Biomedical Engineering and Bioengineering Commons^™

Morphology Of Brain Sulci Trabeculae And Its Effect On Brain During Impacts, Sharlin Anwar

Dissertations and Theses

Traumatic brain injury (TBI) is an intracranial injury caused by direct contact or non-contact head impacts to the brain. TBI is a major problem that accounts for high incidents of hospitalizations each year. Thus, it is important to understand and predict the occurrence of TBI in an impact. It has been shown that the subarachnoid space (SAS) trabeculae play an important role in damping the effect of an impact, thus reducing the injuries. However, the influence of sulci parameters and the sulci trabeculae in TBI due to impact is unexplored. Studies have shown that inclusion of sulci in brain models …

The Synthesis And Characterization Of Dual-Modified Carboxymethylcellulose For Bioadhesive Applications, Fabrice Bernard

Dissertations and Theses

Reparative medical techniques, in conjunction with existing and emerging tissue adherents and sealants, offer practicing physicians a wide variety of tools to improve the functionality, performance, and safety of surgical interventions. Carboxymethylcellulose (CMC) is a plant-derived polymer that is cytocompatible, biocompatible, biodegradable, and inexpensive. The need for a non-toxic but strongly adherent material motivated the development of an injectable bioadhesive system containing CMC modified with functional methacrylate and aldehyde groups that could potentially be used as an annulus fibrosus sealant or as a supplement to existing wound closure materials. After modification, the polymer was characterized via NMR spectroscopy, Schiff’s base …

Calibration And Validation Of An In Vitro Ultrasound Device To Deliver Targeted Thermal Enhancement Of Hmsc Osteogenesis, Dionne Dawkins

Dissertations and Theses

Osteoarthritis (OA) is a disease that affects millions of people annually, often the elderly, and limits their physical abilities. Current methods of treating OA are often very invasive, and expensive, costing the Medicare system billions of dollars annually. A minimally invasive therapy that can be localized to the affected area that provides both relief and a short recovery time is optimal for treating the disease. For targeted therapy and clinical use, therapeutic ultrasound in the 0.7 MHz to 3 MHz frequency range can provide relief and is convenient, portable and localized. Low-intensity pulsed ultrasound (LIPUS) has been proven in clinical …

Chemotaxis Of Central Nervous System-Derived Tumor Cells Within Controlled Microenvironments, Jennifer Rico Varela

Dissertations and Theses

Medulloblastoma (MB) is a malignant pediatric brain tumor known for its aggressive metastatic potential. Despite the well-documented migration of MB cells to other parts of the brain and spinal column, MB chemotaxis is poorly understood. Herein, we examined the in vitro migratory and cellular responses of MB-derived cells to external signaling of Epidermal Growth Factor (EGF), hepatocyte growth factor (HGF), platelet-derived growth factor (PDGF-BB), and the stromal cell-derived factors 1-alpha (SDF-1). Experiments utilized transwell assays and immunocytochemistry to identify receptor activation in MB migration, and used a microfluidic platform to examine directionality, trajectory, and gradient- dependence of motile cells. Data …

Assessment Of Injection Behavior Of Commercially-Available Bone Bsms For Subchondroplasty Procedures, Dinely A. Colon

Dissertations and Theses

Subchondroplasty is a procedure that utilized bone substitutes materials (BSMs) or bone cement to correct bone defects in the subchondral bone. The two main materials used to compose BSMs are poly-methyl-methacrylate (PMMA) and calcium phosphate cement (CaP). Currently, there is no optimal bone material substitute in the market that can provide both the adequate mechanical support and the right viscosity to reach the affected area in the subchondral bone. In addition, there is also no established parameter for their proper use, based on the defect size and location. PMMA possesses comparable mechanical properties to bone (i.e. 96 MPa in compressive …

Carboxymethylcellulose Hydrogels Support Central Nervous System-Derived Tumor-Cell Chemotactic Migration: Comparison With Conventional Extracellular Matrix Macromolecules, Tanya Singh, Chandrasekhar Kothapalli, Devika Varma, Steven B. Nicoll, Maribel Vazquez

Publications and Research

The local microenvironment plays an important role in maintaining the dynamics of the extracellular matrix and the cell-extracellular matrix relationship. The extracellular matrix is a complex network of macromolecules with distinct mechanical and biochemical characteristics. Disruptions in extracellular matrix homeostasis are associated with the onset of cancer. The extracellular matrix becomes highly disorganized, and the cell-matrix relationship changes, resulting in altered cell-signaling processes and metastasis. Medulloblastoma is one of the most common malignant pediatric brain tumors in the United States. In order to gain a better understanding of the interplay between cell-extracellular matrix interactions and cell-migratory responses in tumors, eight …

Utilizing Fast Spin Echo Mri To Reduce Image Artifacts And Improve Implant/Tissue Interface Detection In Refractory Parkinson’S Patients With Deep Brain Stimulators, Subhendra N. Sarkar, Pooja R. Sarkar, Efstathios Papavassiliou, Rafael Rojas

Publications and Research

Introduction. In medically refractory Parkinson’s disease (PD) deep-brain stimulation (DBS) is an effective therapeutic tool. Postimplantation MRI is important in assessing tissue damage and DBS lead placement accuracy. We wanted to identify which MRI sequence can detectDBS leads with smallest artifactual signal void, allowing better tissue/electrode edge conspicuity.

Methods. Using an IRB approved protocol 8 advanced PDpatientswere imagedwithinMRconditional safety guidelines at lowRF power (SAR ≤ 0.1 W/kg) in coronal plane at 1.5T by various sequences.The image slices were subjectively evaluated for diagnostic quality and the lead contact diameters were compared to identify a sequence least affected by metallic leads.

Results …

A Comprehensive View Of Electrosleep: The History, Finite Element Models And Future Directions, Berkan Guleyupoglu

Dissertations and Theses

Transcranial Electrical Stimulation (tES) encompasses all methods of non-invasive current application to the brain used in research and clinical practice. We present the first comprehensive and technical review, explaining the evolution of tES in both terminology and dosage over the past 100 years of research to present day. Current transcranial Pulsed Current Stimulation (tPCS) approaches such as Cranial Electrotherapy Stimulation (CES) descended from Electrosleep (ES) through Cranial Electro-stimulation Therapy (CET), Transcerebral Electrotherapy (TCET), and NeuroElectric Therapy (NET) while others like Transcutaneous Cranial Electrical Stimulation (TCES) descended from Electroanesthesia (EA) through Limoge, and Interferential Stimulation. Prior …

Pre-Saccadic Modulation Of The Visually Evoked Potential, Leslie Guadron

Dissertations and Theses

Saccades are rapid eye movements that allow us to focus the fovea on different parts of our visual environment. Many psychophysical studies have shown that subjects can discriminate stimuli presented at the saccadic target better than at any other location before an eye movement is made. It is believed that covert attention allotted to the intended destination of a saccade, called pre-saccadic attention, accounts for the improved discrimination of stimuli. Covert top-down attention, which consists of orienting your attention, and not your gaze, to an object in your visual periphery, is known to facilitate behavioral performance in a manner similar …

Microfluidic Generated Egf-Gradients Induce Chemokinesis Of Transplantable Retinal Progenitor Cells Via The Jak/Stat And Pi3kinase Signaling Pathways., Uchenna J. Unachukwu, Moira Sauane, Maribel Vazquez, Stephen Redenti

Publications and Research

A growing number of studies are evaluating retinal progenitor cell (RPC) transplantation as an approach to repair retinal degeneration and restore visual function. To advance cell-replacement strategies for a practical retinal therapy, it is important to define the molecular and biochemical mechanisms guiding RPC motility. We have analyzed RPC expression of the epidermal growth factor receptor (EGFR) and evaluated whether exposure to epidermal growth factor (EGF) can coordinate motogenic activity in vitro. Using Boyden chamber analysis as an initial high-throughput screen, we determined that RPC motility was optimally stimulated by EGF concentrations in the range of 20-400 ng/ml, with decreased …

Biomarkers For Brain Disorders Electrochemically Detected By Broderick Probe Microelectrodes/Biosensors, Waqas Saleem, Patricia A. Broderick

Publications and Research

Here, we present results from two independent studies carried out using Neuromolecular Imaging (NMI) with miniature BRODERICK PROBE® biosensors. In the first study, we imaged neurotransmitters and neurochemicals in human epilepsy patients intraoperatively during early and late neurodegeneration. In the second study, we imaged neurotransmitters and neurochemicals in an experimental murine model using animals with and without neurodegeneration caused by Parkinson’s disease (PD). We compared our results derived from animals with lesioned group (PD) with non-lesioned group (non-PD), using the same in vivo NMI paradigm. NMI biotechnology enabled neurotransmitters, neuropeptides and neurochemical imaging of dopamine (DA), serotonin (5-HT), homovanillic acid …

Effect Of Rolling On Viscoelastic Fluids Using A Novel Testing Device, Aswini Mangadu

Dissertations and Theses

The purpose of this research thesis project was to develop a mechanical testing device that could enable us to load articular cartilage with a rolling/sliding motion. This novel device was then used to observe the effect of a rolling motion on the fluid film thickness of different lubricants (motor oil, synovial fluid and Hyaluronic Acid (HA)) to varying loads (1kg, 2,kg, 3kg and 4kg) and speeds (10, 25, 48 and 91 mm/s) applied on the sample fluids for 10 cycles. We were able to examine the effect of different speeds within each load for each of the fluid that was …

A Novel Visual Stimulation Paradigm: Exploiting Individual Primary Visual Cortex Geometry To Boost Steady State Visual Evoked Potentials (Ssvep), Marta Isabel Vanegas Arroyave

Dissertations and Theses

The steady-state visual evoked potential (SSVEP) is an electroencephalographic response to flickering stimuli generated in significant part by activity in primary visual cortex (V1). SSVEP signal-to-noise ratio is generally low for stimuli that are located in the visual periphery, at frequencies higher than 20 Hz, or at low contrast. Because of the typical "cruciform" geometry of V1, large stimuli tend to excite neighboring cortical regions of opposite orientation, likely resulting in electric field cancellation. In Study 1, we explored ways to exploit V1 geometry in order to boost scalp SSVEP amplitude via oscillatory summation, by manipulating flicker-phase offsets among angular …

Design, Product Development And Risk Assessment Of Tin (Sn) Ring Electrodes As A Substitute To Silver-Silver Chloride (Ag Agci) Ring Electrodes For High Definition Transcranial Direct Current Stimulation (Hd-Tdcs), Linford Leitch

Dissertations and Theses

The objective of this research thesis is to test the viability of Tin (Sn) ring electrodes as an inexpensive alternative to sintered Silver-Silver Chloride (Ag|AgCl) ring electrodes for High Definition – transcranial Direct Current Stimulation (HD-tDCS). Throughout our initial bench top testing of tin electrodes in combination with a ‘conductive electrode gel’, the passing of a 2mA direct current on agar block showed the formation of white cloud around the anode electrode and a cluster of air bubbles on the cathode. The analysis of pertinent literature indicates that the white milky substance produced during the stimulation at the anode is …

Finite Element Study Of Transcranial Direct Current Stimulation: Customization Of Models And Montages, Dennis Q. Truong

Dissertations and Theses

Transcranial Direct Current Stimulation (tDCS) is a non-invasive neuromodulation technique that applies low amplitude current via electrodes placed on the scalp. Rather than directly eliciting a neuronal response, tDCS is believed to modulate excitability – encouraging or suppressing activity in regions of the brain depending on the polarity of stimulation. The particular application of tDCS is often determined by the electrode configuration and intensity of stimulation. MRI-derived finite element models have been developed to analyze the effect of these parameters allowing novel electrode configurations to be tested in subject specific models. By creating a subject specific model of an obese …

Application Of Computational Fluid Dynamics As A Simulation-Based Design Guide In A Microfluidic 3d Living Cell Array (3d Lca) Device, A.H. Rezwanuddin Ahmed

Dissertations and Theses

The use of computational fluid dynamics (CFD) as a tool in the aerodynamics and oil industry provides a reinforcement to efficiency in the design of aircrafts or for understanding the flow through pipes. A similar approach can be taken towards microfluidics, where traditionally devices have been designed based on experience or physiological replication, and a CFD simulation is shown post-manufacture to show the flow and diffusion patterns present. In this study, a reverse approach is suggested, by designing the device first in CFD and perform simulations on variations of alterable parameters to get insight on how the changing parameters affect …

Transport Pathway Across Hcaecs Uncer Convective Condtitions And The Role Of Apoptosis In Ldl Transport Through Hcaecs, Janpen Phupeerasupong

Dissertations and Theses

No abstract provided.

A Novel Biomaterial Enables Chemotactic Study Of Motile Central Nervous System-Derived Tumor Cells, Tanya Singh

Dissertations and Theses

"The local cell microenvironment plays an important role in maintaining the dynamics of the extracellular matrix (ECM) and the cell-ECM relationship. ECM is a complex network of macromolecules with distinct mechanical and biochemical characteristics [1]. The multifaceted interactions that occur between cells and the ECM are crucial to the regulation of processes that maintain homeostasis. These mechanisms are often deregulated during cancer onset and progression, which cause the ECM to become highly disorganized, alter the cell-matrix interactions, and promote increased hypervascularity and metastasis as these components are indicative of cancer progression. Medulloblastoma (MB) is one of the most common, malignant …

Design, Implementation, And Performance Study Of An Open Source Eye-Control System To Pilot A Parrot Ar.Drone Quadrocopter, John M. Ettikkalayil

Dissertations and Theses

Natural user interface is a fairly new concept in the field of human-computer interaction. It is the idea of using every day natural human behaviors and actions to control a device. An example of a natural user interface is touch control technology in smartphones, tablets, and new laptops. The interaction is more direct when compared to artificial input devices like a keyboard and mouse. Though natural user interface devices might not perform as well as standard input devices for certain applications, for other applications they are now the de facto standard. A new user interface that is poised to be …

Role Of Epidermal Growth Factor-Triggered Pi3k/Akt Signaling In The Migration Of Medulloblastoma-Derived Cells, Veronica Dudu, Richard A. Able, Jr., Veronica Rotari, Qingjun Kong, Maribel Vazquez

Publications and Research

Medulloblastoma (MB) is the most common brain cancer diagnosed among children. The cellular pathways that regulate MB invasion in response to environmental cues remain incompletely understood. Herein, we examine the migratory response of human MB-derived Daoy cells to different concentration profiles of Epidermal Growth Factor (EGF) using a microfluidic system. Our findings provide the first quantitative evidence that EGF concentration gradients modulate the chemotaxis of MB-derived cells in a dose-dependent manner via the EGF receptor (EGF-R). Data illustrates that higher concentration gradients caused increased number of cells to migrate. In addition, our results show that EGF-induced receptor phosphorylation triggered the …

Computational Model Of Neuron-Astrocyte Interputational Model Of Neuron-Astrocyte Interactions During Focal Seizure Generationactions During Focal Seizure Generation, Davide Reato, Mario Cammarota, Lucas C. Parra, Giorgio Carmignoto

Publications and Research

Empirical research in the last decade revealed that astrocytes can respond to neurotransmitters with Ca2+ elevations and generate feedback signals to neurons which modulate synaptic transmission and neuronal excitability. This discovery changed our basic understanding of brain function and provided new perspectives for how astrocytes can participate not only to information processing, but also to the genesis of brain disorders, such as epilepsy. Epilepsy is a neurological disorder characterized by recurrent seizures that can arise focally at restricted areas and propagate throughout the brain. Studies in brain slice models suggest that astrocytes contribute to epileptiform activity by increasing neuronal excitability …

Sendai Virus-Based Liposomes Enable Targeted Cytosolic Delivery Of Nanoparticles In Brain Tumor-Derived Cells, Veronica Dudu, Veronica Rotari, Maribel Vazquez

Publications and Research

BACKGROUND: Nanotechnology-based bioassays that detect the presence and/or absence of a combination of cell markers are increasingly used to identify stem or progenitor cells, assess cell heterogeneity, and evaluate tumor malignancy and/or chemoresistance. Delivery methods that enable nanoparticles to rapidly detect emerging, intracellular markers within cell clusters of biopsies will greatly aid in tumor characterization, analysis of functional state and development of treatment regimens.

RESULTS: Experiments utilized the Sendai virus to achieve in vitro, cytosolic delivery of Quantum dots in cells cultured from Human brain tumors. Using fluorescence microscopy and Transmission Electron Microscopy, in vitro experiments illustrated that these virus-based …

Chemotaxis Of Drosophila Glia With Controlled Microenvironments, Cade Beck

Dissertations and Theses

No abstract provided.

Neural Correlates Of Phantom Auditory Perception, Paul Joseph S. Deguzman

Dissertations and Theses

No abstract provided.

The Role Of Rugose, A Drosophila Akap And Loco, A Rgs Protein In Synaptogenesis And Development, Kemeh Georgina

Dissertations and Theses

No abstract provided.

Development Of A Human Lung Cancer Cytochrome C-Gfp Reporter Cell Line To Study Anti-Cancer Drug Responses In Apoptosis Pathways, Sidra A Piracha

Dissertations and Theses

"Currently chemotherapy and radiotherapy are the most popular methods for cancer treatments after surgery, but lack of specificity and are thus toxic to the healthy human cells. Studies have shown that targeted therapies have been linked to activation of apoptosis signal pathways (cascade of caspases) in cancer cells including intrinsic and extrinsic pathways. One of the major pathways leading to caspase activation involves the release of cytochrome-c from mitochondria. However, in some tumor cells this pathway is inactivated due to the mutation of mitochondria membrane stabilizing proteins (e.g. Bcl-2, Bcl-xL). Therefore, the overall objective of this proposal was to understand …

Technologya Nd Protocolsf Or Translational Researchin Electricals Timulation, Asif Rahman

Dissertations and Theses

"Noninvasive electrical stimulation techniques like transcranial direct currents stimulation (tDCS) have been demonstrated to modulate neural function. Weak constant current is applied via scalp electrodes leading to subthreshold changes in neuron membrane potentials. Neuromodulation of the cortex using direct current (DC) stimulation may be a viable treatment for neurological disorders, enhancing cognitive function as well as facilitating neural plasticity. Theoretically, tDCS can employ many electrodes montages to emphasize directionality, focality, or intensity (Datta 2008, 2009, Dmochowski 2011) but what remains unclear is how these parameters influence cortical neurons considering their orientation and the local synaptic circuit in the region of …

Characterization Of Rheological Properties And Degradation Of Genipin Crosslinked Fibrin Hydrogel For Annulus Repair, Dave Khyati

Dissertations and Theses

No abstract provided.

Effects Of Mild Heating On The Osteogenic Differentiation Of Human Mesenchymal Stem Cells During Inflammation, Kristifor Sunderic

Dissertations and Theses

"Current surgical procedures to treat osteoarthritis have varying degrees of success, but carry inherent risks and a finite life expectancy. A more permanent solution is a treatment that regenerates biologically viable tissue that integrates with the patient and retains functionality. For maximal effectiveness, such a treatment should also repair bone loss known to occur in osteoarthritis and attenuate chronic inflammation that can obstruct healing. Mesenchymal stem cells have great potential to be used as part of a novel therapy for bone and cartilage regeneration. They are a highly regulated, self-renewing population of cells with potent mechanisms to avoid allogeneic rejection, …

Life-Cycle Optimization And Flow Control In A Nickel-Zinc Flow Assisted Battery, Steve Lever

Dissertations and Theses

Nickel-Zinc flow-assisted rechargeable batteries are currently being explored as a potential new generation of large-scale, low-cost energy storage devices. The viability of a commercial nickel-zinc battery has been hindered by the well-known phenomena of dendrite formation and zinc morphology variation over time. Applying electrolyte flow to traditional nickel-zinc battery systems has demonstrated significant life cycle performance improvements by reducing both dendrite formation and morphological variation. It has also been demonstrated that periodic low-current reconditioning discharge further improves cycle life. This thesis examines the effect of eliminating electrolyte flow during discharge of nickel-zinc flow assisted batteries, which would allow a much …