Digital Commons Network^™

Dynamics Of The Benthic Communities Of Pigeon Islets (Guadeloupe Island, Lesser Antilles) From 2012 To 2021 Monitored By A Photo-Quadrats Technique, Hanna-May Malahel, Camille Freschet, Simone Mège, Claude Bouchon

Gulf and Caribbean Research

Since 2012, the benthic communities of the Pigeon Islets (Guadeloupe Island, Lesser Antilles) have been monitored biannually by the National Park of Guadeloupe using photo—quadrats. This monitoring was carried out at 12 coral reef stations distributed around the islets. The data collected from 2012 to 2021 highlight the significant events that disrupted the coral communities of Guadeloupe. Among these remarkable phenomena, an episode of coral bleaching occurred in 2019, followed by the appearance of a new coral disease, Stony Coral Tissue Loss Disease (SCTLD), in 2020. As a result of these threats, a drop of 54% of coral cover was …

Epiphytic Diatom Production On The Seagrass Thalassia Testudinum In Northern Gulf Of Mexico, Jonathan L. Venable, Shayna A. Sura, Jeffrey W. Krause

Gulf and Caribbean Research

No abstract provided.

Authentic Learning Design Failures: The Need For Learner And Contextual Analysis And Participatory Design, Mohan Yang, Jon Harbor

STEMPS Faculty Publications

This design case examines what program leaders learned from failures in the design of a program of authentic learning about teaching diverse audiences through educational outreach. The program was initiated and then redesigned to develop the teaching and communication skills of graduate students from a wide range of backgrounds by engaging them in authentic experiences with middle school teachers and students. Analysis of post-program data revealed seven design failures related to the lack of upfront analysis to inform the program design. Each design failure was detailed through a fishbone diagram method to identify the corre- sponding contributing factors. The failures …

Effect Of Positive Emotion Intervention During Late Pregnancy On Improving Colostrum Secretion: A Randomised Control Trial Protocol, Kechen Xu, Ying Xie, Xiujun Han, Ying Yu, Suqing Liu, Suliu Wu, Qian Yang, Qi Zhang

Community & Environmental Health Faculty Publications

Introduction Though evidence has revealed the beneficial effects of cognitive improvement interventions on breastfeeding, the effect of psychological interventions has rarely been studied. This study aims to test whether promoting a positive emotion intervention, 'Three Good Things' intervention, during the last trimester of pregnancy can enhance early colostrum secretion and breastfeeding behaviours by modulating the hormones associated with lactation (prolactin and insulin-like growth factor I). We will attempt to promote exclusive breastfeeding by using physiological behavioural measures.

Methods and analysis This study is designed as a randomised controlled trial conducted in the Women's Hospital School of Medicine at Zhejiang University …

Experiences With Covid-19 Stress Among Hispanic/Latino Farmworkers, Brenda Berumen-Flucker, Hadiza Galadima, Sylvia Shangani, Michele Kekeh, Muge Akpinar-Elci

Community & Environmental Health Faculty Publications

BACKGROUND: Hispanics/Latinos, particularly those that identify as foreign-born, are overrepresented in the agricultural sector in the U.S. Over the course of the COVID-19 pandemic, this subpopulation of farmworkers was recognized as an invaluable group of essential workers unable to implement COVID-19 protections.

METHODS: Previously validated COVID-19 stress scale measures were identified, adapted, and translated to collect COVID-19 stress data from Hispanic/Latino agricultural workers in two heavily agricultural counties in northeastern North Carolina. Participants were recruited using purposive convenience sampling. Data collection took place from June to November of 2021.

RESULTS: The majority of Hispanic/Latino agricultural workers surveyed reported experiencing worries …

Sound The (Smaller) Alarm: The Triphosphate Magic Spot Nucleotide Pgpp, Areej Malik, Megan A. Hept, Erin B. Purcell

Chemistry & Biochemistry Faculty Publications

It has recently become evident that the bacterial stringent response is regulated by a triphosphate alarmone (pGpp) as well as the canonical tetra- and pentaphosphate alarmones ppGpp and pppGpp [together, (p)ppGpp]. Often dismissed in the past as an artifact or degradation product, pGpp has been confirmed as a deliberate endpoint of multiple synthetic pathways utilizing GMP, (p)ppGpp, or GDP/GTP as precursors. Some early studies concluded that pGpp functionally mimics (p)ppGpp and that its biological role is to make alarmone metabolism less dependent on the guanine energy charge of the cell by allowing GMP-dependent synthesis to continue when GDP/GTP has been …

Thermotrophy Exploratory Study, James Weifu Lee

Chemistry & Biochemistry Faculty Publications

The question of whether environmental heat energy could be utilized as a source of energy for biological metabolism is the center of this exploratory research. In 1979, this author postulated a hypothesis for the existence of thermotrophs that could isothermally utilize environmental heat energy as a source of their energy on Earth. According to this hypothesis, the thermotrophs could be the first primitive forms of life in the early Earth environment. The chemotrophs and phototrophs that we currently are all well familiar with might have been evolved somehow from the primitive thermotrophs. Furthermore, all the organisms currently regarded as the …

Telp Theory: Elucidating The Major Observations Of Rieger Et Al. 2021 In Mitochondria, James Weifu Lee

Chemistry & Biochemistry Faculty Publications

The transmembrane-electrostatically localized protons (TELP) theory may represent a complementary development to Mitchell's chemiosmotic theory. The combination of the two together can now excellently explain the energetics in mitochondria. Our calculated transmembrane-attractive force between an excess proton and an excess hydroxide explains how TELP may stay within a 1-nm thin layer at the liquid-membrane interface. Consequently, any pH sensor (sEcGFP) located at least 2–3 nm away from the membrane surface will not be able to see TELP. This feature as predicted from the TELP model was observed exactly in the experiment of Rieger et al., 2021. In contrast to their …

Detection And Quantification Of Antiviral Drug Tenofovir Using Silver Nanoparticles And Surface Enhanced Raman Spectroscopy (Sers) With Spatially Resolved Hotspot Selection, Marguerite R. Butler, Jana Hrncirova, Terry A. Jacot, Sucharita Dutta, Meredith R. Clark, Gustavo F. Doncel, John B. Cooper

Chemistry & Biochemistry Faculty Publications

This study introduces a convenient and ultra-sensitive method of detection and quantification of the antiviral drug, tenofovir (TFV), by surface-enhanced Raman spectroscopy (SERS). Novel spatially resolved instrumentation for spectral acquisition and subsequent statistical analysis for hot spot selection was developed for convenient quantification of TFV in an aqueous matrix. Methods of statistical analysis include the use of partial least squares (PLS) regression vector analysis and spectral ranking by quality indices computed using CHAOS theory. Hydroxylamine-reduced Ag colloidal nanoparticles evaporated to dryness on an aluminum well-plate were used as the SERS substrate. To our knowledge, quantification of TFV down to 25 …

Odu Department Of English Newsletter (2023-2024 - Issue No. 1), Ola Swatek (Editor), Karma Johnson, Aliya Head

Department of English Newsletter

ODU English Department's 2023-2024 Annual Newsletter. The newsletter covers new courses, events, awards, students & faculty news and much more.

Prevalence Of Gastrointestinal Symptoms Among Autistic Individuals, With And Without Co-Occurring Intellectual Disability, Calliope Holingue, Danika Pfeiffer, Natasha N. Ludwig, Rachel Reetzke, Ji Su Hong, Luther G. Kalb, Rebecca Landa

Communication Disorders & Special Education Faculty Publications

Gastrointestinal symptoms (GI) are very common among individuals on the autism spectrum. Prior research reports mixed findings regarding whether individuals with autism and co-occurring intellectual disability (ID) have elevated risk of gastrointestinal symptoms relative to individuals with autism alone. GI symptoms can be challenging to assess in individuals with autism spectrum disorder (ASD) and/or ID given challenges with language, communication, and interoception. Prior research has tended to only include individuals with documented presence or absence of GI symptoms or conditions, that is, to exclude observations in which there is uncertainty regarding presence of GI symptoms. Therefore, none of the prior …

Editorial: New Frontiers In The Application Of Stable Isotopes To Ecological And Ecophysiological Research, Keith A. Hobson, John P. Whiteman, Seth D. Newsome

Biological Sciences Faculty Publications

No abstract provided.

Use Of Amino Acid Isotope Analysis To Investigate Capital Versus Income Breeding Strategies In Migratory Avian Species, Nico Lübcker, John P. Whiteman, Oliver N. Shipley, Keith A. Hobson, Seth D. Newsome

Biological Sciences Faculty Publications

1. Income and capital breeding represent opposing ends of a continuum of reproductive strategies. Quantifying nutrient allocation to reproduction is challenging, but recent advances in compound-specific stable isotope analysis hold promise for tracing the source of individual compounds allocated to reproduction.

2. Here, we describe a novel approach of using measured carbon (δ13C) and nitrogen (δ15N) isotope values of individual amino acids (AAs) in pectoral muscle of egg-laying females and egg yolk as a useful tool to quantify the reliance on income versus capital breeding in migrating species. We used white-fronted (Anser albifrons frontalis), lesser snow (A. …

The Practice And Promise Of Temporal Genomics For Measuring Evolutionary Responses To Global Change, René D. Clark, Katrina A. Catalano, Kyra S. Fitz, Eric Garcia, Kyle E. Jaynes, Brendan N. Reid, Allyson Sawkins, Anthony A. Snead, John C. Whalen, Malin L. Pinsky

Biological Sciences Faculty Publications

Understanding the evolutionary consequences of anthropogenic change is imperative for estimating long-term species resilience. While contemporary genomic data can provide us with important insights into recent demographic histories, investigating past change using present genomic data alone has limitations. In comparison, temporal genomics studies, defined herein as those that incorporate time series genomic data, utilize museum collections and repeated field sampling to directly examine evolutionary change. As temporal genomics is applied to more systems, species and questions, best practices can be helpful guides to make the most efficient use of limited resources. Here, we conduct a systematic literature review to synthesize …

Multipatch Stochastic Epidemic Model For The Dynamics Of A Tick-Borne Disease, Milliward Maliyoni, Holly D. Gaff, Keshlan S. Govinder, Faraimunashe Chirove

Biological Sciences Faculty Publications

Spatial heterogeneity and migration of hosts and ticks have an impact on the spread, extinction and persistence of tick-borne diseases. In this paper, we investigate the impact of between-patch migration of white-tailed deer and lone star ticks on the dynamics of a tick-borne disease with regard to disease extinction and persistence using a system of Itô stochastic differential equations model. It is shown that the disease-free equilibrium exists and is unique. The general formula for computing the basic reproduction number for all patches is derived. We show that for patches in isolation, the basic reproduction number is equal to the …

Anti-Tick Vaccine Candidate Subolesin Is Important For Blood Feeding And Innate Immune Gene Expression In Soft Ticks, Krittika Nandy, Comfort Tamakloe, Daniel E. Sonenshine, Hameeda Sultana, Girish Neelakanta

Biological Sciences Faculty Publications

Subolesin is a conserved molecule in both hard and soft ticks and is considered as an effective candidate molecule for the development of anti-tick vaccine. Previous studies have reported the role of subolesin in blood feeding, reproduction, development, and gene expression in hard ticks. However, studies addressing the role of subolesin in soft ticks are limited. In this study, we report that subolesin is not only important in soft tick Ornithodoros turicata americanus blood feeding but also in the regulation of innate immune gene expression in these ticks. We identified and characterized several putative innate immune genes including Toll, Lysozyme …

Strong, Recent Selective Sweeps Reshape Genetic Diversity In Freshwater Bivalve Megalonaias Nervosa, Rebekah L. Rogers, Stephanie L. Grizzard, Jeffrey T. Garner

Biological Sciences Faculty Publications

Freshwater Unionid bivalves have recently faced ecological upheaval through pollution, barriers to dispersal, harvesting, and changes in fish–host prevalence. Currently, over 70% of species in North America are threatened, endangered or extinct. To characterize the genetic response to recent selective pressures, we collected population genetic data for one successful bivalve species, Megalonaias nervosa. We identify megabase-sized regions that are nearly monomorphic across the population, signals of strong, recent selection reshaping diversity across 73 Mb total. These signatures of selection are greater than is commonly seen in population genetic models. We observe 102 duplicate genes with high dN/d …

Floral And Genetic Divergence Across Environmental Gradients Is Moderated By Inter-Population Gene Flow In Platanthera Dilatata (Orchidaceae), Lisa E. Wallace, Marlin L. Bowles

Biological Sciences Faculty Publications

Understanding how natural selection acts on intraspecific variation to bring about phenotypic divergence is critical to understanding processes of evolutionary diversification. The orchid family is well known for pollinator-mediated selection of floral phenotypes operating among species and along environmental or geographic gradients. Its effectiveness at small spatial scales is less understood, making the geographic scale at which intraspecific floral variation is examined important to evaluating causes of phenotypic divergence. In this study, we quantified phenotypic variation in the orchid Platanthera dilatata across 26 populations in coastal Southeast Alaska and compared this to edaphic and genetic variation at microsatellite loci. We …

Territory Inheritance And The Evolution Of Cooperative Breeding In The Acorn Woodpecker, Walter D. Koenig, Joseph Haydock, Hannah L. Dugdale, Eric L. Walters

Biological Sciences Faculty Publications

There are two main hypotheses for why offspring in cooperatively breeding taxa delay dispersal and remain on their natal territory rather than disperse. First, ecological constraints may force offspring to remain on their natal territory until a reproductive opportunity presents itself in an otherwise saturated habitat. Alternatively, delaying dispersal and helping kin may increase an offspring's inclusive fitness. One means by which offspring might enhance their direct fitness by delaying dispersal is by inheriting breeding status on their natal territory. Such territory inheritance regularly occurs in acorn woodpeckers, Melanerpes formicivorus, a species whose social groups consist of a cooperatively …

Co-Occurrence Of Marine And Freshwater Phycotoxins In Oysters, And Analysis Of Possible Predictors For Management, Sarah K. D. Pease, Todd A. Egerton, Kimberly S. Reece, Marta P. Sanderson, Michelle D. Onofrio, Evan Yeargan, Adam Wood, Amanda Roach, I-Shuo Wade Huang, Gail P. Scott, Allen R. Place, Amy M. Hayes, Juliette L. Smith

Biological Sciences Faculty Publications

Oysters (Crassostrea virginica) were screened for 12 phycotoxins over two years in nearshore waters to collect baseline phycotoxin data and to determine prevalence of phycotoxin co-occurrence in the commercially and ecologically-relevant species. Trace to low concentrations of azaspiracid-1 and -2 (AZA1, AZA2), domoic acid (DA), okadaic acid (OA), and dinophysistoxin-1 (DTX1) were detected, orders of magnitude below seafood safety action levels. Microcystins (MCs), MC-RR and MC-YR, were also found in oysters (maximum: 7.12 μg MC-RR/kg shellfish meat wet weight), warranting consideration of developing action levels for freshwater phycotoxins in marine shellfish. Oysters contained phycotoxins that impair shellfish health: karlotoxin1-1 and …

Homogeneity Test On Error Rates From Ordinal Scores And Application To Forensic Science, Ngoc Ty Nguyen

Graduate Thesis and Dissertation 2023-2024

The Receiver Operating Characteristic (ROC) curve is used to measure the classification accuracy of tests that yield ordinal or continuous scores. Ordinal scores are common in medical imaging studies and, more recently, in black-box studies on forensic identification accuracy (Phillips et al., 2018). To assess the accuracy of radiologists in medical imaging studies or the accuracy of forensic examiners in biometric studies, one needs to estimate the ROC curves from the ordinal scores and account for the covariates related to the radiologists or forensic examiners. In this thesis, we propose a homogeneity test to compare the performance of raters. We …

A Comprehensive Review Of The Influence Of Heat Exchange Tubes On Hydrodynamic, Heat, And Mass Transfer In Bubble And Slurry Bubble Columns, Dalia S. Makki, Hasan Sh Majdi, Amer A. Abdulrahman, Abbas J. Sultan, Zahraa W. Hasan, Laith S. Sabri, Bashar J. Kadhim, Muthanna H. Al-Dahhan

Chemical and Biochemical Engineering Faculty Research & Creative Works

Bubble and slurry bubble column reactors (BCRs/SBCRs) are used for various chemical, biochemical, and petrochemical applications. They have several operational and maintenance advantages, including excellent heat and mass transfer rates, simplicity, and low operating and maintenance cost. Typically, a catalyst is present in addition to biochemical processes where microorganisms are used to produce industrially valuable bio-products. Since most applications involve complicated gas-liquid, gas-liquid-solid, and exothermic processes, the BCR/SBCR must be equipped with heat-exchanging tubes to dissipate heat and control the reactor's overall performance. In this review, past and very recent experimental and numerical investigations on such systems are critically discussed. …

“Should I Sacrifice To Live Half-American?”: An Examination Of The Double V Campaign, Zoё Scott-Goss

CGU Theses & Dissertations

This thesis examines the Double V Campaign and focuses on the movement as an expression of African American aspirations for the recognition of their full American citizenship rights. The Double V Campaign helped many black Americans reconcile the paradoxes of being asked to fight for a country that denied African Americans their full citizenship rights. Despite no political or social changes occurring as a direct result of the campaign, the movement taught African Americans to avoid mistakes of the past and provide a roadmap for alternative and potentially successful ways to mobilize; lessons that proved essential in the successes of …

A Digital Transformation Framework For Biopharma Manufacturing, Frederick K. Johnson

CGU Theses & Dissertations

In the current climate of economic uncertainty and social unrest, biopharmaceutical (biopharma) companies face the challenges of changes in consumer behavior, cyber threats, and technological advancement. At the same time, their top priorities are global market growth, strengthening R&D, and undergoing digital transformation (Dx). Given these developments, biopharma organizations must choose a Dx framework as they engage in the digital transformation of their businesses in this high-stakes environment. However, there are significant problems with existing Dx frameworks. Most models are generalized frameworks designed to sell consulting services. Some focus on the enterprise or the manufacturing operations, but not both, and …

Public Health And The Politics Of Haussmannization In Nineteenth-Century Paris, 1830-1870, Mikaela Malsy

CGU Theses & Dissertations

Throughout the Second Empire, Napoléon III and his Prefect of the Seine, Georges Haussmann, engaged in a series of urban reform projects that transformed Paris. These projects, often collectively referred to as Haussmannization, entailed the construction of boulevards, expansion of the sewer system, and clearance of what the state considered insalubrious housing. This term was largely prescribed to worker-class housing and used as a medical justification to target and destroy working-class communities. However, as this paper discusses, the understanding of insalubrity was shaped by hygienists' pathologization of poverty, crime, and working-class militancy in response to the arrival of cholera and …

Pict-Dpa: A Quality-Compliance Data Processing Architecture To Improve The Performance Of Integrated Emergency Care Clinical Decision Support System, Ruizhi Yu

CGU Theses & Dissertations

Emergency Care System (ECS) is a critical component of health care systems by providing acute resuscitation and life-saving care. As a time-sensitive care operation system, any delay and mistake in the decision-making of these EC functions can create additional risks of adverse events and clinical incidents. The Emergency Care Clinical Decision Support System (EC-CDSS) has proven to improve the quality of the aforementioned EC functions. However, the literature is scarce on how to implement and evaluate the EC-CDSS with regard to the improvement of PHOs, which is the ultimate goal of ECS. The reasons are twofold: 1) lack of clear …

A Jotería Identity And Belonging: Pláticas Of Co-Creation With Queer And Trans Latinx Graduate Students In Higher Education, Sergio A. Gonzalez

CGU Theses & Dissertations

Homophobia, patriarchy, and white supremacy are deeply embedded in academia and our communities; consequently, there is a lack of empirical research that speaks to the collective experiences connected to Jotería, queer people of color, and Latinx graduate students (Tijerina Revilla & Santillana, 2014). Additionally, research has found that too often, queer and trans (QT) Latinx and other queer communities of color are pushed aside to the margins of academia and society (Tijerina Revilla & Santillana, 2014). Furthermore, silenced, queer and trans, Latinx student experiences, both inside of the classroom, and within the larger college community, lead to a lack of …

A Forward-Looking Conceptualization Of Information Privacy, David Kallemeyn

CGU Theses & Dissertations

Privacy is a fluid and ever-evolving concept, studied across multiple fields and with numerous definitions. Privacy research in information systems (IS) is extensive yet has not traveled far beyond the IS realm and fully engaged in the broader conversations being had with regards to privacy. This research seeks to define a larger sense of privacy that integrates the many working definitions across fields, along with related concepts, and to develop an alternative framework that can account for the constant technological and socio-technical changes through which to engage in privacy research. One such framework is developed and tested, grounded in the …

An Analysis Of Water Quality At Orange County, California Beaches, Naomi Meurice

Pomona Senior Theses

Beaches in Southern California are highly recreated by residents and visitors, making beaches socially and economically important. Public health departments in coastal communities are in charge of measuring water quality and ensuring it is safe for users. Research in the past has indicated that beach water quality gets worse after storms, with bacteria levels jumping on the day of a storm and staying high for up to five days. Studies have shown these spikes in bacteria to be associated with storm runoff, with beaches closer to runoff discharge locations experiencing more impact. However, prior research has not considered the period …

Warehouses In The Inland Empire: Displacing Land And Life, Katherine Gelsey

Pomona Senior Theses

The Inland Empire in Southern California embodies unique spatial and social configurations as a consequence of how settler colonialism has manifested locally in the region since the Spanish Mission Period. This work uses GIS software to estimate patterns of land conversion for residential, agricultural, and warehouse land from 2012 to 2022. Preliminary analysis suggests that thousands of people have been displaced by warehouse expansion over the ten-year period. In the twenty-first century, the Southern California logistics industry continues processes of land dispossession and racialized labor exploitation through displacing agricultural and residential land, exposing disproportionately low-income Black and Latine communities living …