Engineering Commons^™

Fast Segmentation And High-Quality Three-Dimensional Volume Mesh Creation From Medical Images For Diffuse Optical Tomography, Michael Jermyn, Hamid Ghadyani, Michael A. Mastanduno, Wes Turner, Scott C. Davis, Hamid Dehghani, Brian W. Pogue

Dartmouth Scholarship

Multimodal approaches that combine near-infrared (NIR) and conventional imaging modalities have been shown to improve optical parameter estimation dramatically and thus represent a prevailing trend in NIR imaging. These approaches typically involve applying anatomical templates from magnetic resonance imaging/computed tomography/ultrasound images to guide the recovery of optical parameters. However, merging these data sets using current technology requires multiple software packages, substantial expertise, significant time-commitment, and often results in unacceptably poor mesh quality for optical image reconstruction, a reality that represents a significant roadblock for translational research of multimodal NIR imaging. This work addresses these challenges directly by introducing automated digital …

Metal-Based Nanoparticle Interactions With The Nervous System: The Challenge Of Brain Entry And The Risk Of Retention In The Organism, Robert A. Yokel, Eric A. Grulke, Robert C. Macphail

Pharmaceutical Sciences Faculty Publications

This review of metal-based nanoparticles focuses on factors influencing their distribution into the nervous system, evidence they enter brain parenchyma, and nervous system responses. Gold is emphasized as a model metal-based nanoparticle and for risk assessment in the companion review. The anatomy and physiology of the nervous system, basics of colloid chemistry, and environmental factors that influence what cells see are reviewed to provide background on the biological, physical–chemical, and internal milieu factors that influence nervous system nanoparticle uptake. The results of literature searches reveal little nanoparticle research included the nervous system, which about equally involved in vitro and in …

Compliant Head Probe For Positioning Electroencephalography Electrodes And Near-Infrared Spectroscopy Optodes, Paolo Giacometti, Solomon G. Diamond

Dartmouth Scholarship

A noninvasive head probe that combines near-infrared spectroscopy (NIRS) and electroencephalography (EEG) for simultaneous measurement of neural dynamics and hemodynamics in the brain is presented. It is composed of a compliant expandable mechanism that accommodates a wide range of head size variation and an elastomeric web that maintains uniform sensor contact pressure on the scalp as the mechanism expands and contracts. The design is intended to help maximize optical and electrical coupling and to maintain stability during head movement. Positioning electrodes at the inion, nasion, central, and preauricular fiducial locations mechanically shapes the probe to place 64 NIRS optodes and …

Rat Brain Pro-Oxidant Effects Of Peripherally Administered 5 Nm Ceria 30 Days After Exposure, Sarita S. Hardas, Rukhsana Sultana, Govind Warrier, Mo Dan, Rebecca L. Florence, Peng Wu, Eric A. Grulke, Michael T. Tseng, Jason M. Unrine, Uschi M. Graham, Robert A. Yokel, D. Allan Butterfield

Chemistry Faculty Publications

The objective of this study was to determine the residual pro-or anti-oxidant effects in rat brain 30 days after systemic administration of a 5 nm citrate-stabilized ceria dispersion. A ∼4% aqueous ceria dispersion was iv-infused (0 or 85 mg/kg) into rats which were terminated 30 days later. Ceria concentration, localization, and chemical speciation in the brain was assessed by inductively coupled plasma mass spectrometry (ICP-MS), light and electron microscopy (EM), and electron energy loss spectroscopy (EELS), respectively. Pro- or anti-oxidant effects were evaluated by measuring levels of protein carbonyls (PC), 3-nitrotyrosine (3NT), and protein-bound-4-hydroxy-2-trans-nonenal (HNE) in the hippocampus, cortex, and …

Brain-Related Chronic Pain Disorder Diagnosis And Assessment Method, Jeffrey Hargrove

Mechanical Engineering Patents

A method for diagnosing and assessing a brain-related chronic pain disorder. The method includes assessing a subject's brain function, deterrnining the probability that a subject is suffering from chronic pain as a result of an abnormal brain function condition by obtaining a quantitative assessment of the subject's brain function, and making a statistical comparison between the subject's quantitative brain function assessment and either a database of quantitative assessments of the brain functions of normal, healthy individuals, or a database of quantitative assessments of the brain functions of individuals known to have been suffering from chronic pain as a result of …

Design And Analysis Of Blast Induced Traumatic Brain Injury Mechanism Using A Surrogate Headform: Instrumentation And Outcomes, Eyitejumade A. Sogbesan

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

Brain injury cases in military personnel exposed to improvised explosive devices (IED) in combat have been on the rise. In Iraq and Afghanistan improved helmets and body armor are not enough protection against blast wave threats. The United States military are sponsoring researchers and scientists around the globe to find the associations between pressure waves and traumatic brain injury (TBI).

Lack of accurate data and blast wave exposure information in returning soldiers has slowed the innovation needed to effectively diagnose TBI and other related brain injury as a result of pressure waves. More detailed data will be required to gain …

Hierarchical Anatomical Brain Networks For Mci Prediction: Revisiting Volumetric Measures, Luping Zhou, Yaping Wang, Yang Li, Pew-Thian Yap, Dinggang Shen, Alzheimers Disease Neuroimaging Initiative (Adni)

Faculty of Engineering and Information Sciences - Papers: Part A

Owning to its clinical accessibility, T1-weighted MRI (Magnetic Resonance Imaging) has been extensively studied in the past decades for prediction of Alzheimer's disease (AD) and mild cognitive impairment (MCI). The volumes of gray matter (GM), white matter (WM) and cerebrospinal fluid (CSF) are the most commonly used measurements, resulting in many successful applications. It has been widely observed that disease-induced structural changes may not occur at isolated spots, but in several inter-related regions. Therefore, for better characterization of brain pathology, we propose in this paper a means to extract inter-regional correlation based features from local volumetric measurements. Specifically, our approach …

Hierarchical Anatomical Brain Networks For Mci Prediction By Partial Least Square Analysis, Luping Zhou, Yaping Wang, Yang Li, Pew-Thian Yap, Dinggang Shen

Faculty of Engineering and Information Sciences - Papers: Part A

Owning to its clinical accessibility, T1-weighted MRI has been extensively studied for the prediction of mild cognitive impairment (MCI) and Alzheimer's disease (AD). The tissue volumes of GM, WM and CSF are the most commonly used measures for MCI and AD prediction. We note that disease-induced structural changes may not happen at isolated spots, but in several inter-related regions. Therefore, in this paper we propose to directly extract the inter-region connectivity based features for MCI prediction. This involves constructing a brain network for each subject, with each node representing an ROI and each edge representing regional interactions. This network is …

Visualizing The Correlation Between Human Brain Structure And Function, Douglas Hamilton

Summer Research

In order to help neuroscience researchers better investigate correlations between human brain structure and function, three visualization techniques were implemented in an existing neuroscience investigation software tool. These techniques aimed to produce effective visualizations of gray matter and white matter in the same virtual scene. The three techniques were: 1) wireframe rendering of the gray matter 2) multiple views of separate data sets with linked vantage point and 3) abstraction of white matter pathways drawn as arcs going outside the gray matter.

Dynamic Response Of Brain Subjected To Blast Loadings: Influence Of Frequency Ranges, Mehdi S. Chafi, Shailesh G. Ganpule, Linxia Gu, Namas Chandra

Department of Mechanical and Materials Engineering: Faculty Publications

Blast wave induced a frequency spectrum and large deformation of the brain tissue. In this study, new material parameters for the brain material are determined from the experimental data pertaining to these large strain amplitudes and wide frequencies ranging (from 0.01 Hz to 10 MHz) using genetic algorithms. Both hyperelastic and viscoelastic behavior of the brain are implemented into 2D finite element models and the dynamic responses of brain are evaluated. The head, composed of triple layers of the skull, including two cortical layers and a middle dipole sponge-like layer, the dura, cerebrospinal fluid (CSF), the pia mater and the …

Prediction Of Brain Tumor Progression Using Multiple Histogram Matched Mri Scans, Debrup Banerjee, Loc Tran, Jiang Li, Yuzhong Shen, Frederic Mckenzie, Jihong Wang, Ronald M. Summers (Ed.), Bram Van Ginneken (Ed.)

Electrical & Computer Engineering Faculty Publications

In a recent study [1], we investigated the feasibility of predicting brain tumor progression based on multiple MRI series and we tested our methods on seven patients' MRI images scanned at three consecutive visits A, B and C. Experimental results showed that it is feasible to predict tumor progression from visit A to visit C using a model trained by the information from visit A to visit B. However, the trained model failed when we tried to predict tumor progression from visit B to visit C, though it is clinically more important. Upon a closer look at the MRI scans …

Alterations In Multiple Measures Of White Matter Integrity In Normal Women At High Risk For Alzheimer's Disease, Brian T. Gold, David K. Powell, Anders H. Andersen, Charles D. Smith

Neuroscience Faculty Publications

There is evidence that disruption of white matter (WM) microstructure is an early event in the course of Alzheimer's disease (AD). However, the neurobiological bases of WM microstructural declines in presymptomatic AD are unknown. In the present study we address this issue using a multimodal imaging approach to the study of presymptomatic AD. Participants were 37 high-risk (both family history of dementia and one or more APOE4 alleles) women and 20 low-risk (neither family history nor APOE4) women. Groups were matched for age, education, neuropsychological performance, and vascular factors that could affect white matter. Whole-brain analyses of diffusion tensor imaging …

A New Biomechanical Head Injury Criterion, Charles F. Babbs

Weldon School of Biomedical Engineering Faculty Publications

This paper presents a new analysis of the physics of closed head injury caused by intense acceleration of the head. At rest a 1 cm gap filled with cerebrospinal fluid (CSF) separates the human brain from the skull. During impact whole head acceleration induces artificial gravity within the skull. Because its density differs slightly from that of CSF, the brain accelerates, strikes the inner aspect of the rigid skull, and undergoes viscoelastic deformation. Analytical methods for a lumped parameter model of the brain predict internal brain motions that correlate well with published high-speed photographic studies. The same methods predict a …

Biomechanics Of Heading A Soccer Ball: Implications For Player Safety, Charles F. Babbs

Weldon School of Biomedical Engineering Faculty Publications

To better understand the risk and safety of heading a soccer ball, the author created a set of simple mathematical models based upon Newton’s second law of motion to describe the physics of heading. These models describe the player, the ball, the flight of the ball before impact, the motion of the head and ball during impact, and the effects of all of these upon the intensity and the duration of acceleration of the head. The calculated head accelerations were compared to those during presumably safe daily activities of jumping, dancing, and head nodding and also were related to established …

Regional Blood Flow During Cardiopulmonary Resuscitation With Abdominal Counterpulsation In Dogs, William D. Voorhees Iii, Sandra H. Ralston, Charles F. Babbs

Weldon School of Biomedical Engineering Faculty Publications

The addition of abdominal counterpulsation to standard cardiopulmonary resuscitation (IAC-CPR) during ventricular fibrillation has been shown to improve cardiac output, oxygen uptake, and central arterial blood pressure in dogs. The present study was performed to determine the effect of IAC-CPR on regional blood flow. Regional blood flow was measured with radioactively labeled microspheres during sinus rhythm and during alternate periods of IAC-CPR and standard CPR (STD-CPR) in nine dogs anesthetized with pentobarbital. Blood pressures and oxygen uptake were measured continuously. As in previous studies, diastolic arterial pressure was higher (30.8%) during IAC-CPR than during STD-CPR, as were cardiac output (24.5%) …