Life Sciences Commons^™

Urban Green Spaces, Sustainability Discourse, And Environmental Inequality In Agadir, Morocco, Julia Card

Morocco: Human Rights, Social Justice, and Cultural Transformation

As Moroccan cities experience rising temperatures, increased drought, and rapid urban development, urban green spaces have become central to sustainability and climate adaptation agendas. However, the social, ecological, and political implications of urban greening remain unevenly examined in semi-arid contexts. This paper investigates how green spaces are envisioned, implemented, and experienced in Agadir, a coastal city shaped by colonial planning legacies, post-earthquake reconstruction, water scarcity, and event-driven redevelopment. Using a qualitative methodology combining a visual content analysis of the 2022–2027 Agadir Communal Action Plan with semi-structured interviews with local experts in agronomy, landscape architecture, geography, and regional planning, this study …

Dataset Of Raman Spectra And Matlab Code For: Elucidating Time-Resolved Intracellular Metabolic Dynamics Via Label-Free Raman Microspectroscopy And 2d Correlation Spectroscopy, Zohreh Mirveis, Nitin Patil, Hugh J. Byrne

Other Resources

This dataset contains raw spectral data obtained from single-cell Raman microspectroscopy under two nutritional conditions: glucose alone and glucose supplemented with glutamine. LLC-MK2 cells were starved for 2 h, then exposed to nutrients and fixed every 15 min for up to 120 min. At each time point, spectra were recorded from 25 individual cells (cytoplasm regions) and exported as machine-readable files (.csv). MATLAB scripts are provided to implement two-dimensional correlation spectroscopy (2D-COS) for generating synchronous maps, along with utilities for loading spectra, averaging, and reproducing key figures. A set of simulated time-series spectra used to validate 2D-COS under high background …

Complex Interplay Between Facilitation And Competition In Two Invasive Fruit Pests Data, Eleanor Mccabe, Nicholas Teets Phd

Entomology Research Data

When one invasive species facilitates the invasion of another species, it can lead to invasional meltdown. However, when the two species depend on the same finite resource, facilitation and competition can occur simultaneously and impact population dynamics. Furthermore, factors like resource availability and population density could alter the balance between facilitation and competition. Drosophila suzukii and Zaprionus indianus are two invasive insect pests that infest small fruit crops. The co-localization of these species in the same fields, coupled with the fact that Z. indianus lacks a hardened ovipositor that can penetrate the skin of fruit, has led to the hypothesis …

Data From: Nek4 Suppresses Cell Proliferation In Bt20 Triple-Negative Breast Cancer Cells By Diminishing Expression Of Cell Cycle Genes, While Its Depletion Mitigates Proliferation In Other Cell Lines, Amanda Ashley

Chemistry & Biochemistry: Datasets

No abstract provided.

Fabrication, Calibration, And Deployment Of A Home-Made Radiometer, Callum Flowerday, Ryan Thalman, Jaron Hansen

ScholarsArchive Data

Subfolders and Contents:

Chamber Characterization: Contains emission spectrum measured from inside the chamber with converted spectra to power and photon flux.

LED Calibration: (Each calibration file contains folders of data from each LED used in calibration)

• Cone
• Cone 2
• Dome 2
• Flat Top
• Quartz Rod
• Uniform Dome

Outside:

• Cone 2 front porch
• Cone 2 roof
• Flat top

The Dynamic Responses Of The Mouse Gut Microbiome To Dietary Supplementation With Various Anthocyanin-Rich Foods In The Context Of A Western Diet, Abby D. Benninghoff

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Background/Objectives: Chronic inflammation and Western-style diets elevate colorectal cancer (CRC) risk, particularly in individuals with colitis, a feature of inflammatory bowel disease (IBD). Diets rich in polyphenol-containing functional foods, such as cocoa, may reduce gut inflammation and modulate the gut microbiome. This study examined the effects of cocoa polyphenol (CP) supplementation on inflammation and microbiome composition before, during, and after colitis in mice fed either a healthy or Western diet. We hypothesized that CPs would attenuate inflammation and promote distinct micro-biome shifts, especially in the context of a Western diet. Methods: A 2×2 factorial design tested the effects of basal …

Refinement And Application Of The Absorption Cross-Section Of Molecular Bromine With Relevance To Atmospheric Chemistry, Callum Flowerday, Ryan Thalman, Jaron C. Hansen, Eric T. Sevy, Jason J. Sorensen, Matthew C. Asplund

ScholarsArchive Data

Defined Br2 XS - is the defined absorption cross-section using the UVvis spectrophotometer.

BBCEAS - This is raw absorption data measured using the BBCEAS (see article for details).

UVvis raw - This is the raw absorption data measured using the UVvis spectrophotometer.

Dataset Supporting The Manuscript Promoting Awareness And Adoption Of Biochar As A Soil Amendment: Effect Of Message Framing, Tong Wang, David Wiltse, Filip Viskupic, Akinsola Oyebanji

South Dakota Farm Survey

A farmer survey was conducted from February 22nd to March 9th, 2025 to test the impact of message framing on farmers’ learning and adoption decisions of biochar. The survey targeted operators of farms in Eastern South Dakota where the production of corn requires chemical fertilizer is intensively used as a crucial input. Biochar as a soil amendment has the potential to serve as a partial substitute for chemical fertilizer in our studied region. A sample of 10,000 South Dakota farming operations east of the Missouri River (where climate favors row crop production) was randomly drawn from those who participated in …

Data From: The Dynamic Responses Of The Mouse Gut Microbiome To Dietary Supplementation With Various Anthocyanin-Rich Foods In The Context Of A Western Diet, Abby D. Benninghoff

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Background/Objectives: Anthocyanin (ACN)-rich foods may support gut health by modulating the microbiome and reducing inflammation, potentially lowering the risk of colitis-associated colorectal cancer. However, the dynamic response of the gut microbiome to ACN-rich diets is not well characterized, including in the context of structural and compositional differences among ACN-containing foods. This study examined the temporal response of the mouse gut microbiome to dietary ACNs, focusing on the impact of structural variation. We hypothesized that microbiome shifts would occur rapidly but require sustained dietary ACN intake to persist. Methods: C57BL/6J mice were fed the total Western diet (TWD) supplemented with freeze-dried …

Yellow Stingray (Urobatis Jamaicensis) Jaw, Marissa Rosas, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Avian Detection Data And Environmental Covariates For Utah, Usa Over The Years 2017-2021, Amanda L. Hayes-Puttfarcken

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Integrated Monitoring in Bird Conservation Regions (IMBCR) detection data for the state of Utah, USA, and LANDFIRE uncharacteristic exotic Departure Score data over Utah during our study period, as well as additional environmental covariates used to make the model more ecologically accurate. Environmental covariates include average May precipitation, average June temperature, distance to the nearest road, percent canopy cover, and the percent of three habitat types as defined by LANDFIRE; open tree canopy, herbaceous, and shrubland.

Atlantic Sharpnose Shark (Rhizoprionodon Terraenovae) Jaw, Nicholas Burchett, David Kerstetter, Derek Burkholder

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Resistant & Persistent Bacterial Cells, Jean-Louis Bru

Open Educational Resources

An activity on the difference between resistant & persistent bacterial cells. This activity aims to build on the pre-lecture materials about resistant bacterial cells, so that students can make a connection toward persistent cells. In both cases, they make antibiotics less effective.

Learning Objectives

Recognize the importance of antibiotics in fighting bacterial infections. Understand how bacterial species become antibiotic resistant. Determine the difference between resistant and persistent bacterial cells.

Social and Collaborative

Students work together on this in-class activity in groups of 2-4 (3, ideally). Each student will have one of the following roles: encourager, recorded, investigator, and time keeper. …

Atlantic Sharpnose Shark (Rhizoprionodon Terraenovae) Neurocranium, Michelle Bassali, David Kerstetter, Ema Nagel

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Atlantic Sharpnose Shark (Rhizoprionodon Terraenovae) Jaw, Michelle Bassali, David Kerstetter, Ema Nagel

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Mindfulness In Motion: Development Of A Post-Operative Protocol For Rotator Cuff Repair Using Reformer Pilates, Carrington M. Lee

Entry-Level Occupational Therapy Doctorate - Doctoral Capstone Symposium

INTRODUCTION: Reformer Pilates, based on values of breath, whole-body health, whole-body commitment, and whole-body encompassing mind, body, and spirit, is a form of low-impact exercises using a specialized machine with springs and straps to gauge resistance, primarily targeting core and postural strength. Evidence demonstrates the use of Reformer Pilates in rehabilitation, signifying improvement in chronic pain, physical health, and mental health compared to traditional therapies. Local adult outpatient clinic prioritizes movement in rehabilitation by using Reformer Pilates, incorporating this into treatment during occupational therapy (OT) and physical therapy (PT) sessions. The clinic has a significant number of patients with post-op …

Atlantic Sharpnose (Rhizoprionodon Terraenovae) Jaw, Rileigh Gonzalez, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Examination Of Protective Mucosal Immune Responses To Viral Sexually Transmitted Infections, Aisha Lee

Arts & Sciences Graduate Student Theses and Dissertations

Sexually transmitted infections (STI) are a prominent global health issue that affect the sexual and reproductive health of billions worldwide. Viral STIs present a particular challenge due to limited availability of treatment options and their frequent establishment of lifelong infection. One of the most common viral STIs is genital herpes, a recurrent ulcerative disease caused by chronic infection with the human alphaherpesviruses, HSV-1 or HSV-2. Women are particularly susceptible to morbidities of infection ranging from increased risk of HIV-1 acquisition to vertical transfer to neonates, for whom infection can be fatal. Previous efforts to develop a prophylactic vaccine for genital …

Weed Incursion Of Irrigated Forage–Forb Mixtures Under Mob Grazing Or Mowing In The Mountain West Usa, Jennifer Macadam, Jared Gibbons, Xin Dai

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Improving the quality of irrigated pastures can increase the profitability of ruminant production systems. Increasing pasture plant biodiversity is beneficial for ruminants, pollinators, and soil health, but it is challenging to manage weed incursion in seeded mixed-species pastures. This study assessed the weed incursion that resulted when forage legumes or grasses were seeded as binary mixtures with one of four non-legume forbs. Defoliation occurred at 6-week intervals as either mowing or mob grazing. Forbs were chicory, plantain, Lewis flax, or small burnet and forages were alfalfa, birdsfoot trefoil, creeping foxtail, intermediate wheatgrass, kura clover, meadow bromegrass, orchardgrass, perennial ryegrass, reed …

Lake Powell Fish Sampling: Glen Canyon Dam Forebay Area, 2022 And 2023, Phaedra Budy, Casey Pennock

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Native fishes face imperilment due to habitat loss and fragmentation, megadrought, invasive species, and synergies amongst threats. These threats coalesce at Glen Canyon Dam (GCD), which impounds the Colorado River to create Lake Powell, a reservoir inhabited by a suite of nonnative fishes. Water level in Lake Powell has declined precipitously due to water overallocation and megadrought, increasing the risk of nonnative fish entrainment through the dam, as the penstocks draw water from the epilimnion. Our goal was to characterize the distribution and abundance of nonnative fishes in the vicinity of GCD and identify environmental conditions that may increase entrainment. …

(Winter Skate (Leucoraja Ocellata)) Jaw, Michael A. Birnbaum, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Pesticide Runoff From Conventional, Minimum, And No-Tillage Cropping Systems: Meta-Analysis Of Published North American Data, Daniel Fleming, Dave Spencer, Chicot Irrigation

WRRI Publications

Pesticide applications may soon be regulated by laws predicated on the presupposition that reducing tillage, and thereby increasing soil surface crop residue cover, decreases sorbed and soluble agrochemical losses in surface runoff and erosion. This analysis was conducted to determine whether pesticide transport via surface runoff and erosion could be manipulated by tillage practices. Estimates of the amounts of crop residue cover within each tillage practice were averaged from data reported in the original articles. Response ratios of the paired means of runoff, erosion, and pesticide losses and concentrations from the effects of tillage practices were meta-analyzed as paired t-tests …

Drone Thermal Imaging And Benthic Time-Series Analysis Show Dynamic Spatial And Temporal Delivery Of Submarine Groundwater Discharge On Reef Ecosystems, Sophia G. Zummo, Florybeth F. La Valle, Lucian Himes

Faculty Data Sets

Submarine groundwater discharge (SGD) introduces nutrient-rich, low-salinity water into coastal ecosystems, significantly altering reef biogeochemistry. At Black Point, Oʻahu, we employed a novel, two-pronged approach that integrates a cost-effective small unmanned aerial system equipped with a thermal infrared (sUAS-TIR) sensor and high-resolution benthic salinity time series to resolve previously unobserved, fine-scale patterns of SGD delivery. sUAS-based sampling overcomes key limitations of prior SGD mapping methods, such as labor-intensive and spatially constrained in situ sampling, by enabling rapid deployment, real-time visualization of mixing dynamics, and high-resolution imagery. Unlike previous studies that relied on customized systems that required independent sensor integration, our …

Lead Bioaccessibility And Commonly Measured Soil Characteristics (Detroit, Mi, Usa) Phase Ii, Conor T. Gowan, Sabrina R. Good, Allison R. Harris, Patrick Crouch, Shawn P. Mcelmurry

Open Data at Wayne State

Urban soil contaminated with anthropogenic sources of Pb is a major contributor to child Pb exposure. To assess the Pb risk in urban areas, composite samples were collected from 142 voluntary privately owned 142 residential parcels in Detroit, Hamtramck, and Highland Park, Michigan. Samples were collected at two time periods, before and after treatment applied for those denoted as treatment sites. Samples were collected from areas covered with turf grass on the parcels from the front, middle and rear sections. Soils were collected with a bulb planter at approximately 10cm depth and were cleaned with a tap water-Liquinox detergent solution …

Kinetic Model Of Glycolysis And Glutaminolysis Interplay Developed In Matlab Simbiology, Zohreh Mirveis, Hugh J. Byrne, Nitin Patil

Datasets

This dataset contains a kinetic model developed in MATLAB SimBiology to simulate the metabolic dynamics of glycolysis and glutaminolysis and their interconnection. The model was used in the study ‘Experimental and computational investigation of the kinetic evolution of the glutaminolysis pathway and its interplay with the glycolysis pathway’ (Mirveis et al., 2024). The dataset includes the original SimBiology project file together with the experimental data used for model training. These resources enable reproduction of the simulations reported in the publication and provide a reusable framework for further computational exploration of metabolic pathway kinetics.

Open Path Spectroscopic Detection Of The Hydroxyl Radical: A Comparison Between Broadband Cavity-Enhanced Absorption Spectroscopy (Bbceas) And Bbceas Coupled With A Fabry-Pérot Interferometer (Bbceas-Fp), Callum Flowerday, Ryan Thalman, Matthew C. Asplund, Samuel A. Badstubner, Adam K. Cook, Philip Lundrigan, Jaron C. Hansen

ScholarsArchive Data

Data collected by the BBCEAS and BBCEAS-FP instruments described in the paper "Open Path Spectroscopic Detection of the Hydroxyl Radical: A Comparison Between Broadband Cavity-Enhanced Absorption Spectroscopy (BBCEAS) and BBCEAS coupled with a Fabry-Pérot Interferometer (BBCEAS-FP)"

The Neutral Detergent Fiber And The Acid Detergent Fiber Of The Grass Samples Between Small/Frequent And Large/Infrequent Rainfall Treatments In The C3 And C4 Plant Communities., Zigeng Chen, A. Joshua Leffler

NRM Departmental Data Sets

Data description:
Month: Time of data collection from 2020 to 2022.
Plant community: C3 and C4 plant community.
Treatment: small/frequent (S/F) and large/infrequent (L/I) rainfall treatment.
NDF (g/g DM): The dry matter content of neutral detergent fiber in the grass samples.
ADF(g/g DM): The dry matter content of acid detergent fiber in the grass samples. Cellulose (g/g DM): The dry matter content of cellulose in the grass samples.
Lignin (g/g DM): The dry matter content of lignin in the grass samples.

File type: .csv
File size: 16 KB

Tree Rings Reveal Mixtures Of Aspen And Spruce Exhibit Greater Drought Resilience In A Planted Field Experiment, Jéssica Chaves Cardoso, Linhao Wu, Marcel Schneider, Charles A. Nock

Aspen Bibliography

Boreal forests provide a wealth of ecosystem services, many of which are linked to forest productivity. Climate change is expected to increase the frequency, duration, and severity of drought, and undermine the productivity of western boreal forests. Favouring species mixtures has emerged as a potential strategy to increase forest resilience to drought. To test the hypothesis that mixtures of trembling aspen and white spruce were more productive than pure stands because they were more resistant and resilient to drought, we analyzed community and species responses to drought utilizing measurements of annual growth obtained from stem disc samples from a planted …

Cyperus Blepharoleptos Maxent Ecological Niche Models, Samuel A. Schmid, Maxwell G. Gebhart, Gray Turnage

GRI Publications

Invasive species are one of the foremost threats to global biodiversity and predicting where they can inhabit is of primary concern for researchers and resource managers. Ecological niche models (ENMs) are a useful tool for addressing this problem. This study focuses on Cyperus blepharoleptos (Cuban bulrush), an aquatic sedge that is invasive in the southeastern United States. To model the ecological niche of C. blepharoleptos, 1,137 records were compiled from North and South America and partitioned into training and testing data. Five BioClim variables (BIO1, BIO7, BIO12, BIO14, and BIO15) were selected as environmental variables for modeling. Using Maxent, 12 …

Black Grouper (Mycteroperca Bonaci) Neurocranium, Nicholas Burchett, Kelsee Rotering, Marissa Rosas, David Kerstetter, Derek Burkholder

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.