Engineering Commons^™

Energy Issues Affecting Corn/Soybean Systems: Challenges For Sustainable Production, Douglas L. Karlen, David Archer, Adam Liska, Seth Meyer

Adam Liska Papers

Quantifying energy issues associated with agricultural systems, even for a two-crop corn (Zea mays L.) and soybean (Glycine max [L.] Merr.) rotation, is not a simple task. It becomes even more complicated if the goal is to include all aspects of sustainability (i.e., economic, environmental, and social). This Issue Paper examines energy issues associated with and affecting corn/soybean rotations by first defining the size of the system from both a U.S. and global perspective and then establishing boundaries based on the Farm Bill definition of sustainability. This structured approach is essential to help quantify energy issues within corn/soybean …

Mononuclear Phagocyte Intercellular Crosstalk Facilitates Transmission Of Cell-Targeted Nanoformulated Antiretroviral Drugs To Human Brain Endothelial Cells, Georgette D. Kanmogne, Sangya Singh, Upal Roy, Xinming Liu, Joellyn Mcmillan, Santhi Gorantla, Shantanu Balkundi, Nathan Smith, Yazen Alnouti, Nagsen Gautam, You Zhou, Larisa Poluektova, Alexander Kabanov, Tatiana Bronich, Howard Gendelman

Nebraska Center for Biotechnology: Faculty and Staff Publications

Despite the successes of antiretroviral therapy (ART), HIV-associated neurocognitive disorders remain prevalent in infected people. This is due, in part, to incomplete ART penetration across the blood–brain barrier (BBB) and lymph nodes and to the establishment of viral sanctuaries within the central nervous system. In efforts to improve ART delivery, our laboratories developed a macrophage-carriage system for nanoformulated crystalline ART (nanoART) (atazanavir, ritonavir, indinavir, and efavirenz). We demonstrate that nanoART transfer from mononuclear phagocytes (MP) to human brain microvascular endothelial cells (HBMEC) can be realized through cell-to-cell contacts, which can facilitate drug passage across the BBB. Coculturing of donor MP …

Magic From Human Regenerative Technologies -- Stem Cells, John M. Ritz

STEMPS Faculty Publications

The article discusses the developments in stem cell research and development. It mentions that through tissue engineering or regenerative medicine, many diseases are finding techniques for improvement and cure. It discusses the role of stem cells in mending the human body and the ethics associated with this technology . It is mentioned that stem cells are divided in 2 types: embryonic stem cells and adult stem cells. It includes the process of cell differentiation which determines the properties and characteristics of cells. It mentions several diseases related to sports injury, spinal cord injuries, blood and heart disorders to be to …

Subsurface Phosphorus Transport And Scale Dependent Phosphorus Leaching In Alluvial Floodplains, Derek Michael Heeren

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Increased nutrient loads have resulted in several adverse impacts on surface water quality, including excessive algal growth, fish kills, and drinking water taste and odor issues across the United States and especially in the Ozark ecoregion of northeastern Oklahoma and northwestern Arkansas. Nitrogen is a concern, but phosphorus (P) is generally considered the limiting nutrient in most surface water systems. Scientists and engineers need to identify critical nutrient source areas and transport mechanisms within a catchment in order to cost effectively protect and enhance drinking water systems, recreation activities, and aquatic ecosystems. While surface runoff is considered to be the …

Chemotaxis Of Drosophila Glia With Controlled Microenvironments, Cade Beck

Dissertations and Theses

No abstract provided.

Neural Correlates Of Phantom Auditory Perception, Paul Joseph S. Deguzman

Dissertations and Theses

No abstract provided.

The Role Of Rugose, A Drosophila Akap And Loco, A Rgs Protein In Synaptogenesis And Development, Kemeh Georgina

Dissertations and Theses

No abstract provided.

Development Of A Human Lung Cancer Cytochrome C-Gfp Reporter Cell Line To Study Anti-Cancer Drug Responses In Apoptosis Pathways, Sidra A Piracha

Dissertations and Theses

"Currently chemotherapy and radiotherapy are the most popular methods for cancer treatments after surgery, but lack of specificity and are thus toxic to the healthy human cells. Studies have shown that targeted therapies have been linked to activation of apoptosis signal pathways (cascade of caspases) in cancer cells including intrinsic and extrinsic pathways. One of the major pathways leading to caspase activation involves the release of cytochrome-c from mitochondria. However, in some tumor cells this pathway is inactivated due to the mutation of mitochondria membrane stabilizing proteins (e.g. Bcl-2, Bcl-xL). Therefore, the overall objective of this proposal was to understand …

Technologya Nd Protocolsf Or Translational Researchin Electricals Timulation, Asif Rahman

Dissertations and Theses

"Noninvasive electrical stimulation techniques like transcranial direct currents stimulation (tDCS) have been demonstrated to modulate neural function. Weak constant current is applied via scalp electrodes leading to subthreshold changes in neuron membrane potentials. Neuromodulation of the cortex using direct current (DC) stimulation may be a viable treatment for neurological disorders, enhancing cognitive function as well as facilitating neural plasticity. Theoretically, tDCS can employ many electrodes montages to emphasize directionality, focality, or intensity (Datta 2008, 2009, Dmochowski 2011) but what remains unclear is how these parameters influence cortical neurons considering their orientation and the local synaptic circuit in the region of …

Characterization Of Rheological Properties And Degradation Of Genipin Crosslinked Fibrin Hydrogel For Annulus Repair, Dave Khyati

Dissertations and Theses

No abstract provided.

Effects Of Mild Heating On The Osteogenic Differentiation Of Human Mesenchymal Stem Cells During Inflammation, Kristifor Sunderic

Dissertations and Theses

"Current surgical procedures to treat osteoarthritis have varying degrees of success, but carry inherent risks and a finite life expectancy. A more permanent solution is a treatment that regenerates biologically viable tissue that integrates with the patient and retains functionality. For maximal effectiveness, such a treatment should also repair bone loss known to occur in osteoarthritis and attenuate chronic inflammation that can obstruct healing. Mesenchymal stem cells have great potential to be used as part of a novel therapy for bone and cartilage regeneration. They are a highly regulated, self-renewing population of cells with potent mechanisms to avoid allogeneic rejection, …

Life-Cycle Optimization And Flow Control In A Nickel-Zinc Flow Assisted Battery, Steve Lever

Dissertations and Theses

Nickel-Zinc flow-assisted rechargeable batteries are currently being explored as a potential new generation of large-scale, low-cost energy storage devices. The viability of a commercial nickel-zinc battery has been hindered by the well-known phenomena of dendrite formation and zinc morphology variation over time. Applying electrolyte flow to traditional nickel-zinc battery systems has demonstrated significant life cycle performance improvements by reducing both dendrite formation and morphological variation. It has also been demonstrated that periodic low-current reconditioning discharge further improves cycle life. This thesis examines the effect of eliminating electrolyte flow during discharge of nickel-zinc flow assisted batteries, which would allow a much …

Feasibility Analysis Of Estrification Systems With Entrainers, Kang Wook Lee

Dissertations and Theses

(Ethyl Acetate) and IPA (Isopropyl Acetate) production systems are studied in terms of the feasibility analysis. It is not feasible to retrieve pure products by a simple reactive distillation for IPA production system because CCR (Critical Composition Region) covers the entire desired binary edge for IPA system. On the other hand, even though CCR does not cover the entire desired binary edge of the EA system completely, internal reflux ratio (IRR) analysis does not allow the production of the pure product via reactive distillation for EA production system. To overcome the restraints, external entrainers are utilized to take advantage of …

Assessing The Therapeutic Effect Of 630 Nm Light-Emitting Diodes Irradiation On The Recovery Of Exercise-Induced Hand Muscle Fatigue With Surface Electromyogram, Dandan Yang, Xiaoying Wu, Wensheng Hou, Xiaolin Zheng, Jun Zheng, Yingtao Jiang

Electrical & Computer Engineering Faculty Research

This paper aims to investigate the effect of light emitting diode therapy (LEDT) on exercise-induced hand muscle fatigue by measuring the surface electromyography (sEMG) of flexor digitorum superficialis. Ten healthy volunteers were randomly placed in the equal sized LEDT group and control group. All subjects performed a sustained fatiguing isometric contraction with the combination of four fingertips except thumb at 30% of maximal voluntary contraction (MVC) until exhaustion. The active LEDT or an identical passive rest therapy was then applied to flexor digitorum superficialis. Each subject was required to perform a re-fatigue task immediately after therapy which was the same …

Computational Analysis Of Hybrid Norwood Circulation With Distal Aortic Arch Obstruction And Reverse Blalock-Taussig Shunt, Andres Ceballos, I. Ricardo Argueta-Morales, Eduardo Divo, Ruben Osorio, Christopher A. Caldarone, Alain J. Kassab, William M. Decampli

Mechanical Engineering - Daytona Beach

BACKGROUND: The hemodynamics characteristics of the hybrid Norwood (HN) procedure differ from those of the conventional Norwood and are not fully understood. We present a multi-scale model of HN circulation to understand local hemodynamics and effects of aortic arch stenosis and a reverse Blalock-Taussig shunt (RBTS) on coronary and carotid perfusion. METHODS: Four 3-dimensional models of four HN anatomic variants were developed, with and without 90% distal preductal arch stenosis and with and without a 4-mm RBTS. A lumped parameter model of the circulation was coupled to a local 3-dimensional computational fluid dynamics model. Outputs from the lumped parameter model …

Computational Fluid Dynamics In Congenital Heart Disease, William M. Decampli, I. Ricardo Argueta-Morales, Eduardo Divo, Alain J. Kassab

Mechanical Engineering - Daytona Beach

Computational fluid dynamics has been applied to the design, refinement, and assessment of surgical procedures and medical devices. This tool calculates flow patterns and pressure changes within a virtual model of the cardiovascular system. In the field of paediatric cardiac surgery, computational fluid dynamics is being used to elucidate the optimal approach to staged reconstruction of specific defects and study the haemodynamics of the resulting anatomical configurations after reconstructive or palliative surgery. In this paper, we review the techniques and principal findings of computational fluid dynamics studies as applied to a few representative forms of congenital heart disease.

Bifunctional Bisphosphonates For Delivering Biomolecules To Bone, Jivan N. Yewle

Theses and Dissertations--Chemistry

Active targeting with controlled delivery of therapeutic agents to bone is an ideal approach for treatment of several bone diseases. Since bisphosphonates (BPs) are known to have high affinity to bone mineral and are being widely used in treatment of osteoporosis, they are well-suited for drug targeting to bone. For this purpose, bifunctional hydrazine-bisphosphonates (HBPs) with spacers of various lengths and lipophilicity were synthesized and studied. Crystal growth inhibition assays demonstrated that the HBPs with shorter spacers bound more strongly to bone mineral, hydroxyapatite (HA), than did alendronate. HBPs were also demonstrated to be non-toxic to MC3T3-E1 pre-osteoblasts. The targeted …

Protein Based Biomimetic Approachs To Surface Hemocompatibility And Biocompatibility Enhancement, Matthew Thomas Dickerson

Theses and Dissertations--Chemical and Materials Engineering

T. pallidum can survive a primary immune response and continue growing in the host for an extended period of time. T. pallidum is thought to bind serum fibronectin (FN) through Tp0483 on the surface to obscure antigens. A Tp0483 fragment (rTp0483) was adsorbed onto functionalized self-assembled monolayers (SAMs) with FN. FN capture by adsorbed rTp0483 depended greatly on surface chemistry with COO- groups being best for FN binding. Hemocompatibility was determined by analysis of plasma protein adsorption, intrinsic pathway activation, and platelet activation. rTp0483+FN bound an equal or lesser amount of fibrinogen (Fg), human serum albumin (HSA), and factor XII …

Anchoring Of Drifting Spiral And Scroll Waves To Impermeable Inclusions In Excitable Media, Christian W. Zemlin, Arkady M. Pertsov

Bioelectrics Publications

Anchoring of spiral and scroll waves in excitable media has attracted considerable interest in the context of cardiac arrhythmias. Here, by bombarding inclusions with drifting spiral and scroll waves, we explore the forces exerted by inclusions onto an approaching spiral and derive the equations of motion governing spiral dynamics in the vicinity of inclusion. We demonstrate that these forces nonmonotonically depend on distance and can lead to complex behavior: (a) anchoring to small but circumnavigating larger inclusions; (b) chirality-dependent anchoring.

A Preliminary Study On The Potential Of Manuka Honey And Platelet-Rich Plasma In Wound Healing, Scott A. Sell, Patricia S. Wolfe, Andrew J. Spence, Isaac A. Rodriguez, Jennifer M. Mccoll, Rebecca L. Petrella, Koyal Garg, Jeffery J. Ericksen, Gary L. Bowlin

Ellmer School of Nursing Faculty Publications

Aim. The purpose of this study was to determine the in vitro response of cells critical to the wound healing process in culture media supplemented with a lyophilized preparation rich in growth factors (PRGF) and Manuka honey. Materials and Methods. This study utilized cell culture media supplemented with PRGF, as well as whole Manuka honey and the medical-grade Medihoney (MH), a Manuka honey product. The response of human fibroblasts (hDF), macrophages, and endothelial cells (hPMEC) was evaluated, with respect to cell proliferation, chemotaxis, collagen matrix production, and angiogenic potential, when subjected to culture with media containing PRGF, MH, Manuka honey, …

Regeneration Of Electrospun Bioresorbable Vascular Grafts: A Phenomenon Associated With Vascular Graft Properties And Macrophage Phenotypes (M1/M2), Koyal Garg

Theses and Dissertations

Macrophages (MФ) and mast cells are important cell types in the context of tissue remodeling and regeneration. Mast cells participate in the early stages of wound healing and modulate the acute inflammatory responses to biomaterials. Mast cells can secrete a myriad of different cytokines by the process of degranulation; the process of regulated secretion in which preformed contents stored in their granules are rapidly released by exocytosis. Some of these cytokines such as IL-4, IL-13 and TNF-α can modulate the MФ phenotype. Macrophages (MΦ) are innate immune cells, crucial for tissue homeostasis, presentation of foreign and self-antigens following infection/injury, pathogen …

Cell Adhesion And Migration On Ndga Cross-Linked Fibrillar Collagen Matrices For Tendon Tissue Engineering, Ana Ysabel Rioja

USF Tampa Graduate Theses and Dissertations

Tendons, essential tissues that connect muscles to bones, are susceptible to rupture/degeneration due to their continuous use for enabling movement. Often surgical intervention is required to repair the tendon; relieving the pain and fixing the limited mobility that occurs from the damage. Unfortunately, post-surgery immobilization techniques required to restore tendon properties frequently lead to scar formation and reduced tendon range of motion. Our ultimate goal is to create an optimal tendon prosthetic that can stabilize the damaged muscle-bone connection and then be remodeled by resident cells from the surrounding tissues over time to ensure long-term function. To achieve this, we …

Shape-Shifting Surfaces For Rapid Release And Direct Stamping Of Organized Micro-Tissues, Samuel James Dupont

USF Tampa Graduate Theses and Dissertations

The primary aim of the research in this study is to develop a robust and simple platform for the in vitro organization of cells on surfaces which facilitate rapid cell release and allows for the direct stamping of highly organized micro-tissues. Current approaches towards this goal have been very successful but are lengthy and subject cells to harsh conditions for extended periods of time raising questions regarding cell health and maintenance of physiological state. To address these concerns a platform was developed to allow for rapid cell release by utilizing a release mechanism different from previous work.

Micron-scale structures comprised …

Upper Extremity Kinematics In Children With Spinal Cord Injury During Wheelchair Mobility, Brooke Slavens, Alyssa Paul, Adam Graf, Joseph Krzak, Lawrence Vogel, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Foot And Ankle Motion Analysis Using Dynamic Radiographic (Fluoroscopic) Imaging, Benjamin Mchenry, Jason T. Long, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Segmental Kinematic Assessment Of Pediatric Pes Planovalgus With Radiographic Skeletal Indexing, Katherine A. Konop, Jason T. Long, Joseph Krzak, Adam Graf, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Assessing Spinal Motion At Different Fusion Levels In Adolescents With Idiopathic Scoliosis, Sahar Hassani, Adam Graf, Joseph Krzak, K. Hammerberg, P. Sturm, P. Gupta, M. Riordan, Gerald F. Harris

Biomedical Engineering Faculty Research and Publications

No abstract provided.

Mathematical Model Development Of Super-Resolution Image Wiener Restoration, Amr H. Yousef, Jiang Li, Mohammad A. Karim

Electrical & Computer Engineering Faculty Publications

In super-resolution (SR), a set of degraded low-resolution (LR) images are used to reconstruct a higher-resolution image that suffers from acquisition degradations. One way to boost SR images visual quality is to use restoration filters to remove reconstructed images artifacts. We propose an efficient method to optimally allocate the LR pixels on the high-resolution grid and introduce a mathematical derivation of a stochastic Wiener filter. It relies on the continuous-discrete-continuous model and is constrained by the periodic and nonperiodic interrelationships between the different frequency components of the proposed SR system. We analyze an end-to-end model and formulate the Wiener filter …

Fast Stochastic Wiener Filter For Super-Resolution Image Restoration With Information Theoretic Visual Quality Assessment, Amr Hussein Yousef, Jiang Li, Mohammad Karim, Mark Allen Neifeld (Ed.), Amit Ashok (Ed.)

Electrical & Computer Engineering Faculty Publications

Super-resolution (SR) refers to reconstructing a single high resolution (HR) image from a set of subsampled, blurred and noisy low resolution (LR) images. The reconstructed image suffers from degradations such as blur, aliasing, photo-detector noise and registration and fusion error. Wiener filter can be used to remove artifacts and enhance the visual quality of the reconstructed images. In this paper, we introduce a new fast stochastic Wiener filter for SR reconstruction and restoration that can be implemented efficiently in the frequency domain. Our derivation depends on the continuous-discrete-continuous (CDC) model that represents most of the degradations encountered during the image-gathering …

Methamphetamine Administration Targets Multiple Immune Subsets And Induces Phenotypic Alterations Suggestive Of Immunosuppression., Robert Z. Harms, Brenda M. Morsey, Craig W. Boyer, Howard S. Fox, Nora E. Sarvetnick

Journal Articles: Regenerative Medicine

Methamphetamine (Meth) is a widely abused stimulant and its users are at increased risk for multiple infectious diseases. To determine the impact of meth on the immune system, we utilized a murine model that simulates the process of meth consumption in a typical addict. Our phenotypic analysis of leukocytes from this dose escalation model revealed that meth affected key immune subsets. Meth administration led to a decrease in abundance of natural killer (NK) cells and the remaining NK cells possessed a phenotype suggesting reduced responsiveness. Dendritic cells (DCs) and Gr-1(high) monocytes/macrophages were also decreased in abundance while Gr-1(low) monocytes/macrophages appear …