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Articles 871 - 900 of 10915
Full-Text Articles in Life Sciences
Comparison Of Bioactive Compounds Of Continental And Mediterranean Pomegranate Fruits And Its Application In Urban Gardening, Radenka Kolarov, Mirjana Ljubojevic, Jovana Sucur Elez, Mirjana Adakalic, Biljana Lazovic, Dejan Prvulovic, Sezai̇ Erci̇şli̇, Djordje Malencic
Comparison Of Bioactive Compounds Of Continental And Mediterranean Pomegranate Fruits And Its Application In Urban Gardening, Radenka Kolarov, Mirjana Ljubojevic, Jovana Sucur Elez, Mirjana Adakalic, Biljana Lazovic, Dejan Prvulovic, Sezai̇ Erci̇şli̇, Djordje Malencic
Turkish Journal of Agriculture and Forestry
With the significant increase in population in cities, the necessity of growing safe and functional food is of great importance. Pomegranate fruit has many valuable antioxidant properties. The subject of study was the pomegranate from the continental region (Sremski Karlovci, Serbia) and the Mediterranean region (Bar, Montenegro). We compared biochemically active compounds in genotypes from both locations. The analysis performed included total phenolics, tannins, flavonoid contents, proanthocyanidins, pigments chlorophyll a and chlorophyll b, as well as carotenoids. Analysis of vitamin C, titratable acidity, pH value, and total sugars were also performed. Two antioxidant tests were also conducted, including DPPH and …
Assessment Of Genetic Variability And Genetic Parameters Of Morphological And Agro-Physiological Traits In Camelina Sativa (L.), Farshad Fallah, Danial Kahrizi, Abbas Rezaeizad, Alireza Zebarjadi, Leila Zarei, Hülya Doğan
Assessment Of Genetic Variability And Genetic Parameters Of Morphological And Agro-Physiological Traits In Camelina Sativa (L.), Farshad Fallah, Danial Kahrizi, Abbas Rezaeizad, Alireza Zebarjadi, Leila Zarei, Hülya Doğan
Turkish Journal of Agriculture and Forestry
The present investigation was done to evaluate genetic variability and estimation of genetic parameters of morphological and agro-physiological traits in Camelina sativa (L.) using biometrical genetic techniques. For this purpose, 136 Camelina doubled haploid line genotypes were assessed in a randomized complete blocks design with three replicates in the Field Research, Razi University, Kermanshah, Iran, during the 2014-2015 cropping season. The results of the analysis of variance showed significant differences between the genotypes for all studied traits. High estimates of genetic gain and broad-sense heritability were observed for the number of pods per plant, the number of pods per main …
Determination Of Some Quality Properties And Antimicrobial Activities Of Kombucha Tea Prepared With Different Berries, Oktay Tomar
Determination Of Some Quality Properties And Antimicrobial Activities Of Kombucha Tea Prepared With Different Berries, Oktay Tomar
Turkish Journal of Agriculture and Forestry
Kombucha is a slightly sweet, acidic, carbonated, fermented beverage obtained by fermenting sugared tea (Camellia sinesis) with symbiotic bacteria. In the present study, kombucha was produced from black tea (Camellia sinensis), black grape (Vitis labrusca), black mulberry (Morus nigra), and rosehip (Rosa canina) fruits. Its physicochemical, microbiological, sensory properties and antimicrobial effects were investigated. During the fermentation, pH, Brix (%), viscosity, total antioxidant, and phenolic substance values decreased (p < 0.05). Total aerobic mesophilic bacteria (TAMB) and yeast/mold, Lactococcus/Streptococcus counts decreased, while the osmophilic yeast, acetic acid, and lactic acid bacterial counts increased (p < 0.05). The samples produced using black mulberry had the highest antibacterial activity (26.58 mm zone diameter), lowest minimum inhibitory concentration (MIC) (0.012 mg·L$^{-1}$), and minimum bactericidal concentration (MBC) (0.008 mg·L$^{-1}$) on Staphylococcus aureus. The highest …
Effects Of Growth Factor Deprivation On Mkn-45 Spheroid Cells, Özlem Türksoy, Gökhan Terzi̇oğlu
Effects Of Growth Factor Deprivation On Mkn-45 Spheroid Cells, Özlem Türksoy, Gökhan Terzi̇oğlu
Turkish Journal of Biology
Background/aim: Serum and growth factor deprivation, a common cellular stressor in solid tumors, arises upon irradiation, chemotherapy, and antiangiogenesis. Spheroid body culture aims to enrich cancer stem cells by using low attachment conditions and some growth factors, such as basic fibroblast growth factor and epidermal growth factor to support the spheroid formation in serum-free spheroid culture. However, spheroid culture without any growth factors can imitate the tumor environment more realistically. In this study, we aimed to identify the effect of growth factor deprivation on the MKN-45 gastric cancer cell line in terms of stemness characteristics. Materials and methods: The spheroids …
Analysis For Prioritizing Risk Status And Sustainable Utilization Of Cattle, Sheep, And Goat Breeds In Türkiye, Mesut Yildirir, Seyrani̇ Koncagül, Yasemi̇n Öner, Ayşe Oya Akin
Analysis For Prioritizing Risk Status And Sustainable Utilization Of Cattle, Sheep, And Goat Breeds In Türkiye, Mesut Yildirir, Seyrani̇ Koncagül, Yasemi̇n Öner, Ayşe Oya Akin
Turkish Journal of Veterinary & Animal Sciences
Animal Genetic Resources (AnGR) are a warranty for future unknown conditions and needs. Due to this fact, sustainable use and conservation of AnGR have special importance, and to achieve reliable programs for these goals, the risk status of AnGR should be estimated accurately. The aim of this study was to estimate the risk status for three widely used domesticated livestock species of cattle, sheep, and goat in animal production: 6 cattle, 33 sheep, and 15 goat breeds were included in the analysis. Extinction probability (z) was taken as a criterion for the risk status of each breed. Data collection based …
Effect Of Lipid-Enriched Diet Associated With Bovine Recombinant Somatotropin On Superovulation Response And Embryo Recovery In Heifers, Richelle Matos Oliveira, Anselmo Domingos Ferreira Santos, Francisco Palma Rennó, Camilla Mendonça Silva
Effect Of Lipid-Enriched Diet Associated With Bovine Recombinant Somatotropin On Superovulation Response And Embryo Recovery In Heifers, Richelle Matos Oliveira, Anselmo Domingos Ferreira Santos, Francisco Palma Rennó, Camilla Mendonça Silva
Turkish Journal of Veterinary & Animal Sciences
The current study aimed to evaluate the effects of soybean oil supplementation associated with the administration of bovine recombinant somatotropin (rBST) on the population of ovarian follicles, standardization of both the superovulation response and embryo recovery in heifers. We used 40 Holstein heifers submitted to a 2 × 2 factorial, forming the experimental groups: DC-SL (control diet plus saline solution application); OL-SL (diet with soybean oil plus saline application); DC-rBST (control diet plus application of 320 mg rBST) and OL-rBST (diet with soybean oil plus the application of 320 mg rBST). The animals received two applications of 500 mg of …
Phenotypic And Genotypic Characterization Of Antimicrobial Resistance In Commonly Isolated Salmonella Serovars From Chickens, Seyyi̇de Sariçam İnce, Mehmet Akan
Phenotypic And Genotypic Characterization Of Antimicrobial Resistance In Commonly Isolated Salmonella Serovars From Chickens, Seyyi̇de Sariçam İnce, Mehmet Akan
Turkish Journal of Veterinary & Animal Sciences
Salmonellosis caused by Salmonella agents is the second most common zoonotic infection in humans. In recent years, Salmonella's increasing antimicrobial resistance (AMR) has been a concern. The major transmission route of Salmonella is consumption of contaminated poultry products. Therefore, monitoring of antimicrobial resistance in chicken-originated Salmonella is critically important. This study investigated AMR in four commonly isolated Salmonella serovars from chickens, namely Salmonella Enteritidis (S. Enteritidis), Salmonella Infantis (S. Infantis), Salmonella Kentucky (S. Kentucky), and Salmonella Typhimurium (S. Typhimurium). A total of 133 isolates were examined by phenotypic and genotypic AMR characterization. Resistance to 14 different antimicrobials and eight …
Are The Mandible Shapes Of Common (Paradoxurus Hermaphroditus) And Golden (Paradoxurus Zeylonensis) Palm Civets Different? A Pilot Study, İftar Gürbüz, Yasi̇n Demi̇raslan, Channa Rajapaksha, Devaka K. Weerakoon, Saminda Fernando
Are The Mandible Shapes Of Common (Paradoxurus Hermaphroditus) And Golden (Paradoxurus Zeylonensis) Palm Civets Different? A Pilot Study, İftar Gürbüz, Yasi̇n Demi̇raslan, Channa Rajapaksha, Devaka K. Weerakoon, Saminda Fernando
Turkish Journal of Veterinary & Animal Sciences
In this study adult common and golden palm civet mandibles were analysed by geometric morphometric method. For this purpose, the materials were photographed in accordance with the procedure and analysed using computer programs. No allometric component was detected in the comparison of the mandibles. The first principal component defined 28.657% of the total shape variation in the mandibles of the two groups that were analysed with a total of 19 landmarks. The samples were largely separated from each other in the principal component analysis. The shape differences were mostly in the caudal of the mandible. Also, in the common palm …
Occurrence Of Staphylococcus Aureus In Milk And Antibacterial Properties Of Some Herbal Extracts On Milk And Hospital-Acquired Strains, Reza Ebrahimi Hariry, Gülçi̇n Akca, Ayhan Fi̇lazi̇
Occurrence Of Staphylococcus Aureus In Milk And Antibacterial Properties Of Some Herbal Extracts On Milk And Hospital-Acquired Strains, Reza Ebrahimi Hariry, Gülçi̇n Akca, Ayhan Fi̇lazi̇
Turkish Journal of Veterinary & Animal Sciences
Staphylococcus aureus is a remarkable infectious agent, and with the development of antibiotic resistance by S. aureus, finding new, effective, and safe alternative therapeutic options in animals and humans is crucially demanded. In this study, the occurrence of S. aureus was explored by collecting nonmastitis bovine milk samples first, and then the effects of herbal extracts on methicillinresistant S. aureus (MRSA) strains isolated from cow's milk and humans in the hospitals were investigated. The occurrences of S. aureus in bovine raw milk samples were 13.4%. All raw milk S. aureus isolates were fully susceptible to cefoxitin, ceftiofur, penicillin G, …
Efficacy Of Acacia Nilotica Bark Extract As An Alternative To Antibiotics In Broilers Challenged With Escherishia Coli From 15 To 28 Days, Muhammad Umer Zahid, Anjum Khalique, Shafqat Nawaz Qaisrani, Muhammad Ashraf, Ali Ahmad Sheikh, Muhammad Umar Yaqoob
Efficacy Of Acacia Nilotica Bark Extract As An Alternative To Antibiotics In Broilers Challenged With Escherishia Coli From 15 To 28 Days, Muhammad Umer Zahid, Anjum Khalique, Shafqat Nawaz Qaisrani, Muhammad Ashraf, Ali Ahmad Sheikh, Muhammad Umar Yaqoob
Turkish Journal of Veterinary & Animal Sciences
The present experiment was conducted to compare the effect of Acacia nilotica bark extract and antibiotic on different biological parameters in broilers challenged with E. coli. Five hundred 2-week-old broiler chicks were divided into five treatments (Cont, NC, PC, AN-BE3, and AN-BE5) with ten replicates per treatment (10 chicks per replicate), and the experiment was extended over 2 weeks. All chicks, except that of Cont were challenged with E. coli (10$^{7}$ CFU/bird). Cont: basal diet only; NC: challenged with E. coli; PC: NC + Zinc Bacitracin 50 mg/kg diet; AN-BE3: NC + A. nilotica bark extract supplementation 0.3%; …
Effects Of Use Of Conventional And Sexed Semen On Conception Rate, Calf Sex, Calf Birth Weight, And Stillbirth In Holstein Heifers, Tahi̇r Bayril
Effects Of Use Of Conventional And Sexed Semen On Conception Rate, Calf Sex, Calf Birth Weight, And Stillbirth In Holstein Heifers, Tahi̇r Bayril
Turkish Journal of Veterinary & Animal Sciences
Pregnancy rate is low in artificial insemination with sexed semen compared to conventional semen. This situation poses a major problem for dairy farms. The aim of this study was to determine the effects of semen type on conception rate, calf sex and birth weight, stillbirth, pregnancy loss, and postpartum maternal body weight (MBW) in Holstein heifers inseminated with sexed (n = 229), and conventional semen (n = 153). The female and male calf ratios of the heifers inseminated with sexed and conventional semen were found to be 88% to 54.8% and 12% to 45.2%, respectively. There was a significant difference …
Effects Of Free Capric Acid, Lauric Acid, And Coconut Oil Supplementation On Performance, Carcass, And Some Blood Biochemical Parameters Of Broiler Chickens, Mehmet Demi̇rci̇, Şevket Evci̇, Mehmet Aki̇f Karsli, Ali̇ Şenol
Effects Of Free Capric Acid, Lauric Acid, And Coconut Oil Supplementation On Performance, Carcass, And Some Blood Biochemical Parameters Of Broiler Chickens, Mehmet Demi̇rci̇, Şevket Evci̇, Mehmet Aki̇f Karsli, Ali̇ Şenol
Turkish Journal of Veterinary & Animal Sciences
In this study, it was aimed to investigate the effects of the addition of free capric (decanoic, C10:0) and lauric (dodecanoic, C12:0) acids and coconut (Cocos nucifera) oil to the broiler diets on performance, carcass yield, internal organ weights and some blood parameters. A total of 144 day-old broiler chicks (Ross 308) were used in the study, and four main groups were formed with four subgroups containing equal number of chicks. The control (C) group was fed with basal diet without any supplementation and the experimental groups were fed with 0.4% free capric acid (CA)-, lauric acid (LA)-, …
Arterial Vascularization Of The Spleen In Merino Sheep, Melek Tosun, Şükrü Hakan Atalgin
Arterial Vascularization Of The Spleen In Merino Sheep, Melek Tosun, Şükrü Hakan Atalgin
Turkish Journal of Veterinary & Animal Sciences
In this study, it is aimed to reach detailed information about the anatomy of arteries in the sheep spleen, which can be used as an example and model for the success of planned or emergency surgical interventions related to the spleen. In spleen injuries, the spleen may be divided into two or three parts, or it may be limited to cracks on the spleen. In particular, it is aimed to protect the organs that have been damaged by trauma recently. Operations such as splenectomy and splenography are surgical procedures that require good knowledge of the pathways of artery and its …
Effects Of Feeding In Different Quality Rangelands On Meat Quality And Fatty Acids Composition In Angora Goat Kids And Young Bucks, Betül Zehra Sariçi̇çek
Effects Of Feeding In Different Quality Rangelands On Meat Quality And Fatty Acids Composition In Angora Goat Kids And Young Bucks, Betül Zehra Sariçi̇çek
Turkish Journal of Veterinary & Animal Sciences
The effects of feeding in different quality rangelands on meat quality and fatty acids composition in Angora goat kids and bucks were determined. Twenty male Angora goat kids were selected from each farm that produces Angora goats in the area. There are three separate rangelands with previously determined quality classes (good, medium, and low-quality). In each farm, among these animals grazed completely on the rangeland, 7 heads from 4-month-old kids and 7 heads from 7-month-old bucks were selected and slaughtered. The Longissimus thoracis muscle was removed for meat quality measurement. The increased rangeland quality increased the protein content of kid's …
Examination Of Canine Herpesvirus-1 In Dogs By Serological, Molecular, And Pathological Methods, Serkan Yildirim, Fatma Gülten Bayraktar, Hakan Aydin, Yavuz Seli̇m Sağlam, Gi̇zem Eser, Muhammet Bahaeddi̇n Dörtbudak
Examination Of Canine Herpesvirus-1 In Dogs By Serological, Molecular, And Pathological Methods, Serkan Yildirim, Fatma Gülten Bayraktar, Hakan Aydin, Yavuz Seli̇m Sağlam, Gi̇zem Eser, Muhammet Bahaeddi̇n Dörtbudak
Turkish Journal of Veterinary & Animal Sciences
In this study, it was aimed to examine Canine Herpesvirus-1 (CHV-1) with different diagnostic methods and investigate the pathological changes in positive samples. For this purpose, 100 dog uteruses of different ages and breeds, were removed by ovariohysterectomy and their blood samples were used as the study material. Enzyme-linked immunosorbent assay (ELISA) and Indirect Fluorescent Antibody Test (IFAT) for serological diagnosis, polymerase chain reaction (PCR) method for molecular diagnosis, immunohistochemistry (IHC) and immunofluorescence (IF) staining for immunopathological diagnosis were performed on the samples. Additionally, hematoxylin and eosin (HE) staining was performed to examine the histopathological changes in the CHV- 1-positive …
Genetic Parameters Of Growth, Reproductive, And Productive Characteristics In Anatolian Buffaloes, Yusuf Kaplan, Mustafa Tekerli̇
Genetic Parameters Of Growth, Reproductive, And Productive Characteristics In Anatolian Buffaloes, Yusuf Kaplan, Mustafa Tekerli̇
Turkish Journal of Veterinary & Animal Sciences
It was aimed to investigate the genetic parameters in growth, fertility, and productivity of Anatolian buffaloes maintained at private farms of Yozgat. A total of 1139 buffalo cows and their calves were used in the study. The weights at birth, weaning, 6th and 12th months of age, and daily live weight gains (DLWG) of buffalo calves born from 2015 to 2019 were recorded. Calving interval (CI) and service period (SP), lactation milk yield (LMY), milk yield per day of lactation period (MYPDLP), milk yield per day of calving interval (MYPDCI), peak yield (PY), a day at peak yield (DPY) and …
Modeling Of Individual Egg Weights Of Lohmann-Brown Layer Hens, Esra Yavuz, Samet Hasan Abaci, Kadi̇r Erensoy, Mustafa Şahi̇n
Modeling Of Individual Egg Weights Of Lohmann-Brown Layer Hens, Esra Yavuz, Samet Hasan Abaci, Kadi̇r Erensoy, Mustafa Şahi̇n
Turkish Journal of Veterinary & Animal Sciences
This study was carried out to determine the most suitable model for egg weights of the Cubic, Gompertz, Logistics, Gamma, Richard, Piecewise Quadratic, Orscov, and Sigmoaidal models, which are widely used in estimation. Lohmann-Brown Classic laying hens raised in Ondokuz Mayıs University Research and Application farm were used as animal material. In the modeling of egg weights of 351 layer hens raised in 3-storey cages, individual egg weight data measured at weekly intervals, 32 on the 1st floor, 17 on the 2nd floor, and 27 on the 3rd floor, were taken into account, and a total of 76 hens' individual …
The Effect Of Saccharomyces Cerevisiae As A Probiotic On The Nutrient Degradability Of Some Commonly Feedstuffs Used In Turkey, Muslimo Abdullahi Sheikh Hassan, Mehmet Aki̇f Karsli
The Effect Of Saccharomyces Cerevisiae As A Probiotic On The Nutrient Degradability Of Some Commonly Feedstuffs Used In Turkey, Muslimo Abdullahi Sheikh Hassan, Mehmet Aki̇f Karsli
Turkish Journal of Veterinary & Animal Sciences
The objective of this study was to evaluate the effects of Saccharomyces cerevisiae as a probiotic on in situ ruminal DM, OM, CP and starch degradability values in some energy and protein sources commonly used in ruminant nutrition. In this study, the in situ degradation kinetics and fractions of dry matter, organic matter, crude protein, and starch of 6 different feedstuffs (barley, wheat, corn, sunflower seed meal, cottonseed meal and soybean meal) commonly used in animal nutrition were determined. Three ruminally cannulated Bafra sheep were used in the experiment. The experiment was designed as carryover experimental design with two periods. …
Investigation Of The In Vitro Antioxidant Activity Of Fermented Tomato Pruning Residues And Its Effects On Biochemical And Hematological Parameters Of Rats, Bariş Denk, Beyza Aydoğan, İsmai̇l Bayram, Abdurrahman Fati̇h Fi̇dan
Investigation Of The In Vitro Antioxidant Activity Of Fermented Tomato Pruning Residues And Its Effects On Biochemical And Hematological Parameters Of Rats, Bariş Denk, Beyza Aydoğan, İsmai̇l Bayram, Abdurrahman Fati̇h Fi̇dan
Turkish Journal of Veterinary & Animal Sciences
In the tomato greenhouse production process, a by-product emerges in the form of greenhouse residues. One of these residues is leaf pruning residue, which poses an environmental pollution problem in terms of waste management. The purpose of this work was to investigate the use of fermented tomato leaves (FTL) as an animal feed additive and its potential to mitigate the environmental pollution problem caused by greenhouse pruning residues. The pruning residues were fermented and their in vitro antioxidant activity (AOA) levels were analyzed using 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS), 2,2-diphenyl-1-picryl-hydrazylhydrate (DPPH), reducing power (RP), and total phenolic content (TPC) assays. Wistar albino …
Investigation Of Snps In Bmp15 And Gdf9 Genes In "Çepni" And "Of" Sheep In The Black Sea Region Of Turkey, Koray Kirikçi
Investigation Of Snps In Bmp15 And Gdf9 Genes In "Çepni" And "Of" Sheep In The Black Sea Region Of Turkey, Koray Kirikçi
Turkish Journal of Veterinary & Animal Sciences
Sheep fertility genes have been studied in Turkey for many years. But so far it cannot be said that a satisfactory result has been achieved in terms of the number of detected polymorphisms on fertility genes. Exhibiting the genetic structure of local gene resources adapted to a particular region is very important for sustainability, conservation and breeding studies, and many other issues such as profitability. Therefore, the primary aim of this study was to investigate the single nucleotide polymorphisms (SNPs) on the BMP15 and GDF9 genes in two new Turkish sheep breeds, Çepni and Of. DNA sequencing was performed to …
The First Record Of Philophthalmus Lucipetus (Trematoda: Philophthalmidae) In The Great Egret (Ardea Alba) From Turkey, Mehmet Öztürk, Şi̇nasi̇ Umur
The First Record Of Philophthalmus Lucipetus (Trematoda: Philophthalmidae) In The Great Egret (Ardea Alba) From Turkey, Mehmet Öztürk, Şi̇nasi̇ Umur
Turkish Journal of Veterinary & Animal Sciences
The genus Philophthalmus, Looss 1899 (Echinostoma: Philophthalmidae) is a cosmopolitan group of parasites that infects the eyes of birds and mammals, including humans. A great egret (Ardea alba) was found dead in Kızılırmak Delta, Samsun, Turkey. The bird was transported to the Faculty of Veterinary Medicine, Ondokuz Mayıs University, Samsun Turkey, for a necropsy. In the parasitological examination, a trematode was detected in the eye, and then it was identified as Philophthalmus lucipetus. This is the first report of the zoonotic parasite P. lucipetus in Turkey.
Plant Nutrient Contents And Spatial Distribution Patterns Of Toxic Element Concentrations In Mine Site Soils, Gülşen Tozsi̇n, Taşkin Öztaş
Plant Nutrient Contents And Spatial Distribution Patterns Of Toxic Element Concentrations In Mine Site Soils, Gülşen Tozsi̇n, Taşkin Öztaş
Turkish Journal of Agriculture and Forestry
Open-pit coal mining causes land and soil degradation and negatively affects soil properties. It is of great importance to determine variabilities in soil properties of the abandoned area after the mine is closed and to bring it back to nature by implementing appropriate rehabilitation programs. The aim of this study was to evaluate plant nutrient availability and toxic element pollution in an abandoned coal mine site. The results indicated that the amounts of plant-available P and K are quite low (<90 kg P2O5 ha-1) and low to moderate (<170 kg K2O ha-1), respectively. The concentrations …
The Effect Of Immobilized Chitinase Enzyme On The Biocontrol Of Sitophilus Zeamais, Nesli̇han Di̇kbaş, Sevda Uçar, Göksel Tozlu, Tuba Öznülüer Özer, Recep Kotan
The Effect Of Immobilized Chitinase Enzyme On The Biocontrol Of Sitophilus Zeamais, Nesli̇han Di̇kbaş, Sevda Uçar, Göksel Tozlu, Tuba Öznülüer Özer, Recep Kotan
Turkish Journal of Agriculture and Forestry
Microbial enzymes produced using biological processes are of great importance due to their contribution to sustainable solutions for agricultural production. In our previous study, the chitinase enzyme from Lactobacillus coryniformis was purified, immobilized to zinc oxide (ZnO) nanoparticles, and its effectiveness as a bioinsecticide against the storage pest Sitophilus zeamais Motschulsky, 1855 (Coleoptera: Curculionidae) was determined by forming a nanoformulation. In this study, the effectiveness of immobilized chitinase (nanoformulation), free chitinase, malathion, ZnO, and L. coryniformis on intestinal enzymes such as alkaline phosphatase (ALP), adenosine triphosphatase (ATPase), and lactate dehydrogenase (LDH) were tested to elucidate some of the mechanism of …
Transcriptomic Profiling Of Mice Brain Under Bex3 Regulation, Zhimin Xu, Noor Bahadar, Yingxin Zhang, Shuang Tan, Zhongze Wang, Bingyi Ren, Shitao Liu, Huanyan Dai, Yaowu Zheng, Bing Han
Transcriptomic Profiling Of Mice Brain Under Bex3 Regulation, Zhimin Xu, Noor Bahadar, Yingxin Zhang, Shuang Tan, Zhongze Wang, Bingyi Ren, Shitao Liu, Huanyan Dai, Yaowu Zheng, Bing Han
Turkish Journal of Biology
BEX family genes are expressed in various tissues and play significant roles in neuronal development. A mouse model of Bex3 gene knock-out was generated in this study, using the CRISPR-Cas9 system. Transcriptomic analysis of the brain was performed to identify genes and pathways under Bex3 regulation. Essential biological functions under the control of Bex3 related to brain development were identified. Ninety-five genes were differentially expressed under Bex3-/- regulation, with 53 down and 42 up. Among down-regulated genes, LOC102633156 is a member of zf-C2H2, Xlr3a is an X-linked lymphocyte regulated gene, LOC101056144 is a hippocampal related gene, 2210418O10Rik and Fam205a3 are …
Noncoding Rnas In Apoptosis: Identification And Function, Özge Tüncel, Merve Kara, Bi̇lge Yaylak, İpek Erdoğan, Bünyami̇n Akgül
Noncoding Rnas In Apoptosis: Identification And Function, Özge Tüncel, Merve Kara, Bi̇lge Yaylak, İpek Erdoğan, Bünyami̇n Akgül
Turkish Journal of Biology
Apoptosis is a vital cellular process that is critical for the maintenance of homeostasis in health and disease. The derailment of apoptotic mechanisms has severe consequences such as abnormal development, cancer, and neurodegenerative diseases. Thus, there exist complex regulatory mechanisms in eukaryotes to preserve the balance between cell growth and cell death. Initially, protein-coding genes were prioritized in the search for such regulatory macromolecules involved in the regulation of apoptosis. However, recent genome annotations and transcriptomics studies have uncovered a plethora of regulatory noncoding RNAs that have the ability to modulate not only apoptosis but also many other biochemical processes …
Modeling Of C-Terminal Tail Of Human Sting And Its Interaction With Tank-Binding Kinase 1, Rahaf Ata Ouda Al-Masri, Hajara Audu-Bida, Şebnem Eşsi̇z
Modeling Of C-Terminal Tail Of Human Sting And Its Interaction With Tank-Binding Kinase 1, Rahaf Ata Ouda Al-Masri, Hajara Audu-Bida, Şebnem Eşsi̇z
Turkish Journal of Biology
Stimulator of interferon genes (STING) plays a significant role in a cell's intracellular defense against pathogens or self-DNA by inducing inflammation or apoptosis through a pathway known as cGAS-cGAMP-STING. STING uses one of its domains, the C-terminal tail (CTT) to recruit the members of the pathway. However, the structure of this domain has not been solved experimentally. STING conformation is open and more flexible when inactive. When STING gets activated by cGAMP, its conformation changes to a closed state covered by 4 beta-sheets over the binding site. This conformational change leads to its binding to Tank-binding kinase 1 (TBK1). TBK1 …
Ubiquitin Specific Protease 7 Maintains Pluripotency Of Mouse Embryonic Stem Cells Through Stabilization Of Ss-Catenin, Taha Bartu Hayal
Ubiquitin Specific Protease 7 Maintains Pluripotency Of Mouse Embryonic Stem Cells Through Stabilization Of Ss-Catenin, Taha Bartu Hayal
Turkish Journal of Biology
Embryonic stem cells (ESCs), which are derived from the undifferentiated inner cell mass of the embryo, can differentiate every cell type of the body regarding their pluripotency. Therefore, human or mouse ESCs can be used as an unlimited cell source for numerous researches or therapeutical approaches. However, pluripotency maintenance of ESCs during in vitro culture is challenging because of their endless differentiation capacity. In the current study, the effect of USP7 on pluripotency maintenance of mouse ESCs (mESCs) has been investigated with the help of cell viability assay, morphological analysis, alkaline phosphatase (ALP) staining, qPCR analysis, and Western Blotting. 600 …
P110Α Activity At The M-To-G1 Transition Is Critical For Cellular Proliferation And Reentry Into The Cell Cycle, Onur Çi̇zmeci̇oğlu
P110Α Activity At The M-To-G1 Transition Is Critical For Cellular Proliferation And Reentry Into The Cell Cycle, Onur Çi̇zmeci̇oğlu
Turkish Journal of Biology
Phosphoinositide 3-kinase (PI3K) signaling pathway is essential for normal physiology and is impaired in diseases such as premalignant hyperproliferative disorders, primary immunodeficiency, metabolic disorders, and cancer. Although the core PI3K pathway components are known today, a long-standing gap in our knowledge of PI3K signaling concerns how distinct PI3K isoforms and their activity patterns contribute to the functional consequences of pathway upregulation. In order to address this issue, we devised a molecular genetic cell model, which allowed temporal regulation of the indispensable PI3K isoform, p110α in distinct stages of the cell cycle. We found that late M and early G1 …
Cytoplasmically Localized Trna-Derived Fragments Inhibit Translationin Drosophila S2 Cells, Syed Muhammad Hamid, Bünyami̇n Akgül
Cytoplasmically Localized Trna-Derived Fragments Inhibit Translationin Drosophila S2 Cells, Syed Muhammad Hamid, Bünyami̇n Akgül
Turkish Journal of Biology
Transfer ribonucleic acids (tRNAs) serve not only as amino acid carriers during translation but also as a template for the biogenesis of short fragments that can regulate gene expression. Despite recent progress in the function of tRNA-derived fragments (tRFs), their intracellular localization, protein partners, and role in regulating translation are not well understood. We used synthetic tRFs to investigate their localization and function in Drosophila S2 cells. Under our experimental setting, all synthetic tRFs tested were localized at distinct sites within the cytoplasm in a similar manner in Drosophila S2 cells. Cytoplasmically-localized tRFs were positioned in close proximity to GW182 …
Sirna-Mediated Stathmin1 Silencing Inhibits Proliferation Of Prostate Carcinoma Cell Line, Asude Aksoy, Safi̇ye Selcen Vi̇cdanli, Ebru Önalan, Ahmet Tektemur, Gökhan Artaş, Asuman Orhan Varoğlu, Mustafa Koç
Sirna-Mediated Stathmin1 Silencing Inhibits Proliferation Of Prostate Carcinoma Cell Line, Asude Aksoy, Safi̇ye Selcen Vi̇cdanli, Ebru Önalan, Ahmet Tektemur, Gökhan Artaş, Asuman Orhan Varoğlu, Mustafa Koç
Turkish Journal of Biology
Stathmin1 (STMN1) has been proposed as a possible prognostic marker and a potential therapeutic target for some cancers. We aimed to analyze the changes in autophagy, invasion, apoptosis-related genes in prostate cancer (PCa) cell line (PC-3), after small interfering RNA (siRNA)-mediated STMN1 silencing, and also the relationships of STMN1 expression, clinicopathological parameters, and survival (OS) in PCa cases. The STMN1 expressions were analyzed, immunohistochemically, in formalin-fixed paraffin-embedded 75 PCa and 15 benign prostatic hypertrophy (BPH) tissues. The correlation between the levels of expression STMN1, clinicopathological features, and OS was determined in PCa cases. The siRNA-mediated STMN1 incubated PC-3 cells were …