Digital Commons Network^™

Current Oral Hygiene And Recreational Behavioral Trends In Hiv Disease, Donald E. Mercante, Emily Guarisco, Elizabeth A. Lilly, Arni Rao, Kelly Treas, Clifford J. Beall, Zach Thompson, Ann L. Griffen, Eugene J. Leys, Jose A. Vazquez, Michael E. Hagensee, Paul L. Fidel

School of Dentistry Faculty Publications

Objective: HIV disease is evolving with more HIV+ persons experiencing a high quality of life with well-controlled viremia. We recently enrolled a large cohort of HIV+ and clinically relevant HIV− persons for oral microbiome analyses that included a questionnaire related to oral hygiene and recreational behaviors. Here, the questionnaire responses were analyzed for behavioral trends within the cohort, together with trends over time by comparison to a previous geographically centered HIV+ cohort. Methods: Data were collected by questionnaire at baseline visits as cross-sectional assessments. Multivariable analyses were conducted for associations of HIV status as well as age, race, and sex, …

Exploring The Determinants Of Organic Matter Bioavailability Through Substrate-Explicit Thermodynamic Modeling, Firnaaz Ahamed, Yaqi You, Amy Burgin, James C. Stegen, Timothy D. Scheibe, Hyun-Seob Song

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Microbial decomposition of organic matter (OM) in river corridors is a major driver of nutrient and energy cycles in natural ecosystems. Recent advances in omics technologies enabled high-throughput generation of molecular data that could be used to inform biogeochemical models. With ultrahigh-resolution OM data becoming more readily available, in particular, the substrate-explicit thermodynamic modeling (SXTM) has emerged as a promising approach due to its ability to predict OM degradation and respiration rates from chemical formulae of compounds. This model implicitly assumes that all detected organic compounds are bioavailable, and that aerobic respiration is driven solely by thermodynamics. Despite promising demonstrations …

Oxytocin Attenuates Yohimbine-Induced Reinstatement Of Alcohol-Seeking In Female Rats Via The Central Amygdala, Samantha M. Wilfur, Elizabeth C. Mcneely, Aliya A. Lackan, Cassie P. Bowers, Kah-Chung Leong

Psychology Faculty Research

Alcohol use disorder is a significant public health concern, further exacerbated by an increased risk of relapse due to stress. In addition, factors such as biological sex may contribute to the progression of addiction, as females are especially susceptible to stress-induced relapse. While there have been many studies surrounding potential pharmacological interventions for male stress-induced ethanol reinstatement, research regarding females is scarce. Recently, the neuropeptide oxytocin has gained interest as a possible pharmacological intervention for relapse. The present study examines how oxytocin affects yohimbine-induced reinstatement of ethanol-seeking in female rats using a self-administration paradigm. Adult female rats were trained to …

A Bayesian Network Approach To Social And Nonsocial Cognition In Schizophrenia: Are Some Domains More Fundamental Than Others?, Samuel J Abplanalp, Junghee Lee, William P Horan, Robert S Kern, David L Penn, Michael F Green

Faculty, Staff and Student Publications

OBJECTIVES: Social and nonsocial cognition are defined as distinct yet related constructs. However, the relative independence of individual variables-and whether specific tasks directly depend on performance in other tasks-is still unclear. The current study aimed to answer this question by using a Bayesian network approach to explore directional dependencies among social and nonsocial cognitive domains.

STUDY DESIGN: The study sample comprised 173 participants with schizophrenia (71.7% male; 28.3% female). Participants completed 5 social cognitive tasks and the MATRICS Consensus Cognitive Battery. We estimated Bayesian networks using directed acyclic graph structures to examine directional dependencies among the variables.

STUDY RESULTS: After …

Caudal Dmn Neurons Innervate The Spleen And Release Cart Peptide To Regulate Neuroimmune Function, Nobuhide Kobori, Anthony N Moore, John B Redell, Pramod K Dash

Faculty, Staff and Student Publications

BACKGROUND: Inflammation is a fundamental biological response to injury and infection, which if unregulated can contribute to the pathophysiology of many diseases. The vagus nerve, which primarily originates from the dorsal motor nucleus (DMN), plays an important role in rapidly dampening inflammation by regulating splenic function. However, direct vagal innervation of the spleen, which houses the majority of immune and inflammatory cells, has not been established. As an alternative to direct innervation, an anti-inflammatory reflex pathway has been proposed which involves the vagus nerve, the sympathetic celiac ganglion, and the neurotransmitter norepinephrine. Although sympathetic regulation of inflammation has been shown, …

Examining Adolescent Peer Victimization, Emotion Regulation, And Mental Health Using Path Analysis, Kelsey Ann Walker

Electronic Theses and Dissertations Archive

The adverse effects of peer victimization in adolescent development have been consistently shown, including but not limited to internalizing problems, externalizing problems, and reduced life satisfaction. Emotion regulation, a critical individual level factor to the stress-coping process, potentially affects mental health in the context of peer victimization through different mechanisms. Based on theories and relevant empirical research, in the current study, the first mechanism was examined through mediation models, in which emotion regulation strategies (i.e., cognitive reappraisal and expressive suppression) were mediators in the relations between peer victimization and mental health. The second mechanism was tested via moderation models to …

Kangaroo Care Impact On Maternal Health: An Integrative Review, Alexis Ann Lawson

Doctoral Dissertations and Projects

Health care should progress and change as the needs of the population change. As light is shed on the mothers’ experiences during the postpartum period, there is an increasing need to find and implement evidence-based interventions to promote their health and wellness. As a vulnerable population, postpartum women require appropriate treatments and interventions to avoid postpartum complications. Three key themes of postpartum health and well-being that directly and significantly impact mothers are postpartum depression, maternal and infant attachment, and exclusive breastfeeding. This integrative review addressed the correlation between each of these themes and how kangaroo care, upright skin-to-skin contact, impacts …

Naturally Occurring Highly Pathogenic Avian Influenza Virus H5n1 Clade 2.3.4.4b Infection In Three Domestic Cats In North America During 2023, Sarah J. Sillman, Mary Drozd, Duan S. Loy, Seth P. Harris

School of Veterinary and Biomedical Sciences: Faculty Publications

The Eurasian strain of highly pathogenic avian influenza (HPAI) H5N1 is a devastating pathogen for birds that also has the capacity to infect mammals. This report describes the presentation, clinical case findings (including haemogram and serum biochemistry), gross and microscopic lesions and virus detection in three HPAI H5N1-infected domestic cats from the USA in 2023. All three cats presented with neurological abnormalities and were euthanized due to a poor prognosis within 2 days (two cats) or 10 days (one cat) of known clinical disease onset. Necropsy consistently revealed pulmonary congestion and oedema, and cerebrocortical malacia with haemorrhage was also seen …

A Theistic Critique Of Secular Moral Nonnaturalism, Dale Eugene Kratt

Doctoral Dissertations and Projects

This dissertation is an exercise in Theistic moral apologetics. It will be developing both a critique of secular nonnaturalist moral theory (moral Platonism) at the level of metaethics, as well as a positive form of the moral argument for the existence of God that follows from this critique. The critique will focus on the work of five prominent metaethical theorists of secular moral non-naturalism: David Enoch, Eric Wielenberg, Russ Shafer-Landau, Michael Huemer, and Christopher Kulp. Each of these thinkers will be critically examined. Following this critique, the positive moral argument for the existence of God will be developed, combining a …

Context Dependence, Cheating, And Long-Term Conflict In Social Interactions, Trey Scott

Arts & Sciences Graduate Student Theses and Dissertations

Social interactions are widespread in nature and can have important ecological and evolutionary consequences. Interactions are often categorized by who is benefited or harmed by the symbiosis. For example, if both sides benefit, the interaction is cooperative. If one side benefits at the expense of the other, it is an antagonism. The kind of interaction can have important evolutionary implications, but interactions rarely fit neatly into these interaction categories. Instead, interactions often involve elements of cooperation and conflict. My dissertation explores the consequences of interactions and how they can involve both cooperation and conflict using a range of experimental, genomic, …

Human Gut Bacteria Tailor Extracellular Vesicle Cargo For The Breakdown Of Diet- And Host-Derived Glycans, Mariana G Sartorio, Evan J Pardue, Nichollas E Scott, Mario F Feldman

2020-Current year OA Pubs

Extracellular vesicles are produced in all three domains of life, and their biogenesis has common ancient origins in eukaryotes and archaea. Although bacterial vesicles were discovered several decades ago and multiple roles have been attributed to them, no mechanism has been established for vesicles biogenesis in bacteria. For this reason, there is a significant level of skepticism about the biological relevance of bacterial vesicles.

Aerobic Exercise Reverses Aging-Induced Depth-Dependent Decline In Cerebral Microcirculation, Paul Shin, Ikbal Şencan-Eğilmez, Et Al.

2020-Current year OA Pubs

Aging is a major risk factor for cognitive impairment. Aerobic exercise benefits brain function and may promote cognitive health in older adults. However, underlying biological mechanisms across cerebral gray and white matter are poorly understood. Selective vulnerability of the white matter to small vessel disease and a link between white matter health and cognitive function suggests a potential role for responses in deep cerebral microcirculation. Here, we tested whether aerobic exercise modulates cerebral microcirculatory changes induced by aging. To this end, we carried out a comprehensive quantitative examination of changes in cerebral microvascular physiology in cortical gray and subcortical white …

Metabolic Signatures Of Cardiac Dysfunction, Multimorbidity, And Post-Transcatheter Aortic Valve Implantation Death, Andrew S Perry, Nishath Quader, Alan Zajarias, Et Al.

2020-Current year OA Pubs

Background Studies in mice and small patient subsets implicate metabolic dysfunction in cardiac remodeling in aortic stenosis, but no large comprehensive studies of human metabolism in aortic stenosis with long-term follow-up and characterization currently exist. Methods and Results Within a multicenter prospective cohort study, we used principal components analysis to summarize 12 echocardiographic measures of left ventricular structure and function pre-transcatheter aortic valve implantation in 519 subjects (derivation). We used least absolute shrinkage and selection operator regression across 221 metabolites to define metabolic signatures for each structural pattern and measured their relation to death and multimorbidity in the original cohort …

A Novel Enu-Induced, Timothy J Hines, Janice Bailey, Hedi Liu, Anyonya R Guntur, Kevin L. Seburn, Samia L Pratt, Jonathan R Funke, Lisa M Tarantino, Robert W. Burgess

Faculty Research 2023

The fission and fusion of mitochondria are important processes for maintaining mitochondrial health. One of the proteins responsible for mediating mitochondrial fusion, mitofusin 2 (MFN2), has over 100 known mutations that cause Charcot–Marie–Tooth disease type 2A (CMT2A). This disease causes the nerves that control your muscles to degenerate, leading to muscle atrophy and weakness, problems walking, and other related symptoms. In this paper, we describe a mouse line with a recessive mutation in the Mfn2 gene (Leu643Pro) that causes a similar set of symptoms, including abnormal gait, weight loss, and decreased muscular endurance. However, further analysis of these mice revealed …

Effects Of Sex And Estrous Cycle On Intravenous Oxycodone Self-Administration And The Reinstatement Of Oxycodone-Seeking Behavior In Rats, Nicole M. Hinds, Ireneusz D. Wojtas, Corinne A. Gallagher, Claire M. Corbett, Daniel F. Manvich

Rowan-Virtua School of Osteopathic Medicine Departmental Research

The increasing misuse of both prescription and illicit opioids has culminated in a national healthcare crisis in the United States. Oxycodone is among the most widely prescribed and misused opioid pain relievers and has been associated with a high risk for transition to compulsive opioid use. Here, we sought to examine potential sex differences and estrous cycle-dependent effects on the reinforcing efficacy of oxycodone, as well as on stress-induced or cue-induced oxycodone-seeking behavior, using intravenous (IV) oxycodone self-administration and reinstatement procedures. In experiment 1, adult male and female Long-Evans rats were trained to self-administer 0.03 mg/kg/inf oxycodone according to a …

Simulated Mechanical Control Of Nitellopsis Obtusa Under Mesocosm Conditions, Alyssa M. Haram, Ryan M. Wersal

Biological Sciences Department Publications

Management efforts to control starry stonewort [Nitellopsis obtusa (Desvaux in Loiseleur) J. Groves] have been limited to stressing the thalli and have not been able to directly target the reproductive bulbils. Smaller-scale efforts such as the use of hand pulling can be employed, but hand pulling is not realistic for larger infestations. This research was conducted to test the effects of clipping stress on N. obtusa to provide a baseline for the effect of stress on the production of bulbils and the regrowth of thalli. Mesocosms were set up under greenhouse conditions to test the effects on N. obtusa of …

Budding Uninhibited By Benzimidazoles-1 (Bub1) Regulates Egfr Signaling By Reducing Egfr Internalization, Shyam Nyati, Grant Young, Corey Speers, Mukesh K. Nyati, Alnawaz Rehemtulla

Radiation Oncology Articles

EGFR signaling initiates upon ligand binding which leads to activation and internalization of the receptor-ligand complex. Here, we evaluated if BUB1 impacted EGFR signaling by regulating EGFR receptor internalization and activation. BUB1 was ablated genomically (siRNA) or biochemically (2OH-BNPP1) in cells. EGF ligand was used to initiate EGFR signaling while disuccinimidyl suberate (DSS) was used for cross linking cellular proteins. EGFR signaling was measured by western immunoblotting and receptor internalization was evaluated by fluorescent microscopy (pEGFR (pY1068) colocalization with early endosome marker EEA1). siRNA mediated BUB1 depletion led to an overall increase in total EGFR levels and more phospho-EGFR (Y845, …

Association Between Historical Neighborhood Redlining And Cardiovascular Outcomes Among Us Veterans With Atherosclerotic Cardiovascular Diseases, Salil V. Deo, Issam Motairek, Khurram Nasir, Amgad Mentias, Yakov Elgudin, Salim S. Virani, Sanjay Rajagopalan, Sadeer Al-Kindi

Office of the Provost

Importance: In the 1930s, the government-sponsored Home Owners' Loan Corporation (HOLC) established maps of US neighborhoods that identified mortgage risk (grade A [green] characterizing lowest-risk neighborhoods in the US through mechanisms that transcend traditional risk factors to grade D [red] characterizing highest risk). This practice led to disinvestments and segregation in neighborhoods considered redlined. Very few studies have targeted whether there is an association between redlining and cardiovascular disease.
Objective: To evaluate whether redlining is associated with adverse cardiovascular outcomes in US veterans.
Design, setting, and participants: In this longitudinal cohort study, US veterans were followed up (January 1, 2016, …

Endemic Galapagos Tree Daisy Scalesia Pedunculata Threatened By Competition With Nonnative Blackberry Rubus Niveus, Heinke Jäger, Christian Sevilla, Bernhard Riegl

Marine & Environmental Sciences Faculty Articles

There is a debate whether invasive plants can induce extinction debt in native flora that is not immediately obvious. Competitive effects of invasions and how competition causes native biodiversity loss are complicated to evaluate. Experi-mental removal or introduction bears the most promise of demonstrating native species displacement mechanics. Over an eight- year period, we followed plots in the only remaining Scalesia pedunculata forest on Santa Cruz Island, Galapagos, where invading Rubus niveus was either removed or retained. Demographic param-eters and total recruitment failure in the presence of R. niveus suggest that S. pedun-culata may face local extinction in two decades …

Giant Worm-Shaped Escrt Scaffolds Surround Actin-Independent Integrin Clusters, Femmy C. Stempels, Muwei Jiang, Harry M. Warner, Magda Lena Moser, Maaike H. Janssens, Sjors Maassen, Iris H. Nelen, Boer R De, William F. Jiemy, David Knight, Julian Selley, Ronan O’Cualain, Maksim V. Baranov, Thomas C.Q. Burgers, Roberto Sansevrino, Dragomir Milovanovic, Peter Heeringa, Matthew C. Jones, Rifka Vlijm, Beest M Ter, Den Bogaart G Van

Peninsula Medical School

Endosomal Sorting Complex Required for Transport (ESCRT) proteins can be transiently recruited to the plasma membrane for membrane repair and formation of extracellular vesicles. Here, we discovered micrometer-sized worm-shaped ESCRT structures that stably persist for multiple hours at the plasma membrane of macrophages, dendritic cells, and fibroblasts. These structures surround clusters of integrins and known cargoes of extracellular vesicles. The ESCRT structures are tightly connected to the cellular support and are left behind by the cells together with surrounding patches of membrane. The phospholipid composition is altered at the position of the ESCRT structures, and the actin cytoskeleton is locally …

A Metabologenomics Approach To Unlock The Metabolome Of The Novel Antarctic Deep-Sea Isolate Lacinutrix Shetlandiensis Sp. Nov. Wur7, Giovanni A. Vitale, Grant G. January, Ernest Oppong-Danquah, Sala G Della, Esposito F Palma, Deniz Tasdemir, Pascale D De

School of Biomedical Sciences

Abstract The South Shetland Trough, Antarctica, is an underexplored region for microbiological and biotechnological exploitation. Herein, we describe the isolation and characterization of the novel bacterium Lacinutrix shetlandiensis sp. nov. WUR7 from a deep-sea environment. We explored its chemical diversity via a metabologenomics approach, wherein the OSMAC strategy was strategically employed to upregulate cryptic genes for secondary metabolite production. Based on hybrid de novo whole genome sequencing and digital DNA–DNA hybridization, isolate WUR7 was identified as a novel species from the Gram-negative genus Lacinutrix. Its genome was mined for the presence of biosynthetic gene clusters with limited results. However, extensive …

Age-Related Alterations In Meningeal Immunity Drive Impaired Cns Lymphatic Drainage, Justin Rustenhoven, Georgios Pavlou, Steffen E Storck, Taitea Dykstra, Siling Du, Zhengpeng Wan, Daniel Quintero, Joshua P Scallan, Igor Smirnov, Roger D Kamm, Jonathan Kipnis

2020-Current year OA Pubs

The meningeal lymphatic network enables the drainage of cerebrospinal fluid (CSF) and facilitates the removal of central nervous system (CNS) waste. During aging and in Alzheimer's disease, impaired meningeal lymphatic drainage promotes the buildup of toxic misfolded proteins in the CNS. Reversing this age-related dysfunction represents a promising strategy to augment CNS waste clearance; however, the mechanisms underlying this decline remain elusive. Here, we demonstrate that age-related alterations in meningeal immunity underlie this lymphatic impairment. Single-cell RNA sequencing of meningeal lymphatic endothelial cells from aged mice revealed their response to IFNγ, which was increased in the aged meninges due to …

A Rapid Cell-Free Expression And Screening Platform For Antibody Discovery, Andrew C Hunt, Bastian Vögeli, Ahmed O Hassan, Laura Guerrero, Weston Kightlinger, Danielle J Yoesep, Antje Krüger, Madison Dewinter, Michael S Diamond, Ashty S Karim, Michael C Jewett

2020-Current year OA Pubs

Antibody discovery is bottlenecked by the individual expression and evaluation of antigen-specific hits. Here, we address this bottleneck by developing a workflow combining cell-free DNA template generation, cell-free protein synthesis, and binding measurements of antibody fragments in a process that takes hours rather than weeks. We apply this workflow to evaluate 135 previously published antibodies targeting the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), including all 8 antibodies previously granted emergency use authorization for coronavirus disease 2019 (COVID-19), and demonstrate identification of the most potent antibodies. We also evaluate 119 anti-SARS-CoV-2 antibodies from a mouse immunized with the SARS-CoV-2 spike …

Response To "Department Of Commerce, National Institute Of Standards And Technology, Agency Information Collection Activities", Fred D. Ledley

CISI Publication

This response supports the recommendations of the interagency working group for Bayh-Dole that the dataset collected and archived in iEdison “…be amended and expanded so that the agencies could get a clear picture of the commercialization plans for subject inventions, what the licensing landscape looked like, (and) what products were resulting, …”

Our comments are informed by several recent studies describing the effectiveness and reach of the Bayh-Dole Act in promoting and protecting the public interest in practical applications of government-funded biomedical research to pharmaceutical innovations.

Intouch Week Of July 3, 2023, New York Medical College

InTouch

• The 2023 Issue of Chironian is Available
• Golf Outing Supports Student Scholarships
• Sambit Mohapatra, Ph.D., M.S., PT, is Named Chair of the Department of Rehabilitation Sciences
  
• Drs. Abraham and Moscatello Return to Ukraine to Train Reconstructive Plastic Surgeons
• CDM Receives Commission on Accreditation of Pre-Hospital Continuing Education Accreditation
• Chancellor Halperin Hosts Town Hall Meeting
• NYMC and TU Hosts Webinar Series: “Ninety Minutes: The Medical Magazine of the Web”
• NYMC Presents, "Breaking the Color Code in the Health Care System"
• Paving Improves Sunshine Cottage Parking Lots

Isolation Of Genomic Dna From Mammalian Cells And Fixed Tissue, Kristy L.S. Miskimen, Penelope L. Miron

Faculty Scholarship

Examination of DNA variation is central to understanding the function of mammalian cells, tissues, and whole bodies. Extraction of high‐quality DNA from cells and tissues is necessary for innumerable different experiments. We present protocols for the extraction of DNA from both fresh samples and formalin‐fixed tissue. Methods for extracting DNA have been standardized and streamlined over the past couple of decades and many extraction kits are available for a reasonable cost. In addition, many of the extraction procedures can also be automated for even higher throughput sample preparation.

Spatiotemporal Walking Gait Kinematics Of Semi-Arboreal Red Pandas (Ailurus Fulgens), Maura R. Plocek, Noah T. Dunham

Student Scholarship

Semi-arboreal mammals must routinely cope with the differing biomechanical challenges of terrestrial versus arboreal locomotion; however, it is not clear to what extent semi-arboreal mammals adjust footfall patterns when moving on different substrates. We opportunistically filmed quadrupedal locomotion (n = 132 walking strides) of semi-arboreal red pandas (Ailurus fulgens; n = 3) housed at Cleveland Metroparks Zoo and examined the effects of substrate type on spatiotemporal gait kinematic variables using linear mixed models. We further investigated the effects of substrate diameter and orientation on arboreal gait kinematics. Red pandas exclusively used lateral sequence (LS) gaits and most frequently utilized LS …

Enough Is Enough: Salvage Procedures In Severe Periprosthetic Joint Infection, Yves Gramlich, Javad Parvizi

Rothman Institute Papers

Background

In severe cases of periprosthetic joint infection involving negative host-dependent factors, individual-based decisions between a curative therapy vs. salvage procedure are necessary. We aimed to review salvage procedures in severe periprosthetic joint infection cases, where a gold standard of a curative two-stage exchange can no longer be achieved. The options of knee arthrodesis, amputation, persistent fistula (stable drainage), or a debridement, antibiotics, and implant retention procedure in late-onset cases are discussed, including lifelong antibiotic suppression alone.

Methods

We focused on known salvage procedures for severe periprosthetic joint infection of the hip and knee, such as amputation, arthrodesis, antibiotic …

Dialectical Behavior Therapy Application Efficacy In The World Of An Athlete: Addressing Special Considerations, John P. Ferraro

Psychology Doctoral Specialization Projects

The current project aimed to analyze the potential that Dialectical Behavior Therapy Skills Training (DBT-ST) could have on the student-athlete population. The project necessitated a research exploration of both DBT and sports psychology treatment. This was accomplished by searching Eastern Kentucky University (EKU) Library’s extensive databases, such as Academic Search Complete, PsycINFO, SportDISCUS, and Psycharticles. Considerations are discussed on athlete-specific concerns, such as stigma, athlete cultural views on mental health, eating disorders, coping through injury, and performance anxiety. Current sport psychology interventions are reviewed, and they are compared with the efficacy of DBT treatment literature. Similarities in sport psychology interventions …

When Those With Privacy Concerns Show Stronger In-Group Favoritism: Using Personal Information From In-Group And Out-Group Members To Identify Terrorist Threats, Torsten Reimer, Nathanael Johnson

Purdue University Libraries Open Access Publishing Fund

Terrorist threats and attacks provide major risks and sources of public crises in the 21st century. New probabilistic computing technologies possess the capability of increasing the success of identifying terrorist threats and solving cybersecurity and encryption problems more efficiently. However, to identify terrorist threats, these technologies would require the use of a large amount of personal data, which cause potential concerns for privacy. We offer a social-identity explanation of public support for the detection of terrorist threats through the use of online personal data. A survey study (N = 1,204) revealed strong support for the provided social-identity explanation of …