Computer Engineering Commons^™

Analyzing And Learning The Language For Different Types Of Harassment, Mohammadreza Rezvan, Saeedeh Shekarpour, Faisal Alshargi, Krishnaprasad Thirunarayan, Valerie L. Shalin, Amit P. Sheth

Publications

THIS ARTICLE USES WORDS OR LANGUAGE THAT IS CONSIDERED PROFANE, VULGAR, OR OFFENSIVE BY SOME READERS. The presence of a significant amount of harassment in user-generated content and its negative impact calls for robust automatic detection approaches. This requires the identification of different types of harassment. Earlier work has classified harassing language in terms of hurtfulness, abusiveness, sentiment, and profanity. However, to identify and understand harassment more accurately, it is essential to determine the contextual type that captures the interrelated conditions in which harassing language occurs. In this paper we introduce the notion of contextual type in harassment by distinguishing …

Knowledge Infused Learning (K-Il): Towards Deep Incorporation Of Knowledge In Deep Learning, Ugur Kursuncu, Manas Gaur, Amit Sheth

Publications

Learning the underlying patterns in data goes beyondinstance-based generalization to external knowledge repre-sented in structured graphs or networks. Deep learning thatprimarily constitutes neural computing stream in AI hasshown significant advances in probabilistically learning la-tent patterns using a multi-layered network of computationalnodes (i.e., neurons/hidden units). Structured knowledge thatunderlies symbolic computing approaches and often supportsreasoning, has also seen significant growth in recent years,in the form of broad-based (e.g., DBPedia, Yago) and do-main, industry or application specific knowledge graphs. Acommon substrate with careful integration of the two willraise opportunities to develop neuro-symbolic learning ap-proaches for AI, where conceptual and probabilistic repre-sentations are combined. …

Alone: A Dataset For Toxic Behavior Among Adolescents On Twitter, Thilini Wijesiriwardene, Hale Inan, Ugur Kursuncu, Manas Gaur, Valerie L. Shalin, Krishnaprasad Thirunarayan, Amit P. Sheth, I. Budak Arpinar

Publications

The convenience of social media has also enabled its misuse, potentially resulting in toxic behavior. Nearly 66% of internet users have observed online harassment, and 41% claim personal experience, with 18% facing severe forms of online harassment. This toxic communication has a significant impact on the well-being of young individuals, affecting mental health and, in some cases, resulting in suicide. These communications exhibit complex linguistic and contextual characteristics, making recognition of such narratives challenging. In this paper, we provide a multimodal dataset of toxic social media interactions between confirmed high school students, called ALONE (AdoLescents ON twittEr), along with descriptive …

Relational Sequential Decision Making, Kaushik Roy

Publications

Markov Decision Processes(MDPs) are the standard for sequential decision making. Comprehensive theory and methods have been developed to deal with solving MDPs in the propositional setting. Real world domains however are naturally represented using objects and relationships. To this effect, relational adaptations of algorithms to solve MDPs have been proposed in recent years. This paper presents a study of these techniques both in the model based and model free setting.

Knowledge-Infused Statistical Learning For Social Good, Kaushik Roy, Manas Gaur

Publications

Humans are able to provide symbolic knowledge in structured form for potential use by an AI system in learning human-desirable concepts. In clinical settings, for instance, prediction of patient outcomes by an AI can be guided by knowledge from patient history. This history contains concepts such as treatment information, observational and drug-related information, mental health conditions, and severity of disease/disorder. Additionally, there is also often a certain graphical structure to the knowledge among the concepts, for example, ”patient symptoms cause certain tests to be taken”, which in turn affects the prescription of medication. This type of structure between human interpretable …

Assessing The Severity Of Health States Based On Social Media Posts, Shweta Yadav, Joy Prakash Sain, Amit P. Sheth, Asif Ekbal, Sriparna Saha, Pushpak Bhattacharyya

Publications

The unprecedented growth of Internet users has resulted in an abundance of unstructured information on social media including health forums, where patients request healthrelated information or opinions from other users. Previous studies have shown that online peer support has limited effectiveness without expert intervention. Therefore, a system capable of assessing the severity of health state from the patients’ social media posts can help health professionals (HP) in prioritizing the user’s post. In this study, we inspect the efficacy of different aspects of Natural Language Understanding (NLU) to identify the severity of the user’s health state in relation to two perspectives(tasks) …

Explainable Ai Using Knowledge Graphs, Manas Gaur, Ankit Desai, Keyur Faldu, Amit Sheth

Publications

During the last decade, traditional data-driven deep learning (DL) has shown remarkable success in essential natural language processing tasks, such as relation extraction. Yet, challenges remain in developing artificial intelligence (AI) methods in real-world cases that require explainability through human interpretable and traceable outcomes. The scarcity of labeled data for downstream supervised tasks and entangled embeddings produced as an outcome of self-supervised pre-training objectives also hinders interpretability and explainability. Additionally, data labeling in multiple unstructured domains, particularly healthcare and education, is computationally expensive as it requires a pool of human expertise. Consider Education Technology, where AI systems fall along a …

A Novel And Inexpensive Solution To Build Autonomous Surface Vehicles Capable Of Negotiating Highly Disturbed Environments, Jason Moulton

Theses and Dissertations

This dissertation has four main contributions. The first contribution is the design and build of a fleet of long-range, medium-duration deployable autonomous surface vehicles (ASV). The second is the development, implementation, and testing of inex-pensive sensors to accurately measure wind, current, and depth environmental vari- ables. The third leverages the first two contributions, and is modeling the effects of environmental variables on an ASV, finally leading to the development of a dynamic controller enabling deployment in more uncertain conditions.

The motivation for designing and building a new ASV comes from the lack of availability of a flexible and modular platform …

Development Of A National-Scale Big Data Analytics Pipeline To Study The Potential Impacts Of Flooding On Critical Infrastructures And Communities, Nattapon Donratanapat

Theses and Dissertations

With the rapid development of the Internet of Things (IoT) and Big data infrastructure, crowdsourcing techniques have emerged to facilitate data processing and problem solving particularly for flood emergences purposes. A Flood Analytics Information System (FAIS) has been developed as a Python Web application to gather Big data from multiple servers and analyze flooding impacts during historical and real-time events. The application is smartly designed to integrate crowd intelligence, machine learning (ML), and natural language processing of tweets to provide flood warning with the aim to improve situational awareness for flood risk management and decision making. FAIS allows the user …

Fkrr-Mvsf: A Fuzzy Kernel Ridge Regression Model For Identifying Dna-Binding Proteins By Multi-View Sequence Features Via Chou's Five-Step Rule, Yi Zou, Yije Ding, Jijun Tang, Fei Guo, Li Peng

Faculty Publications

DNA-binding proteins play an important role in cell metabolism. In biological laboratories, the detection methods of DNA-binding proteins includes yeast one-hybrid methods, bacterial singles and X-ray crystallography methods and others, but these methods involve a lot of labor, material and time. In recent years, many computation-based approachs have been proposed to detect DNA-binding proteins. In this paper, a machine learning-based method, which is called the Fuzzy Kernel Ridge Regression model based on Multi-View Sequence Features (FKRR-MVSF), is proposed to identifying DNA-binding proteins. First of all, multi-view sequence features are extracted from protein sequences. Next, a Multiple Kernel Learning (MKL) algorithm …

Limited Data Rolling Bearing Fault Diagnosis With Few-Shot Learning, Ansi Zhang, Shaobo Li, Yuxin Cui, Wanli Yang, Rongzhi Dong, Jianjun Hu

Faculty Publications

This paper focuses on bearing fault diagnosis with limited training data. A major challenge in fault diagnosis is the infeasibility of obtaining sufficient training samples for every fault type under all working conditions. Recently deep learning based fault diagnosis methods have achieved promising results. However, most of these methods require large amount of training data. In this study, we propose a deep neural network based few-shot learning approach for rolling bearing fault diagnosis with limited data. Our model is based on the siamese neural network, which learns by exploiting sample pairs of the same or different categories. Experimental results over …

Personalized Product Evaluation Based On Gra-Topsis And Kansei Engineering, Huafeng Quan, Shaobo Li, Hongjing Wei, Jianjun Hu

Faculty Publications

With the improvement of human living standards, users’ requirements have changed from function to emotion. Helping users pick out the most suitable product based on their subjective requirements is of great importance for enterprises. This paper proposes a Kansei engineering-based grey relational analysis and techniques for order preference by similarity to ideal solution (KE-GAR-TOPSIS) method to make a subjective user personalized ranking of alternative products. The KE-GRA-TOPSIS method integrates five methods, including Kansei Engineering (KE), analytic hierarchy process (AHP), entropy, game theory, and grey relational analysis-TOPSIS (GRA-TOPSIS). First, an evaluation system is established by KE and AHP. Second, we define …

Using Big Data Analytics To Improve Hiv Medical Care Utilisation In South Carolina: A Study Protocol, Bankole Olatosi, Jiajia Zhang, Sharon Weissman, Jianjun Hu, Mohammad Rifat Haider, Xiaoming Li

Faculty Publications

Introduction Linkage and retention in HIV medical care remains problematic in the USA. Extensive health utilisation data collection through electronic health records (EHR) and claims data represent new opportunities for scientific discovery. Big data science (BDS) is a powerful tool for investigating HIV care utilisation patterns. The South Carolina (SC) office of Revenue and Fiscal Affairs (RFA) data warehouse captures individual-level longitudinal health utilisation data for persons living with HIV (PLWH). The data warehouse includes EHR, claims and data from private institutions, housing, prisons, mental health, Medicare, Medicaid, State Health Plan and the department of health and human services. The …

Deep Autoencoder Neural Networks For Short-Term Traffic Congestion Prediction Of Transportation Networks, Sen Zhang, Yong Yao, Jie Hu, Yong Zhao, Shaobo Li, Jianjun Hu

Faculty Publications

Traffic congestion prediction is critical for implementing intelligent transportation systems for improving the efficiency and capacity of transportation networks. However, despite its importance, traffic congestion prediction is severely less investigated compared to traffic flow prediction, which is partially due to the severe lack of large-scale high-quality traffic congestion data and advanced algorithms. This paper proposes an accessible and general workflow to acquire large-scale traffic congestion data and to create traffic congestion datasets based on image analysis. With this workflow we create a dataset named Seattle Area Traffic Congestion Status (SATCS) based on traffic congestion map snapshots from a publicly available …

Multimodal Emotion Classification, Anurag Illendula, Amit Sheth

Publications

Most NLP and Computer Vision tasks are limited to scarcity of labelled data. In social media emotion classification and other related tasks, hashtags have been used as indicators to label data. With the rapid increase in emoji usage of social media, emojis are used as an additional feature for major social NLP tasks. However, this is less explored in case of multimedia posts on social media where posts are composed of both image and text. At the same time, w.e have seen a surge in the interest to incorporate domain knowledge to improve machine understanding of text. In this paper, …

Knowledge-Aware Assessment Of Severity Of Suicide Risk For Early Intervention, Manas Gaur, Amanuel Alambo, Joy Prakash Sain, Ugur Kursuncu, Krishnaprasad Thirunarayan, Ramakanth Kavuluru, Amit Sheth, Randon S. Welton, Jyotishman Pathak

Publications

Mental health illness such as depression is a significant risk factor for suicide ideation, behaviors, and attempts. A report by Substance Abuse and Mental Health Services Administration (SAMHSA) shows that 80% of the patients suffering from Borderline Personality Disorder (BPD) have suicidal behavior, 5-10% of whom commit suicide. While multiple initiatives have been developed and implemented for suicide prevention, a key challenge has been the social stigma associated with mental disorders, which deters patients from seeking help or sharing their experiences directly with others including clinicians. This is particularly true for teenagers and younger adults where suicide is the second …

Lightcpg: A Multi-View Cpg Sites Detection On Single-Cell Whole Genome Sequence Data, Limin Jiang, Chongqing Wang, Jijun Tang, Fei Gu

Faculty Publications

Background DNA methylation plays an important role in multiple biological processes that are closely related to human health. The study of DNA methylation can provide an insight into the mechanism behind human health and can also have a positive effect on the assessment of human health status. However, the available sequencing technology is limited by incomplete CpG coverage. Therefore, it is crucial to discover an efficient and convenient method capable of distinguishing between the states of CpG sites. Previous studies focused on identifying methylation states of the CpG sites in single cell, which only evaluated sequence information or structural information. …

Convolutional Neural Networks For Crystal Material Property Prediction Using Hybrid Orbital-Field Matrix And Magpie Descriptors, Zhuo Cao, Yabo Dan, Zheng Xiong, Chengcheng Niu, Xiang Li, Songrong Qian, Jianjun Hu

Faculty Publications

Computational prediction of crystal materials properties can help to do large-scale in-silicon screening. Recent studies of material informatics have focused on expert design of multi-dimensional interpretable material descriptors/features. However, successes of deep learning such as Convolutional Neural Networks (CNN) in image recognition and speech recognition have demonstrated their automated feature extraction capability to effectively capture the characteristics of the data and achieve superior prediction performance. Here, we propose CNN-OFM-Magpie, a CNN model with OFM (Orbital-field Matrix) and Magpie descriptors to predict the formation energy of 4030 crystal material by exploiting the complementarity of two-dimensional OFM features and Magpie features. Experiments …

Bridgr: An Ios Application For Organizing And Discussing Long-Distance Carpooling, Harrison Engoren, Erik Zorn

Senior Theses

Bridgr is an iOS application that facilitates long distance carpooling. This application allows drivers to post destinations on an interactable map so that they can be linked with students that need a ride to a location within close proximity of the posted destination. The riders and driver are linked in a common chat board where they can discuss ride details among themselves. The goal of Bridgr is to allow drivers to utilize extra space in their car in turn for fellowship and/or gas money.

High-Performing Pgm-Free Aemfc Cathodes From Carbon-Supported Cobalt Ferrite Nanoparticles, Xiong Peng, Varchaswal Kashyap, Benjamin Ng, Sreekumar Kurungot, Lianqin Wang, John R. Varcoe, Mustain E William

Faculty Publications

Efficient and durable non-precious metal electrocatalysts for the oxygen reduction reaction (ORR) are highly desirable for several electrochemical devices, including anion exchange membrane fuel cells (AEMFCs). Here, cobalt ferrite (CF) nanoparticles supported on Vulcan XC-72 carbon (CF-VC) were created through a facile, scalable solvothermal method. The nano-sized CF particles were spherical with a narrow particle size distribution. The CF-VC catalyst showed good ORR activity, possessing a half-wave potential of 0.71 V. Although the intrinsic activity of the CF-VC catalyst was not as high as some other platinum group metal (PGM)-free catalysts in the literature, where this catalyst really shined was …

Diagnosis Of Brain Diseases Via Multi-Scale Time-Series Model, Zehua Zhang, Junhai Xu, Jijun Tang, Quan Zou, Fei Guo

Faculty Publications

The functional magnetic resonance imaging (fMRI) data and brain network analysis have been widely applied to automated diagnosis of neural diseases or brain diseases. The fMRI time series data not only contains specific numerical information, but also involves rich dynamic temporal information, those previous graph theory approaches focus on local topology structure and lose contextual information and global fluctuation information. Here, we propose a novel multi-scale functional connectivity for identifying the brain disease via fMRI data. We calculate the discrete probability distribution of co-activity between different brain regions with various intervals. Also, we consider nonsynchronous information under different time dimensions, …

Application Of The Second-Order Comprehensive Adjoint Sensitivity Analysis Methodology To Compute First- And Second-Order Sensitivities Of Flux Functionals In A Multiplying System With Source, Dan Gabriel Cacuci

Faculty Publications

This work presents an application of the Second-Order Adjoint Sensitivity Analysis Methodology (2nd-ASAM) to the neutron transport Boltzmann equation that models a multiplying subcritical system comprising a nonfission neutron source to compute efficiently and exactly all of the first- and second-order functional derivatives (sensitivities) of a detector’s response to all of the model’s parameters, including isotopic number densities, microscopic cross sections, fission spectrum, sources, and detector response function. As indicated by the general theoretical considerations underlying the 2nd-ASAM, the number of computations required to obtain the first and second orders increases linearly in augmented Hilbert spaces as opposed to increasing …

Discovering Cancer Subtypes Via An Accurate Fusion Strategy On Multiple Profile Data, Limin Jiang, Yongkang Xiao, Yijie Ding, Jijun Tang, Fei Guo

Faculty Publications

Discovering cancer subtypes is useful for guiding clinical treatment of multiple cancers. Progressive profile technologies for tissue have accumulated diverse types of data. Based on these types of expression data, various computational methods have been proposed to predict cancer subtypes. It is crucial to study how to better integrate these multiple profiles of data. In this paper, we collect multiple profiles of data for five cancers on The Cancer Genome Atlas (TCGA). Then, we construct three similarity kernels for all patients of the same cancer by gene expression, miRNA expression and isoform expression data. We also propose a novel unsupervised …

Multivariate Information Fusion With Fast Kernel Learning To Kernel Ridge Regression In Predicting Lncrna-Protein Interactions, Cong Shen, Yijie Ding, Jijun Tang, Fei Guo

Faculty Publications

Long non-coding RNAs (lncRNAs) constitute a large class of transcribed RNA molecules. They have a characteristic length of more than 200 nucleotides which do not encode proteins. They play an important role in regulating gene expression by interacting with the homologous RNA-binding proteins. Due to the laborious and time-consuming nature of wet experimental methods, more researchers should pay great attention to computational approaches for the prediction of lncRNA-protein interaction (LPI). An in-depth literature review in the state-of-the-art in silico investigations, leads to the conclusion that there is still room for improving the accuracy and velocity. This paper propose a novel …

Identifying Key Topics Bearing Negative Sentiment On Twitter: Insights Concerning The 2015-2016 Zika Epidemic, Ravali Mamidi, Michele Miller, Tanvi Banerjee, William Romine, Amit Sheth

Publications

Background To understand the public sentiment regarding the Zika virus, social media can be leveraged to understand how positive, negative, and neutral sentiments are expressed in society. Specifically, understanding the characteristics of negative sentiment could help inform federal disease control agencies’ efforts to disseminate relevant information to the public about Zika-related issues.

Objective The purpose of this study was to analyze the public sentiment concerning Zika using posts on Twitter and determine the qualitative characteristics of positive, negative, and neutral sentiments expressed.

Methods Machine learning techniques and algorithms were used to analyze the sentiment of tweets concerning Zika. A supervised …

Determination Of Personalized Asthma Triggers From Multimodal Sensing And A Mobile App: Observational Study, Revathy Venkataramanan, Krishnaprasad Thirunarayan, Utkarshani Jaimini, Dipesh Kadariya, Hong Yung Yip, Maninder Kalra, Amit Sheth

Publications

Background: Asthma is a chronic pulmonary disease with multiple triggers. It can be managed by strict adherence to an asthma care plan and by avoiding these triggers. Clinicians cannot continuously monitor their patients’ environment and their adherence to an asthma care plan, which poses a significant challenge for asthma management.

Objective: In this study, pediatric patients were continuously monitored using low-cost sensors to collect asthma-relevant information. The objective of this study was to assess whether kHealth kit, which contains low-cost sensors, can identify personalized triggers and provide actionable insights to clinicians for the development of a tailored asthma care plan. …

“How Is My Child’S Asthma?” Digital Phenotype And Actionable Insights For Pediatric Asthma, Utkarshani Jaimini, Krishnaprasad Thirunarayan, Maninder Kalra, Revathy Venkataramanan, Dipesh Kadariya, Amit Sheth

Publications

Background: In the traditional asthma management protocol, a child meets with a clinician infrequently, once in 3 to 6 months, and is assessed using the Asthma Control Test questionnaire. This information is inadequate for timely determination of asthma control, compliance, precise diagnosis of the cause, and assessing the effectiveness of the treatment plan. The continuous monitoring and improved tracking of the child’s symptoms, activities, sleep, and treatment adherence can allow precise determination of asthma triggers and a reliable assessment of medication compliance and effectiveness. Digital phenotyping refers to moment-by-moment quantification of the individual-level human phenotype in situ using data from …

Personalized Health Knowledge Graph, Amelie Gyrard, Manas Gaur, Saeedeh Shekarpour, Krishnaprasad Thirunarayan, Amit Sheth

Publications

Our current health applications do not adequately take into account contextual and personalized knowledge about patients. In order to design “Personalized Coach for Healthcare” applications to manage chronic diseases, there is a need to create a Personalized Healthcare Knowledge Graph (PHKG) that takes into consideration a patient’s health condition (personalized knowledge) and enriches that with contextualized knowledge from environmental sensors and Web of Data (e.g., symptoms and treatments for diseases). To develop PHKG, aggregating knowledge from various heterogeneous sources such as the Internet of Things (IoT) devices, clinical notes, and Electronic Medical Records (EMRs) is necessary. In this paper, we …

What Do You Have That Others Don't?: Succeeding In Academia Or Industry, Amit Sheth

Publications

No abstract provided.

Exploring Machine Learning Techniques To Improve Peptide Identification, Fawad Kirmani

Theses and Dissertations

The goal of this work is to improve proteotypic peptide prediction with lower pro- cessing time and better efficiency. Proteotypic peptides are the peptides in protein sequence that can be confidently observed by mass-spectrometry based proteomics. One of the widely used method for identifying peptides is tandem mass spectrometry (MS/MS). The peptides that need to be identified are compared with the accurate mass and elution time (AMT) tag database. The AMT tag database helps in reducing the processing time and increases the accuracy of the identified peptides. Prediction of proteotypic peptides has seen a rapid improvement in recent years for …