Biomedical Engineering and Bioengineering Commons^™

Biological Effective Dose (Bed) Distribution Matching For Obtaining Brachytherapy Prescription Doses & Dosimetric Optimization For Hybrid Seed Brachytherapy, Jakub Pritz

USF Tampa Graduate Theses and Dissertations

Radioactive seed implant brachytherapy is a common radiotherapy treatment method for prostate cancer. In current clinical practice, a seed consists of a single isotope, such as ¹²⁵I or ¹⁰³Pd. A seed containing a mixture of two isotopes has been proposed for prostate cancer treatment. This study investigates a method for defining a prescription dose for new seed compositions based on matching the biological equivalent dose (BED) of a reference plan.

Ten prostate cancer cases previously treated using single isotope seeds (5 using ¹²⁵I seeds and 5 using ¹⁰³Pd seeds) were selected for this study. Verification of …

Two-Dimensional Computer Model Of Human Atrial Ablation, Samineh R. Esfahani

USF Tampa Graduate Theses and Dissertations

A finite-element model of a two-dimensional slice of human atrial tissue for the study of the electrograms and propagation of action potentials is presented. Action potential propagation is described by a reaction-diffusion model coupled with the complex Courtemanche et al. atrial cell model. The effects of recording electrode size and location on electrograms are presented. Action potential propagation as a result of atrial fibrillation ablation therapy is also modeled by defining a lesion area with decreased electrical conductivity. The effect of electrical conductivity and geometry of the lesion was also studied. It is shown that the success rate of atrial …

Composition-Structure-Property Relationships For Experimental Composite Nerve Guidance Conduits, Xiaofang Zhang

Theses

Many Nerve Guidance Conduits (NGCs) have been approved by the Food and Drug Administration (FDA) as an alternative to nerve autografting for guiding peripheral nerve regeneration. However these materials offer little therapeutic potential for favourable axon growth environment, and difficulty in balancing the mechanical properties and the degradation rate of the implanted material is also a contemporary challenge. This project involved the design of experimental composite NGCs comprising glass particles and Pluronic FI27 in the copolymer (poly(lactic-co-glycolic acid)) and examined the composition-structure-property relationships for such materials. Three glasses (0.5Si-(x) Na-0.2Ca-0.13Zn-(0.17-x) Ce) (0.0.04 > x > 0.14) were produced. Glasses were characterised using …

On Improving Electrooculogram-Based Computer Mouse Systems: The Accelerometer Trigger, Johnalan Keegan, Edward Burke, James Condron, Eugene Coyle

Conference Papers

Eye tracking is a well-established method of computer control for profoundly paralysed people (Anson et al., 2002). Cameras are commonly used to track eye movements (Morimoto et al., 2005) but one alternative is the bioelectrical signal known as the electrooculogram (EOG). There are some EOG mouse control systems that facilitate the use of GUI applications, but certain actions, which are straightforward using a conventional mouse, remain impossible. Unless the eyes are tracking a target, they move in saccades (jumps), making it impossible to voluntarily trace out smooth trajectories with one's gaze, as would be required to draw a smooth curve. …

Longissimus Muscle Fatigue And Injury Response Due To Electrical Stimulation With Varied Work/Rest Ratios, Peter Wawrow

Wayne State University Dissertations

LONGISSIMUS MUSCLE FATIGUE AND INJURY RESPONSE DUE TO ELECTRICAL STIMULATION WITH VARIED WORK/REST RATIOS

BY

PETER WAWROW

May 2011

Advisor: John Cavanaugh, MD

Major: Biomedical Engineering

Degree: Doctor of Philosophy

The estimated yearly cost of lost-time work injuries and illnesses is $140 billion. The average cost of musculoskeletal disorders (MSDs) exceeds all other claims. These injuries persist in spite of ergonomic interventions addressing known risk factors. Work/rest ratios have not received a significant amount of attention, particularly in low back disorders, and it is hypothesized that the lack of adequate rest within a work cycle may contribute to muscle fatigue …

Blood Vessel Diameter Estimation System Using Active Contours, Jane Courtney, Ana Tizon

Conference Papers

The study and analysis of blood vessel geometry has become the basis of medical applications related to early diagnosis and effective monitoring of therapies in vascular diseases. This paper presents a new method to trace the outline of blood vessels from imperfect images and extract useful information about their dimensions in an automated manner. The system consists of a segmentation procedure that uses two Active Contours to detect blood vessel boundaries and a novel approach to measure blood vessel diameters directly as the distance between two points. We have succeeded in designing and implementing an automated, robust, measurement method that …

A Quantitative And Standardized Robotic Method For The Evaluation Of Arm Proprioception After Stroke, Lucia Simo, Claude Ghez, Lior Botzer, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

Stroke often results in both motor and sensory deficits, which may interact in the manifested functional impairment. Proprioception is known to play important roles in the planning and control of limb posture and movement; however, the impact of proprioceptive deficits on motor function has been difficult to elucidate due in part to the qualitative nature of available clinical tests. We present a quantitative and standardized method for evaluating proprioception in tasks directly relevant to those used to assess motor function. Using a robotic manipulandum that exerted controlled displacements of the hand, stroke participants were evaluated, and compared with a control …

A Novel Cable-Driven Robotic Training Improves Locomotor Function In Individuals Post-Stroke, Ming Wu, Jill M. Landry, Sheng-Che Yen, Brian D. Schmit, T. George Hornby, Miriam Rafferty

Biomedical Engineering Faculty Research and Publications

A novel cable-driven robotic gait training system has been tested to improve the locomotor function in individuals post stroke. Seven subjects with chronic stroke were recruited to participate in this 6 weeks robot-assisted treadmill training paradigm. A controlled assistance force was applied to the paretic leg at the ankle through a cable-driven robotic system. The force was applied from late stance to mid-swing during treadmill training. Body weight support was provided as necessary to prevent knee buckling or toe drag. Subjects were trained 3 times a week for 6 weeks. Overground gait speed, 6 minute walking distance, and balance were …

Analysis Of The Performance Of Peanut Fame In A Single Cylinder Idi Engine And Investigations Of Neat Methyl Ester Influence On Fuel Quality, Jeffery Lewis

College of Graduate Studies: Theses & Dissertations

Author's abstract: To meet evolving standards set forth by the U.S. EPA and U.S. Energy Policy it is necessary to consider a variety of feedstock for biofuels synthesis and to understand the role individual fatty acids contribute to the overall performance. It is the belief of the authors that excess peanut production would provide an excellent source for high quality biodiesel feedstock, and the complete property and combustion analysis of the fatty acid components will provide insight for future biofuel developments. The preliminary investigations of the project focused on the combustion performance and thermal efficiency of peanut FAME and its …

Bcc Skin Cancer Diagnosis Based On Texture Analysis Techniques, Shao-Hui Chuang, Xiaoyan Sun, Wen-Yu Chang, Gwo-Shing Chen, Adam Huang, Jiang Li, Frederic D. Mckenzie

Electrical & Computer Engineering Faculty Publications

In this paper, we present a texture analysis based method for diagnosing the Basal Cell Carcinoma (BCC) skin cancer using optical images taken from the suspicious skin regions. We first extracted the Run Length Matrix and Haralick texture features from the images and used a feature selection algorithm to identify the most effective feature set for the diagnosis. We then utilized a Multi-Layer Perceptron (MLP) classifier to classify the images to BCC or normal cases. Experiments showed that detecting BCC cancer based on optical images is feasible. The best sensitivity and specificity we achieved on our data set were 94% …

On The Visual Quality Enhancement Of Super-Resolution Images, Amr Hussein Yousef, Jiang Li, Mohammad Karim, Andrew G. Tescher (Ed.)

Electrical & Computer Engineering Faculty Publications

Super-resolution (SR) is the process of obtaining a higher resolution image from a set of lower resolution (LR) blurred and noisy images. One may, then, envision a scenario where a set of LR images is acquired with a sensor on a moving platform. In such a case, an SR image can be reconstructed in an area of sufficient overlap between the LR images which generally have a relative shift with respect to each other by subpixel amounts. The visual quality of the SR image is affected by many factors such as the optics blur, the inherent signalto- noise ratio of …

Pulmonary Particle Deposition In Relation To Age, Body Weight, And Species, Lisa M. Weber

Electronic Theses and Dissertations

As a result of dissimilarity in lung morphometry and physiological conditions, therapeutic aerosol particles deposit differently in humans of various ages and body weights. These particles also deposit differently in non-human species that are often utilized in inhalation and dosing studies. The focus of this work is to determine the optimal particle size and deposition (traditional efficiency and volume-weighted) of therapeutic particles in humans of both genders ranging in age from 3 months old to 21 years old and three non-human species (B6C3F₁ mouse, Long-Evans hooded rat, and Beagle dog). This study finds that in humans, both optimal …

Neurorehabilitation Of The Hand Using The Cybergrasp[Tm] And Mirror Image, Amy Frances Boos

Theses

In recent years, researchers have explored the use of a mirror image as a means of rehabilitation for individuals suffering from hemiparesis. Through neuroimaging and functional testing, neurological improvement has been demonstrated in those that engage in mirror therapy. Bilateral training, or simultaneous movement of both sides of the body, has also been studied as a treatment method to improve function after cerebral vascular accident. The development of robotic systems to assist movement of the human body has played a major role in the fabrication of bilateral training devices.

In this experiment, the CyberGrasp™ robotic exoskeleton was used to assist …

The Feasibility Of Using Bifidobacteria Bifidum (Atcc 700541) For The Production Of Prebiotic Oligosaccharides, Candice Marie Luehrs

Masters Theses

"Galactooligosaccharides (GOS) are prebiotics that are being used to influence intestinal microbiota towards health promoting, beneficial bacteria like bifidobacteria. Natural sources of GOS are not found in suitable levels to achieve the desired health effects so economically viable commercial production methods are important. Enzymatic conversion of lactose to GOS through transgalactosylation is a preferred method since the starting material is inexpensive and readily available. Enzymes used in batch production are purified from fungal or bacterial sources or remain in whole cells cultured for GOS production. Purified or unbound enzymes are single use whereas enzymes retained within whole cells can potentially …

Effects Of Wrist Tendon Vibration On Targeted Upper-Arm Movements In Poststroke Hemiparesis, Megan O. Conrad, Robert A. Scheidt, Brian D. Schmit

Biomedical Engineering Faculty Research and Publications

Background. Impaired motor control of the upper extremity after stroke may be related to lost sensory, motor, and integrative functions of the brain. Artificial activation of sensory afferents might improve control of movement by adding excitatory drive to sensorimotor control structures. The authors evaluated the effect of wrist tendon vibration (TV) on paretic upper-arm stability during point-to-point planar movements. Methods. TV (70 Hz) was applied to the forearm wrist musculature of 10 hemiparetic stroke patients as they made center-out planar arm movements. End-point stability, muscle activity, and grip pressure were compared as patients stabilized at the target position …

A Database For Estimating Scanner-Specific Ct Dose, Taly Gilat-Schmidt

Biomedical Engineering Faculty Research and Publications

Purpose: To develop a database for estimating scanner-specific organ dose in a voxelized patient model for any spectral shape and angular tube current modulation setting. The database enables the estimation of organ dose for both existing and novel acquisition techniques without requiring Monte Carlo simulations.

Methods: The transport of monoenergetic photons through three phantoms was simulated with the PENELOPE Monte Carlo radiation transport routines at 5 – 150 keV in 1 keV increments at 1000 projections in 0.36 degree increments. The source-to-detector distance for each simulation was 100 cm, with a source-to-isocenter distance of 50 cm. The lateral and axial …

Biophysical Properties Of The Aorta In Patients With Marfan Syndrome And Related Connective Tissue Disorders: Evaluation With Mri And Computational Fluid Dynamics Modeling, Joseph A. Camarda, Michael G. Earing, Ronak Jashwant Dholakia, Hongfeng Wang, Sung Kwon, John F. Ladisa Jr., Margaret M. Samyn

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Sensory Motor Remapping Of Space In Human-Machine Interfaces, Ferdinando A. Mussa-Ivaldi, Maura Casadio, Zachary C. Danziger, Kristine M. Mosier, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

Studies of adaptation to patterns of deterministic forces have revealed the ability of the motor control system to form and use predictive representations of the environment. These studies have also pointed out that adaptation to novel dynamics is aimed at preserving the trajectories of a controlled endpoint, either the hand of a subject or a transported object. We review some of these experiments and present more recent studies aimed at understanding how the motor system forms representations of the physical space in which actions take place. An extensive line of investigations in visual information processing has dealt with the issue …

Development, Validation, And Application Of A Noninvasive Spinal Motion Measurement System, Shaun Kevin Stinton

University of Kentucky Doctoral Dissertations

Spontaneous vertebral fractures are a large and growing health care problem. Biomechanical factors, specifically, abnormal posture or gait‐related spinal motion may interact with age‐weakened bone to induce altered spinal biomechanics that in turn increase the likelihood of vertebral body fracture. This research takes steps towards the goal of reducing the number of vertebral fractures in two phases: 1) Validation of a noninvasive spinal motion measurement system in cadaver torsos and 2) Application of the measurement system in human subjects.

The cadaver study compared vertebral motion at 4 levels (T7,T12,L3,L5) as measured by adhesive skin markers versus motion measured by bone …

Computational Analyses Of The Uptake And Distribution Of Carbon Monoxide (Co) In Human Subjects, Kinnera Chada

University of Kentucky Doctoral Dissertations

Carbon monoxide (CO) is an odorless, colorless, tasteless gas that binds to hemoglobin with high affinity. This property underlies the use of low doses of CO to determine hemoglobin mass (M_Hb) in the fields of clinical and sports medicine. However, hemoglobin bound to CO is unable to transport oxygen and exposure to high CO concentrations is a significant environmental and occupational health concern. These contrasting aspects of CO—clinically useful in low doses but potentially lethal in higher doses—mandates a need for a quantitative understanding of the temporal profiles of the uptake and distribution of CO …

Prediction Of Brain Tumor Progression Using Multiple Histogram Matched Mri Scans, Debrup Banerjee, Loc Tran, Jiang Li, Yuzhong Shen, Frederic Mckenzie, Jihong Wang, Ronald M. Summers (Ed.), Bram Van Ginneken (Ed.)

Electrical & Computer Engineering Faculty Publications

In a recent study [1], we investigated the feasibility of predicting brain tumor progression based on multiple MRI series and we tested our methods on seven patients' MRI images scanned at three consecutive visits A, B and C. Experimental results showed that it is feasible to predict tumor progression from visit A to visit C using a model trained by the information from visit A to visit B. However, the trained model failed when we tried to predict tumor progression from visit B to visit C, though it is clinically more important. Upon a closer look at the MRI scans …

Automatic Detection Of Aircraft Emergency Landing Sites, Yu-Fei Shen, Zia-Ur Rahman, Dean Krusienski, Jiang Li, Zia-Ur Rahman (Ed.), Stephen E. Reichenbach (Ed.), Mark Allen Neifeld (Ed.)

Electrical & Computer Engineering Faculty Publications

An automatic landing site detection algorithm is proposed for aircraft emergency landing. Emergency landing is an unplanned event in response to emergency situations. If, as is unfortunately usually the case, there is no airstrip or airfield that can be reached by the un-powered aircraft, a crash landing or ditching has to be carried out. Identifying a safe landing site is critical to the survival of passengers and crew. Conventionally, the pilot chooses the landing site visually by looking at the terrain through the cockpit. The success of this vital decision greatly depends on the external environmental factors that can impair …

Modeling And Quantitative Analysis Of White Matter Fiber Tracts In Diffusion Tensor Imaging, Xuwei Liang

University of Kentucky Doctoral Dissertations

Diffusion tensor imaging (DTI) is a structural magnetic resonance imaging (MRI) technique to record incoherent motion of water molecules and has been used to detect micro structural white matter alterations in clinical studies to explore certain brain disorders. A variety of DTI based techniques for detecting brain disorders and facilitating clinical group analysis have been developed in the past few years. However, there are two crucial issues that have great impacts on the performance of those algorithms. One is that brain neural pathways appear in complicated 3D structures which are inappropriate and inaccurate to be approximated by simple 2D structures, …

Distal Radioulnar Joint Biomechanics And Forearm Muscle Activity, Joseph Scott Bader

University of Kentucky Doctoral Dissertations

Optimal management of fractures, post-traumatic arthritis and instability of the distal radioulnar joint (DRUJ) requires an understanding of the forces existing across this joint as a function of the activities of daily living. However, such knowledge is currently incomplete. The goal of this research was to quantify the loads that occur at the DRUJ during forearm rotation and to determine the effect that individual muscles have on those loads.

Human and cadaver studies were used to analyze the shear (A-P), transverse (M-L) and resultant forces at the DRUJ and to determine the role that 15 individual muscles had on those …

The Effect Of Practice On Eye Movements In The 1/D Paradigm, Will Seidelman

University of Kentucky Master's Theses

Previous studies have demonstrated that observers may ignore highly salient feature singletons during a conjunction search task through focusing the attentional window (Belopolsky, Zwaan, Theeuwes, & Kramer, 2007), or by the suppression of bottom-up information (Treisman & Sato, 1990). In the current study, observers’ eye movements were monitored while performing a search task in which a feature singleton was present and corresponded with the target at a chance level. With practice, observers were less likely to make an initial saccade toward the singleton item, but initial saccades directed at the target were likely throughout. Results demonstrate that, in an effort …