Life Sciences Commons^™

Modeling Oyster Populations Ii. Adult Size And Reproductive Effort, E. E. Hofmann, J. M. Klinck, E. N. Powell, S. Boyles, M. Ellis

CCPO Publications

A time-dependent model of energy flow in post-settlement oyster populations is used to examine the factors that influence adult size and reproductive effort in a particular habitat, Galveston Bay, Texas, and in habitats that extend from Laguna Madre, Texas to Chesapeake Bay. The simulated populations show that adult size and reproductive effort are determined by the allocation of net production to somatic or reproductive tissue development and the rate of food acquisition, both of which are temperature dependent. For similar food conditions, increased temperature reduces the allocation of net production to somatic tissue and increases the rate of food acquisition. …

Modeling Oyster Populations. Iv. Rates Of Mortality, Population Crashes, And Management, E. N. Powell, J. M. Klinck, E. E. Hofmann, S. M. Ray

CCPO Publications

A time-dependent energy-flow model was used to examine how mortality affects oyster populations over the latitudinal gradient from Galveston Bay, Texas, to Chesapeake Bay, Virginia. Simulations using different mortality rates showed that mortality is required for market-site oysters to be a component of the population's size-frequency distribution; otherwise a population of stunted individuals results. As mortality extends into the juvenile sizes, the population's size frequency shifts toward the larger sizes. In many cases adults increase despite a decrease in overall population abundance. Simulations, in which the timing of mortality varied, showed that oyster populations are more susceptible to population declines …

Population-Dynamics Of Juvenile Caribbean Spiny Lobster, Panulirus-Argus, In Florida Bay, Florida, David Forcucci, Mark J. Butler Iv, John H. Hunt

Biological Sciences Faculty Publications

Despite a wealth of information on the growth and population dynamics of sub-adult and adult Caribbean spiny lobsters (Panulirus argus), there is far less information about younger juveniles under natural conditions. Here we describe growth and population dynamics of juvenile spiny lobsters (12-68 mm carapace length, CL) that we have studied for 14 months (October 1988-December 1989) using mark-recapture techniques in a hardbottom community in Florida Bay, Florida. We also monitored the supply of postlarvae into the region in 1988 and 1989 using Witham-type surface collectors in an effort to link peak periods of settlement of postlarvae with subsequent cohorts …

Chesapeake Bay Phytoplankton: I. Composition, Harold G. Marshall

Biological Sciences Faculty Publications

A list of 708 Phytoplankton taxa from 10 algal divisions has been compiled for the Chesapeake Bay and is based on the analysis of 2384 water samples over three decades of study.

Contribution Of Zooplankton Lipids To The Flux Of Organic Matter In The Northern Adriatic Sea, Mirjana Najdek, Staša Puškarić, Alexander B. Bochdansky

OES Faculty Publications

Analyses of particulate material collected by sediment traps moored at a location in the northern Adriatic Sea in 1991 revealed the presence of zooplankton fatty acids, even though zooplankton and other 'swimmers' killed by the trap's preservative were carefully removed. Laboratory experiments were conducted to (1) prove the existence of zooplankton lipids within fecal pellets, (2) exclude the possibility of incomplete separation of swimmers and other material as eventual contamination with polyunsaturated fatty acids in fecal pellets, (3) evaluate the importance of zooplankton lipids to mass flux and (4) reveal the mechanisms which lead to excretion of undigested organic matter, …

A Comparison Of A Validated Otolith Method To Age Weakfish, Cynoscion Regalis, With The Traditional Scale Method, Susan K. Lowerre-Barbieri, Mark E. Chittenden Jr., Cynthia M. Jones

OES Faculty Publications

Otoliths, scales, dorsal spines, and pectoral-fin rays were compared to ascertain the best hardpart for determining the age of weakfish, Cynoscion regalis. Each showed concentric marks, which could be interpreted as annuli. Sectioned otoliths, however, consistently showed the clearest marks, had 100% agreement between and within readers, and were validated by the marginal increment method for ages 1-5. This validated method of ageing weakfish was then compared with the traditionally used scale method. The scale method was less precise, as demonstrated by lower percent agreement, and generally assigned younger ages for fish older than age 6 (as determined by …

Biogeochemical Control Of Phosphorus Cycling And Primary Production In Lake Michigan, R. S. Walsh, Gregory A. Cutter, W. M. Dunstan, J. Radford-Knoery, J. T. Elder

OES Faculty Publications

A 3-yr study in Lake Michigan has shown a 27 mmol P m^-2 increase in the mass of total P (TP) in the water during spring when the lake is mixed from surface to sediment. This value is an order of magnitude greater than the annual P input from external sources. TP changed in concert with increases in chlorophyll a and organic N and decreases in nitrate and soluble Si. The concentration of soluble reactive PO_4^-3 (SRP) remained relatively constant throughout the study. We hypothesize that the SRP concentration is maintained by a chemical equilibrium with calcium-phosphate …

Modeling Daily Production Of Aquatic Macrophytes From Irradiance Measurements: A Comparative Analysis, Richard C. Zimmerman, Alejandro C. Pasini, Randall S. Alberte

OES Faculty Publications

The importance of submerged aquatic macrophytes to coastal ecosystems has generated a need for knowledge of minimum light levels that will support the maintenance and restoration of healthy populations. Our goals were (1) to evaluate the sensitivity to natural, non-sinusoidal fluctuations in irradiance I of analytical integration techniques for calculating daily carbon gain, (2) to evaluate the H_sat (the daily period of I-saturated photosynthesis) model of daily production relative to models based on instantaneous photosynthesis vs irradiance (P vs I) and (3) to provide some guidance for the temporal density of irradiance data required for accurate estimation of …

Assessment Of Genetic Diversity Of Seagrass Populations Using Dna Fingerprinting: Implications For Population Stability And Management, Randall S. Alberte, Gregory K. Suba, Gabriele Procaccini, Richard C. Zimmerman, Steven R. Fain

OES Faculty Publications

Populations of the temperate seagrass, Zostera marina L. (eelgrass), often exist as discontinuous beds in estuaries, harbors, and bays where they can reproduce sexually or vegetatively through clonal propagation. We examined the genetic structure of three geographically and morphologically distinct populations from central California (Elkhorn Slough, Tomales Bay, and Del Monte Beach), using multilocus restriction fragment length polymorphisms (DNA fingerprints). Within-population genetic similarity (S_w) values for the three eelgrass populations ranged from 0.44 to 0.68. The Tomales Bay population located in an undisturbed, littoral site possessed a within-population genetic similarity (S_w = 0.44) that was significantly lower …

The Role Of Nitrogen Availability, Hydroperiod And Litter Quality In Root Decomposition Along A Barrier Island Chronosequence, Christine Elizabeth Conn

Biological Sciences Theses & Dissertations

The decomposition of organic matter regulates carbon and nutrient flux between biotic and abiotic pools. Traditional research emphasizes above ground decomposition processes and, by inference, extends these findings to below ground systems. The study, conducted along a southeastern Atlantic Coast barrier island dune and swale chronosequence (Virginia Coast Reserve Long Term Ecological Research site), addressed how hydroperiod, litter quality and nitrogen availability influenced below ground root decay in response to gradients associated with site age and topographic position and in the context of a nitrogen limited ecosystem. Effects on rates of mass loss and nitrogen and phosphorus dynamics during decomposition …

An Analysis Of Mitochondrial Dna In Rett Syndrome And Other Neurodegenerative Disorders, Catherine Erickson Burgess

Theses and Dissertations in Biomedical Sciences

Mitochondrial dysfunction resulting from mutations on mitochondrial DNA (mtDNA) is being recognized in a growing spectrum of diseases. These diseases, resulting from single base mutations, large deletions, or insertions, have been largely neuromuscular in origin. However, as an understanding of the effects of mtDNA mutations progresses, attention is now focusing on neurodegenerative diseases. Rett Syndrome (RS), a progressive neurodegenerative disease with predominantly female cases, demonstrates morphologic mitochondrial changes, mitochondrial enzyme deficiencies and maternal inheritance (characteristic of mtDNA diseases). No investigation of mtDNA involvement has been previously conducted and, to date, no biological marker exists for this disorder.

Our preliminary studies …

Subunit Interactions Of Recombinant Hiv-1 Reverse Transcriptase With Mutations At L289, Jacquelyn R. Smith

Theses and Dissertations in Biomedical Sciences

Reverse transcriptase (RT) is a dimeric enzyme required for replication of the human immunodeficiency virus (HIV). If the subunits of the RT dimer are dissociated, the enzyme is no longer active; therefore, identification of subunit binding sites could lead to potential targets for antiviral therapy. In order to identify where subunit binding of RT occurs, mutations were made at leucine (L) 289, a residue believed to be involved in dimerization through hydrophobic interactions with other leucines. L289 is the central leucine of a leucine repeat sequence which resembles a leucine zipper protein-DNA binding motif. Two mutations, leucine to arginine (L289R) …

Validation Of A Bag Sampling Method For 1,3-Butadiene, Lori Eckenrode

Community & Environmental Health Theses & Dissertations

At this time there is no NIOSH approved means for bag sampling 1,3-butadiene. An attempt was made to use the application of cold (0°F) to inhibit the reactivity of the gas prior to analysis. The State of California Air Resources Board has an approved method for the gas chromatographic analysis of 1,3-butadiene from stationary sources. The method was utilized in the application of industrial hygiene monitoring of affected workers. The application of cold was found to be ineffective at inhibiting the highly reactive nature of 1,3-butadiene. Analyte losses were too great to classify the method as an accurate measure of …

A Comparison Of No And N20 Production By The Autophic Nitrifier Nitrosomonas Europaea And The Heterotrophic Nitrifier Alcaligenes Faecalis, Iris C. Anderson, Mark Poth, Julie Homstead, David J. Burdige

OES Faculty Publications

Soil microorganisms are important sources of the nitrogen trace gases NO and N₂O for the atmosphere. Present evidence suggests that autotrophic nitrifiers such as Nitrosomonas europaea are the primary producers of NO and N₂O in aerobic soils, whereas denitrifiers such as Pseudomonas spp. or Alcaligenes spp. are responsible for most of the NO and N₂O emissions from anaerobic soils. It has been shown that Alcaligenes faecalis, a bacterium common in both soil and water, is capable of concomitant heterotrophic nitrification and denitrification. This study was undertaken to determine whether heterotrophic nitrification might be …

Description, Distribution, And Abundance Of The Blue Crab, Callinectes Sapidus (Rathbun), Spawning Stock Of The Lower Chesapeake Bay, Patrick John Geer

OES Theses and Dissertations

The lower Chesapeake Bay spawning stock of the blue crab, Callinectes sapidus, (Rathbun), is examined for seven years (1986 - 1992) in an attempt to better understand stock behavior. Three methods of post-stratification are used to describe the distribution and movement of the population over time. The three methods, density strata, geographic zones, and depth strata, did well in explaining movements of the population, indicating a trend of increased concentration of blue crabs near the eastern Bay late in the spawning season - October. The data suggest a bimodal period of spawning and a trimodal period of abundance. The …

Age, Growth, And Mortality Of Atlantic Croaker, Micropogonias Undulatus, In The Chesapeake Bay Region, With A Discussion Of Apparent Geographic Changes In Population Dynamics, Luiz R. Barbieri, Mark E. Chittenden Jr., Cynthia M. Jones

OES Faculty Publications

Atlantic croaker, Micropogonias undulatus, collected from commercial catches in Chesapeake Bay and in Virginia and North Carolina coastal waters during 1988-1991 (n=1,967) were aged from transverse otolith sections. Ages 1-8 were recorded, but eight-year-old fish were rare. Marginal increment analysis showed that for ages 1-7, annuli are formed once a year during the period April-May. Otolith age readings were precise: >99% agreement within and between readers. Observed lengths-at-age were highly variable and growth rate decreased after the first year. Despite the high variability in sizes-at-age, observed lengths for ages 1-7 fit the von Bertalanffy growth model (r2=0.99; n=753) well. …

Pheromonal Composition Of Two Species Of African Amblyomma Ticks: Similarities, Differences And Possible Species Specific Components, Thomas Lem Price Jr.

Biological Sciences Theses & Dissertations

Two species of bont ticks, Amblyomma hebraeum and Amblyomma variegatum, common to Africa have been studied to compare types and quantities of compounds known or believed to serve as components of the attraction-aggregation-attachment pheromone (AAAP). A complex of attraction, aggregation and attachment pheromones are used by these ticks to detect hosts, mates and perhaps minimize interspecific breeding. Solvent extraction of pheromone emitting ticks followed by Gas Chromatography and Mass Spectrometry revealed little difference in the composition of the AAAP in these two species. However, subtle differences in the relative makeup of the pheromonal blend are noted, suggesting that such differences …

Evaluation Of The Gross Anatomy Seasonal Changes Function And Histology Of The Perineal Gland In The Hispid Cotton Rat, Sigmodon Hispidus, Julie Anne Winchell

Biological Sciences Theses & Dissertations

The perinea! gland in the hispid cotton rat, Sigmodon hispidus, is a seasonally cyclic, subcutaneously located organ which is associated with the reproductive system. On gross dissection, the gland possesses a strong attachment to the penis with only loose fascia! connections to the rectum and surrounding muscle and skin. Histologic exam confirms this connection to the reproductive tract and shows the organ to be a compound tubuloacinar gland with a projection leading into the penis. The cyclic hypertrophy and regression of the gland closely parallels that of the testes and seminal vesicles indicating that this cyclicity may be under …

The Effect Of 6-Methoxybenzoxazolinone On Reproductive Condition In The Hispid Cotton Rat, Sigmodon Hispidus, Vera Lee Adams

Biological Sciences Theses & Dissertations

A non-estrogenic hormone, 6-methoxybenzoxazolinone (6-MBOA), found in young growing grasses, has been shown to be a reproductive initiator in several herbivorous rodents. However, the mechanism by which 6-MBOA initiates reproduction has not been determined. Many believe that 6-MBOA represents a reliable cue that the vegetative growing season has begun, but it is unknown whether this hormone is a primary cueing mechanism or if it works in conjunction with other environmental factors. Therefore, a controlled laboratory experiment was conducted using male and female Sigmodon hispidus, the hispid cotton rat, to determine whether different dosages of 6-MBOA (4μg, 40 …

Phytoplankton Assemblages Associated With A Bloom Of Ptychodiscus Brevis Off The North Carolina Coast, Traycie Lea West

Biological Sciences Theses & Dissertations

A bloom of the dinoflagellate Ptychodiscus brevis occurred off the North Carolina coast in late 1987, and samples were forwarded by NOAA to the Old Dominion University Phytoplankton Laboratory for total phytoplankton analysis. Six sampling stations were chosen to represent different bloom scenarios and these six were clustered into three site groups based on the concentrations of statistically significant taxa. Abundances of phytoplankton taxonomic groups over time were examined in relation to P. brevis concentrations to identify any general tendencies. These results indicated the total phytoplankton concentration, and most taxonomic groups, increased at all three site groups regardless of the …

Studies On Type I And Type Ii Dna Topoisomerases From Mammalian Mitochondria, Jia-Hwei Lin

Theses and Dissertations in Biomedical Sciences

Mammalian mitochondria contain a unique DNA topoisomerase I with characteristics of both nuclear and bacterial type I DNA topoisomerases. This enzyme, purified from bovine liver, requires cations as cofactors and possesses optimal activity at pH 7.0, 37°C and either 150 mM K+ or Na+ ions. Similar to nuclear enzymes and different from the bacterial enzyme, divalent ions such as Ca²⁺ or Mg²⁺ will stimulate but are not essential for the enzymatic activity.

Like the nuclear DNA topoisomerase I, the mitochondrial enzyme is capable of relaxing both negatively and positively supercoiled DNA. The relaxation of negatively supercoiled DNA is …

Age And Growth Of Larval And Juvenile Atlantic Croaker, Micropogonias Undulatus, From The Middle Atlantic Bight And Estuarine Waters Of Virginia, Stephen W. Nixon

Biological Sciences Theses & Dissertations

Sagittal otoliths were used to determine the age and growth of 605 larval and juvenile Atlantic croaker, Micropogonias undulatus, collected in the Middle Atlantic Bight (MAB) and estuarine waters of Virginia. A Laird-Gompertz model (r2 = 0.95) was used to describe the growth of croaker up to 65 mm standard length (SL) and 142 days (t): S1_(t) = 2.657 Exp {4.656 [1-Exp (-0.008lt)]}; SL_(t) = standard length at day t. Generally, croaker collected inshore were larger and older than those collected offshore, indicating estuarine immigration from offshore spawning grounds. Back-calculated hatch-dates indicated spawning over an 8- month period …

The Influence Of Temperature Salinity And Postlarval Transport On The Distribution Of Juvenile Spiny Lobsters, Panulirus Argus, In Florida Bay, Jennifer Marie Field

Biological Sciences Theses & Dissertations

Florida Bay is a major nursery for the Caribbean spiny lobster, Panulirus argus. The Bay contains a series of hardbottom or seagrass-covered basins separated by mudbanks, which serve as barriers to water circulation and presumably to transport of postlarvae. Temperatures can fluctuate dramatically in the basins and salinities range from 35 ppt to > 50 ppt. In this study I: i) investigated the physiological tolerance of spiny lobster postlarvae to combinations of temperature and salinity representative of conditions in Florida Bay, and ii) examined how postlarval availability and habitat structure influence spiny lobster recruitment into basins. I measured juvenile lobster …

A Comparison Of Three Cam Profiles As Measured By Emg And Angular Displacement, Elizabeth Grace Ann Hood

Human Movement Studies & Special Education Theses & Dissertations

The purpose of this study was to determine if variations in cam profiles cause differences in muscle contraction as measured by surface EMG, knee joint angular displacement, and torque. There were seven hypotheses tested. The ten subjects were adult male volunteers (18-24 years) who participated in a counterbalanced treatment design study testing three variously shaped cams over five lifting tests. The results indicated that for the EMG data, the cam and lifts effect had significant Wilk's values. For the cam effect the consistent cam had the highest millivolt value. For the lift effect, the pre 1 rep max had the …

The Isolation And Identification Of Polyphenolics From Grape Seeds And Their Activity Towards Specific Cell Lines, Joseph A. Reddy

Chemistry & Biochemistry Theses & Dissertations

Grape seed extract is being marketed in France for cardiovascular use and skin care. The active constituents of both these drugs are certain polyphenols called procyanidins. A similar seed extract has now been obtained from Virginia Chardonnay grape seeds. Ten of the major components in this extract have been isolated in their pure form by the semi-preparative HPLC separation on a YMC ODS-AQ (Octadecylsilane-AQ) column. The ODS-Aq column has been shown to have a better resolving capacity compared to the Spherisorb ODS (Octadecylsilane) column previously described in the literature. This has been attributed to the ODSAQ support which has both …

Analysis Of The Proteoglycan Content In Fresh And Cryopreserved Porcine Cardiovascular Tissues, Yun Hee Shon

Theses and Dissertations in Biomedical Sciences

The purpose of this research was to study the effects of cryopreservation on the proteoglycan (PG) and mineral content of aorta conduit tissue. Proteoglycans from fresh and cryopreserved porcine aorta conduit tissues were isolated by extraction with 4 M guanidine (Gdn) - hydrochloride (HCl) for 48 hours. Quantitative analysis of extracted proteoglycans revealed that the content of proteoglycan material from cryopreserved tissue, measured as uronate and protein per unit weight of wet tissue, was similar to that from fresh tissue. Gel permeation column chromatography studies suggested that proteoglycans present in three CsCl fractions from cryopreserved tissues had molecular weights similar …

Longitudinal Study Of Plasma And Erythrocyte Selenium Levels In Type I Diabetic Children During Development And Treatment Of Ketoacidosis, Pi-Hsia Fan

Chemistry & Biochemistry Theses & Dissertations

Most studies on the biological activity of selenium have focused on its role at the active site in the ubiquitous enzyme, glutathione peroxidase (GSH-Px) which catalyzes the removal of hydrogen peroxide and organic hydroperoxides (1). A connection between selenium deficiency and a wide range of diseases in animals and humans has been reviewed (2). Development of various forms of human cancer (3), failure of the immune system (4), as well as some cardiovascular diseases (5) have been reported or suspected to correlate with selenium deficiency. However, the physiological function of selenium in these different diseases is not fully understood, and …

Evaluation Of Long Term Changes In The Macrobenthic Community Of The Southern Branch Of The Elizabeth River, Virginia, William S. Hunley

Biological Sciences Theses & Dissertations

Long-term changes in the macrobenthos of the Southern Branch of the Elizabeth River, Virginia were investigated by comparing the present study of community structure with that described ten years earlier by Hawthorne (1980). The results indicated that dominant organisms remained relatively constant in composition but exhibited considerable fluctuation in density. Differences in diversity and spatial distribution of fauna were also observed relative to the previous decade.

Multivariate statistical analyses indicated the macrobenthos exhibited significant spatial and seasonal patterns. Sediments characterized as silts and clays predominated down river while sandier sediment types were most common farther upriver. The spatial distributions of …

Separation And Quantification Of Queuine-Modified And Unmodified Transfer Rna Isoacceptors, Jorge Miguel Pereira De Oliveira Da Silva Santos

Chemistry & Biochemistry Theses & Dissertations

The discovery of a base-exchange modification in the first position of the anticodon of four transfer RNA (tRNA) isoacceptor families has been shown to be correlated with a decrease in the rate of cell division in several tumorigenic tissues. This fact led to the hypothesis that wobbling in the anticodon might be a control point wich mediates the rate of translation. A suitable method for separation of different tRNA isoacceptor families had to be created in order to generate a means for quantitatively measuring degrees of this base modification in tRNA. Radio labelled amino acids were used to charge tRNA …

Modeling Nutrient And Plankton Processes In The California Coastal Transition Zone, John Roland Moisan

OES Theses and Dissertations

Two time- and space-dependent, physical-bio-optical models have been developed for the California Coastal Transition Zone (CTZ) region with the overall objective of understanding and quantifying the processes th at contribute to the spatial and temporal development of nutrient and plankton distributions in the CTZ. The first of these models considers only time- and vertical processes at specific locations in the CTZ. The model food web components include: silicate, nitrate, ammonium, two phytoplankton size fractions, copepods, doliolids, euphausiids and a detritus pool. The wavelength dependent attenuation of the subsurface irradiance field, due to sea water, phytoplankton pigment concentrations and dissolved organic …