Engineering Commons^™

Air Wear, Ani M. Svadjian, Ada A. Tadeo, Deepthi Ravuru

General Engineering

Since the outbreak of COVID-19 pandemic, hospitals have experienced an overwhelming increase in patients needing respiratory assistance. Our client identified the need for a sustainable, affordable, and portable outpatient device that will provide supplemental oxygen and assisted breathing to speed up the patient recovery process. Our team accomplished to design a device that contains a more sustainable oxygen supply method, has a longer functional duration, is safer and ergonomic, as well as compact.

Modeling And Simulating Brain Damage From Football Helmet Impacts, Tate Russell Fonville

Doctoral Dissertations and Projects

The objective of this research was to present a model for brain damage to investigate the head’s response to mechanical loadings. A Finite Element (FE) head and brain mesh used throughout this dissertation was constructed from Magnetic Resonance Imaging (MRI) scan data of one of the authors and validated in previous research. A computational modal analysis was first conducted on the whole head and an isolated brain to identify the resonant frequencies, mode shapes, and locations. A physics-based Internal State Variable (ISV) constitutive model for polymers was modified to include damage in the form of pore growth. The brain damage …

Novel Neurostimulation-Based Haptic Feedback Platform For Grasp Interactions With Virtual Objects, Aliyah K. Shell, Andres E. Pena, James J. Abbas, Ranu Jung

Biomedical Engineering Faculty Publications and Presentations

Haptic perception is a vital part of the human experience that enriches our engagement with the world, but the ability to provide haptic information in virtual reality (VR) environments is limited. Neurostimulation-based sensory feedback has the potential to enhance the immersive experience within VR environments by supplying relevant and intuitive haptic feedback related to interactions with virtual objects. Such feedback may contribute to an increase in the sense of presence and realism in VR and may contribute to the improvement of virtual reality simulations for future VR applications. This work developed and evaluated xTouch, a neuro-haptic platform that extends the …

Comparison Of Performance Of Self-Expanding And Balloon-Expandable Transcatheter Aortic Valves, Hoda Hatoum, Milad Samaee, Janarthanan Sathananthan, Stephanie Sellers, Maximilian Kuetting, Scott M. Lilly, Abdul R. Ihdayhid, Philipp Blanke, Jonathon Leipsic, Vinod H. Thourani, Lakshmi Prasad Dasi

Michigan Tech Publications, Part 1

Objective: To evaluate the flow dynamics of self-expanding and balloon-expandable transcatheter aortic valves pertaining to turbulence and pressure recovery. Transcatheter aortic valves are characterized by different designs that have different valve performance and outcomes. Methods: Assessment of transcatheter aortic valves was performed using self-expanding devices (26-mm Evolut [Medtronic], 23-mm Allegra [New Valve Technologies], and small Acurate neo [Boston Scientific]) and a balloon-expandable device (23-mm Sapien 3 [Edwards Lifesciences]). Particle image velocimetry assessed the flow downstream. A Millar catheter was used for pressure recovery calculation. Velocity, Reynolds shear stresses, viscous shear stress, and pressure gradients were calculated. Results: The maximal velocity …

Functional Analysis Of The Cortical Transcriptome And Proteome Reveal Neurogenesis, Inflammation, And Cell Death After Repeated Traumatic Brain Injury In Vivo, Celeste Dunn, Lais A. Ferreira, Sara M. Venier, Syed F. Ali, Jeffery Wolchok, Kartik Balachandran

Biomedical Engineering Faculty Publications and Presentations

The pathological effects of repeated traumatic brain injuries (TBIs) are largely unknown. To gain a detailed understanding of the cortical tissue acute biological response after one or two TBIs, we utilized RNA-sequencing and protein mass spectrometry techniques. Using our previously validated C57Bl/6 weight-drop model, we administered one or two TBIs of a mild or moderate severity. Double injury conditions were spaced 7 days apart, and cortical tissue was isolated 24 h after final injury. Analysis was carried out through functional gene annotation, utilizing Gene Ontology, for both the proteome and transcriptome. Major themes across the four different conditions include: neurogenesis; …

Hepatic Artery Flow, Inspired Oxygen, And Hemoglobin Determine Liver Tissue Saturation Measured With Visible Diffuse Reflectance Spectroscopy (Vis-Drs) In An In Vivo Swine Model, Stylianos Voulgarelis, Faraneh Fathi, Bing Yu, Barbara Palkovic, Nikolaos A. Chatzizacharias, Kenneth P. Allen, Astrid G. Stucke

Biomedical Engineering Faculty Research and Publications

Background

Prompt diagnosis of vascular compromise following pediatric liver transplantation and restoration of oxygen delivery to the liver improves organ survival. vis-DRS allows for real-time measurement of liver tissue saturation.

Methods

The current study used vis-DRS to determine changes in liver saturation during clinically relevant conditions of reduced oxygen delivery. In an in vivo swine model (n = 15), we determined liver tissue saturation (S_tO₂) during stepwise reduction in hepatic artery flow, different inspiratory oxygen fraction (FiO₂), and increasing hemodilution. A custom vis-DRS probe was placed directly on the organ.

Results

Liver tissue …

Staphylococcus Aureus Sortase A Protein Applications And Methods: (1) Drug Discovery In Anti-Infectious Agents; (2) A Biotechnique Analysis For Indication Sortase A Protein Purification Methods; (3) In Vivo Protein Ligation For Discovery Of Novel Protein Engineering Methods:, Melina Huang Xia

Bioengineering Master's Theses

It has been understood that during Gram-positive bacterial infection, the bacterial cells interact with host mammalian cells via the virulence factors whose anchorage onto the bacterial surface are mainly catalysed by Sortase A[2]. Emergence of antibiotic-resistant bacterial strains, especially the Gram-positive bacteria, has rendered the rise of many antibiotic resistant bacteria, resulting in rise of infection cases that bypass traditional first-line antibiotics treatments. It is crucial for the public health that scientists and researchers discover an alternative treatment for the bacterial infection that targets the underlying pathogenic mechanism that are responsible for the increased virulence of such bacteria without contributing …

Improving The Performance And Evaluation Of Computer-Assisted Semen Analysis, Ji-Won Choi

Dissertations

Semen analysis is performed routinely in fertility clinics to analyze the quality of semen and sperm cells of male patients. The analysis is typically performed by trained technicians or by Computer-Assisted Semen Analysis (CASA) systems. Manual semen analysis performed by technicians is subjective, time-consuming, and laborious, and yet most fertility clinics perform semen analysis in this manner. CASA systems, which are designed to perform the same tasks automatically, have a considerable market share, yet many studies still express concerns about their accuracy and consistency. In this dissertation, the focus is on detection, tracking, and classification of sperm cells in semen …

Assessing Structural And Functional Brain Alterations And Work-Related Fatigue In Non-Hyposmic And Hyposmic Covid-19 Survivors, Rakibul Hafiz

Dissertations

In the year 2019, life began to change at the advent of a global pandemic caused by the novel coronavirus. Mask mandates and mass vaccinations have mitigated the effects significantly, yet cases keep rising with new variants, especially, in densely populated countries, like India. Recent neuroimaging evidence shows the virus can attack the central nervous system (CNS). However, exactly which brain regions undergo structural and functional changes remain largely unknown. Many patients experience 'loss of/reduced sense of smell' (i.e., hyposmic) and an alarming number of survivors develop persistent symptoms ('long-COVID') for several months after initial infection. Fatigue is the most …

Design Of Self-Assembled Peptides For Wound Healing, Ka-Kyung Kim

Dissertations

According to the CDC, 15% of diabetic patients develop diabetic foot ulcers (DFU) and approximately 170,000 patients undergo non-traumatic amputation annually. DFU is a major complication of diabetes caused by non-healing full-thickness wounds through the dermis. The current treatments include blood sugar control, frequent debridement, offloading, moist wound care, infection treatment, and amputation. To achieve wound closure of DFU, appropriate wound care and antibiotic therapy are essential. Topical regimens include hydrocolloids, alginates, foam, silver-impregnated dressings, and hydrogels. Wound healing is a complex and dynamic interplay between the immune system, keratinocytes, and dermal cells (in case of cutaneous wound). Angiogenesis has …

The Interconnection Of The Vestibular And Oculomotor Systems Analyzed In Healthy Young Adults By Examining Postural Sway, Cassandra Martin

Theses

In order to study the human brain in a non-invasive way, the vestibular and oculomotor systems have been analyzed simultaneously. To achieve this, an eye movement and balance assessment was conducted for 29 (23 male; 21.6 ± 3.8 years) healthy participants with no history of concussions, brain injuries, vertigo, migraines, brain surgeries, eye surgeries, or amblyopia. The tasks consisted of eyes open, eyes closed, horizontal saccades, vertical saccades, vergence jumps, horizontal vestibulo-ocular reflex (VOR), and vertical VOR. Each task was completed in two stances: feet shoulder width apart and feet together. Distance, velocity, sway area, center of pressure (COP) frequency, …

Degradation Mechanisms Of Zinc-Air Batteries Used In Hearing Aid, Kelly Hunt, Mallorty Bates, Gerard Klint Simon, Tarun Goswami

Biomedical, Industrial & Human Factors Engineering Faculty Publications

Hearing aid devices are powered by the oxidation of zinc that occurs within zinc-air batteries. Zinc-air batteries have an average discharge time of 7 days. Therefore, hearing-aid devices need frequent battery replacement. In this paper, degradation mechanisms of zinc-air batteries investigated where a competition mechanism between zinc passivation and dendritic formation dictates the battery life. This research included exposure time from none to 9 days and to document dendritic growth with time. Scanning electron microscope images were taken to quantify the damage growth as well energy dispersive X-ray tests were conducted to comment on the composition changes. The results confirmed …

Comparison Of Aero Engine Component Lifing Methods, Ashley Whitney-Rawls, Paul Copp, Jace Carter, Tarun Goswami

Biomedical, Industrial & Human Factors Engineering Faculty Publications

Failure of critical engine components such as compressor, fan, and turbine disks during flight can cause the loss of the engine, aircraft, or even life. To reduce the risk of this failure during flight, different methodologies and tools have been developed to determine the safe operating life of these critical disk components. The two most widely used lifing methods, safe-life and damage tolerance, are inherently conservative, retiring all components when a predetermined operating limit is reached. Both methods retire components with theoretical useful life remaining. Additional lifing methods can be used to reduce this conservatism and extend the life of …

Recent Advances In Bone Research 2022 Edition, Jean-Philippe Berteau, Laurent Pujo-Menjouet

Publications and Research

More and more scientific and engineering applications in bone research make pivotal advances in treating patients with orthopedics issues. Hence, bone research in the 21st century combines, inter alia, biology, chemistry, mathematics, and mechanics with complementary characteristics that help a holistic approach to bone-related pathologies. Nowadays, it is hard to connect new evidence when jargoning and money remain two significant obstacles to sharing knowledge. “Recent Advances In Bone Research” is a free book – no money involved at any stage - that combines the most recent efforts in bone research from several experts with different backgrounds, every expert seeks to …

Application Of Neural Networks To Predict Patient-Specific Cellular Parameters In Computational Cardiac Models, Chang Hi Lee

McKelvey School of Engineering Graduate Student Theses & Dissertations

Sudden cardiac death(SCD) is a significant cause of death that accounts for more than 180,000 deaths in the US and 4 million deaths worldwide annually. SCDs are mainly caused by irregular heartbeats called arrhythmias, which are caused by abnormal electrical activity within the heart. Precision medicine, in the form of personalized computational cardiac models of a patient’s heart, can suggest optimal therapies for cardiac arrhythmias. Prior work has used finite element meshes derived from cardiac MRIs to simulate cardiac electrical activity. In this study, I sought to augment this approach by developing a neural network to learn the parameters that …

Active Testing Of Executive Functions: Toward More Efficient And Equitable Individual Behavioral Modeling, Mariluz Rojo Domingo

McKelvey School of Engineering Graduate Student Theses & Dissertations

Inferences about executive functions are commonly drawn through serial administration of various individual assessments that often take a long time to complete and cannot capture complex trends across multiple variables. In an attempt to improve upon current methods used to estimate latent brain constructs, this thesis makes two primary contributions to the field of behavioral modeling. First, it brings attention to sequential designs for more efficient diagnostic testing of fluctuations in executive functions with respect to a baseline level. It was shown that a sequential framework was successfully capable of detecting significant differences in cognitive performance more rapidly than conventional …

Optimal Design Of Bacterial Carpets For Fluid Pumping, Minghao W. Rostami, Weifan Liu, Amy Buchmann, Eva Strawbridge, Longhua Zhao

Biology and Medicine Through Mathematics Conference

No abstract provided.

Human Induced Mesenchymal Stem Cells Display Increased Sensitivity To Matrix Stiffness., Kirstene A Gultian, Roshni Gandhi, Khushi Sarin, Martina Sladkova-Faure, Matthew Zimmer, Giuseppe Maria De Peppo, Sebastian Vega

Henry M. Rowan College of Engineering Departmental Research

The clinical translation of mesenchymal stem cells (MSCs) is limited by population heterogeneity and inconsistent responses to engineered signals. Specifically, the extent in which MSCs respond to mechanical cues varies significantly across MSC lines. Although induced pluripotent stem cells (iPSCs) have recently emerged as a novel cell source for creating highly homogeneous MSC (iMSC) lines, cellular mechanosensing of iMSCs on engineered materials with defined mechanics is not well understood. Here, we tested the mechanosensing properties of three human iMSC lines derived from iPSCs generated using a fully automated platform. Stiffness-driven changes in morphology were comparable between MSCs and iMSCs cultured …

Relationship Between Applied Load And Clearance In Suture Knots, Amena S. Shermadou, Steven R. Lindheim, Jerome L. Yaklic, Tarun Goswami

Biomedical, Industrial & Human Factors Engineering Faculty Publications

Ethicon Coated Vicryl absorbable sutures of different diameters were studied in order to determine if a relationship exists between the load and measured clearance. A prototype was designed to simulate knot location. Tensile tests were conducted on the suture knots followed by clearance measurements after each load level was applied. From the results it was concluded that the measured clearance was directly proportional to the amount of load applied to the suture knot. Also, based on the diameter of the suture, the smaller the diameter, the lower was the total displacement of the knot or the clearance.

Study Of Cardiovascular Dynamics During Graded Head-Up Tilt Test In The Young With Syncope Tendency, Martin A. Miranda Sr

Biology and Medicine Through Mathematics Conference

No abstract provided.

Gender-Specific Anterior Cruciate Ligament – Gait Forces, Bharadwaj Cheruvu, Amy Neidhard-Doll, Tarun Goswami

Biomedical, Industrial & Human Factors Engineering Faculty Publications

The purpose of this study was to investigate gender-based differences in gait biomechanics and to evaluate those effects on forces generated on the ACL during walking. Estimation of gender-specific ACL forces in the frontal plane can provide a better understanding of the biomechanical patterns underlying higher female injury risk. The present study used a sample from the Fels Longitudinal Study to test the hypothesis that there are significant gender-differences in frontal plane ACL loading during walking. A cross-sectional sample of 178 participants, including 79 males and 99 females was used to evaluate differences in gait kinetics. Females walked at higher …

Simulation Of Gene Regulatory Elements For Biosensing, Mallory Bates, Svetlana Harbough, Tarun Goswami

Biomedical, Industrial & Human Factors Engineering Faculty Publications

Gene regulatory studies are of significant importance in many scenarios such as mental illness. 21% of U.S adults experience mental illnesses including 1 in 4 active-duty military personnel. Mental health can be identified in the body by different biomarkers. These biomarkers potentially controlled by riboswitches, which are located in mRNA and switch “ON” or “OFF” depending on the concentration of a biomarker. In this research, a known riboswitch reengineered and its response in the presence of a biomarker investigated. We changed computationally PreQ₁, a known riboswitch that has the smallest aptamer, and then experimentally tested against biomarkers, dehydroepiandrosterone-sulfate …

Shape Memory Polymer Foaming With Tunable Interconnectivity Using Off-The-Shelf Foaming Components, Natalie Marie Petryk

Theses - ALL

The ability to tune pore structures of gas-blown polyurethane shape memory polymer (SMP) foams easily and safely could improve their outcomes as hemostatic dressings or tissue engineering scaffolds and overall commercialization efforts. Incorporating physical blowing agents into the polymer mix can be used to tune pore size and interconnectivity without altering foam chemistry. Enovate (HFC-254fa) is a commonly used physical blowing agent in gas-blown foams, but the Environmental Protection Agency (EPA) considers its use unacceptable because it is a hydrofluorocarbon that contributes to global warming. Here, off-the-shelf solvents accepted for use by the EPA, acetone, dimethyoxymethane (methylal), and methyl formate, …

Aerodynamics And Turbulent Wake-Flow Characteristics Of Owls During Flapping Flight, Krishnamoorthy Krishnan

Electronic Theses and Dissertations

Owls exhibit unique flight capabilities in the low Reynolds number flow regime which is prone to complex viscous flow phenomena. They possess unique feather features and flexible wing structures which are postulated to help them fly nearly silently and stably at low speeds in a complex flow setting. Understanding the aerodynamics of owls could pave the way to enhance the future designs of small flying vehicles. Though it has been a focus of research over multiple decades, no conclusive agreement has been attained on the aerodynamic mechanisms associated with owl flight. Particularly, the aerodynamics of flapping owl flight is severely …

Atomistic Investigation Of Nucleosomal H3 Histone Tail In Unmodified And Epigenetically Modified States, Kathryn Piston

Dissertations - ALL

Epigenetics is a growing area of research that could potentially unlock the understanding of questions like how and why we develop certain diseases, how we age, how we inherit certain traits and even how our species evolves. Epi is a prefix meaning above, referring to chemical tags that sit above your genetics and dictate gene expression. Although there are many known links between certain epigenetic tags and diseases like cancer, the molecular mechanisms behind these links remains elusive. Gaining a novel understanding of the behavior of key biological targets for cancer like the histone H3 tail motivated this work. Histone …

Development Of New, Diverse Triggering Mechanisms Of Shape Memory Polymers For Cell Mechanobiology Studies, Mark Macios

Theses - ALL

Over the past decade, several shape-memory polymer (SMP) substrates capable of changing topography under cell-culture conditions have been developed for the study of cell mechanobiology. Most initial reports of cytocompatible SMP platforms employed thermal triggering under ambient heating conditions, which, especially in hydrated environments, is a slow process that generally takes several minutes to a few hours. Also, biocompatible SMPs initially featured recovery temperatures too high for cells to maintain viability during the thermal trigger. To overcome the limitations of ambient thermal heating triggered shape recovery, the goal of this thesis was to develop new cytocompatible SMPs that can trigger …

Manipulated Electrochemical Surface Reactions Induced By Oscillatory Electric Potentials On Metal Based Electrodes, Thomas Stone Welles

Dissertations - ALL

This research effort investigates the manipulation of surface electrochemical reactions induced by oscillating electric potentials on the surface of metal-based electrodes. Specifically, this research presents experimental data identifying modified electrochemical surface reactions caused by low magnitude electric potential oscillations on multilayered catalytic membranes and on implanted biometallic alloys. The scope of this effort consists of four major components: (1) perform an exhaustive literature review and analysis of the current understanding in applied surface electrochemistry and develop potential theoretical frameworks by which to interpret the experimental results; (2) identify the electrochemical manipulation via electrical oscillation while reacting nitric oxide on a …

Closed-Loop Brain-Computer Interfaces For Memory Restoration Using Deep Brain Stimulation, David Xiaoliang Wang

Electrical Engineering Theses and Dissertations

The past two decades have witnessed the rapid growth of therapeutic brain-computer interfaces (BCI) targeting a diversity of brain dysfunctions. Among many neurosurgical procedures, deep brain stimulation (DBS) with neuromodulation technique has emerged as a fruitful treatment for neurodegenerative disorders such as epilepsy, Parkinson's disease, post-traumatic amnesia, and Alzheimer's disease, as well as neuropsychiatric disorders such as depression, obsessive-compulsive disorder, and schizophrenia. In parallel to the open-loop neuromodulation strategies for neuromotor disorders, recent investigations have demonstrated the superior performance of closed-loop neuromodulation systems for memory-relevant disorders due to the more sophisticated underlying brain circuitry during cognitive processes. Our efforts are …

A Microfluidic Assay For Single Cell Bacterial Adhesion Studies Under Shear Stress, Amanda Trusiak

Electronic Theses and Dissertations

The study of bacterial adhesion to host cells is important in understanding bacterial pathogenesis and developing new therapeutic approaches. Here, we studied bacterial adhesion under shear stress using a novel microfluidic method. Specifically, the adhesion of a uropathogenic E. coli strain (FimHOn, ATCC 700928/CFT073) to mannose-modified substrates was studied under flow conditions. The FimHOn E. coli strain expresses FimH which is a mannose-specific adhesin found on the fimbriae that binds to glycoproteins on the epithelium. We developed a microfluidic method that mimics bacterial adhesion to urothelial cells. First, the microfluidic channels were modified by sequentially adsorbing BSA-mannose and BSA onto …

Investigating The Effect Of Dissolved Oxygen-Assisted Corneal Cross-Linking (Cxl) On Porcine Corneas, Julianni Dar

Electronic Theses and Dissertations

Corneal cross-linking is a clinical procedure that is known to stop the progression of keratoconus, an eye disease that affects the cornea’s structure, ultimately leading to vision loss in its advanced stages. The typical treatment plan includes riboflavin and UV-A exposure in the hope to increase the mechanical properties of the cornea. There are two types of CXL pathways, with Type-II CXL requiring oxygen. Naturally, the dissolved oxygen is limited in the cornea; therefore, limiting the effect of Type-II CXL. This study proposes to improve the Type-II CXL contribution by integrating dissolved oxygen during the standard CXL treatment used in …