Digital Commons Network^™

Identifying Performance Regression From The Commit Phase Utilizing Machine Learning Techniques, Max Mendelson

Theses

Over the lifespan of a software application, it is inevitable that changes to the source code will be made that causes unintended slowdowns in functionality. These slowdowns are referred to as performance regression. Typically projects who are particularly concerned about performance have performance testing that are run to identify if a performance regression is introduced into the code. This is difficult however due to how time consuming and resource intensive running performance tests are when trying to simulate a realistic scenario.

The study of De Oliveira et. al. (Perphecy) [4] suggests a technique to predict the likelihood that a commit …

Behavioral Model Anomaly Detection In Automatic Identification Systems (Ais), Jacob Coleman

Masters Theses and Doctoral Dissertations

Over 90% of all goods in the world, at some point in their life, are on a vessel at sea. Currently, the maritime industry relies on the Automatic Identification System (AIS) for collision avoidance and vessel tracking. AIS is an unencrypted, unauthenticated protocol that is vulnerable to various types of cyber attacks allowing malicious actors to alter the location of vessels. With the advent of the Ocean of Things (OoT), vessels are sharing more information than vessel location alone at sea. Increasingly, more information is becoming critical for safe and efficient operation at sea. This method is a novel approach …

Applications Of Machine Learning In High-Frequency Trade Direction Classification, Jared E. Hansen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The correct assignment of trades as buyer-initiated or seller-initiated is paramount in many quantitative finance studies. Simple decision rule methods have been used for signing trades since many data sets available to researchers do not include the sign of each trade executed. By utilizing these decision rule methods, as well as engineering new variables from available data, we have demonstrated that machine learning models outperform prior methods for accurately signing trades as buys and sells, achieving state-of-the-art results. The best model developed was 4.5 percentage points more accurate than older methods when predicting onto unseen data. Since finance and economics …

Automated Identification Of Libraries From Vulnerability Data, Chen Yang, Andrew Santosa, Asankhaya Sharma, David Lo

Research Collection School Of Computing and Information Systems

Software Composition Analysis (SCA) has gained traction in recent years with a number of commercial offerings from various companies. SCA involves vulnerability curation process where a group of security researchers, using various data sources, populate a database of open-source library vulnerabilities, which is used by a scanner to inform the end users of vulnerable libraries used by their applications. One of the data sources used is the National Vulnerability Database (NVD). The key challenge faced by the security researchers here is in figuring out which libraries are related to each of the reported vulnerability in NVD. In this article, we …

Evaluating Machine Learning Models For Semantic Segmentation Over Cloud Images For Classification, Harsh Nagarkar

Honors Theses

Due to the increasing number of available approaches nowadays, choosing the most accurate image semantic segmentation model has become hard. The purpose of this research is to find the best-performing image semantic segmentation model for Cloud classification. For the purpose of this study, a data set of cloud images from the Max Planck Institute for meteorology is used. These images were taken from the by two NASA space satellite.Three main models UNet, PSPNet and FPN were used in combination of 4 differ-ent encoder Inception-ResNet-v2, MobileNet-v2, ResNet-34, and ResNet 101. After training all the models in the Mississippi Center for Super …

Meaning In The Noise: Neural Signal Variability In Major Depressive Disorder, Sally M. Pessin

Theses

Clinical research has revealed aberrant activity and connectivity in default mode (DMN), frontoparietal (FPN), and salience (SN) network regions in major depressive disorder (MDD). Recent functional magnetic resonance imaging (fMRI) studies suggest that variability in brain activity, or blood oxygen level-dependent (BOLD) signal variability, may be an important novel predictor of psychopathology. However, to our knowledge, no studies have yet determined the relationship between resting-state BOLD signal variability and MDD nor applied BOLD signal variability features to the classification of MDD history using machine learning (ML). Thus, the current study had three aims: (i) to investigate the differences …

Detecting Malicious Websites Using Machine Learning, Saeed Ahmad Al Tamimi

Theses

The growing use of the internet resulted in emerging of new websites every day (Total number of Websites - Internet Live Stats, 2020). Web surfing has become important for everyone regardless of their occupation, age or location. However, as the use of the internet is increasing so is the vulnerability to malware attacks through malicious websites (Softpedia, 2016). Identifying and dealing with such malicious website has been quite difficult in the past as it is quite challenging to separate good websites from bad websites. However, by using machine learning algorithms on large datasets it is now possible to detect such …

Effective Smart Video Survillance And Alertinng, Kranthikumar Putta

Other Student Works

Machine learning models & AI are popular term in past couple of years. Almost every aspect on our daily life we are using these machine learning models & AI knowing or unknowing. The simple statement of this research paper is to prove reduction of human effort in camera surveillance by using machine learning models such as objection detection & facial recognition.

TensorFlow is leading open source tool developed and published by Google helps to build objection detection and facial recognition library. The code we about to develop can allow user to train model with his choice of images of objects …

Shinylearner: A Containerized Benchmarking Tool For Machine-Learning Classification Of Tabular Data, Stephen Piccolo, Terry J. Lee, Erica Suh, Kimball Hill

Faculty Publications

Background: Classification algorithms assign observations to groups based on patterns in data. The machine-learning community have developed myriad classification algorithms, which are used in diverse life science research domains. Algorithm choice can affect classification accuracy dramatically, so it is crucial that researchers optimize the choice of which algorithm(s) to apply in a given research domain on the basis of empirical evidence. In benchmark studies, multiple algorithms are applied to multiple datasets, and the researcher examines overall trends. In addition, the researcher may evaluate multiple hyperparameter combinations for each algorithm and use feature selection to reduce data dimensionality. Although software implementations …

Allosteric Control Of Proteins: New Methods And Mechanisms, Nalvi Duro

USF Tampa Graduate Theses and Dissertations

Allostery describes the phenomenon where perturbations in one region of a protein affect protein behavior in another non-overlapping region. Considerable efforts made over decades to understand the molecular basis of allostery, yet an overarching theory that can predict signaling pathways and contributions from chemical components is still lacking. In fact, molecular details in even the most well-studied of model systems, PDZ domains and GPCRs, remain unclear. In this dissertation I use molecular simulation methods to understand the role of allostery in the regulated entry of paramyxovirus into host cells, and also develop a new method to determine time-dependent signaling pathways …

Atmospheric Contrail Detection With A Deep Learning Algorithm, Nasir Siddiqui

Student Research, Papers, and Creative Works

Aircraft contrail emission is widely believed to be a contributing factor to global climate change. We have used machine learning techniques on images containing contrails in hopes of being able to identify those which contain contrails and those that do not. The developed algorithm processes data on contrail characteristics as captured by long-term image records. Images collected by the United States Deparment of Energy’s Atmospheric Radiation Management user facility(ARM) were used to train a deep convolutional neural network for the purpose of this contrail classification. The neural network model was trained with 1600 images taken by the Total Sky Imager(TSI) …

Stretching Human Laws To Apply To Machines: The Dangers Of A "Colorblind" Computer, Zach Harned, Hanna Wallach

Florida State University Law Review

Automated decision-making has become widespread in recent years, largely due to advances in machine learning. As a result of this trend, machine learning systems are increasingly used to make decisions in high-stakes domains, such as employment or university admissions. The weightiness of these decisions has prompted the realization that, like humans, machines must also comply with the law. But human decision- making processes are quite different from automated decisionmaking processes, which creates a mismatch between laws and the decision makers to which they are intended to apply. In turn, this mismatch can lead to counterproductive outcomes. We take antidiscrimination laws …

High Performance And Machine Learning Algorithms For Brain Fmri Data, Taban Eslami

Dissertations

Brain disorders are very difficult to diagnose for reasons such as overlapping nature of symptoms, individual differences in brain structure, lack of medical tests and unknown causes of some disorders. The current psychiatric diagnostic process is based on behavioral observation and may be prone to misdiagnosis.

Noninvasive brain imaging technologies such as Magnetic Resonance Imaging (MRI) and functional Magnetic Resonance Imaging (fMRI) make the process of understanding the structure and function of the brain easier. Quantitative analysis of brain imaging data using machine learning and data mining techniques can be advantageous not only to increase the accuracy of brain disorder …

Machine Learning-Enabled Resource Allocation For Underlay Cognitive Radio Networks, Fatemeh Shah Mohammadi

Theses

Due to the rapid growth of new wireless communication services and applications, much attention has been directed to frequency spectrum resources and the way they are regulated. Considering that the radio spectrum is a natural limited resource, supporting the ever increasing demands for higher capacity and higher data rates for diverse sets of users, services and applications is a challenging task which requires innovative technologies capable of providing new ways of efficiently exploiting the available radio spectrum. Consequently, dynamic spectrum access (DSA) has been proposed as a replacement for static spectrum allocation policies. The DSA is implemented in three modes …

Applications Of Image Processing Techniques And Spatial Data Analytics For Pressure Mapping Analysis, Joan Yamil Martinez

Dissertations

The technological advancements in sensors, monitoring systems, and tracking devices are changing how we study our environment; big data sets are becoming more and more prevalent due to the increase of information gathered with ease. One system benefiting from these technological improvements is pressure mapping technology, an easy-to-use and cost-effective solution for assessing contact pressure distributions.

Pressure mapping systems generally produce data sets of very large volume, especially when used for continuous tracking and monitoring, and are widely used for research in fields of ergonomics, sports, industries, and health disciplines. Pressure mapping systems are particularly important in the study of …

Integration Of Forecasting, Scheduling, Machine Learning, And Efficiency Improvement Methods Into The Sport Management Industry, Caleb Mcgrady

Senior Honors Theses

Sport management is a complicated and economically impactful industry and involves many crucial decisions: such as which players to retain or release, how many concession vendors to add, how many fans to expect, what teams to schedule, and many others are made each offseason and changed frequently. The task of making such decisions effectively is difficult, but the process can be made easier using methods of industrial and systems engineering (ISE). Integrating methods such as forecasting, scheduling, machine learning, and efficiency improvement from ISE can be revolutionary in helping sports organizations and franchises be consistently successful. Research shows areas including …

Truck Trailer Classification Using Side-Fire Light Detection And Ranging (Lidar) Data, Olcay Sahin

Civil & Environmental Engineering Theses & Dissertations

Classification of vehicles into distinct groups is critical for many applications, including freight and commodity flow modeling, pavement management and design, tolling, air quality monitoring, and intelligent transportation systems. The Federal Highway Administration (FHWA) developed a standardized 13-category vehicle classification ruleset, which meets the needs of many traffic data user applications. However, some applications need high-resolution data for modeling and analysis. For example, the type of commodity being carried must be known in the freight modeling framework. Unfortunately, this information is not available at the state or metropolitan level, or it is expensive to obtain from current resources.

Nevertheless, using …

The Effects Of Mixed-Initiative Visualization Systems On Exploratory Data Analysis, Adam Kern

McKelvey School of Engineering Graduate Student Theses & Dissertations

The main purpose of information visualization is to act as a window between a user and data. Historically, this has been accomplished via a single-agent framework: the only decisionmaker in the relationship between visualization system and analyst is the analyst herself. Yet this framework arose not from first principles, but from necessity: prior to this decade, computers were limited in their decision-making capabilities, especially in the face of large, complex datasets and visualization systems. This thesis aims to present the design and evaluation of a mixed-initiative system that aids the user in handling large, complex datasets and dense visualization systems. …

Paired Trial Classification: A Novel Deep Learning Technique For Mvpa, Jacob M. Williams, Ashok Samal, Prahalada K. Rao, Matthew R, Johnson

School of Computing: Faculty Publications

Many recent developments in machine learning have come from the field of “deep learning,” or the use of advanced neural network architectures and techniques. While these methods have produced state-of-the-art results and dominated research focus in many fields, such as image classification and natural language processing, they have not gained as much ground over standard multivariate pattern analysis (MVPA) techniques in the classification of electroencephalography (EEG) or other human neuroscience datasets. The high dimensionality and large amounts of noise present in EEG data, coupled with the relatively low number of examples (trials) that can be reasonably obtained from a sample …

Does Applying Deep Learning In Financial Sentiment Analysis Lead To Better Classification Performance?, Tao Wang, Changhe Yuan, Cuiyuan Wang

Publications and Research

Using a unique data set from Seeking Alpha, we compare the deep learning approach with traditional machine learning approaches in classifying financial text. We apply the long short-term memory (LSTM) as the deep learning method and Naive Bayes, SVM, Logistic Regression, XGBoost as the traditional machine learning approaches. The results suggest that the LSTM model outperforms the conventional machine learning methods on all metrics. Based on the tSNE graph, the success of the LSTM model is partially explained as the high-accuracy LSTM model distinguishes between positive and negative important sentiment words while those words are chosen based on SHAP values …

Event-Based Visual-Inertial Odometry Using Smart Features, Zachary P. Friedel

Theses and Dissertations

Event-based cameras are a novel type of visual sensor that operate under a unique paradigm, providing asynchronous data on the log-level changes in light intensity for individual pixels. This hardware-level approach to change detection allows these cameras to achieve ultra-wide dynamic range and high temporal resolution. Furthermore, the advent of convolutional neural networks (CNNs) has led to state-of-the-art navigation solutions that now rival or even surpass human engineered algorithms. The advantages offered by event cameras and CNNs make them excellent tools for visual odometry (VO). This document presents the implementation of a CNN trained to detect and describe features within …

Lightning Prediction For Space Launch Using Machine Learning Based Off Of Electric Field Mills And Lightning Detection And Ranging Data, Anson Cheng

Theses and Dissertations

Kennedy Space Center and Cape Canaveral Air Station, FL, where the Air Force conducts space launches, are in an area of frequent lightning strikes, which is main obstacle in meeting launch goals. The 45th Weather Squadron (45th WS) ensures that any weather safety requirements are met during pre-launch and actual space launch. Using only summer months from three years’ worth of lightning detection and ranging (LDAR) and electric field mill (EFM) data from KSC, several feedforward neural networks are constructed. Separate models are built for each EFM and trained by adjusting parameters to forecast lightning 30 minutes out in the …

Knowledge Infused Learning (K-Il): Towards Deep Incorporation Of Knowledge In Deep Learning, Ugur Kursuncu, Manas Gaur, Amit Sheth

Publications

Learning the underlying patterns in data goes beyondinstance-based generalization to external knowledge repre-sented in structured graphs or networks. Deep learning thatprimarily constitutes neural computing stream in AI hasshown significant advances in probabilistically learning la-tent patterns using a multi-layered network of computationalnodes (i.e., neurons/hidden units). Structured knowledge thatunderlies symbolic computing approaches and often supportsreasoning, has also seen significant growth in recent years,in the form of broad-based (e.g., DBPedia, Yago) and do-main, industry or application specific knowledge graphs. Acommon substrate with careful integration of the two willraise opportunities to develop neuro-symbolic learning ap-proaches for AI, where conceptual and probabilistic repre-sentations are combined. …

Detection Of Fish Fillet Substitution And Mislabeling Using Multimode Hyperspectral Imaging Techniques, Jianwei Qin, Fartash Vasefi, Rosalee S. Hellberg, Alireza Akhbardeh, Rachel B. Isaacs, Ayse Gamze Yilmaz, Chansong Hwang, Insuck Baek, Walter F. Schmidt, Moon S. Kim

Food Science Faculty Articles and Research

Substitution of high-priced fish species with inexpensive alternatives and mislabeling frozen-thawed fish fillets as fresh are two important fraudulent practices of concern in the seafood industry. This study aimed to develop multimode hyperspectral imaging techniques to detect substitution and mislabeling of fish fillets. Line-scan hyperspectral images were acquired from fish fillets in four modes, including reflectance in visible and near-infrared (VNIR) region, fluorescence by 365 nm UV excitation, reflectance in short-wave infrared (SWIR) region, and Raman by 785 nm laser excitation. Fish fillets of six species (i.e., red snapper, vermilion snapper, Malabar snapper, summer flounder, white bass, and tilapia) were …

Graph Classification With Kernels, Embeddings And Convolutional Neural Networks, Monica Golahalli Seenappa, Katerina Potika, Petros Potikas

Faculty Publications, Computer Science

In the graph classification problem, given is a family of graphs and a group of different categories, and we aim to classify all the graphs (of the family) into the given categories. Earlier approaches, such as graph kernels and graph embedding techniques have focused on extracting certain features by processing the entire graph. However, real world graphs are complex and noisy and these traditional approaches are computationally intensive. With the introduction of the deep learning framework, there have been numerous attempts to create more efficient classification approaches. We modify a kernel graph convolutional neural network approach, that extracts subgraphs (patches) …

Using Logical Specifications For Multi-Objective Reinforcement Learning, Kolby Nottingham

Undergraduate Honors Theses

In the multi-objective reinforcement learning (MORL) paradigm, the relative importance of environment objectives is often unknown prior to training, so agents must learn to specialize their behavior to optimize different combinations of environment objectives that are specified post-training. These are typically linear combinations, so the agent is effectively parameterized by a weight vector that describes how to balance competing environment objectives. However, we show that behaviors can be successfully specified and learned by much more expressive non-linear logical specifications. We test our agent in several environments with various objectives and show that it can generalize to many never-before-seen specifications.

Machine Learning For Effective Parkinson's Disease Diagnosis, Brennon Brimhall

Undergraduate Honors Theses

Parkinson’s Disease is a degenerative neurological condition that affects approximately 10 million people globally. Because there is currently no cure, there is a strong motivation for research into improved and automated diagnostic procedures. Using Random Forests, a computer can effectively learn to diagnose Parkinson’s disease in a patient with high accuracy (94%), precision (95%), and recall (91%) across the data of over 2800 patients. Using similar techniques, I further determine that the most predictive medical tests relate to tremors observed in patients.

Identifying Viruses From Metagenomic Data Using Deep Learning, Jie Ren, Kai Song, Chao Deng, Nathan A. Ahlgren, Jed A. Fuhrman, Yi Li, Xiaohui Xie, Ryan Poplin, Fengzhu Sun

Biology

Background: The recent development of metagenomic sequencing makes it possible to massively sequence microbial genomes including viral genomes without the need for laboratory culture. Existing reference-based and gene homology-based methods are not efficient in identifying unknown viruses or short viral sequences from metagenomic data. Methods: Here we developed a reference-free and alignment-free machine learning method, DeepVirFinder, for identifying viral sequences in metagenomic data using deep learning. Results: Trained based on sequences from viral RefSeq discovered before May 2015, and evaluated on those discovered after that date, DeepVirFinder outperformed the state-of-the-art method VirFinder at all contig lengths, achieving AUROC 0.93, 0.95, …

Quantitative Analysis Of Evaluation Criteria For Generative Models, Marvin W. Newlin

Theses and Dissertations

Machine Learning (ML) is rapidly becoming integrated in critical aspects of cybersecurity today, particularly in the area of network intrusion/anomaly detection. However, ML techniques require large volumes of data to be effective. The available data is a critical aspect of the ML process for training, classification, and testing purposes. One solution to the problem is to generate synthetic data that is realistic. With the application of ML to this area, one promising application is the use of ML to perform the data generation. With the ability to generate synthetic data comes the need to evaluate the “realness” of the generated …

Automated Detection And Mitigation Of Inefficient Visual Searching Using Electroencephalography And Machine Learning, Joshua P. Gallaher

Theses and Dissertations

Decisions made during the high-stress and fast-paced operations of the military are extremely prone to cognitive biases. A commonly known cognitive bias is a confirmation bias, or the inappropriate bolstering of an unknown hypothesis. One such critical military operation that can fall prey to a confirmation bias is a visual search. During a visual search, a military operator must perform a visual scan of an environment for a specific target. However, the visual search process can fall prey to the same confirmation bias which can cause inefficient searches. This study elicits inefficient visual search patterns and applies various mitigation techniques …