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2015

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Articles 31 - 60 of 1393

Full-Text Articles in Electrical and Computer Engineering

Dual-Band Singly-Fed Proximity-Coupled Tip-Truncated Triangular Patch Array For Land Vehicle Mobile System, Basari Basari, Josaphat Tetuko Sri Sumantyo Dec 2015

Dual-Band Singly-Fed Proximity-Coupled Tip-Truncated Triangular Patch Array For Land Vehicle Mobile System, Basari Basari, Josaphat Tetuko Sri Sumantyo

Makara Journal of Technology

This paper proposes a dual-band left-handed circularly polarized triangular-patch array that is developed for land vehicle mobile system aimed at mobile satellite communications. The array consists of six tip-truncated triangular patches, which the first three patches are used for reception and the second three patches are used for transmission purpose. Each of three-patches has a beam pattern that can be switched in three different 120°-coverage beam in azimuth-cut plane at a minimum targeted gain at a desired elevation angle. The targeted minimum gain of the array is 5 dBic, in order for data communications with a large geostationary satellite can …


Improvement Of Quality Of Carica Papaya L. With Clove Oil As Preservative In Edible Coating Technology, Eny Kusrini, Anwar Usman, Chrispine Deksita Wisakanti, Rita Arbianti, Dedy Alharis Nasution Dec 2015

Improvement Of Quality Of Carica Papaya L. With Clove Oil As Preservative In Edible Coating Technology, Eny Kusrini, Anwar Usman, Chrispine Deksita Wisakanti, Rita Arbianti, Dedy Alharis Nasution

Makara Journal of Technology

We have studied utilization of essential clove oil, extracted from clove buds by hydrodistillation, as preservative in edible packaging technology. Preservative of essential clove oil was applied on chopped papaya fruits by using two methods, namely spray and brush. The effects of concentration of clove oil from 0.05 to 0.20% on the preservation of papaya fruits (Carica papaya L.) at room temperature (25 °C) were also evaluated. Physicochemical and in vitro microbiological activities on the papaya fruits that were stored at 25 oC and 85-90% relative humidity were investigated in details. The results indicate that the clove oil at concentration …


An Organic Mixed Ion-Electron Conductor For Power Electronics, Abdellah Malti, Jesper Edberg, Hjalmar Granberg, Zia Ullah Khan, Jens W. Andreasen, Xianjie Liu, Dan Zhao, Hao Zhang, Yulong Yao, Joseph W. Brill, Isak Engquist, Mats Fahlman, Lars Wågberg, Xavier Crispin, Magnus Berggren Dec 2015

An Organic Mixed Ion-Electron Conductor For Power Electronics, Abdellah Malti, Jesper Edberg, Hjalmar Granberg, Zia Ullah Khan, Jens W. Andreasen, Xianjie Liu, Dan Zhao, Hao Zhang, Yulong Yao, Joseph W. Brill, Isak Engquist, Mats Fahlman, Lars Wågberg, Xavier Crispin, Magnus Berggren

Physics and Astronomy Faculty Publications

A mixed ionic–electronic conductor based on nanofibrillated cellulose composited with poly(3,4-ethylene-dioxythio­phene):­poly(styrene-sulfonate) along with high boiling point solvents is demonstrated in bulky electrochemical devices. The high electronic and ionic conductivities of the resulting nanopaper are exploited in devices which exhibit record values for the charge storage capacitance (1F) in supercapacitors and transconductance (1S) in electrochemical transistors.


Broadband High Gain Siw Ring Slot Antenna, Zhi Shen, Kirti Dhwaj, Hanseung Lee, Tatsuo Itoh, Li (Lijun) Jun Jiang Dec 2015

Broadband High Gain Siw Ring Slot Antenna, Zhi Shen, Kirti Dhwaj, Hanseung Lee, Tatsuo Itoh, Li (Lijun) Jun Jiang

Electrical and Computer Engineering Faculty Research & Creative Works

The slot antenna backed by the substrate integrated waveguide (SIW) cavity usually demonstrates very narrow bandwidth. In this paper, we extend the interpretation to our original dual mode SIW ring slot antenna so that a broadband radiation property based on the TE102 mode is unveiled for the first time. Through the experimental verification, over 12% bandwidth is conveniently achieved. The realized gain reaches over 7 dB. Its broadband working principle is studied in details. Simulated and measured data are both presented to verify the proposed ideas.


Plasmonic Field Confinement For Separate Absorption-Multiplication In Ingaas Nanopillar Avalanche Photodiodes, Alan C. Farrell, Pradeep Senanayake, Chung-Hong Hung, George El-Howayek, Abhejit Rajagopal, Marc Currie, Majeed M. Hayat, Diana L. Huffaker Dec 2015

Plasmonic Field Confinement For Separate Absorption-Multiplication In Ingaas Nanopillar Avalanche Photodiodes, Alan C. Farrell, Pradeep Senanayake, Chung-Hong Hung, George El-Howayek, Abhejit Rajagopal, Marc Currie, Majeed M. Hayat, Diana L. Huffaker

Electrical and Computer Engineering Faculty Research and Publications

Avalanche photodiodes (APDs) are essential components in quantum key distribution systems and active imaging systems requiring both ultrafast response time to measure photon time of flight and high gain to detect low photon flux. The internal gain of an APD can improve system signal-to-noise ratio (SNR). Excess noise is typically kept low through the selection of material with intrinsically low excess noise, using separate-absorption-multiplication (SAM) heterostructures, or taking advantage of the dead-space effect using thin multiplication regions. In this work we demonstrate the first measurement of excess noise and gain-bandwidth product in III–V nanopillars exhibiting substantially lower excess noise factors …


Advances In Autonomous-Underwater-Vehicle Based Passive Bottom-Loss Estimation By Processing Of Marine Ambient Noise, Lanfranco Muzi Dec 2015

Advances In Autonomous-Underwater-Vehicle Based Passive Bottom-Loss Estimation By Processing Of Marine Ambient Noise, Lanfranco Muzi

Dissertations and Theses

Accurate modeling of acoustic propagation in the ocean waveguide is important to SONAR-performance prediction, and requires, particularly in shallow water environments, characterizing the bottom reflection loss with a precision that databank-based modeling cannot achieve. Recent advances in the technology of autonomous underwater vehicles (AUV) make it possible to envision a survey system for seabed characterization composed of a short array mounted on a small AUV. The bottom power reflection coefficient (and the related reflection loss) can be estimated passively by beamforming the naturally occurring marine ambient-noise acoustic field recorded by a vertical line array of hydrophones. However, the reduced array …


Design And Control Of A Bidirectional Dual Active Bridge Dc-Dc Converter To Interface Solar, Battery Storage, And Grid-Tied Inverters, Kenny George Dec 2015

Design And Control Of A Bidirectional Dual Active Bridge Dc-Dc Converter To Interface Solar, Battery Storage, And Grid-Tied Inverters, Kenny George

Electrical Engineering Undergraduate Honors Theses

In order to further reduce the size of today’s power converters, wide bandgap semiconductor technologies are being explored. These devices, such as silicon carbide (SiC), have been shown to outperform their silicon counterparts when used in high frequency switching, high temperature, and high voltage applications. These properties make them highly desirable in the bidirectional dual active bridge power converter. Being an isolated converter topology, the dual active bridge employs a transformer to provide step-up/step-down functionality and galvanic isolation for the converter. Transformers, as well as other passive components such as inductors and capacitors may be reduced in size when higher …


Eeg-Controlling Robotic Car And Alphabetic Display By Support Vector Machine For Aiding Amyotrophic Lateral Sclerosis Patients, Quang M. Le Dec 2015

Eeg-Controlling Robotic Car And Alphabetic Display By Support Vector Machine For Aiding Amyotrophic Lateral Sclerosis Patients, Quang M. Le

Electrical Engineering Undergraduate Honors Theses

This thesis presents the design and experiment of a system that can detect the human thinking such as driving directions and letters using the brainwave signals known as electroencephalogram (EEG) and a machine learning algorithm called support vector machine (SVM). This research is motivated by amyotrophic lateral sclerosis (ALS) disease which makes patients seriously lose mobility and speaking capabilities. The developed system in this thesis has three main steps. First, wearing EPOC headset from Emotiv Company, a user can record the EEG signals when he/she is thinking a direction or a letter, and also save the data in a personal …


Libsbolj 2.0: A Java Library To Support Sbol 2.0, Zhen Zhang, Tramy Nguyen, Nicholas Roehner, Goksel Misirli, Matthew Pocock, Ernst Oberortner, Meher Samineni, Zach Zundel, Jacob Beal, Kevin Clancy, Anil Wipat, Chris J. Myers Dec 2015

Libsbolj 2.0: A Java Library To Support Sbol 2.0, Zhen Zhang, Tramy Nguyen, Nicholas Roehner, Goksel Misirli, Matthew Pocock, Ernst Oberortner, Meher Samineni, Zach Zundel, Jacob Beal, Kevin Clancy, Anil Wipat, Chris J. Myers

Electrical and Computer Engineering Faculty Publications

The Synthetic Biology Open Language (SBOL) is an emerging data standard for representing synthetic biology designs. The goal of SBOL is to improve the reproducibility of these designs and their electronic exchange between researchers and/or genetic design


Energy Forecasting For Event Venues: Big Data And Prediction Accuracy, Katarina Grolinger, Alexandra L'Heureux, Miriam Am Capretz, Luke Seewald Dec 2015

Energy Forecasting For Event Venues: Big Data And Prediction Accuracy, Katarina Grolinger, Alexandra L'Heureux, Miriam Am Capretz, Luke Seewald

Electrical and Computer Engineering Publications

Advances in sensor technologies and the proliferation of smart meters have resulted in an explosion of energy-related data sets. These Big Data have created opportunities for development of new energy services and a promise of better energy management and conservation. Sensor-based energy forecasting has been researched in the context of office buildings, schools, and residential buildings. This paper investigates sensor-based forecasting in the context of event-organizing venues, which present an especially difficult scenario due to large variations in consumption caused by the hosted events. Moreover, the significance of the data set size, specifically the impact of temporal granularity, on energy …


Development, Testing And Characterization Of Electronic Skins For Robots, Ritvij Sahasrabuddhe Dec 2015

Development, Testing And Characterization Of Electronic Skins For Robots, Ritvij Sahasrabuddhe

Electrical Engineering Theses - Archive

The main purpose of this thesis is to test and characterize newly developed pressure sensors integrated into robot skin and understand their behavior for different testing parameters such as sensor and skin materials and geometry. Flexible electronic skin is meant to behave similar to human skin acting as a tactile interface with the robot environment. Before placing electronic skin onto robots, it is important to test and characterize such structures. Since the behavior of our pressure sensors embedded in robot skin was still unknown, an experimental setup has been developed in order to test and characterize the sensors and collect …


Evaluation Of Coding Tools For Screen Content In High Efficiency Video Coding, Shwetha Chandrakant Kodpadi Dec 2015

Evaluation Of Coding Tools For Screen Content In High Efficiency Video Coding, Shwetha Chandrakant Kodpadi

Electrical Engineering Theses - Archive

High Efficiency Video Coding (HEVC) [1] is the latest Video Coding format. It challenges the state-of-the-art H.264/AVC [3] Video Coding standard which is in current use in the industry by being able to reduce the bit rate by 50% and retaining the same video quality. It came into existence in the early 2012 although Joint Collaborative Team on Video Coding (JCT-VC) was formed in January 2001 to carry out developments on HEVC, and ever since then a huge range of development has been going on. On 13 April 2013 [11], HEVC standard also called H.265 was approved by ITU-T, Joint …


Distributed Algorithms For Electric Vehicle Charging, Akshay Malhotra Dec 2015

Distributed Algorithms For Electric Vehicle Charging, Akshay Malhotra

Electrical Engineering Theses - Archive

Coordinated charging of plug-in electric vehicles (PEVs) can effectively mitigate the negative effects imposed on the power distribution grid by uncoordinated charging. Simultaneously, coordinated charging algorithms can accommodate the PEV user’s needs in terms of desired state-of-charge and charging time. In this work, the problem of tracking an arbitrary power profile, by coordinated charging of PEVs, is formulated as a discrete scheduling process, while accounting for the heterogeneity in charging rates and restricting the charging to only the maximum rated power. Then, a novel distributed algorithm is proposed to coordinate the PEV charging and eliminate the need for a central …


Reducing Encoder Complexity Of Intra-Mode Decision Using Cu Early Termination Algorithm, Nishit Samirbhai Samirbhai Shah Dec 2015

Reducing Encoder Complexity Of Intra-Mode Decision Using Cu Early Termination Algorithm, Nishit Samirbhai Samirbhai Shah

Electrical Engineering Theses - Archive

In this thesis an intra prediction algorithm is proposed that terminates complete full search prediction for the CU and is replaced by CU early termination algorithm which determines the complexity of the CU block and then decision is made to further split or non-split the CU. When the CU texture is complex the CU is split into smaller sub units to find the best size and when the CU texture is flat, the CU is not divided further into sub – units. Down sampling is done first after which complexity is calculated by which a threshold value is set. This …


H.265 (Hevc) Bitstream To H.264 (Mpeg 4 Avc) Bitstream Transcoder, Deepak Hingole Dec 2015

H.265 (Hevc) Bitstream To H.264 (Mpeg 4 Avc) Bitstream Transcoder, Deepak Hingole

Electrical Engineering Theses - Archive

With every new video coding standard the general rule of thumb has been to maintain same video quality at a reduced bit rate of about 50% as compared to the previous standard. H.265 is the latest video coding standard with support for encoding videos with wide range of resolutions, starting from low resolution to beyond High Definition i.e. 4k or 8k. H.265 also known as HEVC was preceded by H.264 which is very well established and widely used standard in industry and finds its applications in broadcast, storage, multimedia telephony. Currently almost all devices including low power handheld mobile devices …


Sparse Signal Reconstruction In Linear Inverse Scattering Problem, Tanmoy Bhowmik Dec 2015

Sparse Signal Reconstruction In Linear Inverse Scattering Problem, Tanmoy Bhowmik

Electrical Engineering Theses - Archive

Proper mathematical modeling of inverse scattering problem is of utmost importance in applications such as optical imaging and microscopy, radar, acoustic, seismic and medical imaging. However, the problem is non-linear and ill-posed due to the diffusive nature of wave propagation through the scattering medium. Born and Rytov approximation are two widely used techniques to linearize the inverse scattering problem that simplifies the mathematics and modeling of wave propagation through scattering medium in special cases. The linear inverse scattering problem is still severely ill-posed and hence, in general, the solution is not stable and unique, unless a priori knowledge about the …


A High Frequency Memristor Emulator Circuit, Manu Chilukuri Dec 2015

A High Frequency Memristor Emulator Circuit, Manu Chilukuri

Electrical Engineering Theses - Archive

In this thesis, a low power, high frequency memristor emulator has been designed. The purpose of emulator circuit is to mimic the behavior of a memristor. The circuit consists of a summing amplifier, an integrator and a multiplier. The circuit has been implemented using commercial off the shelf (COTS) components in Keysight ADS simulation tool. For CMOS implementation, the emulator circuit has been designed using IBM 0.18um technology. The design of each circuit has been explained in this work. The Opamp designed achieves a gain of 89 dB, output swing of 1.584V and a bandwidth of 3.67 MHz. The circuit …


Multi-Stage Prediction Scheme For Screen Content Based On Hevc, Nagashree Mundgemane Nagaraj Dec 2015

Multi-Stage Prediction Scheme For Screen Content Based On Hevc, Nagashree Mundgemane Nagaraj

Electrical Engineering Theses - Archive

Screen content is a computer generated content which contains text, graphics and animations and the coding of such content is different from coding a photographic content. This thesis emphasizes on coding the screen content keeping the present video coding standard High Efficiency Video Coding (HEVC) as the base. An extension to HEVC to support screen content coding (SCC) is currently under development by the Joint Collaborative Team on Video Coding (JCT- VC) and the main goal of the extension is to provide improved compression performance of text, graphics and animation in addition to photographic content. This thesis focuses on a …


Reducing The Encoding Time Of Motion Estimation In Hevc Using Parallel Programming, Vasavee Vijayaraghavan Dec 2015

Reducing The Encoding Time Of Motion Estimation In Hevc Using Parallel Programming, Vasavee Vijayaraghavan

Electrical Engineering Theses - Archive

High Efficiency Video Coding (HEVC) is the current state-of-art video codec which is widely being adopted by lot of users. It has close to 50% reduction in encoding time compared to its predecessor, H.264 or AVC (Advanced Video Coding) at the cost of increased complexity. Lot of research is going towards reducing the complexity of this codec, at the same time, maintaining the visual quality that it produces and maintaining the reduced encoding time from its predecessor. As an effort to decrease the encoding time further, there can be several approaches. Parallel processing is taking a dominant role in many …


Real-Time Digital Effects Processing Using Ios, Jonah W. Clinard Dec 2015

Real-Time Digital Effects Processing Using Ios, Jonah W. Clinard

Computer Engineering

In today’s society, we are seeing incredible improvements in terms of creating smaller technological devices that behave more and more like the personal computers of yesterday. Mobile “Smart” devices, in particular, are becoming incredibly powerful not just in terms of processing power, but in the fact that they are able to provide assistance to users in their everyday lives. Application developers are now able utilize the power and size of these devices, to create and realize ideas that would have been previously viewed as impossible. This project applies the fields of digital signal processing, music, and mobile application development, to …


Electrical Characterization Of Gold And Platinum Thin Film Electrodes With Polyaniline Modified Surfaces, John Aggas Dec 2015

Electrical Characterization Of Gold And Platinum Thin Film Electrodes With Polyaniline Modified Surfaces, John Aggas

All Theses

Recent studies into soft organic electronics have burgeoned as a result of discoveries of conducting polymers such as polyaniline, polythiophene, and polypyrrole. However, in order to make these conducting polymers suitable for in vivo soft organic electronics, they must be developed so that they can be biocompatible and provide accurate sensing. Chitosan, a naturally occurring polymer structure found in exoskeletons of crustaceans, has been studied for its biocompatible properties. Composites of polyaniline (PAn), an intrinsically conductive polymer (ICP) and chitosan (Chi), a biopolymer, were developed and applied to gold and platinum Thin Film Electrode (TFE) devices. Electropolymerization and drop cast …


Phasor Measurement Unit Deployment Approach For Maximum Observability Considering Vulnerability Analysis, Jyoti Paudel Dec 2015

Phasor Measurement Unit Deployment Approach For Maximum Observability Considering Vulnerability Analysis, Jyoti Paudel

All Theses

In recent years, there has been growing interest of synchrophasor measurements like Phasor Measurement Units (PMUs) Power systems are now being gradually populated by PMU since they provide significant phasor information for the protection and control of power systems during normal and abnormal situations. There are several applications of PMUs, out of which state estimation is a widely used. To improve the robustness of state estimation, different approaches for placement of PMUs have been studied. This thesis introduces an approach for deployment the PMUs considering its vulnerability. Two different analysis have been considered to solve the problem of locating PMUs …


Scaled Synthetic Aperture Radar System Development, Ryan K. Green Dec 2015

Scaled Synthetic Aperture Radar System Development, Ryan K. Green

Master's Theses

Synthetic Aperture Radar (SAR) systems generate two dimensional images of a target area using RF energy as opposed to light waves used by cameras. When cloud cover or other optical obstructions prevent camera imaging over a target area, SAR can be substituted to generate high resolution images. Linear frequency modulated signals are transmitted and received while a moving imaging platform traverses a target area to develop high resolution images through modern digital signal processing (DSP) techniques. The motivation for this joint thesis project is to design and construct a scaled SAR system to support Cal Poly radar projects. Objectives include …


Structural Damage Assessment Using Artificial Neural Networks And Artificial Immune Systems, Arthur Q.X. Shi Dec 2015

Structural Damage Assessment Using Artificial Neural Networks And Artificial Immune Systems, Arthur Q.X. Shi

Master's Theses

Structural health monitoring (SHM) systems have been technologically advancing over the past few years. Improvements in fabrication and microelectronics allow the development of highly sophisticated sensor arrays, capable of detecting and transmitting an unprecedented amount of data. As the complexity of the hardware increases, research has been performed in developing the means to best utilize and effectively process the data. Algorithms from other computational fields are being introduced for the first time into SHM systems. Among them, the artificial neural network (ANN) and artificial immune systems (AIS) show great potential. In this thesis, features are extracted out of the acceleration …


A Lidar Based Semi-Autonomous Collision Avoidance System And The Development Of A Hardware-In-The-Loop Simulator To Aid In Algorithm Development And Human Studies, Thomas F. Stevens Dec 2015

A Lidar Based Semi-Autonomous Collision Avoidance System And The Development Of A Hardware-In-The-Loop Simulator To Aid In Algorithm Development And Human Studies, Thomas F. Stevens

Master's Theses

In this paper, the architecture and implementation of an embedded controller for a steering based semi-autonomous collision avoidance system on a 1/10th scale model is presented. In addition, the development of a 2D hardware-in-the-loop simulator with vehicle dynamics based on the bicycle model is described. The semi-autonomous collision avoidance software is fully contained onboard a single-board computer running embedded GNU/Linux. To eliminate any wired tethers that limit the system’s abilities, the driver operates the vehicle at a user-control-station through a wireless Bluetooth interface. The user-control-station is outfitted with a game-controller that provides standard steering wheel and pedal controls along …


Analyzing General-Purpose Computing Performance On Gpu, Fanfu Meng Dec 2015

Analyzing General-Purpose Computing Performance On Gpu, Fanfu Meng

Master's Theses

ABSTRACT

Analyzing General-Purpose Computing Performance on GPU

Graphic Processing Unit (GPU) has become one of the most important components in modern computer systems. GPUs have evolved from a single -purpose graphic rendering hardware to a powerful processor that is capable of handling many different kinds of computing tasks. However, GPUs don’t perform well on every application, and it takes a lot of design effort to get good performance on a GPU.

This thesis aims to investigate the relative performance of a GPU vs. CPU. Design effort is held minimum for both CPU implementations and GPU implementations. Matrix multiplication, Advance Encryption …


Design Of A New Digital Relay For Transmission Line Fault Detection, Classification And Localization Based On A New Composite Relay And Artificial Neural Network Approach, Ahmed Sabri Altaie Dec 2015

Design Of A New Digital Relay For Transmission Line Fault Detection, Classification And Localization Based On A New Composite Relay And Artificial Neural Network Approach, Ahmed Sabri Altaie

Masters Theses

This thesis focuses on new approach to detect, classify, and localize the fault in transmission line. Firstly, fault detection was carried out using the New Composite Relay (CR) which, has different characteristics and the ability to detect any type of fault including series faults. Secondly, fault classification was conducted using the Feed Forward Artificial Neural Network (FFANN). In addition, the fault classification led to the investigation of the best use of the FFANN. The data used come from MATLAB/SIMULINK three phase series compensated network. The results obtained using FFANN, were compared with the type of the fault that have been …


Estimation On Gibbs Entropy For An Ensemble, Lekhya Sai Sake Dec 2015

Estimation On Gibbs Entropy For An Ensemble, Lekhya Sai Sake

Electronic Theses, Projects, and Dissertations

In this world of growing technology, any small improvement in the present scenario would create a revolution. One of the popular revolutions in the computer science field is parallel computing. A single parallel execution is not sufficient to see its non-deterministic features, as same execution with the same data at different time would end up with a different path. In order to see how non deterministic a parallel execution can extend up to, creates the need of the ensemble of executions. This project implements a program to estimate the Gibbs Entropy for an ensemble of parallel executions. The goal is …


Signage Recognition Based Wayfinding System For The Visually Impaired, Abdullah Khalid Ahmed Dec 2015

Signage Recognition Based Wayfinding System For The Visually Impaired, Abdullah Khalid Ahmed

Masters Theses

Persons of visual impairment make up a growing segment of modern society. To cater to the special needs of these individuals, society ought to consider the design of special constructs to enable them to fulfill their daily necessities. This research proposes a new method for text extraction from indoor signage that will help persons of visual impairment maneuver in unfamiliar indoor environments, thus enhancing their independence and quality of life.

In this thesis, images are acquired through a video camera mounted on glasses of the walking person. Frames are then extracted and used in an integrated framework that applies Maximally …


A High Performance Architecture For An Exact Match Short-Read Aligner Using Burrows-Wheeler Aligner On Fpgas, Dana Abdul Qader Dec 2015

A High Performance Architecture For An Exact Match Short-Read Aligner Using Burrows-Wheeler Aligner On Fpgas, Dana Abdul Qader

Masters Theses

Due to modern DNA sequencing technologies vast amount of short DNA sequences known as short-reads is generated. Biologists need to be able to align the short-reads to a reference genome to be able to make scientific use of the data. Fast and accurate short-read aligner programs are needed to keep up with the pace at which this data is generated. Field Programmable Gate Arrays have been widely used to accelerate many data-intensive bioinformatics applications.

Burrows-Wheeler Transform has been used in the theory of string matching which has led to the development of many short-read alignment programs. This thesis presents a …