Engineering Commons^™

Domain-Specific Graph Rag Pipelines: Optimized Approaches For Building Efficient Personal Knowledge Repositories, Omkar Yadav

Master's Projects

Managing personal data, including notes, calendar events, to-do lists, and other personal information, has become increasingly complex and challenging. In response to this issue, I propose a framework using RAG that enables a large language model (LLM) to efficiently query this data without requiring training on the personal data itself. Conventional retrieval systems, including those leveraging vector-based retrievalaugmented generation (RAG), are effective at handling basic queries but struggle to deliver coherent global abstractions, integrate diverse knowledge sources, and account for temporal nuances. This research explores domain-specific Graph based RAG frameworks that incorporate a knowledge graph to better model relationships, thereby …

Enhancing Recommender Systems Using Graph Neural Networks, Long Short-Term Memory And Textual Embeddings, Tianxiang Chen

Master's Projects

Recommender systems surround us. They shape what we watch, how we buy, and even what our future might look like next. The Amazon Review Dataset and Movielens, those two datasets will help this project explore how to improve recommender systems through the user’s preferences. Two methods were combined: sequence-based models and graph-based models. Sequence models, such as LSTMs and Transformers, look at the order of user actions to find patterns by their sequence. On the other hand, Graphbased models focus on relationships between users, items, and their attributes. Textual embeddings added depth and context. Both methods offer something special, according …

Optimizing Integrated Access And Backhaul Topology Using Monte Carlo Tree Search, Srimanth Reddy Ummenthala

Master's Projects

Integrated Access and Backhaul (IAB) plays a central role in enabling scalability and high-throughput in wireless networks, especially in areas where wired backhaul is not feasible. Optimizing the topology of IAB networks is a complex task, involving trade-offs between path loss, node capacity, and link quality. To address this, this project investigates a Monte Carlo Tree Search (MCTS)-based approach to improve overall network performance by maximizing the capacity of network, considering Signal-to-Noise Ratio (SNR) on wireless links. MCTS provides a guided search mechanism to construct topologies efficiently under the constraints and is evaluated against baseline topologies. Experimental results show that …

Secured Data Storage Management With Deduplication In Cloud Computing And Local Gpt Integration, Pavan Myana

Master's Projects

Exponential growth in cloud computing has brought enormous changes in data storage and processing, but also raised several questions on the security, privacy, and efficient storage of data. This report provides a dual-focused approach toward solving these challenges. First, we try to build an application securely and efficiently using data deduplication and Proxy Re-Encryption for optimization of storage and enabling secure data sharing. Deduplication ensures that redundant data is removed before encryption for maximum efficiency in storage, while PRE enables the safe sharing of encrypted data by re-encrypting the keys for specified recipients without the leakage of sensitive information. We …

Performance Comparison Of Machine Learning Across Metal, Cuda, And Neuromorphic Frameworks, Ryan Saini

Master's Projects

Machine learning’s computational demands necessitate optimal performance and utilization. This research compares Apple Silicon M3 Pro with MPS, NVIDIA RTX 3070 GPU with CUDA, and neuromorphic computing for machine learning methods. We provide a cross-platform and cross-architecture performance analysis of machine learning methods to identify optimal configurations for training and inference scenarios. On traditional neural networks, Apple Silicon with MPS delivers superior energy efficiency at the cost of longer processing times for training and inference. NVIDIA with CUDA offers faster computation in training and inference at higher energy costs. Convolutional spiking neural networks perform competitively on event-based data, particularly on …

Evorgcn: Harnessing Esm-2 Evolutionary Embeddings With Relational Gcns For High-Fidelity Protein-Protein Interaction Prediction, Mohit Kunder

Master's Projects

Accurately predicting protein-protein interactions (PPIs) is essential for understanding cellular function and advancing biomedical discovery. We model PPIs as graphs, where nodes represent proteins and edges denote interactions. Using interaction data from the STRING database, we use two samples of it, namely the benchmark datasets—SH27K and SH148K—filtered by confidence score and annotated by interaction mode (multiple relations). In this project, we present EvoRGCN, a graph-based machine learning framework for PPI prediction that integrates both sequence-level (ESM-2 embeddings) and network-level information. We incorporate various Graph Neural Network architectures, including Graph Convolutional Networks, Graph Attention Networks, and Relational Graph Convolutional Networks. Our …

Synthetic Malware Generation Using Generative Ai, Phanidhar Sai Sravan Chandana

Master's Projects

Malware grows in numbers and complexity, evading conventional signature-and anomaly-based defenses and worsening extreme data sparsity and class imbalance problems for machine learning based detection. Generative models, specifically GANs conditioned on contextual embeddings like BERT have proved effective augmenting training corpora to improve classifier accuracy, but these approaches have largely produced family-specific samples In this paper, we propose a generalized augmentation scheme for generating robust malware embeddings for various families. We begin by extracting opcode sequences from 13 malware families and encoding them into three embedding methods: CountVectorizer, TF-IDF, and BERT’s ‘[CLS]‘ vectors. We therefore train standard GANs and Wasserstein …

Malware Opcode Embedding And Quality Assessment Of Generative Sample Embeddings, Atishay Jain

Master's Projects

Malware is software used to damage and disrupt computer systems with the intent to cause damage to the victim. Malware detection and classification into malware families is a crucial problem for cybersecurity researchers. One of the major bottlenecks in improving these systems is the shortage of good quality labeled malware data, especially for malware families with scarce samples. Researchers have utilized generative models to generate malware data to address this issue. Malware embeddings encode patterns within a malware file, which can be used to detect and classify malware. Recently, encouraging results have been obtained in generating malware embeddings using generative …

Malware Generation And Classification Using Pixelcnn, Mounika Krishna Teja Karumudi

Master's Projects

Malware poses a serious threat to both data privacy and system security. With the wide variety of malware families and the surge in cyber-attacks, the accurate classification of malware is crucial for building effective detection and prevention systems. In recent years, deep learning (DL) methods in computer vision have shown promise in classifying malware by converting malware files into visual representations and applying DL algorithms to classify the resulting images. Among the different approaches to malware family classification, image-based methods have gained significant interest. This research focuses on leveraging DL techniques for image-based classification of malware. The success of identifying …

Enhancing Robustness Of Cnn Model For Malware Detection Using Gan-Based Data Augmentation And Transfer Learning, Milind Anand Pathak

Master's Projects

Malware classification is a critical component in the field of cybersecurity. Accurate identification of a malware family can enable timely threat detection and response. In this thesis, we propose a robust image-based malware classification pipeline using Convolutional Neural Networks (CNNs) and Generative Adversarial Networks (GANs), with a focus on improving performance for underrepresented malware families. We train a baseline CNN model on the Malimg dataset across 25 malware families, but observe misclassifications in classes with limited data and overlapping visual features. To address this, we apply targeted augmentations and generate class-specific synthetic data using StyleGAN2-ADA. A CNN trained on the …

Comparative Analysis Of Adversarial Permeability In Cpu-Native, Qat And Onnx-Based Quantized Transformer Models, Fahad Siddiqui

Master's Projects

This work explores securing and optimization of Transformer-based time series forecasting models. We employ several quantization techniques, including quantization-aware training (QAT), and tested the robustness of quantized models by adversarially attacking them. The preliminary results of this work, in our controlled setup, indicate that quantized models outperform the full precision model in terms of robustness against adversarial attacks. They achieved this robustness while showing a very minimal decrease in their forecasting performance.

Human Vs. Llm: Interpreting Emotion From Neutral Faces In Contextually Charged Backgrounds, Sai Mounika Peteti

Master's Projects

In this study, we investigate the intersection of cultural context, visual perception, and implicit bias in interpreting neutral human expressions. Specifically, we explore how emotionally charged backgrounds can shape viewers interpretations of neutral facial expressions. Using an experimental setup, participants are shown neutral human portraits paired with varying background types ranging from emotionally neutral or pleasant to evocative scenes. Participants are tasked with selecting which background best matches the emotional state of the person depicted in the portraits. Eye-tracking data is collected to analyze visual attention patterns and cognitive processing. In parallel, we also evaluate how large language models (LLMs) …

Clustering Organ Cell Types, Venkata Satya Swathi Mattaparthi

Master's Projects

The Human Cell Atlas (HCA) created a reference map of all human cells. My project uses the Tabula Sapiens dataset, developed under HCA and based on single-cell RNA sequencing data, to explore cell type and tissue diversity. I performed experiments using the Elbow method and a formula based on dataset observations to determine the number of clusters, then applied k-means clustering on two representative subsets of the All Cells dataset. Clusters were selected for analysis using Shannon’s Diversity Index and Pielou’s Evenness. A novel algorithm based on the cell differentiation tree was used to validate the biological coherence of the …

Large Language Models For Bacterial Genomic Analysis, Manvendra Chavan

Master's Projects

Identification of bacterial gene sequences with agricultural applications has the potential to transform agricultural biotechnology. These genes can be used in environmentally friendly pest control strategies. One such use case is identifying genes with potential insecticidal properties. With an increasing number of genomic information and decreasing numbers of available annotated sequences, finding new insecticidal genes has become more challenging.The traditional methods relying on sequence alignment and annotated databases are not effective in detecting functionally relevant genes lacking close homology to known cases. This project investigates the data-driven classification of genes by sequence modeling. This research is focused on learning DNA …

Genegate: Genetic Gating In A Mixture-Of-Experts For Real-Time Multi-Objective Traffic Signal Control, Rashmi Vishwanath Bhat

Master's Projects

Urban traffic signal control often needs to juggle between competing goals. It needs to minimize delays, reduce emissions, prevent crashes, and prioritize emergency vehicles all while the demand is constantly fluctuating. Traditional fixed-time or statically blended policies cannot reallocate priorities quickly when conditions change. We introduce GeneGate, a mixture-of-experts framework that uses a lightweight genetic gate to fuse four specialist controllers (throughput, emissions, safety, emergency) and adjusts their weights in real time. A short offline genetic search produces a robust initial blend, and an online micro-evolution step refines it every few cycles based on live traffic feedback. GeneGate’s adaptive gating …

Advanced Knowledge Extraction With Biomedical Data Using Llms, Akshat Krishna

Master's Projects

The rapid growth of biomedical research has led to an overwhelming volume of unstructured textual data in the scientific literature. This has necessitated the development of an automated approach for knowledge extraction and integration. In

this project, we present a comprehensive pipeline for constructing a unified biomed- ical knowledge graph by combining two well-known datasets: CHEMPROT [1],

which captures chemical–protein interactions, and EU-ADR [2], which annotates drug–gene–disease relationships. In order to identify important biomedical entities and interactions from CHEMPROT dataset, we perform Named Entity Recognition (NER) and relation Extraction (RE) using state-of-the-art biomedical models like BioBERT [3], BioGPT [4] and …

Enhancing Code Review Automation With Large Language Models Using Qlora Fine-Tuning And Rags, Sumukh Naveen Aradhya

Master's Projects

In this technological era where Artificial Intelligence and Machine Learning are revolutionizing various domains, Large Language Models (LLMs) are emerging as a very powerful tool. In the software development lifecycle, it is extremely important to have reliable code reviews to ensure security and maintain code quality. This project aims to survey various existing methodologies to aid creation of efficient code review automation agents and also research on ways to make this process more efficient. Parameter Efficient Fine-Tuning (PEFT) methodologies such as LoRA and QLoRA have been explored with an additional focus on a hybrid model that combines adaptive QLoRA with …

Bot Detection In Social Media Using Graphsage And Bert, Abhishek Deshmukh

Master's Projects

This project details a novel bot detection system developed to battle the ever- changing challenge of disinformation, misinformation, and other bot-generated content.

The methodology employed in this project combines the text-based analytical strength of BERT (Bidirectional Encoder Representations from Transformers) with the strength of GraphSage (Graph Sample and Aggregation) for analyzing network structures. The project concatenates BERT and GraphSage vectors to create an 896-size feature embedding with a rich blend of network and text features. This project employs a Support Vector Machine to process the concatenated embeddings, as SVM works well with high-dimensional data. This project was evaluated on two …

Ai Powered Legal Decision Support System, Alisha Rath

Master's Projects

The large volume of legal cases presented by judicial professionals has made it
challenging to study and predict results. With advances in research methods and
technology, predicting law cases in a more accurate manner has become an important
trend. Prediction tools based on AI may help manage a large number of legislative
texts and documents that cannot possibly be fully read, reduce the number of cases
to be seen, and give accurate outcomes of how cases may turn out. Now, when
we look into the current AI legal prediction tools in this domain, they mostly lack
efficiency and interpretability, the …

Multimodal Feature Fusion And Machine Learning For Adhd Detection Using Neuroimaging Data, Isabel Pham

Master's Projects

Attention Deficit Hyperactivity Disorder (ADHD) is a common neurodevelopment disorder that can significantly affect a person’s attention, impulse control, and executive function. Currently, the traditional diagnosis method often relies on clinical assessments and observations. However, these methods can be subjective and lead to inconsistencies in diagnosis between individuals. To address this challenge, neuroimaging and machine learning (ML) are promising tools for providing a more objective diagnosis of ADHD. The goal of this project is to apply a multimodal approach in which structural and functional features of specific regions of the brain are used to develop a more accurate and objective …

Retrieval-Augmented Generation (Rag) Chatbots: A Comparative Study Of Claude, Gpt-4o, Deepseek, And Llama, Kalindi Vijesh Parekh

Master's Projects

The use of Retrieval-augmented generation (RAG) in chatbot platforms has transformed academic spaces by significantly improving information accessibility. RAG has become a viable approach to upgrading Large Language Models (LLMs) with external knowledge access in real time. With the growing availability of advanced LLMs such as GPT, DeepSeek, Claude, Gemini, and Llama, there is a growing need to compare RAG systems based on different LLMs. This study compares the responses of four different RAG chatbots using popular LLMs against a uniquely designed evaluation dataset. Specifically, the study compares the responses and performance of closed-source (GPT-4o and Claude) and open-source models …

Social Engineering Scenario Generation For Awareness-Based Attack Resilience, Jade Webb

Master's Projects

Social engineering is found in a strong majority of cyberattacks today, as it is a powerful manipulation tactic that does not require the technical skills of hacking. Calculated social engineers utilize simple communication to deceive and exploit their victims, all by capitalizing on the vulnerabilities of human nature: trust and fear. When successful, this inconspicuous technique can lead to millions of dollars in losses. Social engineering is not a one-dimensional technique; criminals often leverage a combination of strategies to craft a robust yet subtle attack. In addition, offenders are continually evolving their methods in efforts to surpass preventive measures. A …

Cca Analysis Using Computer Vision Techniques, Rahul Thakur

Master's Projects

Coral reefs are an essential part of the marine ecosystem. They perform a wide variety of tasks, some directly and others indirectly. They can produce oxygen, absorb carbon dioxide, along with supporting ocean habitat. Crustose Coralline Algae (“CCA”) plays an important role in helping provide structural support to Coral Reef ecosystems. However, global warming is causing ocean water to become more acidic resulting in coral bleaching. This is leading to changes in coral environments and causing coral deaths at alarming rates. Object detection using computer vision techniques, specifically deep learning, can help to monitor coral reef health and identify CCA …

Mitigating Cold Start Problem Through Metadata Integration And User Preference Analysis, Prabaljit Walia

Master's Projects

Recommendation systems power the most popular platforms in the world: from content catalogs on Netflix to custom feeds on TikTok – the importance of recommendation systems is significant. Collaborative filtering, the most popular recommendation technique, is essentially based on the idea of leveraging collective user intelligence i.e., creating recommendations by finding similar users. But this technique suffers when there is not enough data in the profiles of users, formally termed as the cold start problem. This research focuses on this problem by introducing an approach that integrates metadata-driven similarity measures with profile expansion techniques. Our approach combines traditional collaborative filtering …

Coral Vision – Crustose Coralline Algae Detection With Computer Vision, Ryan Tseng

Master's Projects

Crustose coralline algae (CCA) are a group of red algae that are vital contributors to the health of coral reef ecosystems. Monitoring CCA abundance can serve as an indicator for coral reef health and improve reef conservation efforts. Autonomous Reef Monitoring Structures (ARMS) are artificial structures that can be deployed into coral reef ecosystems and retrieved to gather ecological data without harming reef structures. Traditional methods of calculating CCA abundance require manual analysis and are labor-intensive. Recent developments in computer vision and deep learning technology have provided an avenue to fully automate this task. This research aims to train a …

Ai-Enabled Anticipatory Handover Predictions In 5g Networks, Ojas Ankush Naik

Master's Projects

As users move across network cells in 5G, it is critical to maintain seamless connectivity through efficient and fast handovers. However, as 5G networks have a very dense deployment of cells and higher carrier frequencies, handovers are often more frequent and challenging, leading to failures or the ping-pong effect. In this research, we are going to use Artificial Intelligence (AI) techniques to enable predicting handover(HO) events proactively as opposed to reactively, aiming to reduce HO failures and unnecessary handovers. We develop Long-Short-Term Memory (LSTM) and Bidirectional LSTM (Bi-LSTM) models to forecast future signal measurements, predict handover trigger points, and compare …

Machine Learning Based Network Traffic Classification With Cosine-Similarity Based Out-Of-Distribution Detection, Prabhat Edupuganti

Master's Projects

The changes occurring in the amount of encrypted network traffic is growing at an alarming rate. This development has created intricate problems in traffic classification which is vital for effective cybersecurity. Moreover, most frameworks seem to ignore OOD detection, model calibration and novel pattern detection as cornerstone problem areas. The due analysis is presented as a machine learning approach aimed at resolving encrypted traffic classification issues and focuses on novel OOD detection and calibration issues. Primary contributions comprise detection of out-of-distribution states using softmax scaled cosine similarity, advanced variance-based feature elimination, and lowering ECE using stringent NNs. This work demonstrates …

Landslide Prediction Using Time-Series Decomposition, Reinforcement Learning-Based Feature Selection And Ml Models, Mohith Sai Venkat Ankem

Master's Projects

Landslides pose significant risks to human life, the community, and the environment, yet their prediction remains a complex and unexplored challenge. Existing prediction models often rely on surface measurements and satellite images, neglecting the critical role, in providing deeper insights into landslide analysis. The literature review highlights a lack of research in time series decomposition techniques, despite their potential to improve prediction accuracy. Similarly, feature selection methods that enhance model robustness and precision have not been adequately addressed. This study presents a novel approach to predicting landslide displacement by combining feature selection through reinforcement learning techniques with advanced time-series machine …

Adaptive Cobot Interaction Via Smartwatch Data Fusion For Car Assembly Automation, Riddhik Tilawat

Master's Projects

In modern car manufacturing, collaborative robots (cobots) work with human operators during shared workcell interactions to maximize production speed and flexibility. Collaboration between humans and robots is safe and effective only when operator intent recognition via a single wrist-worn inertial measurement unit (IMU) is accurate and low-latency. This thesis develops an IMU-only intent recognition pipeline, and is evaluated on three datasets: the public OPPORTUNITY dataset, the Sony Smartwatch Gesture dataset and a custom Samsung Galaxy watch 6 dataset. The proposed framework leverages five step sequence-to-label problems which are stepwise posed as data streams transforming raw IMU data into trainable tensors. …

Real-Time Adaptive Framework For Topic Modeling In Social Engineering Attacks, Manav Bhasin

Master's Projects

Detecting social engineering attempts is crucial for security, as these threats are becoming more frequent and increasingly exploit human vulnerabilities. This research focuses on topic modeling using conversational data from Kevin Mitnick’s ”The Art of Deception” with dialogues that illustrate various social engineering strategies. The dataset comprises manually extracted and synthetically augmented conversations to ensure natural dialogue flow. Two methodologies are presented for utterance-level and global topic extraction: prompt engineering leveraging OpenAI’s GPT-4o-mini, characterized by few-shot learning and chain-of-thought prompting, and Quantized Low Rank Adaptation (QLoRA) utilizing Mistral’s 7B instruct model for efficient fine-tuning. Through experimentation and evaluation, this study …