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Utah State University

Biology Faculty Publications

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Full-Text Articles in Life Sciences

Fruits, Frugivores, And The Evolution Of Phytochemical Diversity, Susan R. Whitehead, Gerald F. Schneider, Ray Dybzinski, Annika S. Nelson, Mariana Gelambi, Elsa Jos, Noelle G. Beckman Jun 2021

Fruits, Frugivores, And The Evolution Of Phytochemical Diversity, Susan R. Whitehead, Gerald F. Schneider, Ray Dybzinski, Annika S. Nelson, Mariana Gelambi, Elsa Jos, Noelle G. Beckman

Biology Faculty Publications

Plants produce an enormous diversity of secondary metabolites, but the evolutionary mechanisms that maintain this diversity are still unclear. The interaction diversity hypothesis suggests that complex chemical phenotypes are maintained because different metabolites benefit plants in different pairwise interactions with a diversity of other organisms. In this synthesis, we extend the interaction diversity hypothesis to consider that fruits, as potential hotspots of interactions with both antagonists and mutualists, are likely important incubators of phytochemical diversity. We provide a case study focused on the Neotropical shrub Piper reticulatum that demonstrates: 1) secondary metabolites in fruits have complex and cascading effects for …


Sickness Behaviors Across Vertebrate Taxa: Proximate And Ultimate Mechanisms, Patricia C. Lopes, Susannah S. French, Douglas C. Woodhams, Sandra A. Binning May 2021

Sickness Behaviors Across Vertebrate Taxa: Proximate And Ultimate Mechanisms, Patricia C. Lopes, Susannah S. French, Douglas C. Woodhams, Sandra A. Binning

Biology Faculty Publications

There is nothing like a pandemic to get the world thinking about how infectious diseases affect individual behavior. In this respect, sick animals can behave in ways that are dramatically different from healthy animals: altered social interactions and changes to patterns of eating and drinking are all hallmarks of sickness. As a result, behavioral changes associated with inflammatory responses (i.e. sickness behaviors) have important implications for disease spread by affecting contacts with others and with common resources, including water and/or sleeping sites. In this Review, we summarize the behavioral modifications, including changes to thermoregulatory behaviors, known to occur in vertebrates …


Plant Single-Cell Metabolomics—Challenges And Perspectives, Leonardo Perez De Souza, Monica Borghi, Alisdair R. Fernie Nov 2020

Plant Single-Cell Metabolomics—Challenges And Perspectives, Leonardo Perez De Souza, Monica Borghi, Alisdair R. Fernie

Biology Faculty Publications

Omics approaches for investigating biological systems were introduced in the mid-1990s and quickly consolidated to become a fundamental pillar of modern biology. The idea of measuring the whole complement of genes, transcripts, proteins, and metabolites has since become widespread and routinely adopted in the pursuit of an infinity of scientific questions. Incremental improvements over technical aspects such as sampling, sensitivity, cost, and throughput pushed even further the boundaries of what these techniques can achieve. In this context, single-cell genomics and transcriptomics quickly became a well-established tool to answer fundamental questions challenging to assess at a whole tissue level. Following a …


Stream Dissolved Organic Matter In Permafrost Regions Shows Surprising Compositional Similarities But Negative Priming And Nutrient Effects, Ethan Wologo, Sarah Shakil, Scott Zolkos, Sadie Textor, Stephanie Ewing, Jane Klassen, Robert G. M. Spencer, David C. Podgorski, Suzanne E. Tank, Michelle A. Baker, Jonathan A. O'Donnell, Kimberly P. Wickland, Sydney S. W. Foks, Jay P. Zarnetske, Joseph Lee-Cullin, Futing Liu, Yuanhe Yang, Pirkko Kortelainen, Jaana Kolehmainen, Joshua F. Dean, Jorien E. Vonk, Robert M. Holmes, Gilles Pinay, Michaela M. Powell, Jansen Howe, Rebecca J. Frei, Samuel P. Bratsman, Benjamin W. Abbott Nov 2020

Stream Dissolved Organic Matter In Permafrost Regions Shows Surprising Compositional Similarities But Negative Priming And Nutrient Effects, Ethan Wologo, Sarah Shakil, Scott Zolkos, Sadie Textor, Stephanie Ewing, Jane Klassen, Robert G. M. Spencer, David C. Podgorski, Suzanne E. Tank, Michelle A. Baker, Jonathan A. O'Donnell, Kimberly P. Wickland, Sydney S. W. Foks, Jay P. Zarnetske, Joseph Lee-Cullin, Futing Liu, Yuanhe Yang, Pirkko Kortelainen, Jaana Kolehmainen, Joshua F. Dean, Jorien E. Vonk, Robert M. Holmes, Gilles Pinay, Michaela M. Powell, Jansen Howe, Rebecca J. Frei, Samuel P. Bratsman, Benjamin W. Abbott

Biology Faculty Publications

Permafrost degradation is delivering bioavailable dissolved organic matter (DOM) and inorganic nutrients to surface water networks. While these permafrost subsidies represent a small portion of total fluvial DOM and nutrient fluxes, they could influence food webs and net ecosystem carbon balance via priming or nutrient effects that destabilize background DOM. We investigated how addition of biolabile carbon (acetate) and inorganic nutrients (nitrogen and phosphorus) affected DOM decomposition with 28-day incubations. We incubated late-summer stream water from 23 locations nested in seven northern or high-altitude regions in Asia, Europe, and North America. DOM loss ranged from 3% to 52%, showing a …


Increasing Our Ability To Predict Contemporary Evolution, Patrik Nosil, Samuel M. Flaxman, Jeffrey L. Feder, Zachariah Gompert Nov 2020

Increasing Our Ability To Predict Contemporary Evolution, Patrik Nosil, Samuel M. Flaxman, Jeffrey L. Feder, Zachariah Gompert

Biology Faculty Publications

Classic debates concerning the extent to which scientists can predict evolution have gained new urgency as environmental changes force species to adapt or risk extinction. We highlight how our ability to predict evolution can be constrained by data limitations that cause poor understanding of deterministic natural selection. We then emphasize how such data limits can be reduced with feasible empirical effort involving a combination of approaches.


Seed-Transmitted Wheat Mosaic Virus In Sweet Corn In Utah, Claudia Nischwitz Jul 2020

Seed-Transmitted Wheat Mosaic Virus In Sweet Corn In Utah, Claudia Nischwitz

Biology Faculty Publications

Wheat mosaic virus (WMoV) (syn. High Plains virus) was first observed in corn in 1993 in Colorado, Idaho, Kansas, and Texas (Seifers et al. 1997). The virus causes chlorotic streaks and mosaic on corn foliage, and it stunts ear development. When infected early in the season, plants frequently die. There are anecdotal reports of reduced seed germination rates in infected seed lots. The host range of the virus includes corn, small grains, and yellow and green foxtail. The virus is transmitted by the wheat curl mite (Aceria tosichella Keifer 1969). Seed transmission of WMoV at extremely low rates was …


Brain Micrornas Among Social And Solitary Bees, Karen M. Kapheim, Beryl M. Jones, Eirik Søvik, Eckart Stolle, Robert M. Waterhouse, Guy Bloch, Yehuda Ben-Shahar Jul 2020

Brain Micrornas Among Social And Solitary Bees, Karen M. Kapheim, Beryl M. Jones, Eirik Søvik, Eckart Stolle, Robert M. Waterhouse, Guy Bloch, Yehuda Ben-Shahar

Biology Faculty Publications

Evolutionary transitions to a social lifestyle in insects are associated with lineage-specific changes in gene expression, but the key nodes that drive these regulatory changes are unknown. We examined the relationship between social organization and lineage-specific microRNAs (miRNAs). Genome scans across 12 bee species showed that miRNA copy-number is mostly conserved and not associated with sociality. However, deep sequencing of small RNAs in six bee species revealed a substantial proportion (20–35%) of detected miRNAs had lineage-specific expression in the brain, 24–72% of which did not have homologues in other species. Lineage-specific miRNAs disproportionately target lineage-specific genes, and have lower expression …


Morphological Evidence For An Oral Venom System In Caecilian Amphibians, Pedro Luiz Mailho-Fontana, Marta Maria Antoniazzi, Cesar Alexandre, Daniel Carvalho Pimenta, Juliana Mozer Sciani, Edmund D. Brodie Jr., Carlos Jared Jul 2020

Morphological Evidence For An Oral Venom System In Caecilian Amphibians, Pedro Luiz Mailho-Fontana, Marta Maria Antoniazzi, Cesar Alexandre, Daniel Carvalho Pimenta, Juliana Mozer Sciani, Edmund D. Brodie Jr., Carlos Jared

Biology Faculty Publications

Amphibians are known for their skin rich in glands containing toxins employed in passive chemical defense against predators, different from, for example, snakes that have active chemical defense, injecting their venom into the prey. Caecilians (Amphibia, Gymnophiona) are snake-shaped animals with fossorial habits, considered one of the least known vertebrate groups. We show here that amphibian caecilians, including species from the basal groups, besides having cutaneous poisonous glands as other amphibians do, possess specific glands at the base of the teeth that produce enzymes commonly found in venoms. Our analysis of the origin of these glands shows that they originate …


Investigating The Direct And Indirect Effects Of Forest Fragmentation On Plant Functional Diversity, Jenny Zambrano, Norbert J. Cordeiro, Carol Garzon-Lopez, Lauren Yeager, Claire Fortunel, Henry J. Ndangalasi, Noelle G. Beckman Jul 2020

Investigating The Direct And Indirect Effects Of Forest Fragmentation On Plant Functional Diversity, Jenny Zambrano, Norbert J. Cordeiro, Carol Garzon-Lopez, Lauren Yeager, Claire Fortunel, Henry J. Ndangalasi, Noelle G. Beckman

Biology Faculty Publications

Ongoing habitat loss and fragmentation alter the functional diversity of forests. Generalising the magnitude of change in functional diversity of fragmented landscapes and its drivers is challenging because of the multiple scales at which landscape fragmentation takes place. Here we propose a multi-scale approach to determine whether fragmentation processes at the local and landscape scales are reducing functional diversity of trees in the East Usambara Mountains, Tanzania. We employ a structural equation modelling approach using five key plant traits (seed length, dispersal mode, shade tolerance, maximum tree height, and wood density) to better understand the functional responses of trees to …


The Fire And Tree Mortality Database, For Empirical Modeling Of Individual Tree Mortality After Fire, C. Alina Cansler, Sharon M. Hood, J. Morgan Varner, Phillip J. Van Mantgem, Michelle C. Agne, Robert A. Andrus, Matthew P. Ayres, Bruce D. Ayres, Jonathan D. Bakker, Michael A. Battaglia, Barbara J. Bentz, Carolyn R. Breece, James K. Brown, Daniel R. Cluck, Tom W. Coleman, R. Gregory Corace Iii, W. Wallace Covington, Douglas S. Cram, James B. Cronan, Joseph E. Crouse, Adrian J. Das, Ryan S. Davis, Et Al. Jun 2020

The Fire And Tree Mortality Database, For Empirical Modeling Of Individual Tree Mortality After Fire, C. Alina Cansler, Sharon M. Hood, J. Morgan Varner, Phillip J. Van Mantgem, Michelle C. Agne, Robert A. Andrus, Matthew P. Ayres, Bruce D. Ayres, Jonathan D. Bakker, Michael A. Battaglia, Barbara J. Bentz, Carolyn R. Breece, James K. Brown, Daniel R. Cluck, Tom W. Coleman, R. Gregory Corace Iii, W. Wallace Covington, Douglas S. Cram, James B. Cronan, Joseph E. Crouse, Adrian J. Das, Ryan S. Davis, Et Al.

Biology Faculty Publications

Wildland fires have a multitude of ecological effects in forests, woodlands, and savannas across the globe. A major focus of past research has been on tree mortality from fire, as trees provide a vast range of biological services. We assembled a database of individual-tree records from prescribed fires and wildfires in the United States. The Fire and Tree Mortality (FTM) database includes records from 164,293 individual trees with records of fire injury (crown scorch, bole char, etc.), tree diameter, and either mortality or top-kill up to ten years post-fire. Data span 142 species and 62 genera, from 409 fires occurring …


How Many Tree Species Of Birch Are In Alaska? Implications For Wetland Designations, Carol A. Rowe, Robert W. Lichvar, Paul G. Wolf Jun 2020

How Many Tree Species Of Birch Are In Alaska? Implications For Wetland Designations, Carol A. Rowe, Robert W. Lichvar, Paul G. Wolf

Biology Faculty Publications

Wetland areas are critical habitats, especially in northern regions of North America. Wetland classifications are based on several factors, including the presence of certain plant species and assemblages of species, of which trees play a significant role. Here we examined wetland species of birch (Betula) in North America, with a focus on Alaska, and the use of birche tree species in wetland delineation. We sampled over 200 trees from sites, including Alaska, Alberta, Minnesota, and New Hampshire. We used genetic data from over 3000 loci detected by restriction site associated DNA analysis. We used an indirect estimate of …


Solution Blow Spinning Of Polyvinylidene Fluoride Based Fibers For Energy Harvesting Applications: A Review, Rasheed Atif, Jibran Khaliq, Madeleine Combrinck, Ahmed H. Hassanin, Nader Shehata, Eman Elnabawy, Islam Shyha Jun 2020

Solution Blow Spinning Of Polyvinylidene Fluoride Based Fibers For Energy Harvesting Applications: A Review, Rasheed Atif, Jibran Khaliq, Madeleine Combrinck, Ahmed H. Hassanin, Nader Shehata, Eman Elnabawy, Islam Shyha

Biology Faculty Publications

Polyvinylidene fluoride (PVDF)-based piezoelectric materials (PEMs) have found extensive applications in energy harvesting which are being extended consistently to diverse fields requiring strenuous service conditions. Hence, there is a pressing need to mass produce PVDF-based PEMs with the highest possible energy harvesting ability under a given set of conditions. To achieve high yield and efficiency, solution blow spinning (SBS) technique is attracting a lot of interest due to its operational simplicity and high throughput. SBS is arguably still in its infancy when the objective is to mass produce high efficiency PVDF-based PEMs. Therefore, a deeper understanding of the critical parameters …


Acoustic Energy Harvesting And Sensing Via Electrospun Pvdf Nanofiber Membrane, Nader Shehata, Ahmed H. Hassanin, Eman Elnabawy, Remya Nair, Sameer A. Bhat, Ishac Kandas May 2020

Acoustic Energy Harvesting And Sensing Via Electrospun Pvdf Nanofiber Membrane, Nader Shehata, Ahmed H. Hassanin, Eman Elnabawy, Remya Nair, Sameer A. Bhat, Ishac Kandas

Biology Faculty Publications

This paper introduces a new usage of piezoelectric poly (vinylidene fluoride) (PVDF) electrospun nanofiber (NF) membrane as a sensing unit for acoustic signals. In this work, an NF mat has been used as a transducer to convert acoustic signals into electric voltage outcomes. The detected voltage has been analyzed as a function of both frequency and amplitude of the excitation acoustic signal. Additionally, the detected AC signal can be retraced as a function of both frequency and amplitude with some wave distortion at relatively higher amplitudes and within a certain acoustic spectrum region. Meanwhile, the NFs have been characterized through …


Developmental Plasticity Shapes Social Traits And Selection In A Facultatively Eusocial Bee, Karen M. Kapheim, Beryl M. Jones, Hailin Pan, Cai Li, Brock A. Harpur, Clement F. Kent, Amro Zayed, Panagiotis Ioannidis, Robert M. Waterhouse, Callum Kingwell, Eckart Stolle, Arián Avalos, Guojie Zhang, W. Owen Mcmillan, William T. Wcislo May 2020

Developmental Plasticity Shapes Social Traits And Selection In A Facultatively Eusocial Bee, Karen M. Kapheim, Beryl M. Jones, Hailin Pan, Cai Li, Brock A. Harpur, Clement F. Kent, Amro Zayed, Panagiotis Ioannidis, Robert M. Waterhouse, Callum Kingwell, Eckart Stolle, Arián Avalos, Guojie Zhang, W. Owen Mcmillan, William T. Wcislo

Biology Faculty Publications

Developmental plasticity generates phenotypic variation, but how it contributes to evolutionary change is unclear. Phenotypes of individuals in caste-based (eusocial) societies are particularly sensitive to developmental processes, and the evolutionary origins of eusociality may be rooted in developmental plasticity of ancestral forms. We used an integrative genomics approach to evaluate the relationships among developmental plasticity, molecular evolution, and social behavior in a bee species (Megalopta genalis) that expresses flexible sociality, and thus provides a window into the factors that may have been important at the evolutionary origins of eusociality. We find that differences in social behavior are derived …


Outstanding Questions In Flower Metabolism, Monica Borghi, Alisdair R. Fernie May 2020

Outstanding Questions In Flower Metabolism, Monica Borghi, Alisdair R. Fernie

Biology Faculty Publications

The great diversity of flowers, their color, odor, taste, and shape, is mostly a result of the metabolic processes that occur in this reproductive organ when the flower and its tissues develop, grow, and finally die. Some of these metabolites serve to advertise flowers to animal pollinators, other confer protection towards abiotic stresses, and a large proportion of the molecules of the central metabolic pathways have bioenergetic and signaling functions that support growth and the transition to fruits and seeds. Although recent studies have advanced our general understanding of flower metabolism, several questions still await an answer. Here, we have …


Combining Experimental Evolution And Genomics To Understand How Seed Beetles Adapt To A Marginal Host Plant, Alexandre Rêgo, Samridhi Chaturvedi, Amy Springer, Alexandra M. Lish, Caroline L. Barton, Karen M. Kapheim, Frank J. Messina, Zachariah Gompert Apr 2020

Combining Experimental Evolution And Genomics To Understand How Seed Beetles Adapt To A Marginal Host Plant, Alexandre Rêgo, Samridhi Chaturvedi, Amy Springer, Alexandra M. Lish, Caroline L. Barton, Karen M. Kapheim, Frank J. Messina, Zachariah Gompert

Biology Faculty Publications

Genes that affect adaptive traits have been identified, but our knowledge of the genetic basis of adaptation in a more general sense (across multiple traits) remains limited. We combined population-genomic analyses of evolve-and-resequence experiments, genome-wide association mapping of performance traits, and analyses of gene expression to fill this knowledge gap and shed light on the genomics of adaptation to a marginal host (lentil) by the seed beetle Callosobruchus maculatus. Using population-genomic approaches, we detected modest parallelism in allele frequency change across replicate lines during adaptation to lentil. Mapping populations derived from each lentil-adapted line revealed a polygenic basis for …


Microbial Lag Phase Can Be Indicative Of, Or Independent From, Cellular Stress, Philip G. Hamill, Andrew Stevenson, Phillip E. Mcmullan, James P. Williams, Abiann D. R. Lewis, Sudharsan S., Kath E. Stevenson, Keith D. Farnsworth, Galina Khroustalyova, Jon Y. Takemoto, John P. Quinn, Alexander Rapoport, John E. Hallsworth Apr 2020

Microbial Lag Phase Can Be Indicative Of, Or Independent From, Cellular Stress, Philip G. Hamill, Andrew Stevenson, Phillip E. Mcmullan, James P. Williams, Abiann D. R. Lewis, Sudharsan S., Kath E. Stevenson, Keith D. Farnsworth, Galina Khroustalyova, Jon Y. Takemoto, John P. Quinn, Alexander Rapoport, John E. Hallsworth

Biology Faculty Publications

Measures of microbial growth, used as indicators of cellular stress, are sometimes quantified at a single time-point. In reality, these measurements are compound representations of length of lag, exponential growth-rate, and other factors. Here, we investigate whether length of lag phase can act as a proxy for stress, using a number of model systems (Aspergillus penicillioides; Bacillus subtilis; Escherichia coli; Eurotium amstelodami, E. echinulatum, E. halophilicum, and E. repens; Mrakia frigida; Saccharomyces cerevisiae; Xerochrysium xerophilum; Xeromyces bisporus) exposed to mechanistically distinct types of cellular stress including low water activity, …


Introduction To The Special Issue: The Role Of Seed Dispersal In Plant Populations: Perspectives And Advances In A Changing World, Noelle G. Beckman, Clare E. Aslan, Haldre S. Rogers Mar 2020

Introduction To The Special Issue: The Role Of Seed Dispersal In Plant Populations: Perspectives And Advances In A Changing World, Noelle G. Beckman, Clare E. Aslan, Haldre S. Rogers

Biology Faculty Publications

Despite the importance of seed dispersal as a driving process behind plant community assembly, our understanding of the role of seed dispersal in plant population persistence and spread remains incomplete. As a result, our ability to predict the effects of global change on plant populations is hampered. We need to better understand the fundamental link between seed dispersal and population dynamics in order to make predictive generalizations across species and systems, to better understand plant community structure and function, and to make appropriate conservation and management responses related to seed dispersal. To tackle these important knowledge gaps, we established the …


Dramatic Dietary Shift Maintains Sequestered Toxins In Chemically Defended Snakes, Tatsuya Yoshida, Rinako Ujiie, Alan H. Savitzky, Teppei Jono, Takato Inoue, Naoko Yoshinaga, Shunsuke Aburaya, Wataru Aoki, Hirohiko Takeuchi, Li Ding, Qin Chen, Chengquan Cao, Tein-Shun Tsai, Anslem De Silva, Dharshani Mahaulpatha, Et Al. Feb 2020

Dramatic Dietary Shift Maintains Sequestered Toxins In Chemically Defended Snakes, Tatsuya Yoshida, Rinako Ujiie, Alan H. Savitzky, Teppei Jono, Takato Inoue, Naoko Yoshinaga, Shunsuke Aburaya, Wataru Aoki, Hirohiko Takeuchi, Li Ding, Qin Chen, Chengquan Cao, Tein-Shun Tsai, Anslem De Silva, Dharshani Mahaulpatha, Et Al.

Biology Faculty Publications

Unlike other snakes, most species of Rhabdophis possess glands in their dorsal skin, sometimes limited to the neck, known as nucho-dorsal and nuchal glands, respectively. Those glands contain powerful cardiotonic steroids known as bufadienolides, which can be deployed as a defense against predators. Bufadienolides otherwise occur only in toads (Bufonidae) and some fireflies (Lampyrinae), which are known or believed to synthesize the toxins. The ancestral diet of Rhabdophis consists of anuran amphibians, and we have shown previously that the bufadienolide toxins of frog-eating species are sequestered from toads consumed as prey. However, one derived clade, the Rhabdophis nuchalis Group, has …


Invasive Vegetation Affects Amphibian Skin Microbiota And Body Condition, Obed HernáNdez-GóMez, Allison Q. Byrne, Alex R. Gunderson, Thomas S. Jenkinson, Clay F. Noss, Andrew P. Rothstein, Molly C. Womack, Erica B. Rosenblum Feb 2020

Invasive Vegetation Affects Amphibian Skin Microbiota And Body Condition, Obed HernáNdez-GóMez, Allison Q. Byrne, Alex R. Gunderson, Thomas S. Jenkinson, Clay F. Noss, Andrew P. Rothstein, Molly C. Womack, Erica B. Rosenblum

Biology Faculty Publications

Invasive plants are major drivers of habitat modification and the scale of their impact is increasing globally as anthropogenic activities facilitate their spread. In California, an invasive plant genus of great concern is Eucalyptus. Eucalyptus leaves can alter soil chemistry and negatively affect underground macro- and microbial communities. Amphibians serve as excellent models to evaluate the effect of Eucalyptus invasion on ground-dwelling species as they predate on soil arthropods and incorporate soil microbes into their microbiotas. The skin microbiota is particularly important to amphibian health, suggesting that invasive plant species could ultimately affect amphibian populations. To investigate the potential for …


In-Situ Gold–Ceria Nanoparticles: Superior Optical Fluorescence Quenching Sensor For Dissolved Oxygen, Nader Shehata, Ishac Kandas, Effat Samir Feb 2020

In-Situ Gold–Ceria Nanoparticles: Superior Optical Fluorescence Quenching Sensor For Dissolved Oxygen, Nader Shehata, Ishac Kandas, Effat Samir

Biology Faculty Publications

Cerium oxide (ceria) nanoparticles (NPs) have been proved to be an efficient optical fluorescent material through generating visible emission (~530 nm) under violet excitation. This feature allowed ceria NPs to be used as an optical sensor via the fluorescence quenching Technique. In this paper, the impact of in-situ embedded gold nanoparticles (Au NPs) inside ceria nanoparticles was studied. Then, gold–ceria NPs were used for sensing dissolved oxygen (DO) in aqueous media. It was observed that both fluorescence intensity and lifetime were changed due to increased concentration of DO. Added gold was found to enhance the sensitivity of ceria to DO …


Investigating The Relationship Between Corticosterone And Glucose In A Reptile, Lorin A. Neuman-Lee, Spencer B. Hudson, Alison C. Webb, Susannah S. French Jan 2020

Investigating The Relationship Between Corticosterone And Glucose In A Reptile, Lorin A. Neuman-Lee, Spencer B. Hudson, Alison C. Webb, Susannah S. French

Biology Faculty Publications

The glucocorticoid hormone corticosterone (CORT) has classically been used in ecophysiological studies as a proxy for stress and energy mobilization, but rarely are CORT and the energy metabolites themselves concurrently measured. To examine CORT's role in mobilizing glucose in a wild reptile, we conducted two studies. The first study measured natural baseline and stress-induced blood-borne CORT and glucose levels in snakes during spring emergence and again when snakes return to the denning sites in autumn. The second study manipulated the hypothalamic–pituitary–adrenal (HPA) axis in male snakes in the autumn by taking a baseline blood sample, then subjecting individuals to one …


Seed‐To‐Seedling Transitions Exhibit Distance‐Dependent Mortality But No Strong Spacing Effects In A Neotropical Forest, Philippe Marchand, Liza S. Comita, S. Joseph Wright, Richard Condit, Stephen P. Hubbell, Noelle G. Beckman Dec 2019

Seed‐To‐Seedling Transitions Exhibit Distance‐Dependent Mortality But No Strong Spacing Effects In A Neotropical Forest, Philippe Marchand, Liza S. Comita, S. Joseph Wright, Richard Condit, Stephen P. Hubbell, Noelle G. Beckman

Biology Faculty Publications

Patterns of seed dispersal and seed mortality influence the spatial structure of plant communities and the local coexistence of competing species. Most seeds are dispersed in proximity to the parent tree, where mortality is also expected to be the highest, because of competition with siblings or the attraction of natural enemies. Whereas distance‐dependent mortality in the seed‐to‐seedling transition was often observed in tropical forests, few studies have attempted to estimate the shape of the survival‐distance curves, which determines whether the peak of seedling establishment occurs away from the parent tree (Janzen–Connell pattern) or if the peak attenuates but remains at …


Variations In Tetrodotoxin Levels In Populations Of Taricha Granulosa Are Expressed In The Morphology Of Their Cutaneous Glands, Pedro Luiz Mailho-Fontana, Carlos Jared, Marta Maria Antoniazzi, Juliana Mozer Sciani, Daniel Carvalho Pimenta, James P. Strange, Taran Grant, Edmund D. Brodie Jr., Edmund D. Brodie Jr. Dec 2019

Variations In Tetrodotoxin Levels In Populations Of Taricha Granulosa Are Expressed In The Morphology Of Their Cutaneous Glands, Pedro Luiz Mailho-Fontana, Carlos Jared, Marta Maria Antoniazzi, Juliana Mozer Sciani, Daniel Carvalho Pimenta, James P. Strange, Taran Grant, Edmund D. Brodie Jr., Edmund D. Brodie Jr.

Biology Faculty Publications

Tetrodotoxin (TTX), one of the most toxic substances in nature, is present in bacteria, invertebrates, fishes, and amphibians. Marine organisms seem to bioaccumulate TTX from their food or acquire it from symbiotic bacteria, but its origin in amphibians is unclear. Taricha granulosa can exhibit high TTX levels, presumably concentrated in skin poison glands, acting as an agent of selection upon predatory garter snakes (Thamnophis). This co-evolutionary arms race induces variation in T. granulosa TTX levels, from very high to undetectable. Using morphology and biochemistry, we investigated differences in toxin localization and quality between two populations at the extremes …


Global Imprint Of Mycorrhizal Fungi On Whole-Plant Nutrient Economics, Colin Averill, Jennifer M. Bhatnagar, Michael C. Dietze, William D. Pearse, Stephanie N. Kivlin Oct 2019

Global Imprint Of Mycorrhizal Fungi On Whole-Plant Nutrient Economics, Colin Averill, Jennifer M. Bhatnagar, Michael C. Dietze, William D. Pearse, Stephanie N. Kivlin

Biology Faculty Publications

Mycorrhizal fungi are critical members of the plant microbiome, forming a symbiosis with the roots of most plants on Earth. Most plant species partner with either arbuscular or ectomycorrhizal fungi, and these symbioses are thought to represent plant adaptations to fast and slow soil nutrient cycling rates. This generates a second hypothesis, that arbuscular and ectomycorrhizal plant species traits complement and reinforce these fungal strategies, resulting in nutrient acquisitive vs. conservative plant trait profiles. Here we analyzed 17,764 species level trait observations from 2,940 woody plant species to show that mycorrhizal plants differ systematically in nitrogen and phosphorus economic traits. …


Larger Genomes Linked To Slower Development And Loss Of Late-Developing Traits, Molly C. Womack, Marissa J. Metz, Kim L. Hoke Oct 2019

Larger Genomes Linked To Slower Development And Loss Of Late-Developing Traits, Molly C. Womack, Marissa J. Metz, Kim L. Hoke

Biology Faculty Publications

Genome size varies widely among organisms and is known to affect vertebrate development, morphology, and physiology. In amphibians, genome size is hypothesized to contribute to loss of late-forming structures, although this hypothesis has mainly been discussed in salamanders. Here we estimated genome size for 22 anuran species and combined this novel dataset with existing genome size data for an additional 234 anuran species to determine whether larger genome size is associated with loss of a late-forming anuran sensory structure, the tympanic middle ear. We established that genome size is negatively correlated with development rate across 90 anuran species and found …


Piezoelastic Pvdf/Tpu Nanofibrous Composite Membrane: Fabrication And Characterization, Eman Elnabawy, Ahmed H. Hassanin, Nader Shehata, Anton Popelka, Remya Nair, Saifallah Yousef, Ishac Kandas Oct 2019

Piezoelastic Pvdf/Tpu Nanofibrous Composite Membrane: Fabrication And Characterization, Eman Elnabawy, Ahmed H. Hassanin, Nader Shehata, Anton Popelka, Remya Nair, Saifallah Yousef, Ishac Kandas

Biology Faculty Publications

Poly (vinylidene fluoride) nanofibers (PVDF NFs) have been extensively used in energy harvesting applications due to their promising piezoresponse characteristics. However, the mechanical properties of the generated fibers are still lacking. Therefore, we are presenting in this work a promising improvement in the elasticity properties of PVDF nanofibrous membrane through thermoplastic polyurethane (TPU) additives. Morphological, physical, and mechanical analyses were performed for membranes developed from different blend ratios. Then, the impact of added weight ratio of TPU on the piezoelectric response of the formed nanofibrous composite membranes was studied. The piezoelectric characteristics were studied through impulse loading testing where the …


Demographic Assessment Of The Triploid Parthenogenetic Lizard Aspidoscelis Neotesselatus At The Northern Edge Of Its Range, Lise M. Aubry, Douglas Eifler, Kaera Utsumi, Susannah S. French Aug 2019

Demographic Assessment Of The Triploid Parthenogenetic Lizard Aspidoscelis Neotesselatus At The Northern Edge Of Its Range, Lise M. Aubry, Douglas Eifler, Kaera Utsumi, Susannah S. French

Biology Faculty Publications

Aspidoscelis neotesselatus (Colorado Checkered Whiptail) is a hybrid-derived triploid parthenogenetic lizard with a natural range overlapping with six counties in southeastern Colorado, USA. It has also become established by anthropogenic causation in Grant County, Washington State, approximately 1,600 km northwest of its range in Colorado. Large parts of its natural range are within military reservations. Reduced genetic variation in all-female species makes them especially susceptible to environmental disturbances, such as military activities. At Fort Carson (FC), we estimated an abundance index via a catch-per-unit estimator, weekly survival using Cormack-Jolly-Seber models, and body condition and clutch size as indicators of population …


Phylogeny Of The Subfamilies Of Ichneumonidae (Hymenoptera), Andrew M.R. Bennett, Sophie Cardinal, Ian D. Gauld, David B. Wahl Aug 2019

Phylogeny Of The Subfamilies Of Ichneumonidae (Hymenoptera), Andrew M.R. Bennett, Sophie Cardinal, Ian D. Gauld, David B. Wahl

Biology Faculty Publications

A combined morphological and molecular phylogenetic analysis was performed to evaluate the subfamily relationships of the parasitoid wasp family Ichneumonidae (Hymenoptera). Data were obtained by coding 135 morphological and 6 biological characters for 131 exemplar species of ichneumonids and 3 species of Braconidae (the latter as outgroups). The species of ichneumonids represent all of the 42 currently recognized subfamilies. In addition, molecular sequence data (cytochrome oxidase I “DNA barcoding” region, the D2 region of 28S rDNA and part of the F2 copy of elongation factor 1-alpha) were obtained from specimens of the same species that were coded for morphology (1309 …


Loss Of Developmental Diapause As Prerequisite For Social Evolution In Bees, Priscila Karla Ferreira Santos, Maria Cristina Arias, Karen M. Kapheim Aug 2019

Loss Of Developmental Diapause As Prerequisite For Social Evolution In Bees, Priscila Karla Ferreira Santos, Maria Cristina Arias, Karen M. Kapheim

Biology Faculty Publications

Diapause is a physiological arrest of development ahead of adverse environmental conditions and is a critical phase of the life cycle of many insects. In bees, diapause has been reported in species from all seven taxonomic families. However, they exhibit a variety of diapause strategies. These different strategies are of particular interest since shifts in the phase of the insect life cycle in which diapause occurs have been hypothesized to promote the evolution of sociality. Here we provide a comprehensive evaluation of this hypothesis with phylogenetic analysis and ancestral state reconstruction (ASR) of the ecological and evolutionary factors associated with …