Life Sciences Commons^™

Direct And Indirect Effects Of Climate Change On Plant Populations And Communities In Sagebrush Steppe, Andrew R. Kleinhesselink

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Rapid climate change presents humanity with a number of big problems. Foremost among these is the sad fact that the climate we will pass on to our children will likely be nothing like the climate that we inherited from our parents. Ecologists have collected solid evidence that climate change has already begun to affect the living things around us and the ecosystems humans depend on. Unfortunately, predicting the future effects of climate change on life on earth is not easy. We focused on three research goals as part of an effort to improve our ability to predict how plants and …

Evaluating The Effectiveness Of Utah Farm Field Days, Paige Wray

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Utah farm field day events seek to increase agricultural literacy among elementary students. Although these events are occurring statewide, no formal evaluation has been conducted to determine student increases in agricultural literacy related to these events. The purpose of this study was to evaluate two such events to see what students knew about agriculture before they attended the farm field day, what they wanted to learn about concerning agriculture, and what they learned after attending the event. Results showed that these children were below average for expected grade level understandings or agricultural awareness before the event. However, after the event, …

Nitrogen Excretion Of Lactating Dairy Cows Fed An Alfalfa Hay- Or Birdsfoot Trefoil Hay-Based High-Forage Diet, Mohammad Ghelich Khan

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Legumes that contain condensed tannins (CT) may have lower protein degradability than alfalfa. The present study investigated the effects of feeding birdsfoot trefoil (Lotus corniculatus L.) hay on lactation performance and N utilization. Eight multiparous Holstein cows in mid lactation (150 ± 22.3 d-in-milk) were randomly assigned to 1 of 2 rations [alfalfa hay-based TMR (AHT) or birdsfoot trefoil hay-based TMR (BFTT)] in a crossover design with 2 experimental periods. Each experimental period lasted 16 d (14 d of adaptation and 2 d of total collection), and the 2 experimental periods were separated by a 7-d washout period. In the …

Effects Of Variable And Changing Environments On Demography: Inferences From A Lesser Snow Goose Colony, David T. Iles

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The mean and variability of environmental conditions have changed as a result of human activity, and continued changes are predicted. The strongest effects on natural populations will often be channeled through species interactions, as shifts in species range limits and life cycle schedules will shift in relation to each other. These changes will often impact rates of survival, growth, and reproduction simultaneously, and these effects will likely differ across habitats.

In chapter 2, I used mathematical modeling and computer simulations to investigate the evolutionary significance of increasingly variable environments, and examine how evolutionary pressures change when multiple vital rates are …

Molecular And Physiological Mechanisms Of Toxin Resistance In Toad-Eating Snakes, Shabnam Mohammadi

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Many plants and animals are defended by toxic compounds, and circumvention of those defenses often has involved the evolution of elaborate mechanisms for tolerance or resistance of the toxins. Toads synthesize potent cardiotonic steroids known as bufadienolides (BDs) from cholesterol and store those toxins in high concentrations in their cutaneous glands. Those toxins protect toads from the majority of predators, including most snakes that readily consume other species of frogs. BDs exert their effect by inhibiting ion transport by the Na⁺/K⁺-ATPase (NKA). This ubiquitous transmembrane enzyme consists of a catalytic alpha-subunit, which carries out the enzyme's …

The Performance Of A Bioenergetics Model In A System With An Abundant Population Of Salmonids: A Case Study Of Cutthroat Trout In The Logan River, Utah, Martha L. Jensen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Widespread habitat degradation and fragmentation has significantly altered the distribution and abundance of salmonids across the Western United States. To effectively conserve these fish, managers need tools to evaluate habitat quality in physically diverse streams and watersheds. Traditionally, habitat assessment for stream fish has focused on the physical characteristics of sites. Thus, such research has often overlooked important biological factors, such as the availability of prey or the presence and abundance of competitors or predators. In recent years, however, researchers have considered habitat from both physical and biological dimensions.

Bioenergetics models offer a way to combine the both the biotic …

The Influence Of Wind Energy Development On Columbian Sharp-Tailed Grouse (Tympanuchus Phasianellus Columbianus) Breeding Season Ecology In Eastern Idaho, Matthew C. Proett

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Columbian sharp-tailed grouse (Tympanuchus phasianellus columbianus; CSTG) has experienced range-wide population declines, primarily as a result of habitat loss or degradation, and currently occupies <10% of its historic range. Expansion of wind energy developments across the remaining occupied CSTG range has been identified as a potential threat to the species. To assess the potential influence of wind energy development of CSTG breeding season ecology, I captured and radio-marked 135 female CSTG drugin 2014-2015 at leks located between 0.1-13.8 km from wind turbines in restored grassland habitats. Using radio-telemetry, I monitored 147 nests and 68 broods and developed models to assess the influence of wind turbines, roads, habitat features temporal factors, and precipitation on CSTG nest site selection, nest survival, brood success, and chick survival. Female CSTG in my study selected nest sites in grassland habitats where >30% of the canopy cover in the nesting core use area was composed of forbs (i.e., broadleaf plants). The strength of selection for this habitat type increased as its availability increased on the landscape. Nest survival increased with higher visual obstruction readings (i.e., concealment) at the nest bowl and in grassland habitats where forb cover exceeded 30% in the nesting core use area. I did not detect an influence of wind turbines or …

Conservative Tryptophan Mutations In Protein Tyrosine Phosphatase Ptp1b And Its Effect On Catalytic Rate And Chemical Reaction, Teisha Richan

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Protein-tyrosine phosphatases (PTPs) catalyze the hydrolysis of phosphorylated tyrosines by a 2-step mechanism involving nucleophilic attack by cysteine and general acid catalysis by aspartic acid. In most PTPs the aspartic acid resides on a flexible protein loop, consisting of about a dozen residues, called the WPD loop. PTP catalysis rates span several orders of magnitude, and differences in WPD loop dynamics have recently been show to correlate with the rate of enzymatic catalysis. The rate of WPD loop motion could possibly be related to a widely conserved tryptophan residue on the WPD loop. Therefore, point mutants were made in PTP1B …

Effect Of N-3 And N-6 Polyunsaturated Fatty Acids On Inflammation, Tao Xu

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Intake of polyunsaturated fatty acids (PUFA) has changed drastically in the past century in the American diet has received attention due to potential effects on chronic inflammation-related metabolic diseases. In this project, the effects of dietary PUFA content and the n-6 to n-3 ratio on inflammatory responses in the acute and chronic inflammation models were evaluated. The PUFA content was modified on a Western diet background to deliver both n-6 and n-3 intakes at the 10^th and 90^th percentile of the population in the United States, and models of acute and chronic inflammation were tested in mice model. …

Mechanism Of Substrate Reduction By Nitrogenase, Nimesh Khadka

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Nitrogen (N) is a vital element of life and the main component of chemical fertilizer. The industrial Haber-Bosch process fulfills the demands of today’s nitrogen need and is therefore considered as one of the major scientific breakthroughs of the last century. However, the Haber-Bosch process operates at very high temperature and pressure, and requires fossils fuels to drive the reaction, making it an energy expensive process. The energy demand for this process accounts for almost 3% of the total global energy consumption. In addition, the rapid population growth, economic development and depletion of limited non-renewable fossil fuels have already created …

The Behavior And Ecology Of Cursorial Predators And Dangerous Prey: Integrating Behavioral Mechanisms With Population-Level Patterns In Large Mammal Systems, Aimee Tallian

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Driving into Yellowstone National Park for the first time is a moving experience. Gazing over the sweeping landscapes, seeing a geyser erupt 80 feet into the air, and having your first ‘wildlife encounter’, whether that be a 2 ton bull bison aggressively wallowing on his dirt mound, snorting and kicking up dust, or watching a pack of 6 wolves move through a valley off in the distance, pausing to howl in search of their companions. Yellowstone staff wishes to manage our park in a way that preserves these remarkable experiences. In order to effectively manage this dynamic ecosystem, it is …

Spatial Ecology Of Coyotes And Cougars: Understanding The Influence Of Multiple Prey On The Spatial Interactions Of Two Predators, Peter J. Mahoney

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The coyote (Canis latrans) has expanded throughout much of North America over the past century following the regional extirpation of apex predators. These highly adaptable canids can occupy a variety of landscapes from the rainforests of Central America to the dense, human-dominated urban centers of the United States. As a generalist predator, coyotes can capitalize on a variety of food resources, including anthropogenic subsidies such as domestic livestock and food tailings at landfills. These tendencies often bring coyotes in direct conflict with humans, forcing managers to consider mitigation strategies ranging from the targeted removal of problem individuals to …

Predicting The Impact Of A Northern Pike (Esox Lucius) Invasion On Endangered June Sucker (Chasmistes Liorus) And Sport Fishes In Utah Lake, Ut, Jamie Reynolds

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Invasive species introductions are associated with negative economic and environmental impacts, including reductions in native species populations. Successful invasive species populations often grow rapidly and a new food web structure is established. The ability of invasive species to outcompete and prey upon native species are two characteristics that make them a leading cause of fish extinctions in North America.

Northern pike (Esox lucius; hereafter pike) are voracious ambush top predators \native to the upper Midwest and Mid-Atlantic regions of the lower 48 United States, Alaska, and southern Canada. Pike have been spreading across the Intermountain West and Pacific …

Spatial And Behavioral Patterns Of Captive Coyotes, Jeffrey T. Schultz

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Environmental enrichment is a technique used at many captive animal facilities that can improve the well-being of their animals. It seeks to enhance habitat features and promote natural behavior by providing a variety of practical ways for captive animals to control their environmental settings, especially during stressful circumstances. Enclosure features, such as shelter structures, are one tool that promotes wild behavior by adding complexity to an enclosure’s physical environment. Enrichment efforts for captive wildlife are most effective when they are specialized to the biological needs of the animals. Human activity may alter captive animal behavior and utility of enclosure features, …

Interactions Between Plant Water-Stress And Neonicotinoid Insecticides On Spider Mite Infestations In Corn, Alice Ruckert

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Spider mites (Acari: Tetranychidae) are an important agricultural pest of many crops and landscape plants. They can reproduce rapidly and quickly develop resistance to many pesticides, making them difficult to manage. Plant water-stress and high temperatures promote spider mite infestations, while spider mite outbreaks can also result from neonicotinoid insecticide applications. Drought is predicted to increase in the Intermountain West due to increases in temperature and reduced frequency of precipitation events in the region, and neonicotinoids are currently one of the most widely used classes of insecticides in field crops. I studied the interactive effect of these two simultaneously occurring …

Characterization Of The Substrate Interactions And Regulation Of Protein Arginine Methyltransferase, Yalemi Morales

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Protein arginine methylation is a posttranslational modification catalyzed by the family of proteins known as the protein arginine methyltransferases (PRMTs). Thousands of methylated arginines have been found in mammalian cells. Many targets of arginine regulation are involved in important cellular processes like transcription, RNA transport and processing, translation, cellular signaling, and DNA repair. Since PRMT dysregulation has been linked to a variety of disease states, understanding how the activity of the PRMTs is regulated is of paramount importance. PRMT1 is the predominant PRMT, responsible for about 85% of all arginine methylation in cells, but very little is known about how …

The Effects Of Rootstock, Scion, Grafting Method And Plant Growth Regulators On Flexural Strength And Hydraulic Resistance Of Apple, Stuart W. Adams

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The apple rootstock ‘Geneva^® 41’ (‘G.41’), is desirable for its resistance to fire blight, Erwinia amylovora, while producing high yields. However, ‘G.41’ and other Geneva^® selections tend to form weak graft unions in the nursery that are susceptible to breaking in the wind, at harvest, or during shipment. In order to understand and remedy this graft union weakness, six scions (‘Fuji’, ‘Gala’, ‘Honeycrisp’, ‘McIntosh’, ‘Pink Lady’, and ‘Scilate’) by seven rootstocks (‘G.41’, ‘G.935’, ‘G.214’, ‘G.11’, ‘M.9-NIC 29’, ‘B.9’ and ‘EMLA 26’), by two grafting methods (chip bud and saddle graft) in a factorial design were tested for graft …

Oocyte Quality: Molecular Constituents Altered In The Oocyte Due To Various Environmental Factors, Lindsay Cox

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

An estimated 1.6 million American couples struggle with infertility. Some causes for poor fertility can be clearly defined but in many instances, subfertility is unexplained. Poor oocyte quality is now considered to be a main contributing factor for many causes of infertility. Good oocyte quality is crucial for many processes including embryo development and maintaining pregnancy. There is a possibility that any alterations to the oocyte can have long lasting effects on embryo development and the health of the offspring. The oocyte is very sensitive to any perturbations to its surrounding environment. Transcripts for apoptosis inhibitors and epigenetic modifiers were …

Stable Isotopes And The Ecology And Physiology Of Reptiles, Andrew M. Durso

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

When animals don’t have enough food, they have to “choose” between “spending” their limited energy on themselves or on their offspring. Biologists think that reptiles can make this choice quickly in response to different environments. But, it can be hard to study these choices because it is hard to convert between, for example, the number of eggs laid and the speed of healing a wound. By using stable isotope chemistry, we can collect more detailed and comparable information about how lizards and other animals spend their limited resources than with any other method. For example, lizards in the wild have …

Hybridization, Population Genetic Structure And Gene Expression In The Genus Boechera, Martin Peter Schilling

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

When we look at life on earth, we can see a lot of different life forms, but we still do not fully understand how these different life forms came to be and at which points in time these life forms began to be different enough from each other so we could call them by different names, or species. Some groups of species on earth, especially plants, seem to reproduce with each other, even though they are already very different from each other so that we call them different species. This process is called hybridization, and it can stir up the …

An Economic Analysis Of Factors Affecting Pre-Weaned Dairy Calf Growth And Profit Optimization In Dairy Calf Operations, Vincent T. Hess

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study was an extension of a study submitted in April 2014 by Sheldon D. Holt entitled “Ambient Temperature, Calf Intakes, and Weight Gains on Preweaned Dairy Calves”.

A major component in a profitable dairy operation is the raising of female calves as replacement heifers; but since no direct income is generated by calf raising alone, it is often overlooked as a potential profit area on a dairy farm. Calf management practices that ultimately impact milk productivity and reproductive performance during a heifer’s lifetime begin at birth. This study examines the effect of calf starter intake on calf growth, measuring …

An Analysis Of The Feasibility Of Anaerobic Digestion On Small-Scale Dairies In Utah, Steven Chans Lund

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

With an ever increasing concern for the environment, different methods of managing organic waste on dairy farms have been explored and analyzed. Anaerobic digestion has long been a popular method of managing organic waste. Its popularity stems from the potential to decrease greenhouse gases, improve air quality and provide a source of additional revenue for the farm. Problems with implementing anaerobic digestion arise from high failure rates, high start-up costs and continuous maintenance and equipment replacement.

Subsidies for the initial investment and improved technology have increased the possibility of large-scale dairy farms to adopt anaerobic digestion. Due to economies of …

Greater Sage-Grouse Vital Rate And Habitat Use Response To Landscape Scale Habitat Manipulations And Vegetation Micro-Sites In Northwestern Utah, Charles P. Sandford

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The greater sage-grouse (Centrocercus urophasianus; sage-grouse) has been a species of conservation concern since the early 20^th century. The decline of populations has largely been attributed to loss and degradation of sagebrush (Artemisia spp.) habitats. To contribute to the knowledge of sage-grouse ecology and quantify the effectiveness of landscape scale habitat manipulations intended to benefit sage-grouse, I monitored habitat use and vital-rates (i.e., nest and brood success) of 45 sage-grouse females in the Box Ender Sage-Grouse Management Area (SGMA) in northwestern Utah. Using telemetry locations of sage-grouse females with known nest and brood fates, I generated …

Establishment And Trends In Persistence Of Selected Perennial Cool-Season Grasses, Craig W. Rigby

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The choice of plant materials is an important factor in restoration or revegetation of disturbed rangelands. To better identify plant materials that could be adapted to increased competition from invasive grasses and fluctuations in temperature and precipitation, there is a need to understand potential seedling establishment, plant persistence, and dry-matter yield (DMY) as a measure of plant vigor in the newly developed varieties across a wide range of environmental conditions. Experiments were conducted on four semiarid range sites to compare these traits in 14 perennial cool-season grass species currently used for revegetation in the Western U.S.A. There were location differences, …

The Demography And Determinants Of Population Growth In Utah Moose (Alces Alces Shirasi), Joel S. Ruprecht

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Moose (Alces alces) occur widely in northern regions of the world. Across their distribution, the species is considered to be of high intrinsic, ecological and recreational value. Populations of moose along their southern range limit in North America have shown erratic population dynamics in recent decades including severe numeric declines in some areas. Moose in Utah belong to the Shiras subspecies, which is a relatively understudied population segment. Additionally, moose in Utah represent the southernmost naturally occurring moose populations worldwide. Concerns over possible declines and a paucity of baseline data on moose within the state prompted the Utah …

Aligning Conservation Goals And Management Objectives For Bonneville Cutthroat Trout (Oncorhynchus Clarki Utah) In The Logan River, Utah, Harrison E. Mohn

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Rivers are often managed without informed knowledge of how sportfish use different areas of the river to reproduce, and rarely take into account the relationship between fish movement and how they are distributed within the river when making management decisions. The population of native Bonneville cutthroat trout (Oncorhynchus clarki utah) within the Logan River is the largest documented population remaining for this imperiled species, and still maintains extremely high numbers of fish in the upper river. Currently, fishing is not allowed in the upper 20 kilometers of the Logan River watershed during spawning, based on the assumption that …

Revegetation Of Bulrushes Bolboschoenus Maritimus, Schoenoplectus Acutus, And S. Americanus In Great Salt Lake Wetlands: Seed Biology And Influence Of Environmental Factors On Rhizomes, James Marty

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

A primary goal of ecological restoration is to establish desirable plant species. This goal is particularly important following the removal of invasive plants. Understanding biological characteristics of plant species important to revegetation is crucial to plant establishment. In the globally important Great Salt Lake (GSL) wetlands, native habitat-forming bulrushes Bolboschoenus maritimus, Schoenoplectus acutus, and S. americanus are frequently displaced by the invasive grass Phragmites australis. Bulrush seeds require very specific germination conditions and are also dormant, therefore they do not germinate consistently even when exposed to appropriate germination conditions. Additionally, wetland environments are often associated with water …

Agricultural Nitrogen Management Affects Microbial Communities, Enzyme Activities, And Functional Genes For Nitrification And Nitrogen Mineralization, Yang Ouyang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Improved understanding of nitrogen cycling in agriculture is essential for increasing fertilizer use efficiency and sustainable food production. The availability and mobility of nitrogen are largely determined by the processes of nitrogen mineralization and nitrification. Nitrification is mediated by ammonia oxidizing bacteria, ammonia oxidizing archaea, and nitrite oxidizing bacteria. Our understanding of the controls on the relative activity of these nitrifying organisms in soil is limited. A wide variety of soil microorganisms produce enzymes that mineralize nitrogen from organic matter, but we have limited knowledge about links between enzyme activity and the microbes that work in soil. The main objective …

Crystallization Behavior Of Waxes, Sarbojeet Jana

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Partially hydrogenated oil (PHO) has no longer GRAS status. However, PHO is one of the important ingredients in bakery and confectionary industry and therefore the food industry is seeking for an alternative fat to replace PHO. Waxes have shown promise to fulfill that demand because of its easy availability and cheap in price. Waxes with high melting points (> 40 °C) help in the crystallization process when mixed with low melting point oils. A crystalline network is formed in this wax/oil crystallization process where liquid oil is entrapped in wax crystal network. A new material is formed which is neither …

Discharge-Suspended Sediment Relations: Near-Channel Environment Controls Shape And Steepness, Land Use Controls Median And Low Flow Conditions, Angus A. Vaughan

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Erosion, transport and deposition of fine sediment (clay, silt and fine sand) influence the form and function of river systems. Excess suspended sediment degrades stream ecosystems and is implicated as a leading cause of water quality and aquatic life impairment. Therefore, understanding the factors that control fine sediment transport patterns is an interesting topic for basic science and one that has important management and policy implications.

In this study, we sought to understand how attributes of the landscape and channel network might control the shape, steepness and vertical offset of the relationship between river discharge and suspended sediment. Watershed and …