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Revision Of The Genus Nepeta L. (Lamiaceae) In Iraq, Tuncay Di̇rmenci̇, Ali̇ Haloob, Ferhat Celep, Shahina A. Ghazanfar Jan 2023

Revision Of The Genus Nepeta L. (Lamiaceae) In Iraq, Tuncay Di̇rmenci̇, Ali̇ Haloob, Ferhat Celep, Shahina A. Ghazanfar

Turkish Journal of Botany

This paper revises the genus Nepeta for the family Lamiaceae for the Flora of Iraq project. We describe a new species, Nepeta iraqensis, and four new records Nepeta congesta subsp. cryptantha, N. stricta, N. lamiifolia and N. iodantha for Iraq. Lectotypes for six taxa are selected and comments on complex species are given. In addition, two new synonyms are given here for the first time. In all, we describe with identification keys, 19 taxa, three of which are endemic to Iraq.


The Effect Of Grafting On Pollen Fertility And Seed Production Of Diploid Interspecific Hybrid And Tetraploid Eggplant Genotypes, Sebahatti̇n Çürük, İlknur Külahlioğlu Çeği̇l Jan 2023

The Effect Of Grafting On Pollen Fertility And Seed Production Of Diploid Interspecific Hybrid And Tetraploid Eggplant Genotypes, Sebahatti̇n Çürük, İlknur Külahlioğlu Çeği̇l

Turkish Journal of Botany

Solanum melongena is susceptible to diverse diseases and parasites, in particular the wilts (bacterial, Fusarium and Verticillium), nematodes, and some insects. Solanum torvum is robust to Verticillium and some bacterial wilts and root-knot nematode. It was reported that interspecific hybrid plants originated out of the hybridization of these species were sterile. In our previous studies that have been carried out to overcome this interspecific hybridization barrier, only from Faselis F1 that was used as the female parent, many interspecific hybrid seeds were obtained and 9.07% of the seeds grew into plants in vitro. The percentage of pollen viability and germination …


Tanacetum Isfahanicum (Compositae-Anthemideae), A New Species From Iran And Its Phylogenetic Position Based On Nrdna Its Data, Maryam Naderifar, Ali Sonboli, Shahrokh Kazempour Osaloo Jan 2023

Tanacetum Isfahanicum (Compositae-Anthemideae), A New Species From Iran And Its Phylogenetic Position Based On Nrdna Its Data, Maryam Naderifar, Ali Sonboli, Shahrokh Kazempour Osaloo

Turkish Journal of Botany

Tanacetum isfahanicum Sonboli and Naderifar (Compositae-Anthemideae) is described as a new species from Isfahan and Fars provinces of Iran. It belongs morphologically to Tanacetum sect Xanthoglossa and differs from its the closest relative, T. polycephalum, by shape of basal and cauline leaves, shape of capitula, length and width of involucre and color of achene ribs. The phylogenetic position of the new species within the genus Tanacetum is established based on nrDNA ITS sequences variation and its close relationship with T. polycephalum is corroborated.


Diversity Of Endolichenic Fungi Within Lichen Genus Parmotrema From India, Jyotsna Chakarwarti, Sanjeeva Nayaka, Suchi Srivastava Jan 2023

Diversity Of Endolichenic Fungi Within Lichen Genus Parmotrema From India, Jyotsna Chakarwarti, Sanjeeva Nayaka, Suchi Srivastava

Turkish Journal of Botany

: The lichens serve as an ecological niche for a group of unexplored fungal species residing inside their thallus without causing any noticeable symptoms and such fungi are termed as endolichenic fungi. The objective of the current study is to check the endolichenic fungal diversity within lichen genus Parmotrema. The study resulted in a total of 450 endolichenic fungi (ELF) isolates from 15 species of Parmotrema. Out of these, 73 sporulating isolates were identified using ITS sequences which resulted in 47 species under 23 genera. The phylogenetic assemblage of the fungi comprised Sordariomycetes (84.50%), Dothideomycetes (5.63%), Eurotiomycetes (7.04%), Pezizomycetes (1.40%), …


Ecological Quality Status Of The Turkish Coastal Waters By Using A Marine Macrophytic Biotic Index (Eei-C), Ergün Taşkin, İbrahi̇m Tan, Murat Çakir, Özge Sungur, Orki̇de Mi̇nareci̇, Ersi̇n Mi̇nareci̇, Hakan Atabay Jan 2023

Ecological Quality Status Of The Turkish Coastal Waters By Using A Marine Macrophytic Biotic Index (Eei-C), Ergün Taşkin, İbrahi̇m Tan, Murat Çakir, Özge Sungur, Orki̇de Mi̇nareci̇, Ersi̇n Mi̇nareci̇, Hakan Atabay

Turkish Journal of Botany

The present study includes the results of the second benthic macrophytes? monitoring period of a survey of ecological status from the Turkish coasts. The biotic index Ecological Evaluation Index (EEI-c) was used to assess the ecological status classes (ESC) and MA-LUSI the anthropogenic pressures. Sampling was made by the quadrat (20 × 20 cm) method, and the samples were collected from 93 sites in Turkish coastal waters between 2017 and 2019. In total, 240 taxa were found in the Turkish marine waters. Forty sites were classified into High ESC, 24 sites into Good, 12 sites into Moderate, 13 sites into …


Sorghum Wrky Transcription Factor Sbwrky45 Enhanced Seed Germination Under Drought Stress In Transgenic Arabidopsis, Elamin Baillo, Muhammad Sajid Hanif, Ping Xu, Zhengbin Zhang Jan 2023

Sorghum Wrky Transcription Factor Sbwrky45 Enhanced Seed Germination Under Drought Stress In Transgenic Arabidopsis, Elamin Baillo, Muhammad Sajid Hanif, Ping Xu, Zhengbin Zhang

Turkish Journal of Botany

The WRKY transcription factors (TFs) family is an important family of plant-specific TFs, playing vital roles in various abiotic and biotic stress responses. WRKY TFs are gaining considerable attention due to their significant roles in stress responses. However, their functions in sorghum (Sorghum bicolor) are lagging behind. In this study, a WRKY gene designated as SbWRKY45 was isolated and characterized from sorghum. SbWRKY45, belonging to Group IIa, consists of one intron and two exons and encodes 430 amino acids. SbWRKY45 is located in chromosome 4. The cis-element prediction analysis showed that the promoter region of SbWRKY45 has several abiotic …


A Comparative Study Of Oocyte Between Native Cattle And Buffalo Species In Bangladesh: A Qualitative And Quantitative Approach, Zannatul Naim, Md Saiful Islam, Lam Yea Asad, Md Enayet Kabir Jan 2023

A Comparative Study Of Oocyte Between Native Cattle And Buffalo Species In Bangladesh: A Qualitative And Quantitative Approach, Zannatul Naim, Md Saiful Islam, Lam Yea Asad, Md Enayet Kabir

Turkish Journal of Veterinary & Animal Sciences

In vitro embryo production (IVP) can help alleviating reproductive difficulties in cattle and buffalo. This study compared qualitative and quantitative features of native cattle and buffalo ovaries and oocytes to understand them comprehensively. In addition, it was conducted to pick the ideal ovaries for oocyte collection and to assess either maturation affects oocyte diameter or not. The ovaries were collected from the local slaughterhouses of Dhaka city, Bangladesh. Next, the quantitative parameters of ovaries were measured, the follicular fluid was aspired, the oocytes were classified, and the diameters of oocytes were determined in both pre and postmaturation. Here, the results …


Monoclonal Antibodies Against Methyl Glucuronoxylan Epitopes For Understanding Xylan Structure And Modification, Utku Avci Jan 2023

Monoclonal Antibodies Against Methyl Glucuronoxylan Epitopes For Understanding Xylan Structure And Modification, Utku Avci

Turkish Journal of Botany

Lignocellulosic biomass is an abundant and renewable source that could be utilized for production of many bioproducts. It mainly consists of cellulose, hemicellulose, and lignin, all of which come together to form a recalcitrant wall that impedes production of bioproducts. In order to overcome the recalcitrant nature of the biomass, it is important to fully understand how cell wall components are synthesized and assembled. Xylan is one of the hemicellulosic components of the wall that contributes to recalcitrance. Xylan has substitutions on the backbone that are formed by the orchestration of many enzymes. For example, glucuronoxylan methyltransferases are responsible for …


Phytochemical Investigation Of Alkaloid Fractions Of Fumaria Vaillantii And F. Asepala And Their Antifungal Influence On Gene Expression Pattern In Aspergillus Species, Monir Mohseni, Azra Ataie Azimi, Babak Delnavaz Hashemloian, Mozhgan Farzamisepehr Jan 2023

Phytochemical Investigation Of Alkaloid Fractions Of Fumaria Vaillantii And F. Asepala And Their Antifungal Influence On Gene Expression Pattern In Aspergillus Species, Monir Mohseni, Azra Ataie Azimi, Babak Delnavaz Hashemloian, Mozhgan Farzamisepehr

Turkish Journal of Botany

The genus Fumaria is known for its strong medicinal effects. This research aimed to assess the phytochemical profile in various alkaloid fractions from Fumaria vaillantii Loisel and Fumaria asepala Boiss. grown in the Saveh region of the central province of Iran and their antifungal activity against Aspergillus flavus and Aspergillus niger was investigated in laboratory conditions. Also, the types and amount of alkaloid compounds and the effect of compounds on the expression of key genes of aflatoxin biosynthesis were conducted in order to investigate the ability of alkaloids of two Fumaria species to prepare environmentally friendly disinfectants. The total alkaloid …


Boron Toxicity Induces Sulfate Transporters At Transcriptional Level In Arabidopsis Thaliana, Ceyhun Kayihan, Emre Aksoy, Su Naz Mutlu Jan 2023

Boron Toxicity Induces Sulfate Transporters At Transcriptional Level In Arabidopsis Thaliana, Ceyhun Kayihan, Emre Aksoy, Su Naz Mutlu

Turkish Journal of Botany

Plants activate glutathione (GSH)-dependent detoxification pathways at biochemical and molecular levels under boron (B) toxicity. Sulfate uptake and transport are necessary for GSH biosynthesis in plants. Therefore, the transcriptional regulation of some sulfate transporters was determined in this study to clarify the importance of these transporters in leaf and root tissues of Arabidopsis thaliana under toxic B conditions. The expression level of SULTR1;3 was dramatically increased in leaf and root tissues under moderate and severe toxic B conditions, suggesting source-to-sink sulfate translocation under B toxicity. Stable expression levels of SULTR2;1, SULTR2;2, and low SULTR3;5 expression might restrict the sulfate movement …


Activated Charcoal Alleviates Fluoride Stress By Restricting Fluoride Uptake And Counteracting Oxidative Damages In The Rice Cultivar Mtu1010, Ankur Singh, Swarnavo Chakraborty, Aryadeep Roychoudhury Jan 2023

Activated Charcoal Alleviates Fluoride Stress By Restricting Fluoride Uptake And Counteracting Oxidative Damages In The Rice Cultivar Mtu1010, Ankur Singh, Swarnavo Chakraborty, Aryadeep Roychoudhury

Turkish Journal of Botany

This work was aimed to explore the efficacy of activated charcoal (5 mg g-1 soil) in abating fluoride (25 mg L-1 NaF) stress in rice seedlings, since the protective role of charcoal is widely reported against other forms of abiotic stress. Application of NaF solution reduced germination rate, dry and fresh weight, and shoot and root length of seedlings. Extensive fluoride accumulation lowered the chlorophyll level along with higher electrolyte leakage and formation of H2 O2 , malondialdehyde, and methylglyoxal. Administration of activated charcoal lowered the extent of oxidative damages by inhibiting the uptake of fluoride ions. Exogenous …


Improvements In The Phylogeny Of Epilobium And Chamaenerion Inferred From Nrdna And Cpdna Data Focusing On Türkiye, Suzan Kundakçi, Serdar Makbul, Mutlu Gültepe, Murat Erdem Güzel, Seda Okur, Kami̇l Coşkunçelebi̇ Jan 2023

Improvements In The Phylogeny Of Epilobium And Chamaenerion Inferred From Nrdna And Cpdna Data Focusing On Türkiye, Suzan Kundakçi, Serdar Makbul, Mutlu Gültepe, Murat Erdem Güzel, Seda Okur, Kami̇l Coşkunçelebi̇

Turkish Journal of Botany

Epilobium and Chamaenerion included 165 and 8 species over the world, respectively. The members of the genera are distributed particularly in moist habitats from subpolar to tropical regions.This paper aims to provide improvements in the phylogeny of the genera Epilobium and Chamaenerion using Internal Transcribed Spacer (ITS) of nuclear DNA and matK gene sequence data evaluation with maximum parsimony, maximum likelihood, and Bayesian inference criterations. A total of 188 individual accessions belonging to 28 taxa were newly generated and 110 sequences imported from GenBank (NCBI) were analysed. The nrDNA and plastid DNA gene trees supported to treat Epilobium and Chamaenerion …


Histochemical And Surface Microstructural Analyses Of Floral Cuticles Provide Evidence For Differential Behaviors In Scent Volatiles Emission In Two Tuberoses (Agave Amica (Medik.) Theide And Govaerts) Cultivars From Asparagaceae, Raktim Bhattacharya, Adinpunya Mitra Jan 2023

Histochemical And Surface Microstructural Analyses Of Floral Cuticles Provide Evidence For Differential Behaviors In Scent Volatiles Emission In Two Tuberoses (Agave Amica (Medik.) Theide And Govaerts) Cultivars From Asparagaceae, Raktim Bhattacharya, Adinpunya Mitra

Turkish Journal of Botany

Two popular cultivars of tuberose (Agave amica (Medik.) Theide and Govaerts syn. Polianthes tuberosa L.) from the family Asparagaceae, widely cultivated for floricultural purposes are ,'Calcutta Single' (CS) and 'Calcutta Double' (CD). It was evidenced that CS flowers emit intense scent volatiles as compared to CD flowers, while CD flowers retained higher contents of internal pool of scent volatiles than CS flowers. Such contrasting observations between the flowers of two cultivars suggest the role of possible barriers such as cuticles that prevent the emission of scent volatiles. The cuticular structure of both cultivars was studied using different histochemical approaches, …


The Assessment Of Genetic Diversity And Population Structure Of Endemic Scutellaria Yildirimlii (Lamiaceae) For Conservation Purposes, Merve Yildirim, Gül Ni̇lhan Tuğ, Ahmet Emre Yaprak Jan 2023

The Assessment Of Genetic Diversity And Population Structure Of Endemic Scutellaria Yildirimlii (Lamiaceae) For Conservation Purposes, Merve Yildirim, Gül Ni̇lhan Tuğ, Ahmet Emre Yaprak

Turkish Journal of Botany

Scutellaria yildirimlii is an endangered perennial endemic species from Turkey and belongs to the family Lamiaceae, which has a high number of medicinal and aromatic plants. It is crucial to determine genetic diversity and population structure of this species for its conservation measures; therefore, 111 individuals from five natural populations of S. yildirimlii were investigated by using 15 inter simple sequence repeats (ISSR) primers. The percentage of polymorphic loci (PPL), Nei?s gene diversity (H), and Shannon?s information index (I) at the species and population-level were determined as 93.9%, 0.183, 0.292 and 56.5%, 0.158, 0.242, respectively. The analysis of molecular variance …


Protective Potential Of Mokko Lactone From Cheilocostus Speciosus (J. Koenig) C.D.Specht (Costaceae) Rhizomes Against Fulminant Hepatic Failure, Ahmed Altyar, Ikhlas Sindi, Dina El-Agamy, Wael Elsaed, Ahmed Shehata, Hossam Abdallah, Gamal Mohamed, Abdelsattar Omar, Sabrin Ibrahim Jan 2023

Protective Potential Of Mokko Lactone From Cheilocostus Speciosus (J. Koenig) C.D.Specht (Costaceae) Rhizomes Against Fulminant Hepatic Failure, Ahmed Altyar, Ikhlas Sindi, Dina El-Agamy, Wael Elsaed, Ahmed Shehata, Hossam Abdallah, Gamal Mohamed, Abdelsattar Omar, Sabrin Ibrahim

Turkish Journal of Botany

Cheilocostus speciosus (Syn: Costus speciosus) (Crepe or spiral ginger) is one of the species of the family Costaceae that is widely used in various traditional medicines for treating various ailments. Mokko lactone (ML) belongs to the guaianolide family of sesquiterpenes, which has been separated from C. speciosus. It showed noticeable antiinflammation and antioxidative capacities. The current study explored the ML hepatoprotective potential against FHF (fulminant hepatic failure) in mice. FHF was successfully established using intraperitoneal injection of ?-galactosamine (?-GalN, 700 mg/kg)/lipopolysaccharide (LPS, 10 µg/kg) in male Swiss-albino mice. The mice were pretreated with ML (20 or 40 mg/kg, orally) daily …


Preliminary Studies On The Effect Of Nanoparticle Seed Treatments On Seed Quality Attributes And Yield In Chickpea, Sushma Mudlupura Kumar, Shiv Yadav, Sangita Yadav, Ravish Choudhary, Sandeep Lal, Chellapilla Bharadwaj, Zakir Hussain, Priya Ranjan Kumar Jan 2023

Preliminary Studies On The Effect Of Nanoparticle Seed Treatments On Seed Quality Attributes And Yield In Chickpea, Sushma Mudlupura Kumar, Shiv Yadav, Sangita Yadav, Ravish Choudhary, Sandeep Lal, Chellapilla Bharadwaj, Zakir Hussain, Priya Ranjan Kumar

Turkish Journal of Agriculture and Forestry

Nanotechnology is a novel and emerging approach that can be utilized in the agriculture sector for biotic and abiotic stress management, disease detection, and nutrient absorption. Various metal oxide nanoparticles such as zinc, titanium, silicon oxides were found to have a positive effect on seed quality attributes in various crops. Therefore, a study was carried out on chickpea (Cicer arietinum L.) with the objective to study the effect of nanoparticles on seed quality attributes including germination, seedling growth, vigour and yield. The seeds were dressed and infused with each of nano and bulk forms of zinc oxide, titanium oxide, …


Experimental Design Of Open-Field Temperature And Precipitation Manipulation System To Simulate Summer Extreme Climate Events For Plants And Soils, Gwang Jung Kim, Heejae Jo, Hyeonji Kim, Min Seok Cho, Nam-Jin Noh, Hanna Chang, Hyung-Sub Kim, Yowhan Son Jan 2023

Experimental Design Of Open-Field Temperature And Precipitation Manipulation System To Simulate Summer Extreme Climate Events For Plants And Soils, Gwang Jung Kim, Heejae Jo, Hyeonji Kim, Min Seok Cho, Nam-Jin Noh, Hanna Chang, Hyung-Sub Kim, Yowhan Son

Turkish Journal of Agriculture and Forestry

Extreme climate events are expected to occur very frequently and intensively with climate change, and such extreme events can induce irreversible damage to plants and soils, as well as ecosystems. Accordingly, there is a need to understand the effects of extreme climate events on ecosystems. Here, we designed a temperature and precipitation manipulation system to simulate extreme climate events of heat, drought, and heavy rainfall. We constructed three soil surface temperature manipulation levels (control, 3 °C, and 6 °C increases) and three precipitation manipulation levels (control, drought, and heavy rainfall) with six replicates, and operated these from day of year …


Phytochemical Potential And Associated Health Benefits Of Cucurbita Flower, Arya Gargi, Jyoti Singh, Prasad Rasane, Sawinder Kaur, Jaspreet Kaur, Chandra Mohan Mehta, Yogesh Gat, Ravish Choudhary Jan 2023

Phytochemical Potential And Associated Health Benefits Of Cucurbita Flower, Arya Gargi, Jyoti Singh, Prasad Rasane, Sawinder Kaur, Jaspreet Kaur, Chandra Mohan Mehta, Yogesh Gat, Ravish Choudhary

Turkish Journal of Agriculture and Forestry

Edible flowers are currently gaining popularity as the majority of the edible flower species have a nutritional profile that meets several dietary demands and the consumption of flowers as part of customary cuisine or alternative alchemy is reported in various cultures around the world. Pumpkin flowers are primarily consumed in some Asian and North American countries like India, China, Bangladesh, and Mexico, respectively. The pumpkin plant has served medicinally worldwide by treating wounds, cardiovascular disease, several types of cancers, gastrointestinal diseases, anemia, urinary tract infections and intestinal parasites, however, its flowers among the same line have also been therapeutically used …


Actinidia Deliciosa: A High-Resolution Mass Spectrometric Approach For The Comprehensive Characterization Of Bioactive Compounds, Mayya Razgonova, Alexsander Boyko, Yulia Zinchenko, Nadezhda Tikhonova, Andrey Sabitov, Alexander Mikhailovich Zakharenko, Kirill Golokhvast Jan 2023

Actinidia Deliciosa: A High-Resolution Mass Spectrometric Approach For The Comprehensive Characterization Of Bioactive Compounds, Mayya Razgonova, Alexsander Boyko, Yulia Zinchenko, Nadezhda Tikhonova, Andrey Sabitov, Alexander Mikhailovich Zakharenko, Kirill Golokhvast

Turkish Journal of Agriculture and Forestry

Actinidia deliciosa (A. Chev.) C.F. Liang & A.R& Ferguson, 1984 contains a large number of target analytes, which are biologically active compounds. HPLC-ion trap-MS/MS (tandem mass spectrometry) was used to identify target analytes in extracts of A. deliciosa (varieties Abbot, Alison, Bruno, Hayward, Monti), originating from the Adler's Branch of N.I. Vavilov All-Russian Institute of Plant Genetic Resources. Separately, the pulp of the kiwi fruit and its peel were analyzed for the composition of biologically active substances. The richest in the composition of active substances was indicators of the cultivar Monti. The results of initial studies revealed the presence of …


Production And Oenological Potential Of Riesling Variety Clones 49, 1091 And 1089, Tatjana Jovanovic-Cvetkovic, Rada Grbic, Borut Bosancic, Miljan Cvetkovic Jan 2023

Production And Oenological Potential Of Riesling Variety Clones 49, 1091 And 1089, Tatjana Jovanovic-Cvetkovic, Rada Grbic, Borut Bosancic, Miljan Cvetkovic

Turkish Journal of Agriculture and Forestry

Clonal selection in viticulture is based on genetic variability with the aim of creating superior plants (clones) that enable more economical production. The Riesling variety, with a long tradition of cultivation, has been the subject of extensive clonal selection and clones 49, 1089 and 1091 were created in France. During the two-year period (2016-2017), the productivity and oenological potential of Riesling clones 49, 1089 and 1091 in the agroclimatic conditions of Bosnia and Herzegovina were conducted. Significant differences between clones were found in the yield per vine (1.34-1.87 kg), ten skins weight (2.17-2.46 g) and mass of ten berries seeds …


Study On The Effect Of Planting Pattern Adjustment On The Growth Of Kiwifruit Inter-Root Microorganisms And Fruit Quality, Haibo Wu, Lianchun Wang, Linan Kang, Chao Liu, Mingwei Li Jan 2023

Study On The Effect Of Planting Pattern Adjustment On The Growth Of Kiwifruit Inter-Root Microorganisms And Fruit Quality, Haibo Wu, Lianchun Wang, Linan Kang, Chao Liu, Mingwei Li

Turkish Journal of Agriculture and Forestry

As the area planted with kiwifruit continues to expand, monoculture continuous cropping is gradually becoming the main mode of its production. However, current kiwifruit soils suffer from nutrient deficiencies and increased toxicity of their own, which are harmful to their yield and quality. The study proposes a kiwifruit-maize intercrop as a starting point for adjusting the cropping pattern. It was then analysed in terms of basic soil physicochemical properties, sucrose enzyme activity, microbial species, and quantity, respectively, and compared with the kiwifruit intercropping method to verify its effect on inter-root microorganisms and fruit quality. The experimental outcomes demonstrated that the …


Seed Morphology Of Some Plantago (Plantaginaceae) Species In Iran And Its Systematic And Phylogenetic Implications, Saeed Mohsenzadeh, Masoud Sheidai, Fahimeh Koohdar Jan 2023

Seed Morphology Of Some Plantago (Plantaginaceae) Species In Iran And Its Systematic And Phylogenetic Implications, Saeed Mohsenzadeh, Masoud Sheidai, Fahimeh Koohdar

Turkish Journal of Botany

Plantago is a cosmopolitan genus with approximately 200 species and various infrageneric classifications have been reported. In this study, the seed morphologies of 19 species of Plantago from Iran were studied and documented in detail using scanning electron microscopy and light microscopy. The studied species were grouped by using statistical analyses such as a minimum spherical cluster method based on Euclidean distance, principal coordinate analysis, and multidimentional scaling. We have described four types based on the seed shape and states of the inner side of the studied seeds: convex- angular type, convex-elliptic type, flat-elliptic type, and concave-elliptic type. In this …


Dynamics Of Co2 Consumption, And Biomass And Lipid Carbon Production During Photobioreactor Cultivation Of The Diatom Cyclotella, Altan Özkan Jan 2023

Dynamics Of Co2 Consumption, And Biomass And Lipid Carbon Production During Photobioreactor Cultivation Of The Diatom Cyclotella, Altan Özkan

Turkish Journal of Botany

Understanding of CO2 delivery and consumption dynamics in algal photobioreactors are critical to unravel microalgae?s full potential for bioproduct generation and carbon capture from flue gas streams. This study aims to expand our current understanding by cultivating the diatom Cyclotella under controlled process conditions of a bubble column photobioreactor and analyzing CO2 consumption dynamics in real time using results from an online CO2 sensor connected to the reactor exhaust. Two sets of experiments were conducted: they served to contrast the influence of silicon and nitrate (Si&N colimitation) and Si limitation, and the light availability, respectively. CO2 consumption …


Hplc-Uv Analysis Of Phenolic Compounds And Biological Activities Of Padina Pavonica And Zanardinia Typus Marine Macroalgae Species, Hati̇ce Banu Keski̇nkaya, Ebru Deveci̇, Bahar Yilmaz Altinok, Numan Emre Gümüş, Emi̇ne Şükran Okudan Aslan, Cengi̇z Akköz, Serdar Karakurt Jan 2023

Hplc-Uv Analysis Of Phenolic Compounds And Biological Activities Of Padina Pavonica And Zanardinia Typus Marine Macroalgae Species, Hati̇ce Banu Keski̇nkaya, Ebru Deveci̇, Bahar Yilmaz Altinok, Numan Emre Gümüş, Emi̇ne Şükran Okudan Aslan, Cengi̇z Akköz, Serdar Karakurt

Turkish Journal of Botany

The marine macroalgae species are recognized as the food of the future with excellent bioactive properties. This study aimed to investigate phenolic compounds; cytotoxic, antibacterial, and antioxidant activities; total phenolic (TPC) and flavonoid (TFC) contents of the methanol, ethanol, and water extracts of Padina pavonica (PP) and Zanardinia typus (ZT). To the best of our knowledge, this is the first report in which ZT was evaluated in terms of phenolic content, antioxidant, antibacterial, and cytotoxic activities. The HPLC analysis allowed the identification of five phenolic compounds containing rutin (0.31 ± 0.04 ? 3.00 ± 0.21 ppm) in all extracts and …


Condition Factor And Length-Weight Relationships Evaluation Of 15 Oxynoemacheilus Species (Cypriniformes: Nemacheilidae) From Iran, Atta Mouludi-Saleh, Soheil Eagderi, Erdoğan Çi̇çek, Edris Ghaderi Jan 2023

Condition Factor And Length-Weight Relationships Evaluation Of 15 Oxynoemacheilus Species (Cypriniformes: Nemacheilidae) From Iran, Atta Mouludi-Saleh, Soheil Eagderi, Erdoğan Çi̇çek, Edris Ghaderi

Turkish Journal of Zoology

This study was conducted to determine the relationship between the length and weight (LWR) of 15 Oxynoemacheilus species i.e. Oxynoemacheilus bergianus, O. brandtii, O. chomanicus, O. euphraticus, O. elsae, O. frenatus, O. karunensis, O. kiabii, O. kurdistanicus, O. longipinnis, O. parvinae, O. persa, O. marunensis, O. zagrosensis, and O. zarzianus from Iranian inland waters. LWRs with high coefficients of determination were calculated for all species. The values of the slope parameter (b) ranged from 2.225 in O. brandtii to 3.575 in O. euphraticus. Fulton's condition factor (K$_{F}$) ranged from 0.673 in O. persa to 1.407 in O. kiabili …


Emerging Applications Of 3d Engineered Constructs From Plant Seed Extracts, Sedat Odabaş, Bora Gari̇pcan, Rihab Ksouri Jan 2023

Emerging Applications Of 3d Engineered Constructs From Plant Seed Extracts, Sedat Odabaş, Bora Gari̇pcan, Rihab Ksouri

Turkish Journal of Biology

Seeds, by-products derived from various plants such as mango, quince, and apples, are considered waste, though they have emerging commercial potential, and have been used in biological, industrial, and physiological research. Seed-derived natural macromolecules- mainly polysaccharides, mucilage, gums, and cellulose-have physicochemical and structural diversification, giving the potential for forming gels, texturing, thickening, and providing interfacial adsorption. Seed-derived natural macromolecules have been widely used during the last few years in cell research and tissue engineering applications. Their widespread approachability and safety, high rate of biodegradability, biocompatibility, supporting cell proliferation, and extracellular matrix synthesis are the main properties making plant seed derivatives …


Linc00460 Mediates Hmga2 Expression Through Binding To Mirna-143-5p Competitively In Gastric Carcinoma, Xuqing Zhu, Yanli Xiang, Feifei Mo, Lingling Jin Jan 2023

Linc00460 Mediates Hmga2 Expression Through Binding To Mirna-143-5p Competitively In Gastric Carcinoma, Xuqing Zhu, Yanli Xiang, Feifei Mo, Lingling Jin

Turkish Journal of Biology

Background: Compelling evidence has manifested a strong association between aberrant expression of long noncoding RNAs (lncRNAs) and gastric carcinoma (GC) development. Nonetheless, biological impacts of differentially expressed lncRNAs (DElncRNAs) on GC are not scrutinized. Methods: Bioinformatics methods were employed for differential expression analysis and target gene prediction. MTT, colony formation, and Transwell methods were implemented for GC cell proliferation, migration, and invasion assessment. Western blot was implemented to test the protein level. The binding of genes was tested with dual-luciferase and RNA binding protein immunoprecipitation (RIP) approaches. Results: Noticeably high level of LINC00460 was observed in GC tissues and cells. …


Boquila: Ngs Read Simulator To Eliminate Read Nucleotide Bias In Sequence Analysis, Ümi̇t Akköse, Ogün Adebali̇ Jan 2023

Boquila: Ngs Read Simulator To Eliminate Read Nucleotide Bias In Sequence Analysis, Ümi̇t Akköse, Ogün Adebali̇

Turkish Journal of Biology

Sequence content is heterogeneous throughout genomes. Therefore, genome-wide next-generation sequencing (NGS) reads biased towards specific nucleotide profiles are affected by the genome-wide heterogeneous nucleotide distribution. Boquila generates sequences that mimic the nucleotide profile of true reads, which can be used to correct the nucleotide-based bias of genome-wide distribution of NGS reads. Boquila can be configured to generate reads from only specified regions of the reference genome. It also allows the use of input DNA sequencing to correct the bias due to the copy number variations in the genome. Boquila uses standard file formats for input and output data, and it …


Development And Validation Of A Scale For Measuring Pet Owners' Loyalty To Their Pet*, Seda Çavuş Alan, Abdullah Özen, Nurhan Hali̇sdemi̇r Jan 2023

Development And Validation Of A Scale For Measuring Pet Owners' Loyalty To Their Pet*, Seda Çavuş Alan, Abdullah Özen, Nurhan Hali̇sdemi̇r

Turkish Journal of Veterinary & Animal Sciences

Loyalty is a person's willingness to devote oneself to a cause and consists of concepts such as fidelity, not giving up, continuity, and stability. For this reason, this relationship stems from loyalty to be able to talk about a strong attachment between humans and animals. This study aimed to develop a measurement tool for the evaluation of the loyalty levels of people toward their pets. The qualitative method for determining the judgments in the scale will be called the pet loyalty scale; the quantitative methods (explanatory factor analysis and confirmatory factor analysis) were used to determine the validity and reliability …


Genotyping Of The Κ - Casein Gene By Pcr - Rflp (Acui Digestion) And Its Relationship To Milk Yield Traits In Anatolian Buffaloes, Murrah Buffaloes, And Their Crosses, Orhan Karadağ, Vasfi̇ye Kader Esen, Mehmet Aki̇f Yüksel, Mustafa Küçükkebabçi, Semi̇h Sevi̇m, İlkay Çeti̇n, Bi̇nnur Kaptan, Mehmet İhsan Soysal Jan 2023

Genotyping Of The Κ - Casein Gene By Pcr - Rflp (Acui Digestion) And Its Relationship To Milk Yield Traits In Anatolian Buffaloes, Murrah Buffaloes, And Their Crosses, Orhan Karadağ, Vasfi̇ye Kader Esen, Mehmet Aki̇f Yüksel, Mustafa Küçükkebabçi, Semi̇h Sevi̇m, İlkay Çeti̇n, Bi̇nnur Kaptan, Mehmet İhsan Soysal

Turkish Journal of Veterinary & Animal Sciences

The aim of this study was to investigate the polymorphism of the κ - casein gene (kappa casein, CSN3) in buffaloes and determine its effects on milk yield traits. Data were obtained from 2016 to 2019 from all animals in the ongoing Anatolian Buffalo Breeding Project. Genomic DNA was collected from a total of 209 buffaloes of different ages and sexes, namely 31 Murrah, 46 Anatolian buffaloes, and 132 of their crosses (Murrah × Anatolian). Genotyping of CSN3 gene by polymerase chain reaction-restriction fragment length polymorphism (PCR - RFLP) technique with restriction enzyme (AcuI) revealed three …