Biomedical Engineering and Bioengineering Commons^™

Optimization Of A Novel Nipam-Based Thermoresponsive Copolymer For Intramuscular Injection As A Myoblast Delivery Vehicle To Combat Peripheral Artery Occlusive Disease, Quentin R. Klueter

Master's Theses

There is a need for a minimally invasive delivery method to enable cell therapies to combat peripheral artery occlusive disease (PAOD) in end stage patients. Myoblasts show promise as a cell mediated therapy but warrant an improved delivery method to increase cell retention in the region of interest because of their adherent nature, relative to previously used BM-MNC’s that are non-adherent. Contemporary issues with achieving successful cell therapies of vasculature can be mainly characterized by the lack of clinical translation from promising animal studies and absence of cell delivery scaffolding. Naturally, polymers have been widely experimented with as grafts to …

Impact Of Primary Myoblasts On Macrophage Polarization In-Vitro, Olivia Welch

Master's Theses

Peripheral artery disease (PAD) is characterized by the development of atherosclerotic plaques on arterial walls, leading to the narrowing of blood vessels, resulting in ischemia in the downstream tissue. In the United States, 12% of the adult population is affected by PAD and its related symptoms. Current surgical revascularization techniques can be effective in part of the patient population, but there is a need for other options. Alternatively, collateral blood vessels, or natural bypass arteries, enlarge to increase blood flow to the ischemic tissue in a process called arteriogenesis, which has been studied as a therapeutic option. Cell-based therapies, such …

Bimodal Particle Distributions With Increased Thermal Conductivity For Solid Particles As Heat Transfer Media And Storage Materials, Chase E. Christen, Jesús Gómez-Hernández, Todd P. Otanicar

Mechanical and Biomedical Engineering Faculty Publications and Presentations

Solid particles are being considered in several high temperature thermal energy storage systems and as heat transfer media in a variety of advanced power generation systems, particularly in concentrated solar power plants. The downside of such an approach is the low overall heat transfer coefficients caused by the inherently low thermal conductivity values of the low-cost solid media when coupled to heat exchanger for the power cycle working fluid. Choosing the right particle size distribution, emittance, and material of the solid media can all make a substantial difference in packed bed thermal conductivity. Current research though exclusively focuses on continuous …

Youth Pitching Kinematics: Associations With Body Overweight Parameters, Christina K. Fong

Master's Theses

The objective of this study was to investigate associations between injury-related kinematic parameters and overweight measures for youth baseball pitchers. The injury-related kinematic parameters considered were measurements 1) at foot contact: stride length, front foot position, shoulder external rotation, shoulder abduction, and elbow flexion; 2) between FC and ball release: peak knee extension; and 3) at BR: shoulder abduction. Data from three separate collection sites examined pitching mechanics of 18 10- to 11-year-old pitchers, 11 14- to 16-year-old pitchers, and 104 16- to 18-year-old pitchers Linear regression analyses were performed to determine significant correlations between kinematic parameters and body mass …

Bone And Cartilage Compression Simulator, Karoline M. Wucherer, Benjamin A. Parmentier, Thomasina E. Hinkle

Biomedical Engineering

A device was developed that delivers mechanical loads to bone and soft tissue samples under physiological conditions to aid in the research of tissue engineering bone and cartilage. To begin the design process, a Network Diagram and Gantt Chart were produced to create a general timeline for the project to follow. This allowed us to measure our progress and determine what effects (if any) delays could have on our project.

Gradient And Pressure Recovery Of A Self-Expandable Transcatheter Aortic Valve Depends On Ascending Aorta Size: In Vitro Study, Milad Samaee, Hoda Hatoum, Michael Biersmith, Breandan Yeats, Shelley C. Gooden, Vinod H. Thourani, Rebecca T. Hahn, Scott Lilly, Ajit Yoganathan, Lakshmi Prasad Dasi

Michigan Tech Publications, Part 1

Objective: In this study we aimed to understand the role of interaction of the Medtronic Evolut R transcatheter aortic valve with the ascending aorta (AA) by evaluating the performance of the valve and the pressure recovery in different AA diameters with the same aortic annulus size. Methods: A 26-mm Medtronic Evolut R valve was tested using a left heart simulator in aortic root models of different AA diameter (D): small (D = 23 mm), medium (D = 28 mm), and large (D = 34 mm) under physiological conditions. Measurements of pressure from upstream to downstream of the valve were performed …

Eeg And Fmri Coupling And Decoupling Based On Joint Independent Component Analysis (Jica), Nicholas Heugel, Scott A. Beardsley, Einat Liebenthal

Biomedical Engineering Faculty Research and Publications

Background

Meaningful integration of functional magnetic resonance imaging (fMRI) and electroencephalography (EEG) requires knowing whether these measurements reflect the activity of the same neural sources, i.e., estimating the degree of coupling and decoupling between the neuroimaging modalities.

New method

This paper proposes a method to quantify the coupling and decoupling of fMRI and EEG signals based on the mixing matrix produced by joint independent component analysis (jICA). The method is termed fMRI/EEG-jICA.

Results

fMRI and EEG acquired during a syllable detection task with variable syllable presentation rates (0.25–3 Hz) were separated with jICA into two spatiotemporally distinct components, a primary …

Live Cell Imaging Gas Control, Elsa M. Bean, Brady C. Berg, Abby A. Jens

Biomedical Engineering

The following document outlines the entire process for designing and manufacturing a Live Cell Imaging Gas Control subsystem in tandem with the Heated Stage subsystem to make a CO₂ and temperature-controlled chamber for use with the Olympus IX73P2F Microscope. It highlights the current literature and patents surrounding live cell imaging and touches on the existing live cell imaging setups currently being used by other entities. Following this, it defines the scope of the project, key customer requirements, and engineering specifications to ensure the design meets all the needs of its users. This document includes project planning steps to establish …

Live Cell Imaging Heated Stage, Kerri Byrne, Anna Frauenheim, Simon Park

Biomedical Engineering

Live cell imaging is a method used by scientists to obtain a better understanding of tissue and cell functions through the study and imaging of cellular dynamics, however it is often detrimental to cell cultures due to effects of changing environment on dynamic cellular events. In order to combat the effects of a changing environment, our team has designed, manufactured, and tested an incubation chamber that will control the heat and pH environment that these cells are experiencing throughout the imaging process. This project is sponsored by the BMED microscopy core group to be used with the Olympus IX73P2F inverted …

Minivette Integrated Sample Prep Funnel For Cepheid Cartridges, Hanna N. Blumer, Sophia Arias, Camille Porciuncula, Ben Runkle

Biomedical Engineering

This report covers the redesign of the Sample Prep Funnel for Cepheid’s engineering team. The Sample Prep Funnel, responsible for relaying liquid from the sample collection device to the testing cartridge, experiences fluid loss that causes invalid test results. Our group's task was to redesign this funnel to minimize fluid loss and, overall, increase efficiency and effectiveness.

Pickleball Paddle For Minimizing Elbow/Shoulder Joint Forces, Kaley Sapper, Nick Rodgers, Claire Steines

Biomedical Engineering

The goal of this project was to design a pickleball paddle to prevent overuse injuries. This was accomplished through a design that minimizes joint forces experienced by the player during backhand strokes.

Formulation And Processing Of Dual Functional Adsorbent/Catalyst Structured Monoliths Using An Additively Manufactured Contactor For Direct Capture/Conversion Of Co2 With Cogeneration Of Ethylene, Shane Lawson, Khaled Baamran, Kyle Newport, Fateme Rezaei, Ali A. Rownaghi

Chemical and Biochemical Engineering Faculty Research & Creative Works

Utilizing CO₂ as a mild oxidant for oxidative dehydrogenation of ethane (ODHE) is an attractive way of recycling this greenhouse contaminant. Typically, CO₂ capture and conversion processes are performed in separate beds, however, combining these processes into one bed incurs advantages of lower thermal gradient and reduced energy costs. This study formulated the first generation of structured dual-functional materials (DFMs) by directly 3D printing metal-oxide-CaO/ZSM-5 inks into monolithic contactors. Specifically, we 3D-printed monoliths with V, Ga, Ni, or Ti dopants to perform metal screening and determine which metal generates the best structured DFM for combined CO₂ capture …

Cbct In Clinical Practice, Tarunjeet Pabla Bds, Dmd, Ms, Dip. Abomr, Hugo C. Campos Dds, Dmd, Mds, Dip. Abomr, Aruna Ramesh Bds, Dmd, Ms, Dip. Abomr

The Journal of the Michigan Dental Association

This feature explores the integration of Cone Beam Computed Tomography (CBCT) into dental practice, offering guidelines for best practices. Introduced in 2001, CBCT revolutionized dental radiography, impacting various clinical areas. The article emphasizes the need for clinicians to comprehend CBCT technology, its benefits, and potential risks. It delves into CBCT imaging considerations, technical parameters (Field of View, Voxel Size, Spatial and Contrast Resolution), image viewing, artifacts, machine calibration, and service. Addressing radiation dose, risks, and protection, the article outlines decision-making for 2D vs. 3D imaging. It underscores the responsibility of interpreting CBCT images, legal considerations, return on investment, and the …

Feverdots, Kameryn Laureano, Heidi Silk, Rita Grigorian

Biomedical Engineering

FeverDots are wearable temperature sensitive stickers that change color from black to pink at 99°F when placed on the temple or forehead. The objective of this project was to develop an efficient manufacturing method for FeverDots, and manufacture a device along with it. To create the FeverDots manufacturing device, the full design process was executed. The team went through a thorough ideation phase before ultimately defining and specifying the scope of the project.

The key customer requirements of this device include that it is lightweight, portable, durable, simple to assemble, easy to use, and able to generate uniform ink and …

Astm Test Fixture For Spinal Screws, Sarah K. Pickering, Matthew W. Rowen, Kaajal N. Khanna, Thomas A. Sunding

Biomedical Engineering

This document is an overview report of the Cal Poly Senior Project ASTM Test Fixture for SeaSpine orthopedic bone screws. The main application of orthopedic screws is to fasten implants directly to the bone structure, enhancing structural integrity. Testing for breaking angle, insertion torque, removal torque, axial pullout strength, and self-tapping force as specified in the ASTM F543 Annexes provides the FDA with vital screw mechanics and ensures manufacturing uniformity. The test system is comprised of custom and off the shelf components allowing for interchangeability, in case of part failure, and a low overall cost. It is mechanically capable of …

Targeting Hif-2Α In The Tumor Microenvironment: Redefining The Role Of Hif-2Α For Solid Cancer Therapy., Leah Davis, Matthias Recktenwald, Evan Hutt, Schuyler Fuller, Madison Briggs, Arnav Goel, Nichole Daringer

Henry M. Rowan College of Engineering Departmental Research

Inadequate oxygen supply, or hypoxia, is characteristic of the tumor microenvironment and correlates with poor prognosis and therapeutic resistance. Hypoxia leads to the activation of the hypoxia-inducible factor (HIF) signaling pathway and stabilization of the HIF-α subunit, driving tumor progression. The homologous alpha subunits, HIF-1α and HIF-2α, are responsible for mediating the transcription of a multitude of critical proteins that control proliferation, angiogenic signaling, metastasis, and other oncogenic factors, both differentially and sequentially regulating the hypoxic response. Post-translational modifications of HIF play a central role in its behavior as a mediator of transcription, as well as the temporal transition from …

Advancing Ubiquitous Collaboration For Telehealth - A Framework To Evaluate Technology-Mediated Collaborative Workflow For Telehealth, Hypertension Exam Workflow Study, Christopher Bondy Ph.D., Linlin Chen Ph.D, Pamela Grover Md, Pengcheng Shi Ph.D

Articles

Healthcare systems are under siege globally regarding technology adoption; the recent pandemic has only magnified the issues. Providers and patients alike look to new enabling technologies to establish real-time connectivity and capability for a growing range of remote telehealth solutions. The migration to new technology is not as seamless as clinicians and patients would like since the new workflows pose new responsibilities and barriers to adoption across the telehealth ecosystem. Technology-mediated workflows (integrated software and personal medical devices) are increasingly important in patient-centered healthcare; software-intense systems will become integral in prescribed treatment plans [1]. My research explored the path to …

Novel Stimuli-Responsive Pectin-Pvp-Functionalized Clay Based Smart Hydrogels For Drug Delivery And Controlled Release Application, Shabnam Rehmat, Nayab Batool Rizvi, Saba Urooge Khan, Abdul Ghaffar, Atif Islam, Rafi Ullah Khan, Azra Mehmood, Hira Butt, Muhammad Rizwan

Michigan Tech Publications, Part 1

Stimuli-responsive drug delivery systems are urgently required for injectable site-specific delivery and release of drugs in a controlled manner. For this purpose, we developed novel pH-sensitive, biodegradable, and antimicrobial hydrogels from bio-macromolecule pectin, polyvinylpyrrolidone (PVP), 3-aminopropyl (diethoxy)methyl silane (3-APDEMS), and sepiolite clay via blending and solution casting technique. The purified sepiolite (40 um) was functionalized with 3-APDEMS crosslinker (ex-situ modification) followed by hydrogels fabrication. FTIR and SEM confirmed crosslinked structural integrity and rod-like morphology of hydrogels respectively. The swelling properties of hydrogels could be controlled by varying the concentration of modified clay in pectin/PVP blends. Moreover, the decrease in pH …

Decellularized Articular Cartilage Microgels As Microcarriers For Expansion Of Mesenchymal Stem Cells, Esmaiel Jabbari, Azadeh Sepahvandi

Faculty Publications

Conventional microcarriers used for expansion of human mesenchymal stem cells (hMSCs) require detachment and separation of the cells from the carrier prior to use in clinical applications for regeneration of articular cartilage, and the carrier can cause undesirable phenotypic changes in the expanded cells. This work describes a novel approach to expand hMSCs on biomimetic carriers based on adult or fetal decellularized bovine articular cartilage that supports tissue regeneration without the need to detach the expanded cells from the carrier. In this approach, the fetal or adult bovine articular cartilage was minced, decellularized, freeze-dried, ground, and sieved to produce articular …

An Ensemble Approach For Patient Prognosis Of Head And Neck Tumor Using Multimodal Data, Numan Saeed, Roba Al Majzoub, Ikboljon Sobirov, Mohammad Yaqub

Computer Vision Faculty Publications

Accurate prognosis of a tumor can help doctors provide a proper course of treatment and, therefore, save the lives of many. Tradi-tional machine learning algorithms have been eminently useful in crafting prognostic models in the last few decades. Recently, deep learning algorithms have shown significant improvement when developing diag-nosis and prognosis solutions to different healthcare problems. However, most of these solutions rely solely on either imaging or clinical data. Utilizing patient tabular data such as demographics and patient med-ical history alongside imaging data in a multimodal approach to solve a prognosis task has started to gain more interest recently and …

Deep-Precognitive Diagnosis: Preventing Future Pandemics By Novel Disease Detection With Biologically-Inspired Conv-Fuzzy Network, Aviral Chharia, Rahul Upadhyay, Vinay Kumar, Chao Cheng, Jing Zhang, Tianyang Wang, Min Xu

Computer Vision Faculty Publications

Deep learning-based Computer-Aided Diagnosis has gained immense attention in recent years due to its capability to enhance diagnostic performance and elucidate complex clinical tasks. However, conventional supervised deep learning models are incapable of recognizing novel diseases that do not exist in the training dataset. Automated early-stage detection of novel infectious diseases can be vital in controlling their rapid spread. Moreover, the development of a conventional CAD model is only possible after disease outbreaks and datasets become available for training (viz. COVID-19 outbreak). Since novel diseases are unknown and cannot be included in training data, it is challenging to recognize them …

Auto-Ethnographic Reflections: Lessons From Leading A Stem Initiative For Girls In School While We Ourselves Were In School, Kayli Heather Battel, Kritin Mandala, Sreyoshi Bhaduri, Natalie Anna Foster, Lilianny Virguez, Lissa Erickson, Krishna Pakala

Mechanical and Biomedical Engineering Faculty Publications and Presentations

In this paper, we use an auto-ethnographic approach to describe first-hand the reflections and learnings from leading an organization to help school children, especially girls, familiarize themselves with STEM and Cyber Security. The primary authors and ethnographers are founders of STEM initiatives for young learners. The primary author is a recent high school graduate who has taken up an engineering field, and two other contributing authors are high-schoolers currently leading these initiatives. With help from the three engineering educators on our authorship team, we use our individual self-narratives to develop a set of recommendations for other young engineering educators across …

Opportunities From Disruption: How Lifelong Learning Helped Create More Connected Classrooms, Krishna Pakala, Sreyoshi Bhaduri

Mechanical and Biomedical Engineering Faculty Publications and Presentations

The coronavirus pandemic has led to instructors worldwide seeking ways to engage students better through virtual platforms. As the world interacts online, more than ever before, this paper reflects on an educator’s experience with the virtual teaching and learning spaces pre and during the ongoing pandemic. Autoethnography is a research methodology that analyzes a phenomenon through the use of self-narratives, which would otherwise remain private or buried. This paper uses an autoethnographic approach to describe first-hand. the experiences and learnings of an educator at a Western US Public University. This paper describes how first as an international student, a first …

Biomechanical Evaluation Of Recurrent Dissociation Of Modular Humeral Prostheses, Daniel B. Luckenbill, Mike F. Iossi, Alyssa M. George Whitney, Danielle Miller, Lynn A. Crosby, Tarun Goswami

Biomedical, Industrial & Human Factors Engineering Faculty Publications

The purpose of the study was to evaluate the force and torque required to dissociate a humeral head from the unimplanted modular total shoulder replacement system from different manufacturers and to determine if load and torque to dissociation are reduced in the presence of bodily fluids. Impingement, taper contamination, lack of compressive forces, and interference of taper fixation by the proximal humerus have all been reported as possible causes for dissociation. Experimental values determined in this research were compared with literature estimates of dissociation force of the humeral head under various conditions to gain more understanding of the causes of …

The Low Abundance Of Cpg In The Sars-Cov-2 Genome Is Not An Evolutionarily Signature Of Zap, Ali Afrasiabi, Hamid Alinejad-Rokny, Azad Khosh, Mostafa Rahnama, Nigel Lovell, Zhenming Xu, Diako Ebrahimi

Plant Pathology Faculty Publications

The zinc finger antiviral protein (ZAP) is known to restrict viral replication by binding to the CpG rich regions of viral RNA, and subsequently inducing viral RNA degradation. This enzyme has recently been shown to be capable of restricting SARS-CoV-2. These data have led to the hypothesis that the low abundance of CpG in the SARS-CoV-2 genome is due to an evolutionary pressure exerted by the host ZAP. To investigate this hypothesis, we performed a detailed analysis of many coronavirus sequences and ZAP RNA binding preference data. Our analyses showed neither evidence for an evolutionary pressure acting specifically on CpG …

Bladder Tumor In A Young Leukemic Patient Cured By Chemotherapy: A Case Report, Mohamed Tebaa, Mamoutou Dit Mody, Sylla Mahamadou, Mohamed Amine Lakmichi

Health Sciences

Adult bladder tumor is estimated to be the 10th most common tumor worldwide. However, its incidence is much less common in children. It is a disease of the elderly that peaks in the sixth decade of life. Nevertheless, bladder tumors could also affect children, adolescents, and young adults with a prevalence of

Utilizing Nasa-Funded Biotechnology To Improve Resource Management On Earth And In Space, Tyler Wallentine

Research on Capitol Hill

USU senior Tyler is a Peak Summer Research Fellow studying biological engineering. Nitrogen, essential in soil fertilizer for crops, is produced traditionally in a way that uses natural gas and produces CO2. Tyler’s project has been to apply methods developed by NASA for astronauts to conserve and reuse resources to create nitrogen using wastewater and bacteria. Using this method would not only take advantage of waste we already have, but doesn’t produce CO2 and contribute to pollution. Tyler hopes to become a chemical engineer in the space industry and credits his undergraduate research experience. “There’s something about having to obtain …

What Drug Candidates Exist For Treating Covid-19 Variants?, Kolton Hauck

Research on Capitol Hill

USU senior Kolton studies biological engineering and led this project with funding from a student grant. Kolton’s project has been mapping out all possible protein interactions from known SARS-CoV-2 variants and identifying possible drug treatments. Viruses function through these interactions between their proteins and the host cell’s proteins, and this project is especially valuable because the candidates identified are predicted to help treat all known variants, making them more likely to be effective against future mutations.Kolton’s interest in biological research stems from his own experience managing a genetic health disorder. Past medical research greatly benefited him, and he sees his …

Can Cannibinoids Be Used To Prevent Lung Damage From Utah Air Pollution?, Emily Brothersen

Research on Capitol Hill

USU senior Emily, a Mantua native, is an Honors student and Undergraduate Research Fellow. She studies Biological Engineering and has funded and led this project herself with multiple student grants. Emily has been investigating a way to study cell health that can help future researchers test treatments more quickly and affordably. She has used this method to research the potential of cannabinoids to help protect people from lung damage caused by pollution, an issue topical to Utah with our frequent inversions and growing medical cannabis industry. Emily has been involved in research throughout her time at USU and sees it …

Subomiembed: Self-Supervised Representation Learning Of Multi-Omics Data For Cancer Type Classification, Sayed Hashim, Muhammad Ali, Karthik Nandakumar, Mohammad Yaqub

Computer Vision Faculty Publications

For personalized medicines, very crucial intrinsic information is present in high dimensional omics data which is difficult to capture due to the large number of molecular features and small number of available samples. Different types of omics data show various aspects of samples. Integration and analysis of multi-omics data give us a broad view of tumours, which can improve clinical decision making. Omics data, mainly DNA methylation and gene expression profiles are usually high dimensional data with a lot of molecular features. In recent years, variational autoencoders (VAE) [13] have been extensively used in embedding image and text data into …