Life Sciences Commons^™

The Link Between Environmental Change And Invasive Species, Marion Murray, Meg Kast

All Current Publications

Climate change and invasive species represent two pressing environmental challenges facing our planet. Each poses a threat to global biodiversity and ecosystem stability, and together, they amplify the impacts of the other. As global temperatures rise and ecosystems are disrupted, new conditions are created that allow invasive species to spread more easily, establish themselves in new areas, and outcompete native species.

Utah Surface Irrigation Water Optimization Opportunities And Barriers, Matt Yost, Clara Anderson, Burdette Barker, Justin Wyatt Clawson, Kalen Taylor, Michael Pace

All Current Publications

Surface irrigation systems are still the predominant system used in some parts of Utah, representing nearly half of the irrigated area in the state and the region. Understanding the barriers to water optimization and opportunities for improvement in surface irrigation systems will help ensure their viability. This article presents the results of a survey of surface irrigators in Utah.

Cutthroat Trout In Utah, Hope Northagen, Ethan Gilliam

All Current Publications

This fact sheet is intended to inform anglers, aquatic recreationalists, and backyard conservationists interested in learning about a Utah native species, current restoration steps, and how their actions can help professionals restore native cutthroat trout populations.

The Perfect Pairing: Early Stand Dynamics In Conventional Aspen And Mixedwood Forests In Northern Minnesota, Usa, Chelsea C. Semper, John M. Zobel, Sawyer S. Scherer, Michael R. Reinikainen, Matthew B. Russell, Tyler S. Gifford, Marcella A. Windmuller‑Campione

Aspen Bibliography

In North America, mixedwood management is being increasingly considered by natural resource managers as an alternative to single species management for a variety of ecological, economic, and cultural reasons. In northern Minnesota, USA, natural resource managers are increasingly using treatments to establish mixedwood forests in aspen (Populus tremuloides Michx, Populus grandientata Michx) dominated ecosystems by planting white spruce (Picea glauca (Moench). However, little quantitative information is known regarding differences between stand structure and composition in conventional aspen and aspen-white spruce during early stand development. To provide greater clarity for managers, we sampled 40 aspen stands across a chronosequence …

Potential Epigenetic Impacts Of Phytochemicals On Ruminant Health And Production: Connecting Lines Of Evidence, Sebastian P. Schreiber, Juan Villalba, Mirella L. Meyer-Ficca

Wildland Resources Student Research

The once mysterious “dark matter of nutrition”, comprising countless plant derived secondary compounds, also known as phytochemicals, is now understood to have significant and wide-ranging effects on consumers, including myriad health benefits in humans and livestock. The selective consumption of phytochemically rich and diverse plants, in appropriate doses, by ruminants represents an adaptive means of therapeutic and prophylactic self-medication. Due to their chemical structure, phytochemicals have long been recognized as antioxidants. However, the mechanisms that underlie numerous additional phytochemical-based health benefits are generally less understood. These effects (i.e., anti-inflammatory, immunomodulatory, and anticarcinogenic effects) are likely related to epigenetic processes. Evidence …

Roles Of Organic Agriculture For Water Optimization In Arid And Semi-Arid Regions, Shikha Sharma, Matt A. Yost, Jennifer R. Reeve

Plants, Soils and Climate Student Research

Water scarcity is a critical challenge in arid and semi-arid regions, where agricultural water consumption accounts for a significant portion of freshwater use. Conventional agriculture (CA) methods with high reliance on chemical and mechanical inputs often exacerbate this issue through soil degradation and water loss. This review aims to examine how different organic practices, such as mulching, cover cropping, composting, crop rotation, and no-till (NT) in combination with precision technologies, can contribute to water optimization, and it discusses the opportunities and challenges for the adoption and implementation of those practices. Previous findings show that organic agriculture (OA) may outperform CA …

Morphological And Physiological Responses Of Cymbopogon Citratus And Pennisetum Alopecuroides To Saline Water Irrigation, Haifeng Xing, Asmita Paudel, Julie Hershkowitz, Youping Sun

Plants, Soils, and Climate Faculty Publications

Reclaimed water provides a sustainable and economical alternative for landscape irrigation, but its elevated salinity can negatively impact sensitive plant species. This study evaluated the salinity tolerance of two widely used ornamental grasses, Cymbopogon citratus (lemon grass) and Pennisetum alopecuroides (fountain grass), under three electrical conductivity (EC) levels: 1.2 (control), 5.0, and 10.0 dS·m⁻¹. Visual assessments over 62 days showed that both species maintained an acceptable appearance under saline conditions. C. citratus exhibited no foliar damage, with visual scores above 4.6 even at 10.0 dS·m⁻¹, whereas P. alopecuroides showed slight leaf injury but retained a score …

Influence Of Increasing Fires On Mixed Conifer Stand Dynamics In The U.S. Southwest, Simon D. Baker, Kristen M. Waring, David Auty, Nicholas Wilhelmi

Aspen Bibliography

(1) Stand-replacing fires may threaten the continued stability of mixed conifer forests in the U.S. Southwest. Increasing fire frequency and severity have made post-fire forest recovery trajectories uncertain for many coniferous species, potentially leading to long-term shifts in forest structure and composition. (2) The purpose of this study was to examine post-fire stand dynamics over a 10-year period, using a network of permanent plots established prior to wildfire events across Arizona and New Mexico. We assessed changes in over story composition, regeneration, and fuel loading across different fire severities. (3) High severity fire caused near-total over story mortality, with little …

Experiments To Enhance Post-Fire Aspen Seedling Survival And Growth, Larissa L. Yocom, Mark R. Kreider, Owen T. Burney, Tammy Parsons, Ryan T. Choi, Emily K. Liese, Karen E. Mock

Aspen Bibliography

Aspen forests provide wildlife, watershed, and aesthetic value, and the potential for reduced fire occurrence, behavior, and severity. There is interest in planting aspen to achieve various management objectives. However, few studies have investigated the optimal conditions for aspen seedlings in the western US. We conducted two experiments to address this knowledge gap. First, we tested the effects of shading structures (i.e., logs) and biochar on the survival and growth of 960 outplanted aspen seedlings in three exclosures in a recent fire footprint. Second, we tested whether experimentally placing logs near 120 naturally-occurring post-fire aspen seedlings affected survival or growth. …

Utah Farmers Market Consumer Preferences For Local Cut Flowers, Alison Bingham, Kynda R. Curtis, Makaylie Langford

All Current Publications

In this fact sheet, we review the results of a 2024 study examining consumer preferences for local cut flowers at Utah farmers markets. Study data were collected in person via Qualtrics at six farmers markets across northern Utah, with 51 total responses. We discuss farmers market consumer purchasing preferences, familiarity with labeling programs, and preferred flower colors and varieties. Additionally, the factors influencing consumer decisions when purchasing cut flowers, as well as the product information they rely on, are discussed. Overall, the information in this fact sheet will assist cut flower growers in making informed decisions regarding production methods and …

Utah Strawberries: Consumer Consumption And Purchasing Preferences, Makaylie Langford, Kynda R. Curtis

All Current Publications

This fact sheet is the first of two discussing the results of a study on consumer preferences and willingness to pay (pricing) for fresh strawberries. The study was conducted on the Logan, Utah, campus of Utah State University (USU) in August 2024, and participants were recruited via campus emails, flyers, and social media posts targeted at the greater Logan community. A total of 116 study participants completed a sensory taste test of organically, locally, and conventionally grown strawberry samples, followed by a survey that included questions about their demographics, shopping habits, and familiarity with, as well as beliefs about, various …

Transition To Organic: Alfalfa Production In Utah, Earl Creech, Ryan Larsen, Marion Murray, Jennifer R. Reeve, Michele Schahczenski

All Current Publications

Transitioning to organic production may not require drastic operational changes on the part of the producer, as alfalfa production lends itself to more organic practices by default. Producers may decide to transition to certified organic production to capture organic price premiums, access niche market opportunities, reduce the use of synthetic inputs, meet growing consumer demand, enact personal values around environmental stewardship, and support soil and biodiversity conservation. Whatever a grower’s motivation, this fact sheet covers transitioning to organic production through understanding organic production systems, the National Organic Program (NOP) regulations, and crop-specific considerations.

Utah Strawberries: Consumer Preferences For Specialty Labels, Kynda R. Curtis, Makaylie Langford

All Current Publications

This fact sheet is the second of two discussing the results of a study on consumer preferences and willingness to pay (pricing) for fresh strawberries. This fact sheet highlights how specialty labeling influences consumers’ perceptions and willingness to pay. The study was conducted at Utah State University (USU) in August 2024.The study examines familiarity with production and labeling programs, as well as perceptions of local and organic food.

Mulberry Leaf Disease Detection By Cnn-Vit With Xai Integration, Mohammad Asif Hasan, Fariha Haque, Hasan Sarker, Rafae Abdullah, Tonmoy Roy, Nishat Taaha, Yeasin Arafat, Abdul Karim Patwary, Mominul Ahsan, Julfikar Haider

Instructional Technology and Learning Sciences Faculty Publications

Mulberry leaf disease detection is vital for maintaining the health and productivity of mulberry crops. In this paper, a novel approach was proposed by integrating explainable artificial intelligence (XAI) techniques with a convolutional neural network (CNN) and vision transformer (ViT) for effective mulberry leaf disease classification with three disease classes. Initially, in this proposed CNN-ViT model, features are extracted using a customized CNN architecture, and then the extracted features are fed into ViT for leaf disease classification in a more streamlined approach. The CNN-ViT model achieved promising results with a projection dimension of 64, utilizing 8 heads and 8 transformer …

Suggested Vegetable Planting Dates For Utah, Shawn Olsen

All Current Publications

This fact sheet provides suggested planting dates for vegetables in various areas throughout Utah. It also identifies resources for starting seeds at home.

Enhancing Stability And Emissions In Metal Halide Perovskite Nanocrystals Through Mn2+ Doping, Thi Thu Trinh Phan, Thi Thuy Kieu Nguyen, Trung Kien Mac, Minh Tuan Trinh

Chemistry and Biochemistry Student Research

Metal halide perovskite (MHP) nanocrystals (NCs) offer great potential for high-efficiency optoelectronic devices; however, they suffer from structural softness and chemical instability. Doping MHP NCs can overcome this issue. In this work, we synthesize Mn-doped methylammonium lead bromide (MAPbBr₃) NCs using the ligand-assisted reprecipitation method and investigate their structural and optical stability. X-ray diffraction confirms Mn²⁺ substitution at Pb²⁺ sites and lattice contraction. Photoluminescence (PL) measurements show a blue shift, significant PL quantum yield enhancement, reaching 72% at 17% Mn²⁺ doping, and a 34% increase compared to undoped samples, attributed to effective defect passivation and …

Tube-Feeding A Calf, Cheyenne Reid, Reganne K. Briggs, Melanie Heaton, Rebekah Esplin, David Secrist

All Current Publications

Producers may need to tube-feed a newborn calf to provide milk if calves are unable to nurse or suck from the nipple bottle or when calves are sick and need electrolytes. This fact sheet outlines the materials required and the steps to successfully tube-feed a calf.

Warming A Calf, Cheyenne Reid, Reganne K. Briggs, Melanie Heaton, Rebekah Esplin, David Secrist

All Current Publications

Calves born in the winter or spring are often exposed to harsh weather and environmental conditions. After birth, calves may become chilled due to cold temperatures or not being dried off promptly. A chilled calf may be experiencing hypothermia. This fact sheet explains the different types of hypothermia and methods for warming a calf until it can be safely returned outside.

Sexual And Vegetative Recruitment Of Trembling Aspen Following A High-Severity Boreal Wildfire, Denyse A. Dawe, Ellen Whitman, Michael Michaelian, Alan J. Tepley, Marc-André Parisien

Aspen Bibliography

Background High-severity fire is rare in trembling aspen-dominated forests of the boreal region. The post-fire recruitment strategy of aspen, by either vegetative suckering or sexually (i.e., by seed), has considerable implications for subsequent forest structure, genetic diversity, and ecological resilience to shifting climatic and disturbance regimes. In this study, we take advantage of the unique opportunity provided by the Chuckegg Creek Wildfire Fire (310,000 ha) in northern Alberta, Canada, which burned at high severity through aspen stands before and after spring green-up, to document how phenology, fire severity, and stand characteristics affect recruitment one year following the fire.

Results We …

Factors Impacting The Variability Of Post-Fire Forest Regeneration In Central European Pine Plantations, Florent Jouy, Maren Schüle, Yojana Adhikari, Anja Binder, Danica Clerc, Werner Gerwin, Thilo Heinken, Thomas Raab, Frank Repmann, Susanne Rönnefarth, Marina Schirrmacher, Marie-Therese Schmehl, Jens Schröder, Pierre L. Ibisch

Aspen Bibliography

Fire is increasingly posing a risk to forests and plantations, even in the temperate latitudes of central Europe. Little is known about fire ecology in this region, and therefore, appropriate approaches for the management and reforestation of burned sites are mostly lacking. In a Scots pine plantation region in Brandenburg (northeast Germany), the early tree regeneration of two nearby areas that burned 1 year apart was investigated. We observed that 3 years after the fire events, the forest in one study area showed a relatively high regeneration with a mean density of 7765 saplings/ha, clearly dominated by European aspen (93%); …

Thousand Cankers Disease Of Walnut (Geosmithia Morbida), Claudia Nischwitz, Marion Murray

All Current Publications

No abstract provided.

Causes Of Heterozygosity Excess: The Case Of Mexican Populations Of Populus Tremuloides, Javier Hernández-Velasco, José Ciro Hernández-Díaz, Sergio Leonel Simental-Rodríguez, Juan P. Jaramillo-Correa, David S. Gernandt, José Jesús Vargas-Hernández, Ilga Porth, Roos Goessen, M. Socorro Gonzáles-Elizondo, Matthias Fladung, Cuauhtémoc Sáenz-Romero, José Guadalupe Martínez-Ávalos, Artemio Carrillo-Parra, Eduardo Mendoza-Maya, Arnulfo Blanco-García, Christian Wehenkel

Aspen Bibliography

The presence of heterozygous individuals in a population is crucial for maintaining genetic diversity, which can positively affect fitness and adaptability to environmental changes. While inbreeding generally reduces the proportion of heterozygous individuals in a population, polyploidy tends to increase the proportion. North American Populus tremuloides is one of the most widely distributed and ecologically important tree species in the Northern Hemisphere. However, genetic variation in Mexican populations of P. tremuloides, including the genetic signatures of their adaptation to a variety of environments, remains largely uncharacterized. The aim of this study was to analyze how inbreeding coefficient (F …

Design, Implementation, And Reflection From An Interdisciplinary Course In Museum Studies, Brenna L. Decker

Journal on Empowering Teaching Excellence

Access the online Pressbooks version of this introduction here.

In Spring of 2023, I developed a special topics course titled Collection Material Handling to introduce students to museum management using Utah State University collections on the Logan, UT campus. The cross-listed upper-level course brought 16 USU students together from two disciplines: anthropology and natural sciences. The publication details how I used various learning theories to guide the creation of course content and how I structured and implemented activities in the classroom and in the collections. Examples of worksheets, activities, student feedback, and recommended improvements to assignments are provided. I encourage …

Evaluating A Proprietary Tannin-Blend Product As An Alternative To Monensin And Tylosin Phosphate In Feedlot Cattle Diets, Luana D. Felizari, Luke K. Fuerniss, Jonathon L. Beckett, David S. Secrist, Guy D. Hufstedler, Bradley J. Johnson

Animal, Dairy, and Veterinary Science Faculty Publications

This study evaluates the effects of a proprietary tannin blend (BX), supplemented with or without sodium monensin (MON), on beef cattle performance, carcass traits, and health. Steers (n = 2986; initial shrunk body weight (SBW) 254 ± 9.2 kg) were allocated into 48 pens (61–62 steers/pen; 12 pens/treatment) fed for 230 d. Treatments included (1) no feed additives (CTL); (2) BX (7.95 g/animal daily); (3) MON + Tylosin phosphate (TYL; 437.52 mg MON/animal daily + 80 mg TYL/animal daily); or (4) MON+BX (437.52 mg MON/animal daily + 7.95 g BX/animal daily). Data were analyzed in R 4.2.1 using a …

Establishing Methods For In Vitro Static Culture Of Gut Microbiomes For Nutritional Intervention Studies, Jeremy Mathew Case

Undergraduate Honors Capstone Projects

Lipid oxidation products (LOPs), which form during high-heat processing of oils common in Western diets, are known to cause inflammation and cellular damage. While LOPs have been implicated in exacerbating colitis and promoting colon tumorigenesis in mouse models, their direct impact on the gut microbiome remains poorly understood. This capstone project aimed to develop a low-cost in vitro protocol to culture the mouse gut microbiome under anaerobic conditions, enabling future investigations into the direct effects of bioactive dietary compounds such as LOPs. The study also assessed whether viable microbial communities could be recovered from fecal samples stored at -80°C. Fecal …

Phylogeny And Historical Biogeography Of Uroleucon Aphids, Audrey Michelle Mullen

Undergraduate Honors Capstone Projects

The aphid genus Uroleucon (Aphididae: Aphidinae: Macrosiphini) is a diverse group of about 230 species found globally in most temperate regions, principally in the northern hemisphere. Only 23 species are described from the southern hemisphere, in South American temperate regions such as Chile, Argentina, and Peru. However, the origins of the South American species are unknown, as are the relationships of these taxa to northern hemisphere Uroleucon species. This study seeks to establish the relationships between Uroleucon aphids native to South America and their North American and Eurasian counterparts using genetic data. We use phylogenetic analysis of cytochrome c oxidase …

Adaptation Of Influenza A Virus Strains A/Anhui/1/2013 (H7n9) And A/Shanghai/1/2013 (H7n9) For Development Of Effective Mouse Models, Spencer T. Mullen

Undergraduate Honors Capstone Projects

The emergence of avian Influenza A (H7N9) virus strains in humans poses a significant threat to human health globally due to their pandemic potential, limited human immunity, and lack of virus-specific interventions. This capstone aims to address some of the limitations in antiviral research regarding Influenza A H7N9 virus by adapting two low-pathogenic virus strains A/Anhui/1/2013 (H7N9) and A/Shanghai/1/2013 (H7N9) to BALB/c mice through sequential passaging through lung tissue. Following 12 serial passages, increased virulence was observed as evidenced by increased virus replication, increased weight loss, and increased mortality in infected mice. Titration of the initial non-adapted virus isolates were …

Creating A Stat2 Knock-Out Rat With Crispr/Cas9 Using I-Gonad, Isabella Dejesus

Undergraduate Honors Capstone Projects

Through the use of genetically modified animals, a more holistic understanding of physiologic responses to various diseases and pathologies can be obtained^7,19. The STAT2 gene encodes a protein called Signal Transducer and Activator of Transcription 2 and is an excellent target for genetic manipulation due to its essential role in type I and III interferon signaling pathways¹¹. A member of the STAT family of transcription factors, this protein is directly involved in mediating cellular responses to various cytokines and growth factors, particularly those related to the innate immune response¹¹. While the STAT2 signaling pathway …

Investigation Of Immune/Performance Trade-Offs In Neonate Children's Pythons (Antaresia Childreni), Ellie Hartman

Undergraduate Honors Capstone Projects

Energetic costs and constraints are key considerations when analyzing an organism’s life history and may require trade-offs to be made between different life history traits. One of these trade-offs occurs between investment in immunity and performance. The purpose of this study is to discover if this trade-off influences behavior in neonate Children’s pythons (Antaresia childreni). We hypothesize that snakes undergoing an immune response will have reduced behaviors promoting survival. To test this hypothesis, neonate Children’s pythons were randomly assigned to receive an immune challenge of keyhole limpet hemocyanin (KLH) or a vehicle injection as a control. Two days …

Ethical Concerns And Implications Of Expanded Carrier Screening, Emily Andres

Undergraduate Honors Capstone Projects

The rapid evolution in the field of genetics is often met with uncertainty and skepticism. With the advancements in genetic technologies, expanded carrier screening (ECS) has emerged as a powerful tool in reproductive medicine. Traditionally, carrier screening was provided less broadly, often relying on ethnic-based approaches. However, further advancements have deemed this practice no longer equitable or widely accepted. While ECS provides prospective parents with insight into their genetic risk and may prevent severe genetic conditions, it also raises serious ethical questions for many. These concerns span medical, political, and societal facets including medicalization, defining severity, abortion, legislation, insurability, the …