Engineering Commons^™

Deep Learning For Automatic Microscopy Image Analysis, Shenghua He

McKelvey School of Engineering Graduate Student Theses & Dissertations

Microscopy imaging techniques allow for the creation of detailed images of cells (or nuclei) and have been widely employed for cell studies in biological research and disease diagnosis in clinic practices.Microscopy image analysis (MIA), with tasks of cell detection, cell classification, and cell counting, etc., can assist with the quantitative analysis of cells and provide useful information for a cellular-level understanding of biological activities and pathology. Manual MIA is tedious, time-consuming, prone to subject errors, and are not feasible for the high-throughput cell analysis process. Thus, automatic MIA methods can facilitate all kinds of biological studies and clinical tasks. Conventional …

Defining And Detecting Toxicity On Social Media: Context And Knowledge Are Key, Amit Sheth, Valerie Shalin, Ugur Kursuncu

Publications

As the role of online platforms has become increasingly prominent for communication, toxic behaviors, such as cyberbullying and harassment, have been rampant in the last decade. On the other hand, online toxicity is multi-dimensional and sensitive in nature, which makes its detection challenging. As the impact of exposure to online toxicity can lead to serious implications for individuals and communities, reliable models and algorithms are required for detecting and understanding such communications. In this paper We define toxicity to provide a foundation drawing social theories. Then, we provide an approach that identifies multiple dimensions of toxicity and incorporates explicit knowledge …

Detecting Malware In Memory With Memory Object Relationships, Demarcus M. Thomas Sr.

Theses and Dissertations

Malware is a growing concern that not only affects large businesses but the basic consumer as well. As a result, there is a need to develop tools that can identify the malicious activities of malware authors. A useful technique to achieve this is memory forensics. Memory forensics is the study of volatile data and its structures in Random Access Memory (RAM). It can be utilized to pinpoint what actions have occurred on a computer system.

This dissertation utilizes memory forensics to extract relationships between objects and supervised machine learning as a novel method for identifying malicious processes in a system …

Predictive Computational Materials Modeling With Machine Learning: Creating The Next Generation Of Atomistic Potential Using Neural Networks, Mashroor Shafat Nitol

Theses and Dissertations

Machine learning techniques using artificial neural networks (ANNs) have proven to be effective tools to rapidly mimic first principles calculations. These tools are capable of sub meV/atom accuracy while operating with linear scaling with respect to the system size. Here novel interatomic potentials are constructed based on the rapid artificial neural network (RANN) formalism. This approach generates precise force fields for various metals that have historically been difficult to describe at the atomic scale. These force fields can be utilized in molecular dynamics simulations to provide new physical insights. The RANN formalism, which is incorporated into a LAMMPS molecular dynamics …

Using A Systemic Skills Model To Build An Effective 21st Century Workforce: Factors That Impact The Ability To Navigate Complex Systems, Morteza Nagahi

Theses and Dissertations

The growth of technology and the proliferation of information made modern complex systems more fragile and vulnerable. As a result, competitive advantage is no longer achieved exclusively through strategic planning but by developing an influential cadre of technical people who can efficiently manage and navigate modern complex systems. The dissertation aims to provide educators, practitioners, and organizations with a model that helps to measure individuals’ systems thinking skills, complex problem solving, personality traits, and the impacting demographic factors such as managerial and work experience, current occupation type, organizational ownership structure, and education level. The intent is to study how these …

Machine Learning For Stock Prediction Based On Fundamental Analysis, Yuxuan Huang, Luiz Fernando Capretz, Danny Ho

Electrical and Computer Engineering Publications

Application of machine learning for stock prediction is attracting a lot of attention in recent years. A large amount of research has been conducted in this area and multiple existing results have shown that machine learning methods could be successfully used toward stock predicting using stocks’ historical data. Most of these existing approaches have focused on short term prediction using stocks’ historical price and technical indicators. In this paper, we prepared 22 years’ worth of stock quarterly financial data and investigated three machine learning algorithms: Feed-forward Neural Network (FNN), Random Forest (RF) and Adaptive Neural Fuzzy Inference System (ANFIS) for …

A Sinusoidal Signal Reconstruction Method For The Inversion Of The Mel-Spectrogram, Anastasia Natsiou, Sean O'Leary

Articles

The synthesis of sound via deep learning methods has recently received much attention. Some problems for deep learning approaches to sound synthesis relate to the amount of data needed to specify an audio signal and the necessity of preserving both the long and short time coherence of the synthesised signal. Visual time-frequency representations such as the log-mel-spectrogram have gained in popularity. The log- mel-spectrogram is a perceptually informed representation of audio that greatly compresses the amount of information required for the description of the sound. However, because of this compression, this representation is not directly invertible. Both signal processing and …

Quantum State Estimation And Tracking For Superconducting Processors Using Machine Learning, Shiva Lotfallahzadeh Barzili

Computational and Data Sciences (PhD) Dissertations

Quantum technology has been rapidly growing; in particular, the experiments that have been performed with superconducting qubits and circuit QED have allowed us to explore the light-matter interaction at its most fundamental level. The study of coherent dynamics between two-level systems and resonator modes can provide insight into fundamental aspects of quantum physics, such as how the state of a system evolves while being continuously observed. To study such an evolving quantum system, experimenters need to verify the accuracy of state preparation and control since quantum systems are very fragile and sensitive to environmental disturbance. In this thesis, I look …

Trajectory Generation For A Multibody Robotic System: Modern Methods Based On Product Of Exponentials, Aryslan Malik

Doctoral Dissertations and Master's Theses

This work presents several trajectory generation algorithms for multibody robotic systems based on the Product of Exponentials (PoE) formulation, also known as screw theory. A PoE formulation is first developed to model the kinematics and dynamics of a multibody robotic manipulator (Sawyer Robot) with 7 revolute joints and an end-effector.

In the first method, an Inverse Kinematics (IK) algorithm based on the Newton-Raphson iterative method is applied to generate constrained joint-space trajectories corresponding to straight-line and curvilinear motions of the end effector in Cartesian space with finite jerk. The second approach describes Constant Screw Axis (CSA) trajectories which are generated …

A Machine Learning Method For The Prediction Of Melt Pool Geometries Created By Laser Powder Bed Fusion, Jonathan Ciaccio

LSU New Orleans Theses and Dissertations

A machine learning model is created to predict melt pool geometries of Ti-6Al-4V alloy created by the laser powder bed fusion process. Data is collected through an extensive literature survey, using results from both experiments and CFD modeling. The model focuses on five key input parameters that influence melt pool geometries: laser power, scanning speed, spot size, powder density, and powder layer thickness. The two outputs of the model are melt pool width and melt pool depth. The model is trained and tested by using the k fold cross validation technique. Multiple regression models are then applied to find the …

A Comparative Study Of Machine Learning-Based Approach For Network Traffic Classification, Kien Trang, An Hoang Nguyen

Knowledge Engineering and Data Science

Internet usage has increased rapidly and become an essential part of human life, corresponding to the rapid development of network infrastructure in recent years. Thus, protecting users’ confidential information when joining the global network becomes one of the most significant considerations. Even though multiple encryption algorithms and techniques have been applied in different parties, including internet providers, and web hosting, this situation also allows the hacker to attack the network system anonymously. Therefore, the significance of classifying network data streams to improve network system quality and security is attracting increasing study interests. This work introduces a machine learning-based approach to …

Network Management, Optimization And Security With Machine Learning Applications In Wireless Networks, Mariam Nabil

Theses and Dissertations

Wireless communication networks are emerging fast with a lot of challenges and ambitions. Requirements that are expected to be delivered by modern wireless networks are complex, multi-dimensional, and sometimes contradicting. In this thesis, we investigate several types of emerging wireless networks and tackle some challenges of these various networks. We focus on three main challenges. Those are Resource Optimization, Network Management, and Cyber Security. We present multiple views of these three aspects and propose solutions to probable scenarios. The first challenge (Resource Optimization) is studied in Wireless Powered Communication Networks (WPCNs). WPCNs are considered a very promising approach towards sustainable, …

Using Custom Ner Models To Extract Dod Specific Entities From Contracts, Kayla P. Haberstich

Theses and Dissertations

The Air Force Sustainment Center collected 3.7 million contracts onto the Air Force Research Laboratory’s high power computers. They are in the format of a .pdf or scanned document, making them unstructured data. The Data Analytics Resource Team extracted the documents into a textual format for use in further analysis. This thesis looks to extract four DOD specific entities (NSN, Part Number, CAGE Code, and Supplier Name) from the contracts using custom NER models. This newly extracted information will allow the Air Force to identify what parts are supplied by which vendors. This information along with historical CLIN pricing for …

Machine-Learning-Based Approach To Decoding Physiological And Neural Signals, Elnaz Lashgari

Computational and Data Sciences (PhD) Dissertations

In recent years, machine learning algorithms have been developing rapidly, becoming increasingly powerful tools in decoding physiological and neural signals. The aim of this dissertation is to develop computational tools, and especially machine learning techniques, to identify the most effective methods for feature extraction and classification of these signals. This is particularly challenging due to the highly non-linear, non-stationery, and artifact- and noise-prone nature of these signals.

Among basic human-control tasks, reaching and grasping are ubiquitous in everyday life. I investigated different linear and non-linear dimensionality reduction techniques for feature extraction and classification of electromyography (EMG) during a reach-grasp-lift task. …

Deepfakes Generated By Generative Adversarial Networks, Olympia A. Paul

Honors College Theses

Deep learning is a type of Artificial Intelligence (AI) that mimics the workings of the human brain in processing data such as speech recognition, visual object recognition, object detection, language translation, and making decisions. A Generative adversarial network (GAN) is a special type of deep learning, designed by Goodfellow et al. (2014), which is what we call convolution neural networks (CNN). How a GAN works is that when given a training set, they can generate new data with the same information as the training set, and this is often what we refer to as deep fakes. CNN takes an input …

Artificial Intelligence Method For The Forecast And Separation Of Total And Hvac Loads With Application To Energy Management Of Smart And Nze Homes, Rosemary E. Alden, Huangjie Gong, Evan S. Jones, Cristinel Ababei, Dan M. Ionel

Electrical and Computer Engineering Faculty Publications

Separating the HVAC energy use from the total residential load can be used to improve energy usage monitoring and to enhance the house energy management systems (HEMS) for existing houses that do not have dedicated HVAC circuits. In this paper, a novel method is proposed to separate the HVAC dominant load component from the house load. The proposed method utilizes deep learning techniques and the physical relationship between HVAC energy use and weather. It employs novel long short-term memory (LSTM) encoder-decoder machine learning (ML) models, which are developed based on future weather data input in place of weather forecasts. In …

Large-Scale Reality Modeling Of A University Campus Using Combined Uav And Terrestrial Photogrammetry For Historical Preservation And Practical Use, Bryce Berrett, Cory Vernon, Haley Beckstrand, Madi Pollei, Kaleb Markert, Kevin Franke, John Hedengren

Faculty Publications

Unmanned aerial vehicles (UAV) enable detailed historical preservation of large-scale infrastructure and contribute to cultural heritage preservation, improved maintenance, public relations, and development planning. Aerial and terrestrial photo data coupled with high accuracy GPS create hyper-realistic mesh and texture models, high resolution point clouds, orthophotos, and digital elevation models (DEMs) that preserve a snapshot of history. A case study is presented of the development of a hyper-realistic 3D model that spans the complex 1.7 km2 area of the Brigham Young University campus in Provo, Utah, USA and includes over 75 significant structures. The model leverages photos obtained during the historic …

Intelligent Sensors For Sustainable Food And Drink Manufacturing, Nicholas J. Watson, Alexander L. Bowler, Ahmed Rady, Oliver J. Fisher, Alessandro Simeone, Josep Escrig, Elliot Woolley, Akinbode A. Adedeji

Biosystems and Agricultural Engineering Faculty Publications

Food and drink is the largest manufacturing sector worldwide and has significant environmental impact in terms of resource use, emissions, and waste. However, food and drink manufacturers are restricted in addressing these issues due to the tight profit margins they operate within. The advances of two industrial digital technologies, sensors and machine learning, present manufacturers with affordable methods to collect and analyse manufacturing data and enable enhanced, evidence-based decision making. These technologies will enable manufacturers to reduce their environmental impact by making processes more flexible and efficient in terms of how they manage their resources. In this article, a methodology …

Investigation Of The Prevalence Of Faults In The Heating, Ventilation, And Air-Conditioning Systems Of Commercial Buildings, Amir Ebrahimifakhar

Durham School of Architectural Engineering and Construction: Dissertations, Theses, and Student Research

This dissertation describes a large-scale investigation of heating, ventilation, and air-conditioning (HVAC) fault prevalence in commercial buildings in the United States. A multi-year dataset with 36,556 pieces of HVAC equipment including air handling units (AHUs), air terminal units (ATUs), and packaged rooftop units (RTUs) was analyzed to determine values for several HVAC fault prevalence metrics. The primary source of data for this study comes from three commercial fault detection and diagnostics (FDD) providers. Since each FDD provider uses different terms to refer to the same fault in an HVAC system, a mapping function was created for each FDD provider’s dataset, …

Pairwise Correlation Analysis Of The Alzheimer’S Disease Neuroimaging Initiative (Adni) Dataset Reveals Significant Feature Correlation, Erik D. Huckvale, Matthew W. Hodgman, Brianna B. Greenwood, Devorah O. Stucki, Katrisa M. Ward, Mark T. W. Ebbert, John S. K. Kauwe, The Alzheimer’S Disease Neuroimaging Initiative, The Alzheimer’S Disease Metabolomics Consortium, Justin B. Miller

Sanders-Brown Center on Aging Faculty Publications

The Alzheimer’s Disease Neuroimaging Initiative (ADNI) contains extensive patient measurements (e.g., magnetic resonance imaging [MRI], biometrics, RNA expression, etc.) from Alzheimer’s disease (AD) cases and controls that have recently been used by machine learning algorithms to evaluate AD onset and progression. While using a variety of biomarkers is essential to AD research, highly correlated input features can significantly decrease machine learning model generalizability and performance. Additionally, redundant features unnecessarily increase computational time and resources necessary to train predictive models. Therefore, we used 49,288 biomarkers and 793,600 extracted MRI features to assess feature correlation within the ADNI dataset to determine the …

Recent Advances And Trends Of Predictive Maintenance From Data-Driven Machine Prognostics Perspective, Yuxin Wen, Md. Fashiar Rahman, Honglun Xu, Tzu-Liang Bill Tseng

Engineering Faculty Articles and Research

In the Engineering discipline, prognostics play an essential role in improving system safety, reliability and enabling predictive maintenance decision-making. Due to the adoption of emerging sensing techniques and big data analytics tools, data-driven prognostic approaches are gaining popularity. This paper aims to deliver an extensive review of recent advances and trends of data-driven machine prognostics, with a focus on their applications in practice. The primary purpose of this review is to categorize existing literature and report the latest research progress and directions to support researchers and practitioners in acquiring a clear comprehension of the subject area. This paper first summarizes …

Data Mining Cubes For Buildings, A Generic Framework For Multidimensional Analytics Of Building Performance Data, Julien Leprince, Clayton Miller, Wim Zeiler

Research Collection College of Integrative Studies

Over the last decade, collecting massive volumes of data has been made all the more accessible, pushing the building sector to embrace data mining as a powerful tool for harvesting the potential of big data analytics. However repetitive challenges still persist emerging from the need for a common analytical frame, effective application- and insight-driven targeted data selection, as well as benchmarked-supported claims. This study addresses these concerns by putting forward a generic stepwise multidimensional data mining framework tailored to building data, leveraging the dimensional-structures of data cubes. Using the open Building Data Genome Project 2 set, composed of 3053 energy …

Deep Learning Approach For Screening Autism Spectrum Disorder In Children With Facial Images And Analysis Of Ethnoracial Factors In Model Development And Application, Angelina Lu, Marek Perkowski

Electrical and Computer Engineering Faculty Publications and Presentations

Autism spectrum disorder (ASD) is a developmental disability that can cause significant social, communication, and behavioral challenges. Early intervention for children with ASD can help to improve their intellectual ability and reduces autistic symptoms. Multiple clinical researches have suggested that facial phenotypic differences exist between ASD children and typically developing (TD) children. In this research, we propose a practical ASD screening solution using facial images through applying VGG16 transfer learning-based deep learning to a unique ASD dataset of clinically diagnosed children that we collected. Our model produced a 95% classification accuracy and 0.95 F1-score. The only other reported study using …

Searching Extreme Mechanical Properties Using Active Machine Learning And Density Functional Theory, Joshua Ojih

Theses and Dissertations

Materials with extreme mechanical properties leads to future technological advancements. However, discovery of these materials is non-trivial. The use of machine learning (ML) techniques and density functional theory (DFT) calculation for structure properties prediction has helped to the discovery of novel materials over the past decade. ML techniques are highly efficient, but less accurate and density functional theory (DFT) calculation is highly accurate, but less efficient. We proposed a technique to combine ML methods and DFT calculations in discovering new materials with desired properties. This combination improves the search for materials because it combines the efficiency of ML and the …

Nonlinear Intelligent Model Predictive Control Of Mobile Robots, Benjamin Albia

Theses and Dissertations

This thesis presents a framework for an artificial neural network (ANN) model-based nonlinear model predictive control of mobile ground robots. A computer vision analysis module was first developed to extract quantitative position information from onboard camera feed with respect to a prescribed path. Various strategies were developed to construct nonlinear physical plant models for model predictive control (MPC), including the physics-based model (PBM), the ANN trained on PBM-generated data, the ANN trained on test-captured data, and the ANN initially trained on PBM-generated data and then retrained with captured data. All the models predict physical states and positions of the robot …

Predicting Pavement Structural Condition Using Machine Learning Methods, Nazmus Sakib Ahmed

Theses and Dissertations

State departments of transportation recognize the need to incorporate pavement structural condition in their pavement performance models and/or decision processes used to select candidate projects for preservation, rehabilitation, or reconstruction at the network level. However, pavement structural condition data are costly to obtain. To this end, this paper develops and evaluates the effectiveness of two machine learning methods, Random Forest (RF) and eXtreme Gradient Boosting (XGBoost), for predicting a flexible pavement’s structural condition. The aim is to be able to predict whether a pavement section’s structural condition is poor or not based on Annual Average Daily Traffic (AADT), truck percentage, …

Automatic Identification And Monitoring Of Plant Diseases Using Unmanned Aerial Vehicles: A Review, Krishna Neupane, Fulya Baysal-Gurel

Agricultural and Environmental Sciences Faculty Research

Disease diagnosis is one of the major tasks for increasing food production in agriculture. Although precision agriculture (PA) takes less time and provides a more precise application of agricultural activities, the detection of disease using an Unmanned Aerial System (UAS) is a challenging task. Several Unmanned Aerial Vehicles (UAVs) and sensors have been used for this purpose. The UAVs’ platforms and their peripherals have their own limitations in accurately diagnosing plant diseases. Several types of image processing software are available for vignetting and orthorectification. The training and validation of datasets are important characteristics of data analysis. Currently, different algorithms and …

Short-Term Crash Risk Prediction Considering Proactive, Reactive, And Driver Behavior Factors, Sina Darban Khales

Dissertations

Providing a safe and efficient transportation system is the primary goal of transportation engineering and planning. Highway crashes are among the most significant challenges to achieving this goal. They result in significant societal toll reflected in numerous fatalities, personal injuries, property damage, and traffic congestion. To that end, much attention has been given to predictive models of crash occurrence and severity. Most of these models are reactive: they use the data about crashes that have occurred in the past to identify the significant crash factors, crash hot-spots and crash-prone roadway locations, analyze and select the most effective countermeasures for reducing …

Gradient Free Sign Activation Zero One Loss Neural Networks For Adversarially Robust Classification, Yunzhe Xue

Dissertations

The zero-one loss function is less sensitive to outliers than convex surrogate losses such as hinge and cross-entropy. However, as a non-convex function, it has a large number of local minima, andits undifferentiable attribute makes it impossible to use backpropagation, a method widely used in training current state-of-the-art neural networks. When zero-one loss is applied to deep neural networks, the entire training process becomes challenging. On the other hand, a massive non-unique solution probably also brings different decision boundaries when optimizing zero-one loss, making it possible to fight against transferable adversarial examples, which is a common weakness in deep learning …

Towards Adversarial Robustness With 01 Lossmodels, And Novel Convolutional Neural Netsystems For Ultrasound Images, Meiyan Xie

Dissertations

This dissertation investigates adversarial robustness with 01 loss models and a novel convolutional neural net systems for vascular ultrasound images.

In the first part, the dissertation presents stochastic coordinate descent for 01 loss and its sensitivity to adversarial attacks. The study here suggests that 01 loss may be more resilient to adversarial attacks than the hinge loss and further work is required.

In the second part, this dissertation proposes sign activation network with a novel gradient-free stochastic coordinate descent algorithm and its ensembling model. The study here finds that the ensembling model gives a high minimum distortion (as measured by …