Digital Commons Network^™

Nontyphoidal Salmonella Disease: Current Status Of Vaccine Research And Development, Sharon M. Tennant, Calman A. Maclennan, Raphael Simon, Laura B. Martin, M. Imran Khan

Centre of Excellence in Women and Child Health

Among more than 2500 nontyphoidal Salmonella enterica (NTS) serovars, S. enterica serovar Typhimurium and S. enterica serovar Enteritidis account for approximately fifty percent of all human isolates of NTS reported globally. The global incidence of NTS gastroenteritis in 2010 was estimated to be 93 million cases, approximately 80 million of which were contracted via food-borne transmission. It is estimated that 155,000 deaths resulted from NTS in 2010. NTS also causes severe, extra-intestinal, invasive bacteremia, referred to as invasive nontyphoidal Salmonella (iNTS) disease. iNTS disease usually presents as a febrile illness, frequently without gastrointestinal symptoms, in both adults and children. Symptoms …

Low Oxytocin And Melatonin Levels And Their Possible Role In The Diagnosis And Prognosis In Iraqi Autistic Children, Haidar A. Abdulamir, Omar F. Abdul-Rasheed, Emad A. Abdulghani

Saudi Medical Journal

Objectives: To test the possible association between oxytocin and melatonin levels with the severity of social and cognitive dysfunctions, and to study the correlation between these parameters in children with autism. Methods: A case-control study was carried out in the Department of Chemistry and Biochemistry, College of Medicine, Al-Nahrain University, Baghdad, Iraq. The study was performed on 60 male autistic patients recruited from the Pediatric Department of Al-Sader General Hospital, Baghdad, Iraq between November 2014 and April 2015. The levels of oxytocin and melatonin were measured in the serum of these autistic male patients, and categorized as mild, moderate, and …

Mycobacterium Tuberculosis Lineage 4 Comprises Globally Distributed And Geographically Restricted Sublineages, David Stucki, Daniela Brites, Leïla Jeljeli, Mireia Coscolla, Gunturu Revathi

Pathology, East Africa

Generalist and specialist species differ in the breadth of their ecological niches. Little is known about the niche width of obligate human pathogens. Here we analyzed a global collection of Mycobacterium tuberculosis lineage 4 clinical isolates, the most geographically widespread cause of human tuberculosis. We show that lineage 4 comprises globally distributed and geographically restricted sublineages, suggesting a distinction between generalists and specialists. Population genomic analyses showed that, whereas the majority of human T cell epitopes were conserved in all sublineages, the proportion of variable epitopes was higher in generalists. Our data further support a European origin for the most …

The House Under A Crazy Star, Aaron Teves, Fleet Library, Special Collections

3rd Student Artists' Book Contest 2017

$300 MEMORIAL AWARD

Online Trust Cues: Perceptions And Application, Antonina A. Bauman

Journal of International Technology and Information Management

This qualitative study analyzes perceptions of online trust cues as identified by shoppers from three countries: Germany, Russia, and the USA. A novel approach of the repertory grid method is used to study online trust cues in business-to-consumers commercial online transactions. This study resulted in the list of web site elements and features that consumers recognize as trust cues and use to evaluate e-vendor’s trustworthiness. Findings show that out of fourteen categories of online trust cues, identified by online shoppers, three categories of online trust cues are found to be common across three cultures while eleven categories are culture specific. …

Hsaf-Induced Antifungal Effects In Candida Albicans Through Ros-Mediated Apoptosis, Yanjiao Ding, Zhenyu Li, Yaoyao Li, Chunhua Lu, Haoxin Wang, Yuemao Shen, Liangcheng Du

Department of Chemistry: Faculty Publications

Heat-stable antifungal factor (HSAF) belongs to polycyclic tetramate macrolactams (PTMs), which inhibits many fungal pathogens and is effective in inhibiting Candida albicans (C. albicans). In this study, we found that HSAF induced the apoptosis of C. albicans SC5314 through inducing the production of reactive oxygen species (ROS). Nevertheless, we validated the efficacy of HSAF against candidiasis caused by C. albicans in a murine model in vivo,and HSAF significantly improved survival and reduced fungal burden compared to vehicles. A molecular dynamics (MD) simulation was also investigated, revealing the theoretical binding mode of HSAF to the β-tubulin of C. …

Close Encounters With Creative Chemical Thinking: An Outreach Presentation Using Movie Clips About The Elemental Composition Of Aliens And Extraterrestrial Minerals, Mark A. Griep, Marjorie L. Mikasen

Department of Chemistry: Faculty Publications

To introduce more chemistry into a middle and high school bioengineering camp experience, we developed an educational and entertaining presentation that examines the chemistry in movies about aliens and minerals from outer space. Our goal was to help the campers to think creatively about the bioengineering projects they are doing and about its chemistry. After watching each movie clip, we explain whether the chemistry in the clip is real or fake, and then describe the real chemistry that inspired it. The chemical touchstone for the presentation is the periodic table. First, the campers learn that aliens in five movies are …

Flexble Robotic Actuators, Aaron D. Mazzeo, Stephen A. Morin, Robert F. Shepherd, George M. Whitesides, William B. Kalb

Department of Chemistry: Faculty Publications

Some embodiments of the disclosed subject matter includes a laminated robotic actuator. The laminated robotic actuator includes a strain-limiting layer comprising a flexible, non extensible material in the form of a sheet or thin film, a flexible inflatable layer in the form of a thin film or sheet in facing relationship with the Strain-limiting layer, wherein the inflatable layer is selectively adhered to the strain-limiting layer, and wherein a portion of an un-adhered region between the strain-limiting layer and the inflatable layer defines a pressurizable channel, and at least one fluid inlet in fluid communication with the pressurizable channel. The …

Nested Species- Rich Networks Of Scavenging Vertebrates Support High Levels Of Interspecific Competition, Esther Sebastián-González, Marcos Moleón, Jean P. Gibert, Francisco Botella, Patricia Mateo-Tomás, Pedro P. Olea, Paulo R. Guimarães Jr., José A. Sánchez-Zapata

School of Biological Sciences: Faculty Publications

Disentangling the processes that shape the organization of ecological assemblages and its implications for species coexistence is one of the foremost challenges of ecology. Although insightful advances have recently related community composition and structure with species coexistence in mutualistic and antagonistic networks, little is known regarding other species assemblages, such as those of scavengers exploiting carrion. Here we studied seven assemblages of scavengers feeding on ungulate carcasses in mainland Spain. We used dynamical models to investigate if community composition, species richness and structure (nestedness) affect species coexistence at carcasses. Scavenging networks showed a nested pattern in sites where highly efficient, …

Molecular Mechanism Of The Priming By Jasmonic Acid Of Specific Dehydration Stress Response Genes In Arabidopsis, Ning Liu, Zoya Avramova

School of Biological Sciences: Faculty Publications

Background: Plant genes that provide a different response to a similar dehydration stress illustrate the concept of transcriptional ‘dehydration stress memory’. Pre-exposing a plant to a biotic stress or a stress-signaling hormone may increase transcription from response genes in a future stress, a phenomenon known as ‘gene priming’. Although known that primed transcription is preceded by accumulation of H3K4me3 marks at primed genes, what mechanism provides for their appearance before the transcription was unclear. How augmented transcription is achieved, whether/how the two memory phenomena are connected at the transcriptional level, and whether similar molecular and/or epigenetic mechanisms regulate them are …

The Differentiation And Protective Function Of Cytolytic Cd4 T Cells In Influenza Infection, Deborah M. Brown, Anna T. Lampe, Aspen M. Workman

School of Biological Sciences: Faculty Publications

CD4 T cells that recognize peptide antigen in the context of class II MHC can differentiate into various subsets that are characterized by their helper functions. However, increasing evidence indicates that CD4 cells with direct cytolytic activity (CD4 CTL) play a role in chronic as well as acute infections, such as influenza A virus (IAV) infection. In the last couple of decades, techniques to measure the frequency and activity of these cytolytic cells has demonstrated their abundance in infections, such as human immunodeficiency virus, mouse pox, murine gamma herpes virus, cytomegalovirus, Epstein–Barr virus, and influenza among others. We now appreciate …

Measuring The Robustness Of Network Community Structure Using Assortativity, Daizaburo Shizuka, Damien R. Farine

School of Biological Sciences: Faculty Publications

The existence of discrete social clusters, or ‘communities’, is a common feature of social networks in human and nonhuman animals. The level of such community structure in networks is typically measured using an index of modularity, Q. While modularity quantifies the degree to which individuals associate within versus between social communities and provides a useful measure of structure in the social network, it assumes that the network has been well sampled. However, animal social network data is typically subject to sampling errors. In particular, the associations among individuals are often not sampled equally, and animal social network studies are often …

Effects Of Temporal Variation In Temperature And Density Dependence On Insect Population Dynamics, C. V. Haridas, Lance J. Meinke, Bruce E. Hibbard, Blair D. Siegfried, Brigitte Tenhumberg

School of Biological Sciences: Faculty Publications

Understanding the effects of environmental variation on insect populations is important in light of predictions about increasing climatic variability. This paper uses the univoltine western corn rootworm (WCR, Diabrotica virgifera virgifera LeConte) as a case study and employs deterministic and stochastic modeling to evaluate how insect population dynamics is shaped by density-dependent survival and annual variation in temperature, which are key in regulating insect populations. Field data showed that larval survival varied significantly between years but was constant for a range of densities. Survival dropped only beyond a threshold density, a feature resembling generalized Ricker functions used in modeling density-dependent …

Pch1 Integrates Circadian And Light- Signaling Pathways To Control Photoperiod-Responsive Growth In Arabidopsis, He Huang, Chan Yul Yoo, Rebecca Bindbeutel, Jessica Goldsworthy, Allison Tielking, Sophie Alvarez, Michael J. Naldrett, Bradley S. Evans, Meng Chen, Dmitri A. Nusinow

Nebraska Center for Biotechnology: Faculty and Staff Publications

Plants react to seasonal change in day length through altering physiology and development. Factors that function to harmonize growth with photoperiod are poorly understood. Here we characterize a new protein that associates with both circadian clock and photoreceptor components, named PHOTOPERIODIC CONTROL OF HYPOCOTYL1 (PCH1). pch1 seedlings have overly elongated hypocotyls specifically under short days while constitutive expression of PCH1 shortens hypocotyls independent of day length. PCH1 peaks at dusk, binds phytochrome B (phyB) in a red light-dependent manner, and co-localizes with phyB into photobodies. PCH1 is necessary and sufficient to promote the biogenesis of large photobodies to maintain an …

Unraveling The Consequences Of The Terminal Pleistocene Megafauna Extinction On Mammal Community Assembly, Felisa A. Smith, Catalina P. Tomé, Emma A. Elliott Smith, S. Kathleen Lyons, Seth D. Newsome, Thomas W. Stafford

School of Biological Sciences: Faculty Publications

Recent studies connecting the decline of large predators and consumers with the disintegration of ecosystems often overlook that this natural experiment already occurred. As recently as 14 ka, tens of millions of large-bodied mammals were widespread across the American continents. Within 1000 yr of the arrival of humans, ∼80% were extinct including all > 600 kg. While the cause of the late Pleistocene (LP) extinction remains contentious, largely overlooked are the ecological consequences of the loss of millions of large-bodied animals. Here, we examine the influence of the LP extinction on a local mammal community. Our study site is Hall’s Cave …

Comparative Anatomy Of The Bony Labyrinth Of Extant And Extinct Porpoises (Cetacea: Phocoenidae), Rachel A. Racicot, William Gearty, Naoki Kohno, John J. Flynn

School of Biological Sciences: Faculty Publications

The inner ear anatomy of cetaceans, now more readily accessible by means of nondestructive high-resolution X-ray computed tomographic (CT) scanning, provides a window into their acoustic abilities and ecological preferences. Inner ear labyrinths also may be a source for additional morphological characters for phylogenetic analyses. In this study, we explore digital endocasts of the inner ear labyrinths of representative species of extinct and extant porpoises (Mammalia: Cetacea: Phocoenidae), a clade of some of the smallest odontocete cetaceans, which produce some of the highest-frequency clicks for biosonar and communication. Metrics used to infer hearing ranges based on cochlear morphology indicate that …

Political Neuroscience, Ingrid J. Haas

Department of Political Science: Faculty Publications

The field of political science has traditionally had close ties to disciplines like economics, history, and sociology. While political science has always been somewhat interdisciplinary in nature, in recent years this interdisciplinary approach has expanded to include biology, psychology, and neuroscience. This interest in the human sciences has led to the development of new subfields within political science, including biopolitics, political psychology, and political neuroscience (also called neuropolitics). What these new subfields have in common is an interest in individual human behavior and decision-making as an approach to understanding political behavior. While political science has traditionally focused on understanding politics …

Ovipositional Preference, Fidelity, And Fitness Of Drosophila Suzukii In A Co-Occurring Crop And Non-Crop Host System, Lauren M. Diepenbrock, Katharine A. Swoboda-Bhattarai, Hannah Burrack

Department of Entomology: Faculty Publications

Drosophila suzukii (Matsumura) is a devastating pest of soft-skinned fruits including blackberries and raspberries. Management of this pest is focused on preventing infestation in crops, but non-crop hosts may play an important role in enabling D. suzukii to persist in the absence of cultivated hosts. Drosophila suzukii may also infest fruits of both crop and non-crop hosts concurrently. Our goals were to determine whether (1) D. suzukii prefers to oviposit in cultivated blackberry, Rubus L. subgenus rubus Watson, or American pokeweed, Phytolacca americana, a non-crop host commonly found along field edges, (2) D. suzukii prefers to oviposit into the same …

Parental Rnai Suppression Of Hunchback Gene To Control Hemipteran Pests, Blair D. Siegfried, Kenneth E. Narva, Kanika Arora, Sarah E. Worden, Chitvan Khajuria, Elane Fishilevich, Nicholas P. Storer, Meghan Frey, Ronda L. Hamm, Ana Velez

Department of Entomology: Faculty Publications

This disclosure concerns nucleic acid molecules and methods of use thereof for control of hemipteran pests through RNA interference-mediated inhibition of target coding and transcribed non-coding sequences in hemipteran pests. The dis closure also concerns methods for making transgenic plants that express nucleic acid molecules useful for the control of hemipteran pests, and the plant cells and plants obtained thereby.

A Forest Vulnerability Index Based On Drought And High Temperatures, David Mildrexler, Zhiqiang Yang, Warren B. Cohen, David M. Bell

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

Increasing forest stress and tree mortality has been directly linked to combinations of drought and high temperatures. The climatic changes expected during the next decades – large increases in mean temperature, increased heat waves, and significant long-term regional drying in the western USA – will likely increase chronic forest stress and mortality. The aim of this research is to develop and apply a new forest vulnerability index (FVI) associated with drought and high temperatures across the Pacific Northwest region (PNW; Oregon and Washington) of the USA during the MODIS Aqua era (since 2003). Our technique incorporates the alterations to canopy …

Pronghorn Habitat Suitability In The Texas Panhandle, Nathan P. Duncan, Samantha S. Kahl, Shawn S. Gray, Christopher J. Salice, Richard D. Stevens

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

Habitat quality is an important factor that can greatly affect wildlife populations. Pronghorn (Antilocapra americana) habitat in the Texas Panhandle, USA has been lost through growth of human settlements and agricultural lands. We determined the most pertinent environmental variables affecting habitat selection using multiple methods, including a search of peer-reviewed literature, expert opinion ranking, and habitat suitability modeling. We determined quality and extent of pronghorn habitat in the Texas Panhandle using the MAXENT modeling environment to build a presence-only habitat suitability model based on global positioning system (GPS) locations collected via aerial surveys. Our habitat suitability model indicated …

Pyrodiversity Promotes Avian Diversity Over The Decade Following Forest Fire, Morgan W. Tingley, Viviana Ruiz-Gutierrez, Robert L. Wilkerson, Christine A. Howell, Rodney B. Siegel

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

An emerging hypothesis in fire ecology is that pyrodiversity increases species diversity.We test whether pyrodiversity—defined as the standard deviation of fire severity—increases avian biodiversity at two spatial scales, and whether and how this relationship may change in the decade following fire. We use a dynamic Bayesian community model applied to a multi-year dataset of bird surveys at 1106 points sampled across 97 fires in montane California. Our results provide strong support for a positive relationship between pyrodiversity and bird diversity. This relationship interacts with time since fire, with pyrodiversity having a greater effect on biodiversity at 10 years post-fire than …

Diseases Of Trees In The Great Plains, Aaron D. Bergdahl, Alison Hill, Gerard C. Adams, Rachel A. Allison, John A. Appel, John Ball, James T. Blodgett, Kelly S. Burns, Whitney Cranshaw, Kelsey L. Dunnell, Mark L. Gleason, Mark O. Harrell, Thomas C. Harrington, Marcus B. Jackson, William R. Jacobi, Jennifer Juzwik, Megan M. Kennwlly, Les Koch, Jared M. Leboldus, Phillip A. Mason, Douglas L. Mcnew, Judith O'Mara, Hayley M. Nelson, Nicole Opbroek, Michael E. Ostry, Scott C. Redlin, Glen R. Stanosz, Laurie J. Stepanek, Ned Tisserat, Timothy C. Todd, James A. Walla, James J. Worrall, Simeon Wright

United States Department of Agriculture, Forest Service / University of Nebraska-Lincoln: Faculty Publications

Hosts, distribution, symptoms and signs, disease cycle, and management strategies are described for 84 hardwood and 32 conifer diseases in 56 chapters. Color illustrations are provided to aid in accurate diagnosis. A glossary of technical terms and indexes to hosts and pathogens also are included.

Scope

The purpose of this handbook is to assist users in diagnosing tree diseases and reducing their impact. Included are the most damaging diseases, along with some that are the subject of frequent inquiry although of minor importance. The diseases included were those encountered primarily on trees in conservation plantings such as windbreaks, farmstead plantings, …

Differential Effects Of Cdh23753a On Auditory And Vestibular Functional Aging In C57bl/6j Mice, Bruce E. Mock, Sarath Vijayakumar, Jessica Pierce, Timothy A. Jones, Sherri M. Jones

Department of Special Education and Communication Disorders: Faculty Publications

The C57BL/6J (B6) mouse strain carries a cadherin 23 mutation (Cdh23^753A, also known as Ahl), which affects inner ear structures and results in age-related hearing loss. The B6.CAST strain harbors the wild type Cdh23 gene, and hence, the influence of Ahl is absent. The purpose of the present study was to characterize the effect of age and gender on gravity receptor function in B6 and B6.CAST strains and to compare functional aging between auditory and vestibular modalities. Auditory sensitivity declined at significantly faster rates than gravity receptor sensitivity for both strains. Indeed, vestibular functional aging was …

Plant Community Shifts Caused By Feral Swine Rooting Devalue Florida Rangeland, Brittany Bankovich, Elizabeth Boughton, Raoul Boughton, Michael L. Avery, Samantha M. Wisely

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive species threaten agriculture by changing agroecosystem structure and function, reducing habitat value, decreasing biodiversity and ecosystem services and increasing management costs. Grazing lands in south central Florida are a mosaic of sown pastures, native grasslands, wetlands and woodlands that provide a variety of ecosystem services. Disturbance of these pastures and native grasslands by invasive feral swine (Sus scrofa) can have negative consequences for both economic productivity and biodiversity. In this study, we show that the effect of rooting on plant diversity depends on ecosystem type and initial levels of plant species diversity. For example, in native grassland pasture, rooting …

Chapter 8 Keeping Wildlife Out Of Your Food: Mitigation And Control Strategies To Reduce The Transmission Risk Of Food-Borne Pathogens, Alan B. Franklin, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

In this chapter, we provide a general framework for developing strategies to mitigate the contamination of agricultural operations with pathogens carried by wildlife. As part of this framework, we present adaptive management as a viable approach to developing these strategies to reduce the uncertainty over time as to whether management methods are being effective. We provide the general steps to developing an adaptive management strategies as well as generic mitigation methods that can be applied to agricultural operations as part of an adaptive management strategy.

Nutritional Effects On Reproductive Performance Of Captiveadult Female Coyotes (Canis Latrans), Eric M. Gese, Beth M. Roberts, Frederick F. Knowlton

United States Department of Agriculture Wildlife Services: Staff Publications

Interactions between animals and their environment are fundamental to ecological research. Field studies of coyote (Canis latrans) reproductive performance suggest mean litter size changes in response to prey abundance. However, this relationship has been assessed primarily by using carcasses collected from trappers. The objective of this study was to assess whether nutritional manipulation prior to mating affected reproduction in adult female coyotes. We examined the effects of caloric restriction during the 7 months prior to estrus on the reproductive rates of 11 captive female coyotes and the subsequent initial survival of pups through two reproductive cycles. This was …

Molecular Forensics In Avian Conservation: A Dna‑Based Approach For Identifying Mammalian Predators Of Ground‑Nesting Birds And Eggs, Matthew W. Hopken, Elizabeth K. Orning, Julie K. Young, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Background: The greater sage-grouse (Centrocercus urophasianus) is a ground-nesting bird from the Northern Rocky Mountains and a species at risk of extinction in in multiple U.S. states and Canada. Herein we report results from a proof of concept that mitochondrial and nuclear DNAs from mammalian predator saliva could be non-invasively collected from depredated greater sage-grouse eggshells and carcasses and used for predator species identification. Molecular forensic approaches have been applied to identify predators from depredated remains as one strategy to better understand predator–prey dynamics and guide management strategies. This can aid conservation efforts by correctly identifying predators most …

Estimates Of Small Indian Mongoose Densities: Implications For Rabies Management, Shylo R. Johnson, Are R. Berentsen, Christine Ellis, Amy Davis, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

The small Indian mongoose (Herpestes auropunctatus) is an invasive species and rabies reservoir in Puerto Rico. In the continental United States, terrestrial wildlife rabies is primarily managed by the National Rabies Management Program (NRMP) of the United States Department of Agriculture through oral rabies vaccination (ORV); the distribution of the vaccine baits is influenced by the population density of the target species. TheNRMPuses a density index for estimating raccoon (Procyon lotor) population density to guide bait distribution. In Puerto Rico, a wildlife rabies vaccination program does not exist and vaccination of domestic animals is limited and not compulsory. …

Bait Preference Of Free-Ranging Feral Swine For Delivery Of A Novel Toxicant, Nathan P. Snow, Joseph M. Halseth, Michael J. Lavelle, Thomas E. Hanson, Chad R. Blass, Justin A. Foster, Simon T. Humphrys, Linton D. Staples, David G. Hewitt, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive feral swine (Sus scrofa) cause extensive damage to agricultural and wildlife resources throughout the United States. Development of sodium nitrite as a new, orally delivered toxicant is underway to provide an additional tool to curtail growth and expansion of feral swine populations. A micro-encapsulation coating around sodium nitrite is used to minimize detection by feral swine and maximize stability for the reactive molecule. To maximize uptake of this toxicant by feral swine, development a bait matrix is needed to 1) protect the micro-encapsulation coating so that sodium nitrite remains undetectable to feral swine, 2) achieve a high …