Digital Commons Network^™

Reproductive Potential Of Snow And Tanner Crab In Alaska, Joel Benjamin Webb

Fisheries

Fisheries for snow (Chionoecetes opilio) and Tanner (C. bairdi) crab in Alaska are managed with large male only harvest regulations. Management of sex-selective crab fisheries could be enhanced by improved understanding of the functional relationship between male harvest and female reproductive potential. This research advances knowledge of factors associated with variation in reproductive potential by characterizing factors influencing female sperm reserves for Tanner crab, identifying factors associated with variability in fecundity for female snow crab in the eastern Bering Sea (EBS), and developing refined indices of egg (embryo) production and recruitment for snow crab that revealed a positive functional relationship …

A Qualitative Study Exploring The Perceptions Of Social Workers Concerning Independent Living Programs In Conjunction With Post-Secondary Education After New Jersey Foster Youth "Age-Out" Of The Foster Care System, Patrick L. Beatty

Seton Hall University Dissertations and Theses (ETDs)

The purpose of this research study is to investigate the perceptions of New Jersey social workers regarding potential barriers that may exist with foster care youth maturity development, independent living programs emphasizing foster care alumni post-secondary education achievement, and social worker departmental training relating to their understanding of independent living programs.

The design of this qualitative study focused on New Jersey Division of Children & Family volunteer participants consisting of three district office manager interviews, and three social worker focus group discussions from specific geographic locations throughout New Jersey. The interview and focus group questions were developed after comprehensive research …

Chancellor's Report 2014-12, John Pugh

Chancellor's Report

No abstract provided.

Chancellor's Philanthropy Report 2014 Winter, John Pugh

Chancellor's Report

No abstract provided.

Diversity, Abundance And Fate Of Ice Algae And Phytoplankton In The Bering Sea, Anna Szymanski

Marine Biology

Sea ice algae are an essential part of Arctic and subarctic ecosystems. They significantly contribute to total algal primary production, serve as an early spring food source for both pelagic and benthic biota, and can seed the spring phytoplankton bloom during periods of ice melt. In the subarctic Bering Sea, virtually nothing has been known about the composition of the ice algal community, its magnitude, and its connection to pelagic and benthic ecosystems. This study, therefore, focused on the diversity, abundance, and ultimate fate of ice algae in the Bering Sea using sea ice, water and sub-ice sediment trap samples …

Variability In Foraging By Humpback Whales (Megaptera Novaenangliae) On The Kodiak, Ak, Feeding Ground, Dana Louise Wright

Marine Biology

The North Pacific humpback whale (Megaptera novaeangliae) population has been growing rapidly following a moratorium on commercial whaling in 1986. Knowledge of humpback whale foraging on feeding grounds is becoming increasingly important as the growing population consumes more prey, including economically important commercial fishes. The goal of this thesis is to better understand how marine resources are shared among the growing humpback whale population and sympatric apex predators, including western Steller sea lions (SSLs; Eumetopias jubatus), on the Kodiak, AK, feeding ground. To address this, we explored spatial and temporal (inter-annual and within-feeding season) variability in summer foraging by humpback …

The Innovators: Entrepreneurs Earn Top Honors, Seed Dollars In N.H. Social Venture Innovation Challenge, Tracey Bentley

UNH Today Archive

No abstract provided.

Space Plants On Way Back To Earth, Edwin Smith

University of Mississippi News

Following six months aboard the International Space Station, UM researcher's experiment germinates

Landscape Of Transposable Elements In Mycosphaerella Graminicola, Braham Dhillon, Navdeep Gill, Richard Hamelin, Stephen Goodwin

Biology Faculty Articles

Background: In addition to gene identification and annotation, repetitive sequence analysis has become an integral part of genome sequencing projects. Identification of repeats is important not only because it improves gene prediction, but also because of the role that repetitive sequences play in determining the structure and evolution of genes and genomes. Several methods using different repeat-finding strategies are available for whole-genome repeat sequence analysis. Four independent approaches were used to identify and characterize the repetitive fraction of the Mycosphaerella graminicola (synonym Zymoseptoria tritici) genome. This ascomycete fungus is a wheat pathogen and its finished genome comprises 21 chromosomes, eight …

Silicon Doping Profile Measurement Using Terahertz Time Domain Spectroscopy, Chih-Yu Jen

Theses

Doping profiles in silicon greatly determine electrical performances of microelectronic devices and are frequently engineered to manipulate device properties. To support engineering studies afterward, essential information is usually required for physically characterized doping profiles.

Secondary ion mass spectrometry (SIMS), spreading resistance profiling (SRP) and electrochemical capacitance voltage (ECV) profiling are mainstream techniques for now to measure doping profiles destructively. SIMS produces a chemical doping profile through the ion sputtering process and owns a better characterization resolution. ECV and SPR, on the other hand, gauge an electrical doping profile from the free carrier detection in microelectronic devices. The major discrepancy between …

Host Genetics And Diet, But Not Immunoglobulin A Expression, Converge To Shape Compositional Features Of The Gut Microbiome In An Advanced Intercross Population Of Mice, Larry J. Leamy, Scott A. Kelly, Joseph Nietfeldt, Ryan M. Legge, Fangrui Ma, Kunjie Hua, Rohita Sinha, Daniel A. Peterson, Jens Walter, Andrew K. Benson, Daniel Pomp

Department of Food Science and Technology: Faculty Publications

Background: Individuality in the species composition of the vertebrate gut microbiota is driven by a combination of host and environmental factors that have largely been studied independently. We studied the convergence of these factors in a G₁₀ mouse population generated from a cross between two strains to search for quantitative trait loci (QTLs) that affect gut microbiota composition or ileal Immunoglobulin A (IgA) expression in mice fed normal or high-fat diets.

Results: We found 42 microbiota-specific QTLs in 27 different genomic regions that affect the relative abundances of 39 taxa, including four QTL that were shared between this G …

Fap206 Is A Microtubule-Docking Adapter For Ciliary Radial Spoke 2 And Dynein C, Krishna K. Vasudevan, Kangkang Song, Lea M. Alford, Winfield Sale, Erin E. Dymek, Elizabeth F. Smith, Todd Hennessey, Ewa Joachimiak, Paulina Urbanska, Dorota Wloga, William Dentler, Daniela Nicastro, Jacek Gaertig

Dartmouth Scholarship

Radial spokes are conserved macromolecular complexes that are essential for ciliary motility. A triplet of three radial spokes, RS1, RS2, and RS3, repeats every 96 nm along the doublet microtubules. Each spoke has a distinct base that docks to the doublet and is linked to different inner dynein arms. Little is known about the assembly and functions of individual radial spokes. A knockout of the conserved ciliary protein FAP206 in the ciliate Tetrahymena resulted in slow cell motility. Cryo–electron tomography showed that in the absence of FAP206, the 96-nm repeats lacked RS2 and dynein c. Occasionally, RS2 assembled but lacked …

Effect Of Allyl Isothiocyanate On Developmental Toxicity In Exposed Xenopus Laevis Embryos, John Russell Williams, James R. Rayburn, George R. Cline, Roger Sauterer, Mendel Friedman

Research, Publications & Creative Work

The pungent natural compound allyl isothiocyanate isolated from the seeds of Cru-ciferous (Brassica) plants such as mustard is reported to exhibit numerous beneficialhealth-promoting antimicrobial, antifungal, anticarcinogenic, cardioprotective, and neu-roprotective properties. Because it is also reported to damage DNA and is toxic to aquaticorganisms, the objective of the present study was to determine whether it possesses tera-togenic properties. The frog embryo teratogenesis assay-Xenopus (FETAX) was used todetermine the following measures of developmental toxicity of the allyl isothiocyanate:(a) 96-h LC50, defined as the median concentration causing 50% embryo lethality; (b) 96-h EC50, defined as the median concentration causing 50% malformations of the …

Effect Of Temperature On The Phenology Of Chilo Partellus (Swinhoe) (Lepidoptera, Crambidae); Simulation And Visualization Of The Potential Future Distribution Of C. Partellus In Africa Under Warmer Temperatures Through The Development Of Life-Table Parameters, N. Khadioli, Z. E.H. Tonnang, E. Muchugu, G. Ong'amo, T. Achia, I. Kipchirchir, J. Kroschel, B. Le Ru

All Peer-Reviewed Publications

Maize (Zea mays) is a major staple food in Africa. However, maize production is severely reduced by damage caused by feeding lepidopteran pests. In East and Southern Africa, Chilo partellus is one of the most damaging cereal stem borers mainly found in the warmer lowland areas. In this study, it was hypothesized that the future distribution and abundance of C. partellus may be affected greatly by the current global warming. The temperature-dependent population growth potential of C. partellus was studied on artificial diet under laboratory conditions at six constant temperatures (15, 18, 20, 25, 28, 30, 32 and 35 °C), …

Alaska Native Perceptions Of Food, Health, And Community Well-Being: Challenging Nutritional Colonialism, Melanie Lindholm

Arctic and Northern Studies

Alaska Native populations have undergone relatively rapid changes in nearly every aspect of life over the past half century. Overall lifestyles have shifted from subsistence-based to wage-based, from traditional to Western, and from self-sustainability to reliance on Outside sources. My research investigates the effects of these changes on health and well-being. The literature appears to lack concern for and documentation of Native peoples' perceptions of the changes in food systems and effects on their communities. Additionally, there is a lack of studies specific to Alaska Native individual perceptions of health and well-being. Therefore, my research aims to help identify social …

The Integrated Hydrologic And Societal Impacts Of A Warming Climate In Interior Alaska, Charles E. Jones

Engineering

In this dissertation, interdisciplinary research methods were used to examine how changes in hydrology associated with climate affect Alaskans. Partnerships were established with residents of Fairbanks and Tanana to develop scientific investigations relevant to rural Alaskans. In chapter 2, local knowledge was incorporated into scientific models to identify a socialecological threshold used to model potential driftwood harvest from the Yukon River. Anecdotal evidence and subsistence calendar records were combined with scientific data to model the harvest rates of driftwood. Modeling results estimate that between 1980 and 2010 hydrologic factors alone were responsible for a 29% decrease in the annual wood …

Rubber-Stamped Regulation: The Inadequate Oversight Of Genetically Engineered Plants And Animals In The United States, Genna Reed

Sustainable Development Law & Policy

No abstract provided.

Gender Role Behaviors And Attitudes In Hedwig And The Angry Inch, Richard Payton

ESSAI

No abstract provided.

Honorable Mentions: A Publication Of Psu Honors College, Honors College

Honorable Mentions

No abstract provided.

A Description Of Tolerance To Apical Meristem Damage In Wild Populations Of Arabidopsis Thaliana And Its Genetic Basis, Justin Dalrymple

Biology Theses

Since plants cannot actively avoid herbivory, they rely on two primary strategies to maintain their fitness in the face of herbivore pressure: resistance—the deterrence of herbivory via physical and chemical means—and tolerance—recuperation of aboveground mass after herbivory. Although diverse groups have been shown to be tolerant to herbivory, mechanisms of tolerance are not yet well known. There is also very little known about the ecological relevance of tolerance strategies in wild populations. In Arabidopsis thaliana, the apical meristem suppresses growth of axillary meristems to a high degree under normal conditions, but a number of axillary meristemswill grow after apical meristem …

Molecular-Like Hierarchical Self-Assembly Of Monolayers Of Mixtures Of Particles, P. Singh, Md. Shahadat Hossain, S. K. Gurupatham, K. Shah, E. Amah, D. Ju, M. Janjua, S. Nudurupati, I. Fischer

Publications and Research

We present a technique that uses an externally applied electric field to self-assemble monolayers of mixtures of particles into molecular-like hierarchical arrangements on fluid-liquid interfaces. The arrangements consist of composite particles (analogous to molecules) which are arranged in a pattern. The structure of a composite particle depends on factors such as the relative sizes of the particles and their polarizabilities, and the electric field intensity. If the particles sizes differ by a factor of two or more, the composite particle has a larger particle at its core and several smaller particles form a ring around it. The number of particles …

Potential Biogas Production On Livestock Operations, Mariana Baia

Op-Eds from ENSC230 Energy and the Environment: Economics and Policies

Potential Biogas Production on Livestock Operations

A New Species And Synonymy Of The Neotropical Eucelatoria Townsend And Redescription Of Myiodoriops Townsend, Diego J. Inclán, John O. Stireman Iii

Biological Sciences Faculty Publications

The New World tropics represents the most diverse region for tachinid parasitoids (Diptera: Tachinidae), but it also contains the most narrowly defined, and possibly the most confusing, tachinid genera of any biogeographic region. This over-splitting of genera and taxonomic confusion has limited progress toward our understanding the family in this region and much work is needed to revise, redefine, and make sense of the profusion of finely split taxa. In a recent analysis of the Neotropical genus Erythromelana Townsend, two species previously assigned to this genus, Euptilodegeeria obumbrata (Wulp) and Myiodoriops marginalis Townsend were reinstated as monotypic genera. In the …

Professional Learning And Lean Manufacturing, Parker Grant

Doctoral Dissertations

Global competition and a down-sized labor force require manufacturers to use lean manufacturing practices. Current professional development models, however, are suboptimal in guiding efforts of first line supervisors to help workers improve their skills in solving manufacturing problems. This study employed an interpretive qualitative research methodology to explore what supervisors and workers experienced as the key factors that helped workers learn how to use lean manufacturing practices. Eight individuals who worked in an aerospace manufacturing plant located in the northeast United States participated in the study. Six of the participants were first line supervisors and two were first-line workers. Data …

Rapid, Photoinduced Electron Transfer-Modulated, Turn-On Fluorescent Probe For Detection And Cellular Imaging Of Biologically Significant Thiols, Rasika R. Nawimanage, Bijeta Prasai, Suraj U. Hettiarachchi, Robin L. Mccarley

Faculty Publications

© 2014 American Chemical Society. There is a very limited number of existing probes whose fluorescence is turned on in the presence of the class of biological thiols made up of glutathione, cysteine, and homocysteine. The extant probes for this class of biological thiols commonly have poor aqueous solubility and long analyte response times, and they demand a very high probe/thiol ratio for decreased time of significant reporter signal generation; knowledge regarding their selectivity with respect to other sulfur-based analytes is unclear. Described here is a previously unreported photoinduced electron-transfer-quenched probe (HMBQ-Nap 1) that offers highly selective and rapid in …

Research Request: Mission Statements Of Urban Serving Universities, Strategic Planning Development Team

Resource Archive

The Strategic Planning Development Team was tasked with gathering, sorting and presenting in various modes the Mission statements of the membership of the Coalition of Urban Serving Universities and PSU’s OUS peer group. This report compiles these into one document, and also summarizes the data in word clouds. Finally, the first draft of PSU's vision statement is presented, with representative mission statements thought by Coraggio Group to be suitable for PSU.

Contributions Of Unique Active Site Residues Of Eukaryotic Udp-Galactopyranose Mutases To Substrate Recognition And Active Site Dynamics, Isabel Da Fonseca, Insaf A. Qureshi, Ritcha Mehra-Chaudhary, Karina Kizjakina, John J. Tanner, Pablo Sobrado

Chemistry Faculty Research & Creative Works

UDP-glucopyranose mutase (UGM) catalyzes the interconversion between UDP-galactopyranose and UDP-galactofuranose. Absent in humans, galactofuranose is found in bacterial and fungal cell walls and is a cell surface virulence factor in protozoan parasites. For these reasons, UGMs are targets for drug discovery. Here, we report a mutagenesis and structural study of the UGMs from Aspergillus fumigatus and Trypanosoma cruzi focused on active site residues that are conserved in eukaryotic UGMs but are absent or different in bacterial UGMs. Kinetic analysis of the variants F66A, Y104A, Q107A, N207A, and Y317A (A. fumigatus numbering) show decreases in kcat/KM values of 200-1000-fold for the …

Annual Report: 2013, N/A N/A

Annual Reports

I submit herewith the annual reports from the Agricultural and Forestry Experiment Station, School of Natural Resources and Agricultural Sciences, University of Alaska Fairbanks, for the period ending December 31, 2013. This is done in accordance with an act of Congress, approved March 2, 1887, entitled, “An act to establish agricultural experiment stations, in connection with the agricultural college established in the several states under the provisions of an act approved July 2, 1862, and under the acts supplementary thereto,” and also of the act of the Alaska Territorial Legislature, approved March 12, 1935, accepting the provisions of the act …

Co-Targeting Of Aurora A Kinase And Lim Kinase 1 For Cancer Therapy, Ratna Chakrabarti

UCF Patents

Despite recent advances in development of improved cancer therapeutics one of the many clinical challenges is that patients often show resistance to cancer drugs. This invention provides evidence that an alternate method of treatment of cancer could be adopted for improved efficacy of existing therapies and /or treatment of drug resistant cancers. This study describes a novel functional relationship between two proteins that regulate proliferation of cells. Because these proteins are involved in cell growth, the amounts of these proteins are tightly regulated in normal cells however in cancer cells, abnormally increased amounts of these proteins are noted. One of …

Systems Biology Investigation Of Camp Modulation To Increase Smn Levels For The Treatment Of Spinal Muscular Atrophy., Sean G Mack, Daniel J Cook, Prasad Dhurjati, Matthew E R Butchbach

Department of Pediatrics Faculty Papers

Spinal muscular atrophy (SMA), a leading genetic cause of infant death worldwide, is an autosomal recessive disorder caused by the loss of SMN1 (survival motor neuron 1), which encodes the protein SMN. The loss of SMN1 causes a deficiency in SMN protein levels leading to motor neuron cell death in the anterior horn of the spinal cord. SMN2, however, can also produce some functional SMN to partially compensate for loss of SMN1 in SMA suggesting increasing transcription of SMN2 as a potential therapy to treat patients with SMA. A cAMP response element was identified on the SMN2 promoter, implicating cAMP …