equipped with ZEISS LD Plan-ACHROMAT 20X objective lens, and an OLYMPUS SZ 61 stereomicroscope, were …

Structure-Function Analysis Of Nel, A Thrombospondin-1-Like Glycoprotein Involved In Neural Development And Functions, Masaru Nakamoto

Biology Faculty Publications

Nel (neural epidermal growth factor (EGF)-like molecule) is a multimeric, multimodular extracellular glycoprotein with heparin-binding activity and structural similarities to thrombospondin-1. Nel is predominantly expressed in the nervous system and has been implicated in neuronal proliferation and differentiation, retinal axon guidance, synaptic functions, and spatial learning. The Nel protein contains an N-terminal thrombospondin-1 (TSP-N) domain, five cysteine-rich domains, and six EGF-like domains. However, little is known about the functions of specific domains of the Nel protein. In this study, we have performed structure-function analysis of Nel, by using a series of expression constructs for different regions of the Nel protein. …

2012 Wildflower Of The Year: Partridge Berry, Mitchella Repens, W. John Hayden

Biology Faculty Publications

Although partridge berry is a small and creeping herb, its jewel-like beauty rewards attentive naturalists year-round.

Light Management Important Factor For Partridge Berry, W. John Hayden

Biology Faculty Publications

Factors essential for plant life include adequate levels of light, moisture, mineral nutrients, and temperature; though the list is small, each is crucial for survival. This article is a contemplation of how one of these critical factors, light, impacts the biology of our 2012 Wildflower of the Year, Mitchella repens, partridge berry. Aside from issues of reproductive biology, ecological literature on partridge berry is meager. Consequently most of what follows is derived from general works on woodland ecology, perusal of which provides sufficient insight about the biology of Mitchella to inspire ideas worthy of further study.

Leptodactylus Pentadactylus, Miriam M. Heyer, W. R. Heyer, Rafael O. De Sá

Biology Faculty Publications

Adult Leptodactylus pentadactylus (Figure 1) are large, the head is about as wide as long, and the hind limbs are moderately long (Table 1; Heyer and Thompson [2000] provided definitions of adult size and leg length categories for Leptodactylus). Male vocal sacs are not visible externally or are moderately expanded as a single sac. Sexually active males usually do not have hypertrophied forearms (the largest male examined, 195 mm SVL, has very weakly hypertrophied forearms), only the largest males have a single small to moderate size black spine on each thumb. No males have chest spines. Dorsolateral folds are …

Toxoplasma On The Brain: Understanding Host-Pathogen Interactions In Chronic Cns Infection, Sushrut Kamerkar, Paul H. Davis

Biology Faculty Publications

Toxoplasma gondii is a prevalent obligate intracellular parasite which chronically infects more than a third of the world’s population. Key to parasite prevalence is its ability to form chronic and nonimmunogenic bradyzoite cysts, which typically form in the brain and muscle cells of infected mammals, including humans. While acute clinical infection typically involves neurological and/or ocular damage, chronic infection has been more recently linked to behavioral changes. Establishment and maintenance of chronic infection involves a balance between the host immunity and parasite evasion of the immune response. Here, we outline the known cellular interplay between Toxoplasma gondii and cells of …

Cytoplasmic Sequestration Of The Tumor Suppressor P53 By A Heat Shock Protein 70 Family Member, Mortalin, In Human Colorectal Adenocarcinoma Cell Lines, Erin E. Gestl, S. Anne Boettger

Biology Faculty Publications

No abstract provided.

Barnacle Bonding: Morphology Of Attachment Of Xenobalanus Globicipitis To Its Host Tursiops Truncatus, Mark C. Pugliese, Stefanie Anne Boettger, Frank E. Fish

Biology Faculty Publications

No abstract provided.

Bioahdhesion In Caulerpa Mexicana (Chlorophyta); Rhizoid-Substrate Adhesion, Wayne R. Fagerburg, Jennifer Towle, Clinton J. Dawes, Anne Boettger

Biology Faculty Publications

No abstract provided.

Acetylcholine Esterase Activity And Muscle Contraction In The Sea Urchin Lytechinus Variegatus (Lamarck) Following Chronic Phosphate Exposure, S. Anne Boettger, James B. Mcclintock

Biology Faculty Publications

No abstract provided.

Phylomarker—A Tool For Mining Phylogenetic Markers Through Genome Comparison: Application Of The Mouse Lemur (Genus Microcebus) Phylogeny, Runhua Lei, Thaine W. Rowley, Lifeng Zhu, Carolyn A. Bailey, Shannon E. Engberg, Mindy L. Wood, Mary C. Christman, George H. Perry, Edward E. Louis Jr., Guoqing Lu

Biology Faculty Publications

Molecular phylogeny is a fundamental tool to understanding the evolution of all life forms. One common issue faced by molecular phylogeny is the lack of sufficient molecular markers. Here, we present PhyloMarker, a phylogenomic tool designed to find nuclear gene markers for the inference of phylogeny through multiple genome comparison. Around 800 candidate markers were identified by PhyloMarker through comparison of partial genomes of Microcebus and Otolemur. In experimental tests of 20 randomly selected markers, nine markers were successfully amplified by PCR and directly sequenced in all 17 nominal Microcebus species. Phylogenetic analyses of the sequence data obtained for 17 …