Life Sciences Commons^™

Using Movement To Infer Critical Life History Events In Mule Deer: Parturition And Natal Dispersal, Tabitha A. Hughes

Theses and Dissertations

The advent of GPS tracking technology has revolutionized the field of wildlife research. The ability to obtain fine-scale location data from collared animals allows for increased understanding of life-history events that have previously been difficult to research. An excellent candidate species for telemetry-based research is mule deer (Odocoileus hemionus). Mule deer are an important species economically due to their position as a harvested species. Additionally, they play an important role in the ecosystems they occupy; therefore information regarding important life history events would improve conservation and management efforts for this species. Our objectives were to use GPS tracking technology to …

Localized Heat Therapy Improves Mitochondrial Function In Human Skeletal Muscle, Erik D. Marchant

Theses and Dissertations

Physical activity results in various types of stress in skeletal muscle including energetic, oxidative, and heat stress. Acute exposure to stress impairs skeletal muscle mitochondrial function. In contrast, chronic intermittent exposure to mild stress through exercise training results in increased mitochondrial content and respiratory capacity. While oxidative and energetic stress have received much attention regarding their long-term effect on skeletal muscle mitochondria, heat stress is not well understood. The purpose of this work was to investigate the effects of localized heat therapy on human skeletal muscle mitochondria, and to compare these effects to those of high-intensity interval exercise training. To …

Monitoring Of Foraging Sites For Ungulates Within Alpine Plant Communities And Establishment Of Long-Term Monitoring Plots For Rare Castilleja Parvula Var. Parvula In The Tushar Mountains, Utah, Heather Shipp

Theses and Dissertations

The Tushar Mountains of Utah provide essential alpine habitat to a variety of flora and fauna, including 27 endemic plant species and several ungulates (mountain goats, deer, elk, cattle). These ungulates were observed throughout two growing seasons and field analyses were conducted to assess foraging selection. Overall, most ungulates, especially large nursery herds, tended to prefer foraging amongst alpine regions within the Bullion volcanic of the Tushars, which is characterized by denser vegetation than the Belknap volcanic region. Mountain goats and deer were most frequently observed foraging within the Tushar alpine habitat; however, elk and domestic cattle were also observed. …

Implementation Of A Genome-Wide Survey Of Induced Mutations To Identify Agronomically Valuable Variants In Chenopodium Quinoa, Andrew Alarcon Parker

Theses and Dissertations

Quinoa has been utilized for millennia in the Andes region of South America as a nutritious and hardy food crop. In recent years interest in quinoa has grown as need increases for an alternative to traditional cereal crops that can tolerate marginal environments while offering superior nutrition. Growers outside the Andes have experienced several complications adopting quinoa, including undesirable secondary metabolites, poor yield, lodging, and height inconsistency. Unfortunately, access to native ecotypes for crop improvement is limited, and desirable traits are difficult to introduce into available quinoa cultivars because of its allotetraploid genome and tendency to self-pollinate. A genome-wide survey …

Aiding Semantic Memory Creation With Navigational Context, Thomas Benjamin Lyle Wasden

Theses and Dissertations

While we have traditionally understood the hippocampus to be involved in memory and navigation, it also appears that it has a role in language processing, creation and prediction. An obvious explanation for this is that language is impossible if linguistic signs cannot be remembered and retrieved. Because linguistic signs are definitionally biologically neutral or arbitrary, we must use the brain's apparatus for learning and storing information from the external world to store and retrieve them. Although plausible, this explanation fails to take into account the hippocampus' role in navigation as a contributing element in the processing, storage and retrieval of …

Families In The Sky: Investigating The Population Structure Of Pinus Longaeva, Samuel Arnold Decker

Theses and Dissertations

In the Western United States, the Great Basin is a geographic feature that is home to a variety of unique species, including Great Basin bristlecone pine (Pinus longaeva, PILO). P. longaeva is well known for the age of some of the trees, some of which are over 4000 years old. In this study 17 microsatellite markers (simple sequence repeat, SSR) are identified and used to genotype a selection of 480 individuals spread across 24 PILO populations and 60 individuals divided equally between 2 outgroup species, Pinus aristata and Pinus flexilis. One population of PILO, HMW, shows more genetic similarity with …

Comparative Sequence Analysis Elucidates The Evolutionary Patterns Of Yersinia Pestis In New Mexico Over Thirty-Two Years, M. Elizabeth Warren

Theses and Dissertations

Yersinia pestis, a gram-negative bacterium, is the causative agent of plague. Y. pestis is a zoonotic pathogen that occasionally infects humans, and is endemic in the western United States. History gives evidence of three main plague pandemics. The first, originating in Egypt in 541AD, is known as the Justinian plague. The second, perhaps most well-known, is thought to have emerged in 1347AD in China, and is called the Black Death. The third, and current plague pandemic, also emerged in China in 1855. In 1899, Y. pestis was established in California, and the plague in other parts of America evolved from …

The Influence Of Thc, Opioids, And Age On The Plasticity Of Excitatory Inputs To Ventral Tegmental Area Gaba Neurons, Isaac Brent Ostlund

Theses and Dissertations

Adults exhibit significant differences in drug vulnerability, learning ability, and emotive processing than adolescents. Long-lasting synaptic changes, including long-term depression (LTD), can endure many hours and are believed to be key to encoding memories and persistent cognitive changes such as addiction. The ventral tegmental area (VTA) is the primary source of midbrain dopamine (DA) and is regulated by local inhibitory GABA neurons. GABA regulation can decrease, resulting in dis-inhibition of DA neurons and increased feelings of reward, learning, or salience attachment to memories. Endocannabinoids (eCBs) are signaling molecules that often result in synaptic plasticity changes, and the eCB system has …

Local Adaptation Of Blue Penstemon: Molecular And Morphological Characterizations Of A Potential Restoration Species For The Northern Basin And Range And Snake River Plain, Jason Mark Stettler

Theses and Dissertations

Penstemon is one of North America's largest endemic genera with over 280 described species. These species are distributed throughout most of North America from the Arctic northern latitudes to tropics of Central America. The genus has historically been divided into six subgenera, but has recently been reorganized into two subgenera following some recent phylogenetic studies. I made a comprehensive assessment of the Penstemon genus' geographic distribution utilizing herbaria databases by ecoregion to discuss the general ecologic adaptations of each historic subgenera. I also assessed the Penstemon genus' bee pollinator diversity utilizing online databases of bee specimen collections associated with Penstemon …

Datadescription-Detection Of Sulfur Dioxide By Broadband Cavity-Enhanced Absorption Spectroscopy (Bbceas), Ryan Thalman, Nitish Bhardwaj, Callum Flowerday, Jaron C. Hansen

ScholarsArchive Data

Files archived include the following:

Figure1.txt This file contains all the data used to make Figure 1 in the paper.

Figure4.txt This file contains all the data used to make Figure 4 in the paper.

Figure5.txt This file contains all the data used to make Figure 5 in the paper.

Figure6.txt This file contains all the data used to make Figure 6 in the paper.

Figure7.txt This file contains the code, written in Igor, that was used to generate this figure.

Figure8.txt This file contains all the data used to make Figure 8 in the paper.

Figure9.txt This file contains …

A Descriptive Analysis Of Severe Maternal Morbidities In Southern Arizona, Joseph Sherman

Undergraduate Honors Theses

Introduction

Maternal morbidities and maternal deaths are rising at an alarming rate throughout the United States, despite advances in medicine and technology (Centers for Disease Control and Prevention [CDC], 2020). In 2020, maternal deaths climbed to its highest peak in thirty years, at 23.8 deaths per 100,000 births (CDC 2020; CDC 2022b). Maternal morbidities have also increased by nearly 200% from 1993 to 2014 (CDC, 2021). The startling rise in both maternal morbidities and maternal deaths is likely exacerbated by limited access to healthcare and the pervasiveness of chronic diseases such as obesity, diabetes, and heart disease (Carroll, 2017; Geller …

Osteoarthritis And Cartilage Insult: Elucidation Of Molecular Interplay And Attempted Interventions, Brandon James Rose

Theses and Dissertations

Osteoarthritis (OA) is a common and incapacitating joint disease beginning with breakdown of articular cartilage and extending into subchondral bone. At present, the processes through which the disease occurs are poorly understood, and interventions are limited to pain relief and eventual joint replacement. OA is commonly associated with obesity and corresponding pathologies, and as OA is demonstrably not a product of passive erosion of cartilage over time or under increased loads there must needs be some other mechanistic link between the two conditions. We hypothesize that the production of ceramides, a hallmark of the insulin resistance syndrome underlying many obesity-related …

The Use Of Nucleotide Salvage Pathway Enzymes As Suitable Tumor Targets For Antibody-Based And Adoptive Cell Therapies, Edwin J. Velazquez

Theses and Dissertations

Despite the progress made in cancer research, cancer remains one of the leading causes of death worldwide. Although the development of new cancer treatments has improved cancer patients' survival rate, a significant number of patients experience refractory and recurrence events with serious side effects. It is known that the immune system actively participates in eliminating cancer. However, cancer cells can develop mechanisms to evade the immune system resulting in immunotolerance. Immunotherapy aids the patient's immune system's ability to recognize and eliminate cancer cells. During the last three decades, immunotherapy has gradually emerged as an effective and more specific approach to …

The Inhibition Of Valproic Acid-Induced Negative Neurodevelopmental Outcomes Through Nrf2-Mediated Redox Regulation, Ted Brenton Piorczynski

Theses and Dissertations

Valproic acid (VPA) is a commonly prescribed antiepileptic drug that causes negative neurodevelopmental outcomes, including neural tube defects (NTDs) and neurodevelopmental disorders, in fetuses exposed to it. While the exact mechanism by which VPA causes defects is unknown, research has shown that VPA increases the production of reactive oxygen species (ROS) that lead to redox dysregulation. We hypothesize that VPA causes negative neurodevelopmental outcomes through the disruption of redox-sensitive signaling pathways that are critical for proper embryonic development, and that protection from the VPA-induced redox disruption may decrease the prevalence of the observed defects. Time-bred mice were treated with 3H-1,2-dithiole-3-thione …

Improving Capture Methods For Neonate Ungulates, Matthew T. Turnley

Theses and Dissertations

The capture of neonate ungulates has played an integral role in studies of habitat selection, phenology, survival, and other topics of ecological interest. However, neonates can be difficult for researchers to locate and capture. Neonate ungulates are born in habitats with reduced visibility, frequently spend time in a concealed, prone position, and may display cryptic coloration. In an attempt to improve researchers' likelihood of locating and capturing neonate ungulates, multiple capture methods have been developed. Much remains unknown about biases associated with capture methods and how to further improve capture methods once biases are understood. Our objectives were to determine …

The Ability To Classify Patients Based On Gene-Expression Data Varies By Algorithm And Performance Metric, Stephen Piccolo, Avery Mecham, Nathan P. Golightly, Jérémie L. Johnson, Dustin B. Miller

Faculty Publications

By classifying patients into subgroups, clinicians can provide more effective care than using a uniform approach for all patients. Such subgroups might include patients with a particular disease subtype, patients with a good (or poor) prognosis, or patients most (or least) likely to respond to a particular therapy. Transcriptomic measurements reflect the downstream effects of genomic and epigenomic variations. However, high-throughput technologies generate thousands of measurements per patient, and complex dependencies exist among genes, so it may be infeasible to classify patients using traditional statistical models. Machine-learning classification algorithms can help with this problem. However, hundreds of classification algorithms exist—and …

The Effects Of Curricular Change On Student Learning And Well-Being In Biomedical And Clinical Education, Rachel Jalaire Tomco Novak

Theses and Dissertations

The implementation of curriculum change, and innovative pedagogical theory, can help educators and administrators in higher education further the learning gains of students in the sciences. But the introduction of new methods of teaching, or curricular restructuring, can be interpreted by students differently, potentially affecting students' emotional states as well as their relationships with peers. To support not only the learning of students, but also their emotional and social well-being, pedagogical and curricular theory should be enacted in ways that take into consideration the full scope of the student experience. In this dissertation, the implementation of curriculum and pedagogical theory, …

Combating Fungal Pathogens (Helminthosporium Solani, Pythium Ultimum) With Secondary Metabolites Of Streptomyces Bacteria, Erik W. Kemp

Theses and Dissertations

Fungal diseases, Pythium ultimum (Pythium leak) and Helminthosporium solani (silver scurf) have detrimental effects on potato tuber (Solanum tuberosum) quality and yield. Tubers are the world’s fourth largest agricultural food crop and are crucial for feeding a growing population. Bacteria from the genus Streptomyces are known for producing a wide variety of secondary metabolites with antifungal properties. Isolates of Streptomyces have recently shown inhibitory effects towards P. ultimum and H. solani in Petri dish assays. These data suggest that Streptomyces may work as a biocontrol to protect tubers from P. ultimum and H. solani. We tested talc-based powder formulas for …

Male And Female Victims Experience Different Types Of Sexual Assault, Carolyn Allen, Samuel Payne, Julie Valentine

Library/Life Sciences Undergraduate Poster Competition 2022

Intro:

• Sexual assault kits (SAKs) contain forensic evidence and are collected following an assault
• Most research on SAK processing has been done with combined male and female assaults
• 10% of victims are male
• There is lots of research on female victims, but very little research on male victims

Polymer Coated Urea Microplastics: Sweet Corn, Benjamin T. Geary, C. J. Seely, B. G. Hopkins

Library/Life Sciences Undergraduate Poster Competition 2022

• Polymer Coated Urea (PCU) is beneficial for providing the food, fuel, and fiber needed for the nearly 8 billion people on earth.

• Microplastics, from a wide range of waste materials, pollute water bodies.

• One potential source of microplastics are from PCU fertilizers if the coatings are transported overland into water bodies.

• Various agricultural application methods vary in potential for surface runoff.

Objective • Determine the microplastic concentrations from runoff water for strip injection, surface unincorporated, and broadcast incorporated application in sweet corn.

Low-Cost Prosthetic Feet For Underserved Populations: A Comparison Of Gait Analysis And Mechanical Stiffness, Kaleigh Renninger, Brevin Banks, Dustin A. Bruening

Library/Life Sciences Undergraduate Poster Competition 2022

• Lower limb loss is an ongoing cause of disability throughout the world.
• Despite advancements in prosthetic technologies, there are numerous underserved populations in need of effective low-cost prosthetic foot options.

In-Class Evolution Discussions Change Bible Interpretation, Jessica Abele

Library/Life Sciences Undergraduate Poster Competition 2022

Conflict between religion and evolution is a major barrier for religious biology students. Educators have been working to increase evolution acceptance by using a variety of methods (e.g., increasing evolution knowledge, addressing creationism in class, etc.) with little success. However, recent research shows using a reconciliatory approach to evolution and religion increases evolution acceptance while overall religiosity is unaffected (Lindsay et al., 2019).

Genes Critical For Flagellar Motility In Agrobacterium Fabrum, Audrey Memmott, Joel Griffitts

Library/Life Sciences Undergraduate Poster Competition 2022

The flagellum contains 24 structural proteins that are vital for bacterial motility and virulence (Liu). Additionally, these structural proteins must be assembled in the correct order and orientation for a bacterium to be motile via its flagellum (Armitage). Our current knowledge regarding the flagellum is limited, however, because the majority of it comes from studies focused on Escherichia coli. To increase existing knowledge regarding the flagellum and the genes vital for its functionality, we attempted to define all the genes vital for flagellar motility in A. fabrum by analyzing motility when specific genes are disrupted.

Dietary And Energetic Trends Of The Invasive Asian Shore Crab, Tanner Reese, Blaine D. Griffen

Library/Life Sciences Undergraduate Poster Competition 2022

The Asian shore crab, Hemigrapsus sanguineus , is an invasive crab species that lives on the East Coast of the United States. It has become an important part of its invaded ecosystems and their energetic interactions. We studied this species’ energetics to better understand how they vary across season and latitude.

• The ratio of gut width to carapace width (“standardized gut size”) is indicative of long term diet quality in crabs (a larger gut corresponds to a lower average diet quality) (Griffen & Mosblack 2011)
• We measured standardized gut size and gut energy content to examine how this species’ diet …

The Effects Of Exercise On Inflammatory Biomarkers Over A 36-H Fast, Austin F. Duersch, Bruce W. Bailey, Landon S. Deru, Jacob Coleman, Hunter Chamberlain, Spencer Cleverly

Library/Life Sciences Undergraduate Poster Competition 2022

Diet-induced chronic inflammation has become a popular point of discussion over recent years in lifestyle medicine as studies have uncovered the effects that inflammation markers have on chronic diseases including heart disease, diabetes, and arthritis. Each time we eat, an immune response is stimulated resulting in increased levels of inflammatory biomarkers.1,2 Interventions to help lower inflammation could help promote longevity and decrease risk of chronic diseases. This study assessed the impact of an acute 36h fast with and without exercise at the beginning on inflammatory biomarkers IL-6, C-peptide, GIP, MCP-1, and TNF-alpha.

Prostate-Specific Antigen Screening According To Health Professional Counseling And Age In The United States, Seth A. Otto, Ray M. Merrill

Library/Life Sciences Undergraduate Poster Competition 2022

To determine the prevalence of PSA testing in men according to age, reasons for undergoing testing, and whether a discussion about harms and benefits took place with a doctor prior to testing.

Eeg As Successful Diagnostic Tool For Immune Effector Cell Associated Neurotoxicity Syndrome, Daniel Jones, Christine Eckhardt, Haoqi Sun, Ryan Tesh, Brandon Westover

Library/Life Sciences Undergraduate Poster Competition 2022

CAR T cell therapy was first proven effective in 2013¹ for the treatment of certain cancer s . However, its widespread adoption is still hindered by side effects like immune effector cell associated neurotoxicity syndrome (ICANS). Current research aims to better predict, diagnose, and treat ICANS so that CAR T cell therapy can be more widely applied. Although prior studies have attempted to identify an objective biomarker of ICANS² , current practice relies on clinical assessment to diagnose ICANS. We hypothesize that qualitative features of the EEG may be utilized to develop a physiological grading system of the …

Interruption Of Junctional Adhesion Molecules Shows Developmental Defects, Wesley Allen, Nathan Beckett, Lauren Hall, Emma Holdaway, Sion Jung, Meredith Mann, Spencer Thacker, Jacob Wengler, Cailey Winn, Dario Mizrachi, Michael Stark

Library/Life Sciences Undergraduate Poster Competition 2022

Development of the central nervous system, the brain and the spinal cord, starts initially with the formation of the neural tube. This vital process starts as a sheet of cells which then folds into a cylindrical structure in the early stages of embryo development (Fig1). Defects in the formation of the neural tube can lead to permanent disabilities in babies after birth. This is important to understand as current statistics show that approximately 300,000 babies are born annually with neural tube defects. (NTDs). In addition to NTDs there are many other dangerous birth defects that are important to understand as …

Introducing Xanthoria Parietina: Invasive, Naturalized, Or Opportunistic?, Mikele Baugh, Steve Leavitt

Library/Life Sciences Undergraduate Poster Competition 2022

Lichens are one of the world’s ubiquitous group of organisms. They have been documented from frigid tundras to arid deserts. While some species are known to be particularly hardy and flexible in their habitats, many species are linked to specific growing conditions. As the global climate changes, the geographical range for different growing conditions shifts. Economic trade and human travel provide new opportunities for species to access new locations that are beginning to develop habitable conditions. Xanthoria parietina has been observed in the Great Basin (a region outside of its typical coastal distribution) found in newly built horticultural landscapes. Individuals …

Survey Of Visual Opsin Evolution Across Caddisflies (Insecta: Trichoptera), Ashlynn Powell, Jacqueline Heckenhauer, Steffen Pauls, Paul Frandsen

Library/Life Sciences Undergraduate Poster Competition 2022

Caddisflies are a highly diverse order of aquatic insects. As eggs, larvae, and pupae, they occupy freshwater habitats, while as adults, they are generally aerial and terrestrial¹. Such varied environments call for a flexible and complex visual system. Visual systems are controlled by light-sensing molecules called opsins, which are categorized by the wavelength of light they are most sensitive to². In insects, these categories are:

• Long wavelength (LW)
• Short wavelength (SW)
• Ultraviolet wavelength (UV)

Adaptive duplication of opsin genes is the primary mechanism of evolution that allows for greater visual capacity³. While opsins have …