Digital Commons Network^™

A Suggested Data Structure For Transparent And Repeatable Reporting Of Bibliographic Searching, Neal R. Haddaway, Melissa L. Rethlefsen, Melinda Davies, Julie Glanville, Bethany Mcgowan, Kate Nyhan, Sarah Young

Publications

Academic searching is integral to research activities: (1) searching to retrieve specific information, (2) to expand our knowledge iteratively, (3) and to collate a representative and unbiased selection of the literature. Rigorous searching methods are vital for reliable, repeatable and unbiased searches needed for these second and third forms of searches (exploratory and systematic searching, respectively) that form a core part of evidence syntheses. Despite the broad awareness of the importance of transparency in reporting search activities in evidence syntheses, the importance of searching has been highlighted only recently and has been the explicit focus of reporting guidance (PRISMA-S). Ensuring …

Food Security & Urban Agriculture - Considerations For Soil Improvements And Crop Planning, Aaron Sedivy

Doctor of Plant Health Program: Dissertations and Student Research

Urban agriculture provides many benefits, such as energy conservation, rainwater remediation, increased aesthetic and property value, and therapeutic use for physical, cognitive, and emotional wellbeing. Urban agriculture can also provide critical integrity to each pillar of food security: availability, access, utilization, and stability. As urban agricultural activities increase, social interactions will follow in concert. This will provide opportunities for building trust through the two-way communication of contrasting perspectives, cultures, and beliefs using impartial narratives. Growers can use knowledge and understanding gained from these positive social interactions to formulate their personal paradigms for practice and better meet the needs of each …

Evaluating The Efficacy Of Germination And Fermentation In Producing Biologically Active Peptides From Pulses, Ashley Newton

Department of Food Science and Technology: Dissertations, Theses, and Student Research

Recently, there has been a profound increase in demand of plant-based proteins, especially pulse proteins. However, pulses contain high concentrations of antinutritional factors that hinder the digestibility of proteins. Processing techniques such as enzymatic hydrolysis, microbial fermentation, and physical processing modulate nutritional quality and functionality of pulses. Processing also releases peptides from parent proteins that exhibit health-beneficial bioactivity against various disease risk factors. In this study, germination, gastrointestinal digestion, and microbial fermentation were evaluated to determine the nutritional quality and release of bioactive peptides during and after processing.

Germination of chickpeas (Cicer arietinum L.) modulated the protein profile, and …

The North Platte River Valley: The Intersectionality Between Water Quality And People, Anni Poetzl

School of Natural Resources: Dissertations, Theses, and Student Research

The North Platte River (NPR) Valley of western Nebraska is a semi-arid watershed with row crop production, livestock production, and urban land use activity and has a population of diverse stakeholders. These land use activities contribute to the enrichment of surface waters, such as streams, which can affect human and ecosystem health, as well as economic development and recreational activities. The project objectives are to: (1) quantify the movement of dissolved inorganic nutrients from the land within the NPR Valley to the NPR via tributaries and canals, (2) identify spatiotemporal variability of nutrient limitation of periphyton growth within the NPR, …

Nature Tech: A Nascent Ecosystem, Simon J.D. Schillebeeckx

Research Collection Lee Kong Chian School Of Business

When people talk about climate tech, they tend to mean carbon tech. It’s all carbon tunnel vision: Carbon footprint, carbon equivalent, carbon credit, carbon compensation, carbon emission reductions, carbon offsets, decarbonization and so on. By extension, the entire debate about energy transition, energy transformation, clean power and green energy is similarly a debate that is largely held within the carbon tunnel. Make no mistake about it. These are important topics to address. The energy transition will not only prevent catastrophic climate change but have massive benefits for human health by tackling fossil-fuel induced air pollution at the source.As the above …

A Substring Replacement Approach For Identifying Missing Is-A Relations In Snomed Ct, Xubing Hao, Rashmie Abeysinghe, Jay Shi, Licong Cui

Faculty, Staff and Student Publications

Biomedical ontologies provide formalized information and knowledge in the biomedical domain. Over the years, biomedical ontologies have played an important role in facilitating biomedical research and applications. Common quality issues of biomedical ontologies include inconsistent naming of concepts, redundant concepts, redundant relations, incomplete/incorrect concept definitions, and incomplete/incorrect class hierarchies. In this work, we focus on addressing the incompleteness of the class hierarchy in SNOMED CT. We develop a substring replacement approach, leveraging concepts’ lexical features and existing IS-A relations to identify potential missing IS-A relations in SNOMED CT. To evaluate the effectiveness of our approach, we performed both automated and …

(R1976) A Novel Approach To Solve Fuzzy Rough Matrix Game With Two Players, Vinod Jangid, Ganesh Kumar, Gaurav Sharama, Vishnu Narayan Mishra

Applications and Applied Mathematics: An International Journal (AAM)

This paper proposes a new method for solving a two-person zero-sum fuzzy matrix game with goals, payoffs, and decision variables represented as triangular fuzzy rough numbers. We created a pair of fully fuzzy rough linear programming problems for players. Triangular fuzzy rough numbers can be used to formulate two fuzzy linear programming problems for the first player in the form of upper approximation intervals and lower approximation intervals. Two problems for the second player can be created in the same way. These problems have been split into five sub-crisp problems for the player first and five sub-crisp problems for the …

Transgender Youth Athletes: Does California Actually Protect Them From Discrimination?, Allison Dotta

University of the Pacific Law Review

No abstract provided.

The Way Of The Dodo: On The Origin Of Specious Anti-Critical Race Theory Laws, Matt Urban

University of the Pacific Law Review

No abstract provided.

Investigating Quality Attributes And Wine Production Methods Of Arkansas-Grown Grapes, Amanda Fleming

Graduate Theses and Dissertations

Grapevines (Vitis species) are grown worldwide to produce table grapes, juice grapes, dried grapes, and wine with the United States as one of the world’s largest wine and grape producers. Though not a large contributor to the U.S. grape and wine industry, Arkansas’ industry plays an important role in the state’s agritourism and economy. Most grapes grown in Arkansas’ warm climate include native species, such as muscadines (V. rotundifolia) and hybrids (crosses of Vitis species). Two important hybrid red wine grapes grown in Arkansas are Chambourcin, grown commercially for its positive viticulture and enological quality, and Enchantment, a newer cultivar …

Importance Of Light Activation For Plant Cryptochrome And Antibacterial Drug Delivery Strategies, Merfat Ahmed Hammad

Theses and Dissertations

The goal of this project is to investigate the benefits of applying light in different systems. In the first part, the magnetoreception process that occurs in the light activated cryptochrome of Arabidopsis Thaliana was investigated. In the second part, photo-carbon monoxide releasing molecules (photo-CORMs) were investigated for their antibacterial effect to develop biomedical strategies. Overall, this has been achieved in three different studies. The first study investigated if the forward lightdriven reaction is involved in the magnetoreception process or not in cryptochrome (CRY). To accomplish this, the plant seedlings were tested for 90 minutes as follows: 5 minutes in the …

Inhibiting C-C Chemokine Receptor 7 Activation Of T-Cell Acute Lymphoblastic Leukemia By A Ccl19/Macrophage Inflammatory Protein-3Β Antagonist, Angel Torres

Open Access Theses & Dissertations

The binding of C-C Chemokine Ligand 19 (CCL19) to C-C chemokine receptor 7 (CCR7) receptor has been linked to T-cell activation, tolerance, and inflammation. CCR7 is a member of the chemotactic cytokine family, essential in the development of T cells and regulatory processes such as immune-cell trafficking. This is accompanied by chemokine ligand concentration and time-dependent internalization, which is efficiently promoted by CCL19. A novel N-terminal truncation of CCL19 has been previously developed as an antagonist observed to impede induced chemotaxis and calcium mobilization in mouse primary immune cells. The current antagonist has suggested a key role of CCL198-83 in …

Compact Electrospray Propulsion Systems For Small Form-Factor Satellites: An Orbital Performance Survey & Platform Design, Alberto Meza

Open Access Theses & Dissertations

Over the past decades, small form-factor satellites such as CubeSats have remained as one of the most accessible platforms to reach space for universities, research institutions, private and governmental entities to perform a wide range of missions. This paper presents a survey into the design and implementation of an electrospray rail thruster, to be integrated to the CubeSat platform. The design investigated features propellant tanks for each individual thruster embedded inside the rail of a standard 1U CubeSat. The capabilities of utilizing the electrospray thruster as an attitude & determination control system was also investigated in which, a pointing accuracy …

Region Detection & Segmentation Of Nissl-Stained Rat Brain Tissue, Alexandro Arnal

Open Access Theses & Dissertations

People who analyze images of biological tissue rely on the segmentation of structures as a preliminary step. In particular, laboratories studying the rat brain delineate brain regions to position scientific findings on a brain atlas to propose hypotheses about the rat brain and, ultimately, the human brain. Our work intersects with the preliminary step of delineating regions in images of brain tissue via computational methods.

We investigate pixel-wise classification or segmentation of brain regions using ten histological images of brain tissue sections stained for Nissl substance. We present a deep learning approach that uses the fully convolutional neural network, U-Net, …

Optimized Learning Using Fuzzy-Inference-Assisted Algorithms For Deep Learning, Miroslava Barua

Open Access Theses & Dissertations

For years, researchers in Artificial Intelligence (AI) and Deep Learning (DL) observed that performance of a Deep Learning Network (DLN) could be improved by using larger and larger datasets coupled with complex network architectures. Although these strategies yield remarkable results, they have limits, dictated by data quantity and quality, rising costs by the increased computational power, or, more frequently, by long training times on networks that are very large. Training DLN requires laborious work involving multiple layers of densely connected neurons, updates to millions of network parameters, while potentially iterating thousands of times through millions of entries in a big …

What Makes Gpcrs From Different Families Bind To The Same Ligand?, Kwabena Owusu Dankwah

Open Access Theses & Dissertations

G protein-coupled receptors (GPCRs) are the largest class of cell-surface receptor proteins with important functions in signal transduction and often serve as therapeutic drug targets. With the rapidly growing public data on three-dimensional (3D) structures of GPCRs and GPCR-ligand interactions, computational prediction of GPCR ligand binding becomes a practical option for high throughput screening and other experimental approaches during the beginning phases of ligand discovery. In this work, we set out to computationally uncover and understand the binding of a single ligand to GPCRs from several different families. We analyzed the sequences and 3D structures of GPCRs from various families …

A Thematic Analysis Of Resilient Experiences Of People Who Use Drugs And Are Living With Hiv Adhering To Hiv Medicine, Valeria Duenas

Open Access Theses & Dissertations

Human immunodeficiency virus (HIV) is a disease acquired through sex, from mother to child, sharing needles, and open wound exposure to the blood-borne virus. The disease leads to the rapid weakening of the immune system which renders the individual vulnerable to various opportunistic infections, cancer, disease progression into acquired immunodeficiency virus (AIDS), and possibly death. Unfortunately, US Latinos are disproportionately affected by HIV as they account for nearly 30% of all new HIV infections. A subpopulation disproportionately affected also are people who inject drugs (PWID) which account for 1 in 10 HIV diagnosis in the U.S. Modern medicine has allowed …

Engineering 3d Bioprinted Cardiac Spheroidal Droplets With Cardiomyocytes And Cardiac Fibroblasts For Tissue Engineering And Drug Cytotoxicity Studies, Raven El Khoury

Open Access Theses & Dissertations

Engineering is the supreme human endeavor that involves harnessing the scientific understanding of the natural world to design and invent objects to improve the society around us. Biomedical engineering is the implementation of concepts acquired from engineering in biology and medicine that aims to improve human health through the integration of engineering with biomedical sciences. The mission of a biomedical engineer is to develop technologies that help advance the quality of peopleâ??s health using various tools and materials with one passion and goal: making the patient's life longer and easier. Tissue engineering is developed from the field of biomaterials and …

Achieving Safe Use Of Advanced Materials In Drinking Water Through Novel Nano Analytics And Enabling Electrification Using Green Catalyst, Kenneth Ray Flores

Open Access Theses & Dissertations

The accumulation of engineered nanomaterials (ENMs) in environmental sectors will continue to increase as more applications are discovered for their unique properties and characteristics. Additionally, the presence of nanomaterials in the environment becomes exacerbated as more consumer products containing nanoparticles are approved for use. It is debated whether the toxic effects of nanoparticles stem from the particles themselves, ionic species, or formation of secondary particles. Therefore, understanding the behavior of nanoparticles in the environment becomes key to discerning the toxicological effects of nanoparticles. Many advancements have been made with ICP-MS to understand the behavior of nanoparticles in the environmental systems, …

Online/Incremental Learning To Mitigate Concept Drift In Network Traffic Classification, Alberto R. De La Rosa

Open Access Theses & Dissertations

Communication networks play a large role in our everyday lives. COVID19 pandemic in 2020 highlighted their importance as most jobs had to be moved to remote work environments. It is possible that the spread of the virus, the death toll, and the economic consequences would have been much worse without communication networks. To remove sole dependence on one equipment vendor, networks are heterogeneous by design. Due to this, as well as their increasing size, network management has become overwhelming for network managers. For this reason, automating network management will have a significant positive impact. Machine learning and software defined networking …

Nano-Engineered Soft Magnets: Potential Application In Water Treatment, Hyperthermia And Molecular (Organic) Magnets, Yohannes Weldemariam Getahun

Open Access Theses & Dissertations

Scrutinizing the remarkable and tunable properties of magnetic materials at a nanoscale size "There's Plenty of Room at the Bottom..." Richard Feynman, this study attempts to find sustainable solutions to some of the deteriorating environmental, health, and energy problems the world is encountering. Due to their simple preparation, surface adaptability, and tunable magnetic and optical properties, magnetic nanoparticles have been extensively investigated in water treatment, cancer therapy, data storage, and more. However, relying on non-reusable and chemical-based treatment agents in water, complex and costly cancer treatment procedures and molecular magnets that operate far below room temperature limited those attempts from …

Evaluation Of Effect Of Preprocessing Algorithms On Resting State Fmri Data, Hortencia Josefina Hernandez

Open Access Theses & Dissertations

Graph theory modeling is a common modeling approach in neurobiology research studies. These models are useful since they describe patterns of connection for regions of interest in the brain using resting state fMRI images. The standard rule of thumb is to threshold the observed activation levels prior to model building. It is reasonable to assume that the use of this threshold affects the statistical distribution of commonly reported centrality metrics from the graph theory model, such as degree, betweenness, and closeness. In this study we examine the differential effect of using the standard approaches versus alternative direct thresholds and incorporation …

Direct Potable Reuse Piloting: Optimizing Chloramination, Operationalizing Ultrafiltration, And Understanding Zero Liquid Discharge Options, Marcela Carolina Herrera

Open Access Theses & Dissertations

A pilot study was deployed at the John T. Hickerson Water Reclamation facility to analyze the viability of high recovery direct potable water reuse (DPR), aiming for zero liquid discharge (ZLD). This pilot consists of a chloramination system and ultrafiltration (UF) as pretreatment for reserve osmosis (RO) followed by UV-peroxide, granular activated carbon (GAC), and concentrate-enhanced recovery reverse osmosis (CERRO). Stabilizing the chloramination and UF system was the first step to ensure efficiency during the downstream processes. The formation of monochloramine is essential for the mitigation of biofouling of the UF membranes. The formation of monochloramine occurs by specific liquid …

Investigation Into The Economic Viability Of Industry 4.0 Practices In A Small Start-Up Setting: A Case Study, Joseph Lindley

Open Access Theses & Dissertations

Industry 4.0 has been a hot button topic since the first rumouringâ??s of a fourth industrial revolution taking place in the early 2010s. Since that time many companies have attempted to transform their process, procedures, and systems to become streamlined, efficient, and overall, more profitable. An example of this can be seen in companies such as Microsoft and IBM, Mitsubishi and Siemens who have gained a stronger foothold in their respective markets by their efficient implementation of Industry 4.0. Before we can address how small start-up companies can begin to compete with these behemoths, we must address the question; what …

Intelligent Autonomous Inspections Using Deep Learning And Detection Markers, Alejandro Martinez Acosta

Open Access Theses & Dissertations

Inspection of industrial and scientific facilities is a crucial task that must be performed regularly. These inspections tasks ensure that the facilityâ??s structure is in safe operational conditions for humans. Furthermore,the safe operation of industrial machinery, is dependent on the conditions of the environment. For safety reasons, inspections for both structural integrity and equipment is often manually performed by operators or technicians. Naturally, this is often a tedious and laborious task. Additionally, buildings and structures frequently contain hard to reach or dangerous areas, which leads to the harm, injury or death of humans. Autonomous robotic systems offer an attractive solution …

Autoantibody Against Tumor-Associated Antigens As Diagnostic Biomarkers In Hispanic Patients With Hepatocellular Carcinoma, Yangcheng Ma

Open Access Theses & Dissertations

Liver cancer is one of the most prevalent malignancies, in which hepatocellular carcinoma (HCC) takes up more than 80% of liver cancer cases. Early diagnosis and treatment are practical approaches to impede HCC progression. Identifying and classifying autoantibodies against tumor-associated antigens (TAAs) have long been interested in cancer diagnosis, especially for HCC. Circulating anti-TAA autoantibodies amplify the antigen expression and are more stable in blood, guaranteeing anti-TAA autoantibodies as valid diagnostic biomarkers in clinical application. Nonetheless, very few studies had focused on the Hispanic HCC group, which might retain distinct etiological risk factors compared to other ethnicities. The high incidence …

A Case Study In Design, Construction, And Operation Of A Meromictic Solar Pond In Texas, Usa, Bianca Paola Meneses Brassea

Open Access Theses & Dissertations

Over the last four decades, meromictic solar ponds have been the subject of limnological studies and engineering research. A case of practical interest is the salinity gradient solar pond (SGSP). SGSP science and technologies have been systemically advanced in El Paso, Texas. This dissertation aims to share lessons learned in designing, constructing, and operating the El Paso Solar Pond, a NaCl-based solar pond that achieved high-temperature performance over two decades, commencing in 1984. Many of the practical lessons learned have not been published and are thus not readily available in archival journals, and this contribution provides a remedy. The value …

The Real Face Of Borderline Personality Organization Within Intimate Partner Violence, Adriana Isabel Patino

Open Access Theses & Dissertations

This study tests the relationship between IPV perpetration and victimization with BPO. Results indicate that, as predicted, BPO is positively associated with both IPV perpetration and victimization and is more prevalent in female perpetrators and victims than in male perpetrators and victims. However, contrary to what previous literature says, self-control does not show enough significance to state that it is one of the leading causes of IPV perpetrated by those who present traits of BPO. In addition, results also indicate that having suffered from physical abuse during childhood diminishes the probability of perpetrating IPV. To fully understand these results, future …

Biology And Epidemiology Of Dengue Viruses In The El Paso And The Surrounding Usa And Mexico Border Communities, Pedro Miguel Palermo Infante

Open Access Theses & Dissertations

Dengue is considered one of the most important human arboviral diseases worldwide. Dengue cases have increased in the last three decades in the Americas, especially along the United States (US)- Mexico (MX) border region, where the main vector of dengue, Aedes aegypti mosquito, is widely distributed. Explosive outbreaks of dengue in northern Mexico have been associated with imported and local transmission of dengue in the US border communities, especially in the Southeast Texas area, also known as Rio Grande Valley. Due to the unknown if dengue virus (DENV) is present in other areas in the US border located west of …

A Comparison Of Spatial-Temporal Gait Variability In Over-Ground And Treadmill Walking In Children With Autism, René Ubaldo Sanchez

Open Access Theses & Dissertations

Children with Autism Spectrum Disorder (ASD) experience an increased sedentary lifestylewhich results in elevated risk for being overweight and obese. A low-cost and viable solution to increase physical activity while accommodating for social-behavioral barriers such as stereotypy, aggressive, or non-verbal characteristics, may be treadmill-related interventions. Gait variability during treadmill ambulation has not been extensively researched in the ASD population, therefore the aim of this study was to quantify the acute effects of treadmill usage on spatial-temporal gait parameter variability when compared to overground walking. Three-dimensional kinematic data were obtained through motion analysis where 5 children with ASD were outfitted with …