Digital Commons Network^™

A Quantitative Investigation Of The Impact Roll Has On The Percent Change In Position Of Breast Phantoms Of Various Volumes, Clayton N. Young

Masters Projects

The purpose of this study was to evaluate the effect of phantom size and level of roll on the percent change in position and percent of planned treatment volume (PTV) receiving prescription dose of breast phantoms. Due to their non-rigid physical properties, breasts being treated for radiation therapy are vulnerable to positional variability following a roll adjustment. Cone Beam Computed Tomography (CBCT) scans are commonly used to verify anatomical breast position, but they are not always reacquired after a roll correction is made. Treating a volume at a different position has the potential to compromise the intended dose distribution. Factors …

You Are What You Eat — Exploring The Microbiome Through Inquiry-Based Labs. Microbiome Lesson Plans, Karla S. Fuller

Open Educational Resources

If these commonly used spices have the ability to inhibit pathogenic bacterial growth, could they also potentially inhibit the growth of normal, harmless bacteria that live in your body? In this lab, we will test common bacteria for resistance to food additives.

Local Translation Across Neural Development: A Focus On Radial Glial Cells, Axons, And Synaptogenesis, Manasu Agrawal, Kristy Welshhans

Faculty Publications

In the past two decades, significant progress has been made in our understanding of mRNA localization and translation at distal sites in axons and dendrites. The existing literature shows that local translation is regulated in a temporally and spatially restricted manner and is critical throughout embryonic and post-embryonic life. Here, recent key findings about mRNA localization and local translation across the various stages of neural development, including neurogenesis, axon development, and synaptogenesis, are reviewed. In the early stages of development, mRNAs are localized and locally translated in the endfeet of radial glial cells, but much is still unexplored about their …

Gender Bias In The Classroom: An In-Service To Create Change, David Schmidt

Masters Projects

Female students are not often treated the same way as male students in the elementary classroom. Teachers bring their gender bias into their daily practices and unknowingly encourage male student towards STEM subjects and female students away from STEM subjects. This results in a gender gap in STEM careers. This project aims to combat gender bias by holding an in-service. Research supports the idea that once bias has been addressed in individuals, they are less likely to hold on to their bias. Participants will take a test to discover their bias, be presented with relevant research, read an article on …

What Are The Effects Of Worldwide Trade On Marine Life?, Flávia Costa

International Programs

No abstract provided.

Roles Of A Bradykinin Storm And A Cytokine Storm In Covid-19 Cases, Nouha H. Odeh

Honors College Theses

In the light of recent events, it is imperative to understand the key inflammatory response elements that appear to be the source of more severe ailments resulting from a SARS-CoV-2 viral infection known as Covid-19 The more severe cases of Covid-19 are characterized by a severe inflammatory response resulting in tissue damage. My research proposal aims to investigate the two possible culprits of this response: a bradykinin (BK) storm and an interleukin-6 (IL-6) mediated cytokine storm. In both systems respectively, the excess release of these signals subsequently signals the production of even more of the same response element, resulting in …

Swir Emissive Rosindolizine Dyes With Nanoencapsulation In Water Soluble Dendrimers, Satadru Chatterjee, William E. Meador, Cameron Smith, Indika Chandrasiri, Mohammad Farid Zia, Jay Nguyen, Austin Dorris, Alex Flynt, Davita L. Watkins, Nathan I. Hammer, Jared H. Delcamp

Faculty Publications

Shortwave infrared (SWIR) emission has great potential for deep-tissue in vivo biological imaging with high resolution. In this article, the synthesis and characterization of two new xanthene-based RosIndolizine dyes coded ^PhRosIndz and ^tolRosIndz is presented. The dyes are characterized via femtosecond transient absorption spectroscopy as well as steady-state absorption and emission spectroscopies. The emission of these dyes is shown in the SWIR region with peak emission at 1097 nm. ^TolRosIndz was encapsulated with an amphiphilic linear dendritic block co-polymer (LDBC) coded 10-PhPCL-G3 with high uptake yield. Further, cellular toxicity was examined in vitro using HEK (human embryonic …

The Exploration Of Novel Synthetic Methods Of Biologically Relevant Nitrogen And Halogen Containing Molecules, Rebekah Erin Strong

Theses and Dissertations

Visible light has become a highly useful, and regarded, tool to the organic chemist. The additions and transformations of an abundance of molecules can be achieved with the use of visible light and photocatalysts, when appropriate. More specifically compounds that contain nitrogen, halogens, or both are highly useful structures in nearly every chemical industry. They are elements found in naturally occurring molecules and have the capacity to mimic biologically active and relevant structures. This makes them useful targets for pharmaceutical compounds. Bromine and chlorine can act as leaving groups; this property makes molecules with these elements reactive and thus able …

Molecular Characterization And Expression Of Cytochrome P450 Aromatase In Atlantic Croaker Brain: Regulation By Antioxidant Status And Nitric Oxide Synthase During Hypoxia Stress, Md Saydur Rahman, Peter Thomas

School of Earth, Environmental, & Marine Sciences Faculty Publications

We have previously shown that nitric oxide synthase (NOS, an enzyme) is significantly increased during hypoxic stress in Atlantic croaker brains and modulated by an antioxidant (AOX). However, the influence of NOS and AOX on cytochrome P450 aromatase (AROM, CYP19a1, an enzyme) activity on vertebrate brains during hypoxic stress is largely unknown. In this study, we characterized brain AROM (bAROM, CYP19a1b) cDNA in croaker and examined the interactive effects of hypoxia and a NOS-inhibitor or AOX on AROM activity. The amino acid sequence of croaker bAROM cDNA is highly homologous (76–80%) to other marine teleost bAROM cDNAs. Both real-time PCR …

New Forces Influencing Savanna Conservation: Increasing Land Prices Driven By Gentrification And Speculation At The Landscape Scale, Peter Tyrrell, Robin Naidoo, David W. Macdonald, Johan T. Du Toit

Wildland Resources Faculty Publications

Land transformation reduces biodiversity and regional sustainability, with land price being an indicator of the opportunity cost to a landowner of resisting land conversion. However, reliable spatially explicit databases of current land prices are generally lacking in developing countries. We used tools from data science to scrape 1,487 georeferenced land prices in southern Kenya from the internet. Prices were higher for land near cities and in areas of high agricultural productivity, but also around the Maasai Mara National Reserve. Predicted land prices ranged from US$662 to US$4,618,805 per acre. Land speculation associated with expanding urbanization increases the opportunity and acquisition …

Quantum Grover's Oracles With Symmetry Boolean Functions, Peng Gao

Dissertations and Theses

Quantum computing has become an important research field of computer science and engineering. Among many quantum algorithms, Grover's algorithm is one of the most famous ones. Designing an effective quantum oracle poses a challenging conundrum in circuit and system-level design for practical application realization of Grover's algorithm.

In this dissertation, we present a new method to build quantum oracles for Grover's algorithm to solve graph theory problems. We explore generalized Boolean symmetric functions with lattice diagrams to develop a low quantum cost and area efficient quantum oracle. We study two graph theory problems: cycle detection of undirected graphs and generalized …

Responding To Parents' Questions Regarding Polysorbate 80, Aluminum, And Thimerosal In Vaccines, Elli Hugh, Beth Luthy

Student Works

Vaccines save millions of lives worldwide every year. Nevertheless, misinformation regarding vaccine ingredients circulates on various media platforms and may negatively influence parental decisions regarding childhood vaccinations. Three vaccine ingredients commonly associated with parental vaccine concerns include polysorbate 80, aluminum, and thimerosal. Common misconceptions about polysorbate 80 and neurological sequela exist within the vaccine hesitant community. Additionally, aluminum has been incorrectly connected to chronic disease in children. Though proven that thimerosal does not cause autism, vaccine critics have now inaccurately reformed the argument claiming that it is the combination of thimerosal and aluminum that causes autism. The purpose of this …

Validating Deep Learning Inference During Chest X-Ray Classification For Covid-19 Screening., Robbie Sadre, Baskaran Sundaram, Sharmila Majumdar, Daniela Ushizima

Department of Radiology Faculty Papers

The new coronavirus unleashed a worldwide pandemic in early 2020, and a fatality rate several times that of the flu. As the number of infections soared, and capabilities for testing lagged behind, chest X-ray (CXR) imaging became more relevant in the early diagnosis and treatment planning for patients with suspected or confirmed COVID-19 infection. In a few weeks, proposed new methods for lung screening using deep learning rapidly appeared, while quality assurance discussions lagged behind. This paper proposes a set of protocols to validate deep learning algorithms, including our ROI Hide-and-Seek protocol, which emphasizes or hides key regions of interest …

Simple Energy Balance Or Microbiome For Childhood Obesity Prevention?, Tom Baranowski, Kathleen J Motil

Children’s Nutrition Research Center Staff Publications

Obesity prevention interventions generally have either not worked or had effects inadequate to mitigate the problem. They have been predicated on the simple energy balance model, which has been severely questioned by biological scientists. Numerous other etiological mechanisms have been proposed, including the intestinal microbiome, which has been related to childhood obesity in numerous ways. Public health research is needed in regard to diet and the microbiome, which hopefully will lead to effective child obesity prevention.

Exercise To Reduce Chemotherapy-Induced Peripheral Nephropathy: A Pilot Rct, Grace A. Kanzawa-Lee

Dissertations

Oxaliplatin-induced peripheral neuropathy (OIPN) occurs in 85-95% of patients receiving FOLFOX or FOLFIRINOX, oxaliplatin-based chemotherapy for invasive gastrointestinal (GI) cancers. Persistent OIPN can impair long-term quality of life (QOL). No OIPN cures are known. Aerobic physical activity (PA) may reduce OIPN by enhancing circulation and re-distributing neurotoxic oxaliplatin away from vulnerable neurons. However, no trials have evaluated solely aerobic exercise for OIPN. This dissertation reports the results of a 1) literature review on exercise for chemotherapy-induced peripheral neuropathy, and 2) pilot randomized controlled trial (RCT) of brisk walking for OIPN in FOLFOX/FOLFIRINOX-receiving GI cancer survivors. The "MI-Walk Intervention" - an …

A Phase Ib/Iia Clinical Trial Of Dantrolene Sodium In Patients With Wolfram Syndrome, Damien Abreu, Stephen I. Stone, Toni S. Pearson, Robert C. Bucelli, Ashley N. Simpson, Stacy Hurst, Cris M. Brown, Kelly Kries, Chinyere Onwumere, Hongjie Gu, James Hoekel, Lawrence Tychsen, Gregory P. Van Stavern, Neil H. White, Bess A. Marshall, Tamara Hershey, Fumihiko Urano

Open Access Publications

BACKGROUNDWolfram syndrome is a rare ER disorder characterized by insulin-dependent diabetes mellitus, optic nerve atrophy, and progressive neurodegeneration. Although there is no treatment for Wolfram syndrome, preclinical studies in cell and rodent models suggest that therapeutic strategies targeting ER calcium homeostasis, including dantrolene sodium, may be beneficial.METHODSBased on results from preclinical studies on dantrolene sodium and ongoing longitudinal studies, we assembled what we believe is the first-ever clinical trial in pediatric and adult Wolfram syndrome patients with an open-label phase Ib/IIa trial design. The primary objective was to assess the safety and tolerability of dantrolene sodium in adult and pediatric …

Genetic Population Dynamics Of The Critically Endangered Scalloped Hammerhead Shark (Sphyrna Lewini) In The Eastern Tropical Pacific Ocean, Sydney P. Harned

All HCAS Student Capstones, Theses, and Dissertations

The scalloped hammerhead shark, Sphyrna lewini, is a Critically Endangered, migratory species known for its tendency to form large aggregations of mostly adult females, especially in the heavily-fished Eastern Tropical Pacific (ETP) Ocean. This species forms iconic, visually spectacular, seasonal aggregations in the northern Galápagos Islands, and it is hypothesized based on telemetry studies that pregnant females from these aggregations migrate to mainland coastal nurseries for parturition. This study investigated the population genetic dynamics of the scalloped hammerhead across most of its coastal and offshore distribution (Mexico to Ecuador) in the ETP, focusing on young-of-the-year animals sampled from nursery …

Assessing The Short-Term Effects Of Translocation On Freshwater Mussels: Is Habitat Or Water Quality More Important?, Joshua D. Arnold

Masters Theses

Freshwater mussels (Order: Unionida) are very important to the function of aquatic ecosystems and are typically indicators of good water quality. They provide a valuable link between the water column and the benthic substrate in which they live and are a valuable food resource for many species of animals. However, most species native to North America are currently threatened with extinction, to the point that more than 70% of native freshwater mussels are listed as either threatened or endangered at the state or federal level. The cause of this decline can be attributed to historical over exploitation, habitat alteration, and …

Parp Inhibitor Tolerability And Impact On Progression-Free Survival In Patients With High-Grade, Ovarian Carcinoma With Brain Metastasis: A Case-Series, Alexander Mohler, Belkys Salinas, Rupesh Kotecha, Karissa Nazur, Yazmin Odia, Nicholas Lambrou

All Publications

Brain metastases secondary to ovarian carcinoma is an uncommon but increasing phenomenon. PARP inhibitors (PARPi) are increasingly used as an adjunctive treatment in patients with central nervous system metastases (CNS). Historically brain metastases has a historically poor prognosis.

Five women with a mean age of 60.4 ± 7.6 years were included. All had stage IIIC/IV ovarian cancer and diagnosed with brain metastases at recurrence. Three underwent resection for oligometastatic disease followed by post-operative stereotactic radiosurgery (SRS), one had SRS without surgery, and one patient underwent whole brain radiotherapy for multiple metastases. Pathology was confirmed in those who were resected. Two …

The Distribution, Composition, And Management Of Drifting Fish Aggregating Devices (Dfads) In The North Atlantic Ocean, Erin E. Kimak

All HCAS Student Capstones, Theses, and Dissertations

Drifting Fish Aggregating Devices (dFADs) are a gear accessory utilized on a global scale by commercial fishers to increase catch size and efficiency of target pelagic fishes such as tuna and dolphinfish. Despite their widespread use, there are few scientific estimates of the total number of abandoned or beached dFADs in the Atlantic Ocean and Caribbean Basin or the compliance of dFAD use with t-RFMO recommendations. Previous studies have utilized the modeled drift trajectories of dFADs to predict beaching probability and location, but this study is the first of its kind, analyzing true beaching events. This study identifies the beaching …

Factors Associated With Interest In Psychiatry In Uk Medical Students: Qualitative Study, G Crowley, S Banerjee, L Page, S Daley

Peninsula Medical School

Aims and method This study aimed to explore factors that positively influence UK medical students’ interest in psychiatry. Delegates and committee members of the National Student Psychiatry Conference 2018 were invited to participate in individual semi-structured interviews. Nine interviews were conducted. Qualitative data were analysed using thematic analysis. Results: Four core themes emerged: psychiatry education and exposure, role of a psychiatrist, fitting in, and factors external to medical school. All students had some degree of interest in mental health before medical school, but placement and extra-curricular factors were strongly influential. Implications Interest in psychiatry may be promoted by facilitating student …

The Use And Effectiveness Of An Online Diagnostic Support System For Blood Film Interpretation: Comparative Observational Study, C Hutchinson, M Brereton, J Adams, La Salle B De, J Sims, K Hyde, R Chasty, R Brown, K Rees-Unwin, J Burthem

Peninsula Medical School

Background The recognition and interpretation of abnormal blood cell morphology is often the first step in diagnosing underlying serious systemic illness or leukemia. Supporting the staff who interpret blood film morphology is therefore essential for a safe laboratory service. This paper describes an open-access, web-based decision support tool, developed by the authors to support morphological diagnosis, arising from earlier studies identifying mechanisms of error in blood film reporting. The effectiveness of this intervention was assessed using the unique resource offered by the online digital morphology Continuing Professional Development scheme (DM scheme) offered by the UK National External Quality Assessment Service …

Modulation Of The Effects Of Class Ib Antiarrhythmics On Cardiac Nav1.5-Encoded Channels By Accessory Navβ Subunits, Wandi Zhu, Wei Wang, Paweorn Angsutararux, Rebecca L. Mellor, Lori L. Isom, Jeanne M. Nerbonne, Jonathan R. Silva

Open Access Publications

Native myocardial voltage-gated sodium (NaV) channels function in macromolecular complexes comprising a pore-forming (α) subunit and multiple accessory proteins. Here, we investigated the impact of accessory NaVβ1 and NaVβ3 subunits on the functional effects of 2 well-known class Ib antiarrhythmics, lidocaine and ranolazine, on the predominant NaV channel α subunit, NaV1.5, expressed in the mammalian heart. We showed that both drugs stabilized the activated conformation of the voltage sensor of domain-III (DIII-VSD) in NaV1.5. In the presence of NaVβ1, the effect of lidocaine on the DIII-VSD was enhanced, whereas the effect of ranolazine was abolished. Mutating the main class Ib …

Taspase1 Orchestrates Fetal Liver Hematopoietic Stem Cell And Vertebrae Fates By Cleaving Tfiia, Hidetaka Niizuma, Adam C. Searleman, Shugaku Takeda, Scott A. Armstrong, Christopher Y. Park, Emily H. Cheng, James J. Hsieh

Open Access Publications

Taspase1, a highly conserved threonine protease encoded by TASP1, cleaves nuclear histone-modifying factors and basal transcription regulators to orchestrate diverse transcription programs. Hereditary loss-of-function mutation of TASP1 has recently been reported in humans as resulting in an anomaly complex syndrome, which manifests with hematological, facial, and skeletal abnormalities. Here, we demonstrate that Taspase1-mediated cleavage of TFIIAα-β, rather than of MLL1 or MLL2, in mouse embryos was required for proper fetal liver hematopoiesis and correct segmental identities of the axial skeleton. Homozygous genetic deletion of Taspase1 disrupted embryonic hematopoietic stem cell self-renewal and quiescence states and axial skeleton fates. Strikingly, mice …

Health Website Evaluation - An Aboriginal And Torres Strait Islander Perspective: Assessing Quality And Cultrability Of Health Websites In A Covid-19 Pandemic: A Literature Review., Selma Kum Sing, Daniel Mcdonough, James Charles

Australian Indigenous HealthBulletin

Introduction

Health Websites have been used to improve the health and wellbeing of people since the internet was widely available to the world’s populations. The development of websites by health practitioners, hospitals, and governments has continued to grow over the past 20 years. Due to the restriction of movement and gatherings for populations globally caused by Covid-19, there has been a reliance on health information being disseminated via health websites. However, there has been little investigation into the appropriateness of health websites for Aboriginal and Torres Strait Islander communities.

Aim

Review literature on digital resources and evaluate health websites based …

A Bibliometric Analysis Of Research Output, Citation Analysis, Author Productivity, Collaborations, And Institutions Of Repute In Smartphone Health Applications (Sphealth Apps)., Dwight Figueiredo, Milind Chunkhare

Library Philosophy and Practice (e-journal)

Due to rapid smartphone health application growth and usage, we analyzed literature published in the field of spHealth Apps. SciVerse Scopus was used as the database of choice for this study. Research productivity, collaborations, citation analysis, authors and institutions were presented using well established bibliometric indicators.

During the study period (2000-20), 4546 documents were published in total. The average count of documents per year was 227. English was the language predominantly used in the retrieved documents (97%). The h- index of the retrieved documents was 137. Author submission of keywords used in documents pertaining to sp- Health Apps included human, …

Townsville Tropical Savannas — An Innovative Approach To Urban‐Rural Education And Ecotourism, Greg A. Bruce

IGC Proceedings (1977-2023)

No abstract provided.

Modelling The Diffusion Of Innovation And Water Conservation Methods Through Social Networks In Semi‐Arid Rangelands, Paul Box, Yiheyis Maru

IGC Proceedings (1977-2023)

No abstract provided.

The Emerging Role Of Suppressors Of Cytokine Signaling (Socs) In The Development And Progression Of Leukemia, Esra'a Keewan, Ksenia Matlawska-Wasowska

Pediatrics Research and Scholarship

Cytokines are pleiotropic signaling molecules that execute an essential role in cell-to-cell communication through binding to cell surface receptors. Receptor binding activates intracellular signaling cascades in the target cell that bring about a wide range of cellular responses, including induction of cell proliferation, migration, differentiation, and apoptosis. The Janus kinase and transducers and activators of transcription (JAK/STAT) signaling pathways are activated upon cytokines and growth factors binding with their corresponding receptors. The SOCS family of proteins has emerged as a key regulator of cytokine signaling, and SOCS insufficiency leads to constitutive activation of JAK/STAT signaling and oncogenic transformation. Dysregulation of …

Interview With Mary Fry On August 8, 2021, Mary Fry

Oral History Interviews

No abstract provided.