Life Sciences Commons^™

Sharpnose (Rhizoprionodon Terraenovae) Jaw, Juliana N. Ottens-Rivera, Fiona Smith, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Jaw from 76cm total length (TL) Rhizoprionodon genus (Sharpnose), collected from Anglers Bait & Tackle on Feb 5th, 2024, by Juliana Ottens-Rivera

Citdet, Jordan A. James, Heather K. Manching, Matthew R. Mattia, Kim D. Bowman, Amanda M. Hulse-Kemp, William J. Beksi

Computer Science and Engineering Datasets - Archive

The CitDet dataset is composed of images captured at the USDA Agricultural Research Service Subtropical Insects and Horticulture Research Unit in Fort Pierce, FL, USA. Data was collected between October 2021 and October 2022. 579 images were captured from different sections of the orchard using the open-source application Field Book on Android tablets. While collecting images, we faced the camera in a portrait orientation directly centered on the tree of interest. All images were taken at the edge of the soil in the tree row to simulate a ground-based robot imaging the tree while moving between two rows of trees. …

Dna-Pkcs Rnaseq Data: Dna-Pkcs Wilde-Type Or Kinase-Dead Protein Regulate Basal And Etoposide-Induced Gene Expression Changes, Amanda Ashley

Chemistry & Biochemistry: Datasets

No abstract provided.

Cook2024_Influence Of Planting Depth Data, Kyle A. Cook, Brad Geary, Phil S. Allen, April Hulet, Kevin Gunnell, Melissa Landeen, Shannon V. Nelson, Matthew D. Madsen

ScholarsArchive Data

This file contains the data description for the Cook2024_1_Influence of Planting Depth… Supplementary File.

The excel file contains two worksheets: 1) Lab Trial Data, and 2) Field Trial Data.

1) Lab Trial Data

A) Block: block (rep) of the sample

B) Soil Type: soil type for that sample- loam, sandy-loam, or loamy-sand

C) Seed Treatment: seed treatment, control or coated

D) Seeding Depth (mm): depth, in mm, the seeds were planted- 0, 3.2, 6.3, 12.7

E) Week 1 Emerge: total number of seedlings emerged in Week 1

F) Week 2 Emerge: total number of seedlings emerged in Week 2 (includes …

Hazara University's Monocot Specimen Data In Openherbarium.Org On 20 December 2023, Mary Barkworth, Liaqat Ullah, Abdul Majid, Ghulam Mujtaba Shah, Jan Alam

Browse all Datasets

Northern Pakistan is interpreted here as including three administrative regions: Khyber Pakhtunkhwa, Gilgit-Baltistan, and Azad Jammu and Kashmir. It is dominated by multiple mountain ranges whose valleys drain, directly or indirectly, into the Indus River. Hazara University, which is in Khyber Pakhtunkhwa, was started in 2002 and its herbarium (HUP) in 2005. Digitization of the herbarium's vascular plants began in 2021 with its records being shared in OpenHerbarium and GBIF. Its online presence is now growing more rapidly than any other Pakistani herbarium. This paper summarizes the taxonomic diversity and geographic origin of its monocot holdings in 2023. In 2023, …

Historical Analysis Of Urban Dust Generated By The Great Salt Lake Playa, Callum Flowerday, Jaron C. Hansen, Rebekah Stanley, Kaitlyn Brewster

ScholarsArchive Data

Historical PM10 filters, provided by the Utah Division of Air Quality, were analyzed for elemental composition of various metals. This was done using ICP-MS.

Also included, EPA PM10 historical data and bathymetry data provided by the Utah USGS.

An Observational Framework For Constructing Ozone Isopleths From Long-Term Monitoring Data: Demonstration In Salt Lake City, Utah, Callum Flowerday, Isaac Sudweeks, Brad Adams, Jaron C. Hansen

ScholarsArchive Data

EPA quality assured data, collected by the Utah Division of Air Quality, was used for this analysis.

Data From: Unveiling The Physical Properties Predictive Of Oil Binding Capacity In An Interesterified Palm-Based Fat, Melissa Marsh, Brennan Bean, Farnaz Maleky, Silvana Martini

Browse all Datasets

This paper identifies physical properties of an interesterified palm-based fat (EIEPO) that predict oil binding capacity (OBC). A 100% EIEPO sample, 50% EIEPO sample diluted with 50% soybean oil (SBO), and a 20% EIEPO sample diluted with 80% SBO were used to test how saturation level impacts OBC. All samples were crystallized using either a fast (6.4°C/min) or slow (0.1°C/min) cooling rate as well as with or without the application of high-intensity ultrasound (HIU; 20kHz) to generate a wide range of physical properties. Immediately after crystallization, the sample's physical properties, including crystal microstructure, solid fat content (SFC), viscoelasticity (G', G", …

Greater Sage-Grouse Brood Locations On Parker Mountain Utah 1998-2009, David Dahlgren

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Species of conservation concern are often habitat specialists, posing significant risk to those species when specific plant communities are threatened. Despite this, practitioners habitually focus conservation efforts on these singular communities, while ignoring ecological mechanisms that explain the wildlife-plant relationships. In doing so, practitioners may overlook alternative vegetation communities that could maintain wildlife populations under alternative conditions (e.g., climate change). Here, we term these areas surrogate habitat, defined as "vegetation communities or resource sites that provide similar critical resources to conventional sites," and assess their potential for conservation using a case-study of Greater sage-grouse (Centrocercus urophasianus) on Parker Mountain, Utah …

Texcot22, Md Ahmed Al Muzaddid, William J. Beksi

Computer Science and Engineering Datasets - Archive

The TexCot22 dataset is a set of cotton crop video sequences for training and testing multi-object tracking methods. Each tracking sequence is 10 to 20 seconds in length. The dataset contains of a total of 30 sequences of which 17 are for training and the remaining 13 are for testing. Among the training sequences, 2 of them consist of roughly 5,000 annotated images, which can be used to train a cotton boll detection model. The video sequences were captured at 4K resolution and at distinct frame rates (e.g., 10, 15, 30). There are typically 2 to 10 cotton bolls per …

Biomass Distribution Of Benthosema Glaciale And Maurolicus Muelleri In The North Atlantic, Fabio Berzaghi, Laurene Merillet, Anna Conchon, Morten Skogen, Emma Dolmaire, Espen Strand, Douglas Speirs, Webjørn Melle, Mary S. Wisz

Datasets

This dataset contains maps of biomass estimates of Maurolicus muelleri and Benthosema glaciale created using the output of three models from the MEESO project. Maps represent an average biomass distribution and not any specific year, please note the distribution of biomass varies in time. For more details please consult the metadata on the ICES website.

199965, David Kerstetter

PERC Albacore sPAT Data

Datasets (and supporting material) from 4sPAT electronic tags deployed on albacore caught by pelagic longline gear in the western North Atlantic.

199953, David Kerstetter

PERC Albacore sPAT Data

Datasets (and supporting material) from 4sPAT electronic tags deployed on albacore caught by pelagic longline gear in the western North Atlantic.

199949, David Kerstetter

PERC Albacore sPAT Data

Datasets (and supporting material) from 4sPAT electronic tags deployed on albacore caught by pelagic longline gear in the western North Atlantic.

199946, David W. Kerstetter

PERC Albacore sPAT Data

Datasets (and supporting material) from 4sPAT electronic tags deployed on albacore caught by pelagic longline gear in the western North Atlantic.

Data For: "Polyethylene Polymer Type And Soil Properties Determine Impacts Of Microplastic Pollution On Arugula Growth", Noah P. Walsh, Ella Beaghen, Abigail Kane, Leilani M. Santodomingo, Daniel Watson, Christina S. Baer

First-Year Research Immersion (FRI) Scholarship

From the manuscript abstract:

While microplastics have become a novel pollutant of concern, few studies have directly compared different polymers’ effects on plants. We investigated the effects of high-density (HDPE) and low-density (LDPE) polyethylene on arugula growth. We hypothesized that polyethylene microplastics would inhibit growth and that LDPE would have a greater effect than HDPE due to its branched structure and lower density. We grew arugula (Eruca vesicaria) in plain soil or soil mixed with HDPE or LDPE microplastics. To determine if microplastic effects are dependent on soil quality, we used two kinds of fresh soil and reused one type …

A Bayesian Approach To The Analysis Of Dose-Response Data: Estimating Natural Survivorship Without Abbott’S Correction And Inclusion Of Overdispersion Estimates, Michael A. Caprio, Jose B. Malaquias, Dominic Reisig

CALS Publications

We assessed the utility of a Bayesian analysis of dose-mortality curves using probit analysis. A Bayesian equivalent of a conventional single population probit analysis using Abbott’s correction demonstrated the ability of the Bayesian model to recover parameters from generative data. We then developed a model that removed Abbott’s correction and estimated natural survivorship as part of the overall model fitting process. Based on WAIC (information content) scores, this model was selected over the model using Abbott’s corrected data in 196 out of 200 randomly generated datasets. This suggests that considerable information on control survivorship exists in the response to treated …

Invasion Ecology Of Alternanthera Philoxeroides, Cyperus Blepharoleptos, Panicum Repens, And Triadica Sebifera, Samuel A. Schmid, Adrián Lázaro-Lobo, Cory M. Shoemaker, Andrew Sample, Mackenzie Cade, Gary N. Ervin, Gray Turnage

GRI Publications

Several invasion ecology hypotheses explain patterns of invasion, but these effects are often complex and multifaceted. Within the study of aquatic invasive species, small aquatic ecosystems are often neglected, despite them representing most global freshwater bodies. This study uses community composition and environmental and geographic factors to explain the occurrence of invasive species in small lakes in the southeastern United States. Specifically, this study predicted that several ecosystem factors would predict the probability of occurrence of invasive species of the lakes studied. Four of the most common invasive species were selected as the focus of this study: Alternanthera philoxeroides, Cyperus …

Lead Bioaccessibility And Commonly Measured Soil Characteristics (Detroit, Mi, Usa) – Phase 1, Sabrina R. Good, Allison R. Harris, Patrick Crouch, Conor T. Gowan, William D. Shuster, Shawn P. Mcelmurry

Open Data at Wayne State

Contaminated urban soil is one of the major contributors to child Pb exposure. To gain a better understanding of Pb risk in urban areas, composite samples were collected from 142 residential, privately owned, parcels in Detroit, Hamtramck, and Highland Park, Michigan, with approval from the property owners. The proximity of soil sampling and former smelter locations were also reported. Sample were collected from areas covered with turf grass. Four samples were collected, one from each cardinal direction (north, south, east, and west), 20 cm from an aluminum tent stake driven into the center of the sampling site. Soils were collected …

Maxent Ecological Niche Models For Alternanthera Philoxeroides, Amynothrips Andersoni, And Agasicles Hygrophila, Samuel A. Schmid, Andrés F. Sánchez-Restrepo, Alejandro J. Sosa, Gray Turnage, Gary N. Ervin

CAS Publications

Alternanthera philoxeroides is an aquatic invasive weed from South America with a long history of biological control. The well-studied Agasicles hygrophila (alligatorweed flea beetle) successfully controls Al. philoxeroides in some parts of its invaded range, but Ag. hygrophila is unsuitable in other areas due to its intolerance to cold temperatures. An understudied biological control agent, Amynothrips andersoni (alligatorweed thrips) has shown greater tolerance to cold temperatures, but no research has been conducted to determine its ecological niche with respect to Al. philoxeroides. Additionally, climate change is predicted to shift the ecological niches of species globally, and these changes must be …

Data From: Phylogenomic Species Delimitation Of Studfishes (Fundulidae: Fundulus): Evidence For Cryptic Species In Agreement With The Central Highlands Vicariance Hypothesis, Kayla M. Fast, Peter J. Hundt, Zachariah D. Alley, Michael W. Sandel

CFR Publications

The Central Highlands ecoregion of the eastern United States represents a hotspot of freshwater biodiversity, with replicated patterns of vicariant speciation east and west of the Mississippi River. Previous phylogeographic investigation of the studfishes (Fundulus subgenus Fundulus) revealed evidence for vicariant speciation in the Central Highlands, but data were limited to a small number of gene sequences generated with Sanger sequencing. We used double digest restriction-site associated DNA sequencing (ddRADseq) to improve resolution of phylogeographic patterns and better characterize population genetic variation. Our sample design included individuals from the Fundulus catenatus species group (F. catenatus, F. bifax, …

Wildar Northeast Florida, Kailan Sindelar

UNF Faculty Research and Scholarship

Learn about some of the unique aspects of life in the wetlands and rivers of Northeast Florida and how we study them. In this app players see the memories of a student at the University of North Florida play out in front of them in AR. This app was created with funding the Digital Humanities Institute at the University of North Florida and informed by subject matter experts at the university.

Quantitative Raman Analysis Of Human Blood Serum Of Glaucoma Patients Supplemented With Macular Pigment Carotenoids., Joy Udensi, Ekaterina Loskutova, James Loughman, Hugh J. Byrne

Datasets

Carotenoids have been widely studied for their high dietary, antioxidant, and vision protection roles in the human body. Blood contains all major dietary carotenoids and hence presents as a suitable and efficient substrate for the estimation of dietary carotenoids in vivo. Following the 18-month supplementation of open angle glaucoma patients with macula pigment carotenoids (Lutein, Zeaxanthin and Meso-Zeaxanthin) in the European Nutrition in Glaucoma Management (ENIGMA) trial, Raman spectroscopic analysis of the pre-supplementation baseline and 18-month supplemented blood serum carotenoids from participants was carried out, to investigate the systemic impact of supplementation in the blood and explore a more direct …

Important Factors Contributing To The Burn Severity Of The 2021 Wooroloo Bushfire, Jarrad Mckercher, Eddie Van Etten, David Blake

Research Datasets

Increases in consecutive days that meteorological, climatic and biophysical variables combine to influence fire is projecting an increase in fire size and intensity. This prompts investigation into the severity of recent fires to gain a better understanding of the factors that influence fire severity. Using a highly accurate spectral index, a geospatial analysis was undertaken to identify key variables that control the variability in fire severity of the 2021 Wooroloo Bushfire. Random Forest regression and General Additive Model (GAM) were utilised to determine variable importance in modelling fire severity and to create parsimonious models. Elevation and the Soil Dryness Index …

Fungicide Data, Amber Johnson

ScholarsArchive Data

This dataset contains emergence, biomass, and fungal biomass data collected during a laboratory study examining the effects of soil fungal level and seed coating treatment on the growth of bluebunch wheatgrass (Pseudoroegneria spicata). Pathogenesis from soil and seed-borne fungus can limit success when restoring native species. Fungicides can combat fungal pathogens, but in some studies, fungicides treatments are ineffective at improving seedling emergence over untreated, control seed. These studies suggest low fungal presence due to dry conditions may be the cause of the ineffectiveness of fungicide treatments for some years and sites. This study tested if fungicide treatment …

Catfish Neurocranium 3-D Scan, Pamela Gonzalez, Jarod Johnson, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Oliver Agee Catfish Neurocranium, Charlotte R. Oliver, Kristina Agee, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 10.7 cm total length, [Catfish], collected by [Kerstetter].

Common Snook (Centropomus Undecimalis) Neurocranium, Ryan Robison, Lesley Wallace, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium length of 16.5 cm Common Snook (Centropomus undecimalis), collected from Dr. Kerstetter's Lab on 10/23 by Ryan Robison and Lesley Wallace.

Yellow Grouper (Epinephelus Awoara), Tyler Jurain, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.

Jack Crevalle Neurocranium, Rodolfo A. Heredia, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

No abstract provided.